New frontiers in translational control of the cancer genome
Open accessAbstract
The past several years have seen dramatic leaps in our understanding of how gene expression is rewired at the translation level during tumorigenesis to support the transformed phenotype. This work has been driven by an explosion in technological advances and is revealing previously unimagined regulatory mechanisms that dictate functional expression of the cancer genome. In this Review we discuss emerging trends and exciting new discoveries that reveal how this translational circuitry contributes to specific aspects of tumorigenesis and cancer cell function, with a particular focus on recent insights into the role of translational control in the adaptive response to oncogenic stress conditions.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Translational control plays a critical role in all steps of cancer progression.
“Translational control plays a critical role in all steps of cancer progression, and most oncogenic signaling pathways converge to enhance the translational capacity of tumor cells (30–32).”
From Apolipoprotein E2 Stimulates Protein Synthesis and Promotes Melanoma Progression and Metastasis (2023) · cites this paper as [30]
Most oncogenic signaling pathways converge to enhance the translational capacity of tumor cells.
“Translational control plays a critical role in all steps of cancer progression, and most oncogenic signaling pathways converge to enhance the translational capacity of tumor cells (30–32).”
From Apolipoprotein E2 Stimulates Protein Synthesis and Promotes Melanoma Progression and Metastasis (2023) · cites this paper as [30]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
1 retracted
Shi, Y., Yang, Y., Hoang, B. Q., Bardeleben, C., Holmes, B., Gera, J., & Lichtenstein, A. K. (2015) · Oncogene · doi:10.1038/onc.2015.156 · Cited by 68 · see citing works
RetractedRepertoires of Autophagy in the Pathogenesis of Ocular Diseases
Li, Y., Jiang, Q. L., Cao, G.-F., Yao, J., & Yan, B. (2015) · Cellular Physiology and Biochemistry · doi:10.1159/000373980 · Cited by 16,351 · see citing works
MicroRNA expression profiles classify human cancers
Lü, J., Getz, G. A., Miska, E. A., Alvarez-Saavedra, E., Lamb, J., Peck, D., Sweet-Cordero, A., Ebert, B. L., Mak, R. H., Ferrando, A. A., et al. (2005) · Nature · doi:10.1038/nature03702 · Cited by 9,497 · see citing works
The Unfolded Protein Response: From Stress Pathway to Homeostatic Regulation
Walter, P., & Ron, D. (2011) · Science · doi:10.1126/science.1209038 · Cited by 5,893 · see citing works
An analysis of 5'-noncoding sequences from 699 vertebrate messenger RNAs
Kozak, M. (1987) · Nucleic Acids Research · doi:10.1093/nar/15.20.8125 · Cited by 5,090 · see citing works
Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq
Dominissini, D., Moshitch-Moshkovitz, S., Schwartz, S., Salmon-Divon, M., Ungar, L., Osenberg, S., Cesarkas, K., Jacob-Hirsch, J., Amariglio, N., Kupiec, M., et al. (2012) · Nature · doi:10.1038/nature11112 · Cited by 4,884 · see citing works
Comprehensive Analysis of mRNA Methylation Reveals Enrichment in 3′ UTRs and near Stop Codons
Meyer, K. D., Saletore, Y., Zumbo, P., Elemento, O., Mason, C. E., & Jaffrey, S. R. (2012) · Cell · doi:10.1016/j.cell.2012.05.003 · Cited by 4,223 · see citing works
Insights into the regulation of protein abundance from proteomic and transcriptomic analyses
Vogel, C., & Marcotte, E. M. (2012) · Nature Reviews Genetics · doi:10.1038/nrg3185 · Cited by 4,195 · see citing works
mTOR: from growth signal integration to cancer, diabetes and ageing
Zoncu, R., Efeyan, A., & Sabatini, D. M. (2011) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm3025 · Cited by 3,941 · see citing works
Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling
Ingolia, N. T., Ghaemmaghami, S., Newman, J. R. S., & Weissman, J. S. (2009) · Science · doi:10.1126/science.1168978 · Cited by 3,853 · see citing works
RAS Is Regulated by the let-7 MicroRNA Family
Johnson, S., Großhans, H., Shingara, J., Byrom, M., JARVIS, R., Cheng, A., Labourier, E., Reinert, K. L., Brown, D., & Slack, F. J. (2005) · Cell · doi:10.1016/j.cell.2005.01.014 · Cited by 3,662 · see citing works
Modulation of oxidative stress as an anticancer strategy
Gorrini, C., Harris, I. S., & Mak, T. W. (2013) · Nature Reviews Drug Discovery · doi:10.1038/nrd4002 · Cited by 3,579 · see citing works
An Integrated Stress Response Regulates Amino Acid Metabolism and Resistance to Oxidative Stress
Harding, H. P., Zhang, Y., Zeng, H., Novoa, I., Lu, P. D., Calfon, M. A., Sadri, N., Yun, C., Popko, B., Paules, R. S., et al. (2003) · Molecular Cell · doi:10.1016/s1097-2765(03)00105-9 · Cited by 3,336 · see citing works
Regulation of Translation Initiation in Eukaryotes: Mechanisms and Biological Targets
Sonenberg, N., & Hinnebusch, A. G. (2009) · Cell · doi:10.1016/j.cell.2009.01.042 · Cited by 3,304 · see citing works
Transcriptome-wide Identification of RNA-Binding Protein and MicroRNA Target Sites by PAR-CLIP
Hafner, M., Landthaler, M., Burger, L., Khorshid, M., Hausser, J., Berninger, P., Rothballer, A., Ascano, M., Jungkamp, A.-C., Munschauer, M., et al. (2010) · Cell · doi:10.1016/j.cell.2010.03.009 · Cited by 2,873 · see citing works
The Rag GTPases Bind Raptor and Mediate Amino Acid Signaling to mTORC1
Sancak, Y., Peterson, T. R., Shaul, Y. D., Lindquist, R. A., Thoreen, C. C., Bar-Peled, L., & Sabatini, D. M. (2008) · Science · doi:10.1126/science.1157535 · Cited by 2,773 · see citing works
Characterization of Mammalian Selenoproteomes
Kryukov, G. V., Castellano, S., Novoselov, S. V., Lobanov, A. V., Zehtab, O., Guigó, R., & Gladyshev, V. N. (2003) · Science · doi:10.1126/science.1083516 · Cited by 2,353 · see citing works
Ingolia, N. T., Lareau, L. F., & Weissman, J. S. (2011) · Cell · doi:10.1016/j.cell.2011.10.002 · Cited by 2,187 · see citing works
Insights into RNA Biology from an Atlas of Mammalian mRNA-Binding Proteins
Castello, A., Fischer, B., Eichelbaum, K., Horos, R., Beckmann, B. M., Strein, C., Davey, N. E., Humphreys, D. T., Preiss, T., Steinmetz, L. M., et al. (2012) · Cell · doi:10.1016/j.cell.2012.04.031 · Cited by 2,132 · see citing works
A census of human RNA-binding proteins
Gerstberger, S., Hafner, M., & Tuschl, T. (2014) · Nature Reviews Genetics · doi:10.1038/nrg3813 · Cited by 2,032 · see citing works
Towards a molecular understanding of microRNA-mediated gene silencing
Jonas, S., & Izaurralde, E. (2015) · Nature Reviews Genetics · doi:10.1038/nrg3965 · Cited by 1,872 · see citing works
5′ UTR m6A Promotes Cap-Independent Translation
Meyer, K. D., Patil, D. P., Zhou, J. L., Zinoviev, A., Skabkin, M. A., Elemento, O., Pestova, T. V., Qian, S., & Jaffrey, S. R. (2015) · Cell · doi:10.1016/j.cell.2015.10.012 · Cited by 1,812 · see citing works
Thoreen, C. C., Kang, S. A., Chang, J. W., Liu, Q., Zhang, J., Gao, Y., Reichling, L. J., Sim, T., Sabatini, D. M., & Gray, N. S. (2009) · Journal of Biological Chemistry · doi:10.1074/jbc.m900301200 · Cited by 1,803 · see citing works
Principles of cancer therapy: oncogene and non-oncogene addiction
Luo, J., Solimini, N. L., & Elledge, S. J. (2009) · Cell · doi:10.1016/j.cell.2009.02.024 · Cited by 1,765 · see citing works
Reinitiation involving upstream ORFs regulates <i>ATF4</i> mRNA translation in mammalian cells
Vattem, K. M., & Wek, R. C. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0400541101 · Cited by 1,696 · see citing works
Mitochondrial ROS in cancer: initiators, amplifiers or an Achilles' heel?
Sabharwal, S. S., & Schumacker, P. T. (2014) · Nature reviews. Cancer · doi:10.1038/nrc3803 · Cited by 1,643 · see citing works
Mayr, C., & Bartel, D. P. (2009) · Cell · doi:10.1016/j.cell.2009.06.016 · Cited by 1,613 · see citing works
A compendium of RNA-binding motifs for decoding gene regulation
Ray, D., Kazan, H., Cook, K. B., Weirauch, M. T., Najafabadi, H. S., Li, X., Gueroussov, S., Albu, M., Zheng, H., Yang, A., et al. (2013) · Nature · doi:10.1038/nature12311 · Cited by 1,480 · see citing works
A unifying model for mTORC1-mediated regulation of mRNA translation
Thoreen, C. C., Chantranupong, L., Keys, H. R., Wang, T., Gray, N. S., & Sabatini, D. M. (2012) · Nature · doi:10.1038/nature11083 · Cited by 1,477 · see citing works
RNA‐binding proteins and post‐transcriptional gene regulation
Glisovic, T., Bachorik, J. L., Yong, J., & Dreyfuss, G. (2008) · FEBS Letters · doi:10.1016/j.febslet.2008.03.004 · Cited by 1,398 · see citing works
Brugarolas, J., Lei, K., Hurley, R. L., Manning, B. D., Reiling, J. H., Hafen, E., Witters, L. A., Ellisen, L. W., & Kaelin, W. G. (2004) · Genes & Development · doi:10.1101/gad.1256804 · Cited by 1,384 · see citing works
HITS-CLIP yields genome-wide insights into brain alternative RNA processing
Licatalosi, D. D., Mele, A., Fak, J. J., Ule, J., Kayikci, M., Chi, S. W., Clark, T. A., Schweitzer, A. C., Blume, J. E., Wang, X., et al. (2008) · Nature · doi:10.1038/nature07488 · Cited by 1,352 · see citing works
Sandberg, R., Neilson, J. R., Sarma, A., Sharp, P. A., & Burge, C. B. (2008) · Science · doi:10.1126/science.1155390 · Cited by 1,349 · see citing works
The translational landscape of mTOR signalling steers cancer initiation and metastasis
Hsieh, A. C., Liu, Y., Edlind, M. P., Ingolia, N. T., Janes, M. R., Sher, A., Shi, E. Y., Stumpf, C. R., Christensen, C., Bonham, M. J., et al. (2012) · Nature · doi:10.1038/nature10912 · Cited by 1,313 · see citing works
Self-citationDynamic m6A mRNA methylation directs translational control of heat shock response
Zhou, J. L., Wan, J., Gao, X., Zhang, X., Jaffrey, S. R., & Qian, S. (2015) · Nature · doi:10.1038/nature15377 · Cited by 1,228 · see citing works
The mRNA-Bound Proteome and Its Global Occupancy Profile on Protein-Coding Transcripts
Baltz, A. G., Munschauer, M., Schwanhäußer, B., Vasile, A. I., Murakawa, Y., Schueler, M., Youngs, N., Penfold-Brown, D., Drew, K., Milek, M., et al. (2012) · Molecular Cell · doi:10.1016/j.molcel.2012.05.021 · Cited by 1,175 · see citing works
The Xist lncRNA interacts directly with SHARP to silence transcription through HDAC3
McHugh, C. A., Chen, C., Chow, A. Y., Surka, C., Tran, C., McDonel, P. E., Pandya‐Jones, A., Blanco, M. R., Burghard, C. P., Moradian, A., et al. (2015) · Nature · doi:10.1038/nature14443 · Cited by 1,163 · see citing works
iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution
König, J., Zarnack, K., Rot, G., Curk, T., Kayikci, M., Zupan, B., Turner, D. J., Luscombe, N. M., & Ule, J. (2010) · Nature Structural & Molecular Biology · doi:10.1038/nsmb.1838 · Cited by 1,126 · see citing works
Systematic Discovery of Xist RNA Binding Proteins
Chu, C., Zhang, Q. C., da Rocha, S. T., Flynn, R. A., Bharadwaj, M. C., Calabrese, J. M., Magnuson, T., Heard, É., & Chang, H. Y. (2015) · Cell · doi:10.1016/j.cell.2015.03.025 · Cited by 1,103 · see citing works
Active-Site Inhibitors of mTOR Target Rapamycin-Resistant Outputs of mTORC1 and mTORC2
Feldman, M. E., Apsel, B., Uotila, A., Loewith, R., Knight, Z. A., Ruggero, D., & Shokat, K. M. (2009) · PLoS Biology · doi:10.1371/journal.pbio.1000038 · Cited by 1,080 · see citing works
Self-citationGaillard, H., García‐Muse, T., & Aguilera, A. (2015) · Nature reviews. Cancer · doi:10.1038/nrc3916 · Cited by 1,077 · see citing works
Widespread occurrence of 5-methylcytosine in human coding and non-coding RNA
Squires, J. E., Patel, H. R., Nousch, M., Sibbritt, T., Humphreys, D. T., Parker, B. J., Suter, C. M., & Preiß, T. (2012) · Nucleic Acids Research · doi:10.1093/nar/gks144 · Cited by 1,011 · see citing works
Pseudouridine profiling reveals regulated mRNA pseudouridylation in yeast and human cells
Carlile, T. M., Rojas-Durán, M. F., Zinshteyn, B., Shin, H., Bartoli, K. M., & Gilbert, W. V. (2014) · Nature · doi:10.1038/nature13802 · Cited by 1,004 · see citing works
Transcriptome-wide Mapping Reveals Widespread Dynamic-Regulated Pseudouridylation of ncRNA and mRNA
Schwartz, S., Bernstein, D. A., Mumbach, M. R., Jovanović, M., Herbst, R. H., León-Ricardo, B. X., Engreitz, J., Guttman, M., Satija, R., Lander, E. S., et al. (2014) · Cell · doi:10.1016/j.cell.2014.08.028 · Cited by 988 · see citing works
Malignant transformation by a eukaryotic initiation factor subunit that binds to mRNA 5' cap
Lazaris-Karatzas, A., Montine, K. S., & Sonenberg, N. (1990) · Nature · doi:10.1038/345544a0 · Cited by 965 · see citing works
Mitogen‐activated protein kinases activate the serine/threonine kinases Mnk1 and Mnk2
Waskiewicz, A. J., Flynn, A., Proud, C. G., & Cooper, J. A. (1997) · The EMBO Journal · doi:10.1093/emboj/16.8.1909 · Cited by 951 · see citing works
A large-scale analysis of mRNA polyadenylation of human and mouse genes
Tian, B. (2005) · Nucleic Acids Research · doi:10.1093/nar/gki158 · Cited by 944 · see citing works
Calvo, S. E., Pagliarini, D. J., & Mootha, V. K. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0810916106 · Cited by 914 · see citing works
miRNA-Mediated Gene Silencing by Translational Repression Followed by mRNA Deadenylation and Decay
Djuranović, S., Nahvi, A., & Green, R. (2012) · Science · doi:10.1126/science.1215691 · Cited by 866 · see citing works
Regulation of elongation factor 2 kinase by p90RSK1 and p70 S6 kinase
Wang, X.-M., Li, W., Williams, M. R., Terada, N., Alessi, D., & Proud, C. G. (2001) · EMBO Journal · doi:10.1093/emboj/20.16.4370 · Cited by 862 · see citing works
PKR; a sentinel kinase for cellular stress
Williams, B. R. (1999) · Oncogene · doi:10.1038/sj.onc.1203127 · Cited by 820 · see citing works
Translational control in cancer
Silvera, D., Formenti, S. C., & Schneider, R. J. (2010) · Nature reviews. Cancer · doi:10.1038/nrc2824 · Cited by 820 · see citing works
Alternative cleavage and polyadenylation: extent, regulation and function
Elkon, R., Ugalde, A. P., & Agami, R. (2013) · Nature Reviews Genetics · doi:10.1038/nrg3482 · Cited by 805 · see citing works
Targeting the translation machinery in cancer
Bhat, M., Robichaud, N., Hulea, L., Sonenberg, N., Pelletier, J., & Topisirovic, I. (2015) · Nature Reviews Drug Discovery · doi:10.1038/nrd4505 · Cited by 799 · see citing works
Genome-wide measurement of RNA secondary structure in yeast
Kertesz, M., Wan, Y., Mazor, E., Rinn, J. L., Nutter, R. C., Chang, H. Y., & Segal, E. (2010) · Nature · doi:10.1038/nature09322 · Cited by 765 · see citing works
tRNA biology charges to the frontPreprint
Phizicky, E. M., & Hopper, A. K. (2010) · Genes & Development · doi:10.1101/gad.1956510 · Cited by 764 · see citing works
Extensive post-transcriptional regulation of microRNAs and its implications for cancer
Thomson, J. M., Newman, M., Parker, J. S., Morin-Kensicki, E. M., Wright, T., & Hammond, S. M. (2006) · Genes & Development · doi:10.1101/gad.1444406 · Cited by 755 · see citing works
Structural imprints in vivo decode RNA regulatory mechanisms
Spitale, R. C., Flynn, R. A., Zhang, Q. C., Crisalli, P., Lee, B., Jung, J., Kuchelmeister, H. Y., Batista, P. J., Torre, E. A., Kool, E. T., et al. (2015) · Nature · doi:10.1038/nature14263 · Cited by 745 · see citing works
Pende, M., Um, S. H., Mieulet, V., Sticker, M., Goss, V. L., Mestan, J., Mueller, M., Fumagalli, S., Kozma, S. C., & Thomas, G. (2004) · Molecular and Cellular Biology · doi:10.1128/mcb.24.8.3112-3124.2004 · Cited by 743 · see citing works
The Functions of MicroRNAs: mRNA Decay and Translational Repression
Iwakawa, H., & Tomari, Y. (2015) · Trends in Cell Biology · doi:10.1016/j.tcb.2015.07.011 · Cited by 732 · see citing works
S6K1- and ßTRCP-Mediated Degradation of PDCD4 Promotes Protein Translation and Cell Growth
Dorrello, N. V., Peschiaroli, A., Guardavaccaro, D., Colburn, N. H., Sherman, N. E., & Pagano, M. (2006) · Science · doi:10.1126/science.1130276 · Cited by 731 · see citing works
Ribosome Profiling Shows That miR-430 Reduces Translation Before Causing mRNA Decay in Zebrafish
Bazzini, A. A., Lee, M. T., & Giraldez, A. J. (2012) · Science · doi:10.1126/science.1215704 · Cited by 709 · see citing works
Influences of mRNA secondary structure on initiation by eukaryotic ribosomes.
Kozak, M. (1986) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.83.9.2850 · Cited by 687 · see citing works
Specialized ribosomes: a new frontier in gene regulation and organismal biology
Xue, S., & Barna, M. (2012) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm3359 · Cited by 687 · see citing works
Poly(A)-tail profiling reveals an embryonic switch in translational control
Subtelny, A. O., Eichhorn, S. W., Chen, G. R., Sive, H., & Bartel, D. P. (2014) · Nature · doi:10.1038/nature13007 · Cited by 664 · see citing works
c-Myc binds to human ribosomal DNA and stimulates transcription of rRNA genes by RNA polymerase I
Grandori, C., Gomez-Roman, N., Felton-Edkins, Z. A., Ngouenet, C., Galloway, D. A., Eisenman, R. N., & White, R. J. (2005) · Nature Cell Biology · doi:10.1038/ncb1224 · Cited by 659 · see citing works
Ribosome Profiling Reveals Pervasive Translation Outside of Annotated Protein-Coding Genes
Ingolia, N. T., Brar, G. A., Stern‐Ginossar, N., Harris, M. S., Talross, G. J. S., Jackson, S. E., Wills, M. R., & Weissman, J. S. (2014) · Cell Reports · doi:10.1016/j.celrep.2014.07.045 · Cited by 644 · see citing works
Ribosomal protein S6 phosphorylation is a determinant of cell size and glucose homeostasisPreprint
Ruvinsky, I., Sharon, N., Lerer, T., Cohen, H., Stolovich-Rain, M., Nir, T., Dor, Y., Zisman, P., & Meyuhas, O. (2005) · Genes & Development · doi:10.1101/gad.351605 · Cited by 640 · see citing works
MicroRNA Inhibition of Translation Initiation in Vitro by Targeting the Cap-Binding Complex eIF4F
Mathonnet, G., Fabian, M., Svitkin, Y., Parsyan, A., Huck, L., Murata, T., Biffo, S., Merrick, W., Darżynkiewicz, E., Pillai, R., et al. (2007) · Science · doi:10.1126/science.1146067 · Cited by 636 · see citing works
RNA G-quadruplexes cause eIF4A-dependent oncogene translation in cancer
Wolfe, A. L., Singh, K., Zhong, Y., Drewe, P., Rajasekhar, V. K., Sanghvi, V. R., Mavrakis, K. J., Jiang, M., Roderick, J. E., Van der Meulen, J., et al. (2014) · Nature · doi:10.1038/nature13485 · Cited by 635 · see citing works
Bidirectional RNA Helicase Activity of Eucaryotic Translation Initiation Factors 4A and 4F
Rozen, F., Edery, I., Meerovitch, K., Dever, T. E., Merrick, W. C., & Sonenberg, N. (1990) · Molecular and Cellular Biology · doi:10.1128/mcb.10.3.1134 · Cited by 632 · see citing works
Rapamycin selectively represses translation of the "polypyrimidine tract" mRNA family.
Jefferies, H. B. J., Reinhard, C., Kozma, S. C., & Thomas, G. (1994) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.91.10.4441 · Cited by 623 · see citing works
Drygin, D., Lin, A. H., Bliesath, J., Ho, C., O’Brien, S., Proffitt, C., Omori, M., Haddach, M., Schwaebe, M. K., Siddiqui-Jain, A., et al. (2010) · Cancer Research · doi:10.1158/0008-5472.can-10-1728 · Cited by 622 · see citing works
Haghighat, A., Mader, S., Pause, A., & Sonenberg, N. (1995) · The EMBO Journal · doi:10.1002/j.1460-2075.1995.tb00257.x · Cited by 615 · see citing works
Pelletier, J., & Sonenberg, N. (1985) · Cell · doi:10.1016/0092-8674(85)90200-4 · Cited by 610 · see citing works
Tissue-Specific Differences in Human Transfer RNA Expression
Dittmar, K. A., Goodenbour, J. M., & Pan, T. (2006) · PLoS Genetics · doi:10.1371/journal.pgen.0020221 · Cited by 601 · see citing works
Global mapping of translation initiation sites in mammalian cells at single-nucleotide resolution
Lee, S., Liu, B., Lee, S., Huang, S., Shen, B., & Qian, S. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1207846109 · Cited by 595 · see citing works
The translation factor eIF-4E promotes tumor formation and cooperates with c-Myc in lymphomagenesis
Ruggero, D., Montanaro, L., Ma, L., Xu, W. G., Londei, P., Cordon‐Cardo, C., & Pandolfi, P. P. (2004) · Nature Medicine · doi:10.1038/nm1042 · Cited by 592 · see citing works
Self-citationRibosome-Mediated Specificity in Hox mRNA Translation and Vertebrate Tissue Patterning
Kondrashov, N., Pusic, A. D., Stumpf, C. R., Shimizu, K., Hsieh, A. C., Xue, S., Ishijima, J., Shiroishi, T., & Barna, M. (2011) · Cell · doi:10.1016/j.cell.2011.03.028 · Cited by 581 · see citing works
Hussain, S., Sajini, A. A., Blanco, S., Dietmann, S., Lombard, P., Sugimoto, Y., Paramor, M., Gleeson, J. G., Odom, D. T., Ule, J., et al. (2013) · Cell Reports · doi:10.1016/j.celrep.2013.06.029 · Cited by 569 · see citing works
Bywater, M. J., Poortinga, G., Sanij, E., Hein, N., Peck, A., Cullinane, C. M., Wall, M., Cluse, L. A., Drygin, D., Anderes, K. L., et al. (2012) · Cancer Cell · doi:10.1016/j.ccr.2012.05.019 · Cited by 561 · see citing works
Chemical pulldown reveals dynamic pseudouridylation of the mammalian transcriptome
Li, X., Zhu, P., Ma, S., Song, J., Bai, J., Sun, F., & Yi, C. (2015) · Nature Chemical Biology · doi:10.1038/nchembio.1836 · Cited by 554 · see citing works
Folding of an intrinsically disordered protein by phosphorylation as a regulatory switch
Bah, A., Vernon, R. M., Siddiqui, Z., Krzeminski, M., Muhandiram, R., Zhao, C. W., Sonenberg, N., Kay, L. E., & Forman-Kay, J. D. (2014) · Nature · doi:10.1038/nature13999 · Cited by 554 · see citing works
Efficient and quantitative high-throughput tRNA sequencing
Zheng, G., Qin, Y., Clark, W. C., Dai, Q., Yi, C., He, C., Lambowitz, A. M., & Pan, T. (2015) · Nature Methods · doi:10.1038/nmeth.3478 · Cited by 550 · see citing works
Dong, J., Qiu, H., Garcia-Barrio, M., Anderson, J., & Hinnebusch, A. G. (2000) · Molecular Cell · doi:10.1016/s1097-2765(00)00028-9 · Cited by 545 · see citing works
eIF4E phosphorylation promotes tumorigenesis and is associated with prostate cancer progression
Furic, L., Rong, L., Larsson, O. S., Koumakpayi, I. H., Yoshida, K., Brueschke, A., Petroulakis, E., Robichaud, N., Pollak, M., Gaboury, L. A., et al. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1005320107 · Cited by 528 · see citing works
Mayer, C., Zhao, J., Yuan, X., & Grummt, I. (2004) · Genes & Development · doi:10.1101/gad.285504 · Cited by 506 · see citing works
Eichhorn, S. W., Guo, H., McGeary, S. E., Rodríguez‐Mias, R. A., Shin, C., Baek, D., Hsu, S., Ghoshal, K., Villén, J., & Bartel, D. P. (2014) · Molecular Cell · doi:10.1016/j.molcel.2014.08.028 · Cited by 491 · see citing works
A Dual Program for Translation Regulation in Cellular Proliferation and Differentiation
Gingold, H., Tehler, D., Christoffersen, N. R., Nielsen, M. M., Asmar, F., Kooistra, S. M., Christophersen, N. S., Christensen, L. L., Borre, M., Sørensen, K. D., et al. (2014) · Cell · doi:10.1016/j.cell.2014.08.011 · Cited by 487 · see citing works
Identification of direct targets and modified bases of RNA cytosine methyltransferases
Khoddami, V., & Cairns, B. R. (2013) · Nature Biotechnology · doi:10.1038/nbt.2566 · Cited by 484 · see citing works
Duncan, R., Milburn, S. C., & Hershey, J. W. B. (1987) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)75938-9 · Cited by 483 · see citing works
Cozen, A. E., Quartley, E., Holmes, A. D., Hrabeta-Robinson, E., Phizicky, E. M., & Lowe, T. M. (2015) · Nature Methods · doi:10.1038/nmeth.3508 · Cited by 479 · see citing works
Svitkin, Y. V., Pause, A., Haghighat, A., Pyronnet, S., Witherell, G. W., Belsham, G. J., & Sonenberg, N. (2001) · RNA · doi:10.1017/s135583820100108x · Cited by 477 · see citing works
Hannan, K., Brandenburger, Y., Jenkins, A., Sharkey, K., Cavanaugh, A., Rothblum, L., Moss, T., Poortinga, G., McArthur, G., Pearson, R., et al. (2003) · Molecular and Cellular Biology · doi:10.1128/mcb.23.23.8862-8877.2003 · Cited by 473 · see citing works
Phosphorylation of eucaryotic translation initiation factor 4B Ser422 is modulated by S6 kinases
Raught, B., Peiretti, F., Gingras, A., Livingstone, M., Shahbazian, D., Mayeur, G. L., Polakiewicz, R. D., Sonenberg, N., & Hershey, J. W. B. (2004) · The EMBO Journal · doi:10.1038/sj.emboj.7600193 · Cited by 473 · see citing works
c-Myc associates with ribosomal DNA and activates RNA polymerase I transcription
Arabi, A., Wu, S., Ridderstråle, K., Bierhoff, H., Shiue, C.-N., Fátyol, K., Fahlén, S., Hydbring, P., Söderberg, O., Grummt, I., et al. (2005) · Nature Cell Biology · doi:10.1038/ncb1225 · Cited by 471 · see citing works
A Quantitative Systems Approach Reveals Dynamic Control of tRNA Modifications during Cellular Stress
Chan, C. T. Y., Dyavaiah, M., DeMott, M. S., Taghizadeh, K., Dedon, P. C., & Begley, T. J. (2010) · PLoS Genetics · doi:10.1371/journal.pgen.1001247 · Cited by 466 · see citing works
Hsieh, A. C., Costa, M. D., Zollo, O., Davis, C. B., Feldman, M. E., Testa, J. R., Meyuhas, O., Shokat, K. M., & Ruggero, D. (2010) · Cancer Cell · doi:10.1016/j.ccr.2010.01.021 · Cited by 464 · see citing works
Self-citationPhosphorylation of elongation factor 2 by EF-2 kinase affects rate of translation
Ryazanov, A. G., Shestakova, E. A., & Natapov, P. G. (1988) · Nature · doi:10.1038/334170a0 · Cited by 459 · see citing works
The RNA-binding protein repertoire of embryonic stem cells
Kwon, S. C., Yi, H., Eichelbaum, K., Föehr, S., Fischer, B., You, K. T., Castelló, A., Krijgsveld, J., Hentze, M. W., & Kim, V. N. (2013) · Nature Structural & Molecular Biology · doi:10.1038/nsmb.2638 · Cited by 451 · see citing works
CFIm25 links alternative polyadenylation to glioblastoma tumour suppression
Masamha, C. P., Xia, Z., Yang, J., Albrecht, T. R., Li, M., Shyu, A., Li, W., & Wagner, E. J. (2014) · Nature · doi:10.1038/nature13261 · Cited by 449 · see citing works
RNA-binding protein HuR enhances p53 translation in response to ultraviolet light irradiation
Mazan-Mamczarz, K., Galbán, S., de Silanes, I. L., Martindale, J. L., Atasoy, U., Keene, J. D., & Gorospe, M. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1432104100 · Cited by 445 · see citing works
Dixon, D. A., Tolley, N. D., King, P. H., Nabors, B., McIntyre, T. M., Zimmerman, G. A., & Prescott, S. M. (2001) · Journal of Clinical Investigation · doi:10.1172/jci12973 · Cited by 443 · see citing works
RNA SHAPE analysis in living cells
Spitale, R. C., Crisalli, P., Flynn, R. A., Torre, E. A., Kool, E. T., & Chang, H. Y. (2012) · Nature Chemical Biology · doi:10.1038/nchembio.1131 · Cited by 442 · see citing works
Chan, C. T. Y., Pang, Y. L. J., Deng, W., Babu, I. R., Dyavaiah, M., Begley, T. J., & Dedon, P. C. (2012) · Nature Communications · doi:10.1038/ncomms1938 · Cited by 442 · see citing works
Boon, K., Caron, H. N., van Asperen, R., Valentijn, L. J., Hermus, M.-C., Sluis, P. V., Roobeek, I., Weis, I., Voûte, P. A., Schwab, M., et al. (2001) · The EMBO Journal · doi:10.1093/emboj/20.6.1383 · Cited by 439 · see citing works
ER stress–mediated autophagy promotes Myc-dependent transformation and tumor growth
Hart, L. S., Cunningham, J. T., Datta, T., Dey, S., Tameire, F., Lehman, S. L., Qiu, B., Zhang, H., Cerniglia, G. J., Bi, M., et al. (2012) · Journal of Clinical Investigation · doi:10.1172/jci62973 · Cited by 436 · see citing works
Self-citationDyskeratosis Congenita and Cancer in Mice Deficient in Ribosomal RNA Modification
Ruggero, D., Grisendi, S., Piazza, F., Rego, E. M., Mari, F., Rao, P. H., Cordon‐Cardo, C., & Pandolfi, P. P. (2003) · Science · doi:10.1126/science.1079447 · Cited by 435 · see citing works
Self-citationSuppression of Myc oncogenic activity by ribosomal protein haploinsufficiency
Barna, M., Pusic, A., Zollo, O., Costa, M. J., Kondrashov, N., Rego, E., Rao, P., & Ruggero, D. (2008) · Nature · doi:10.1038/nature07449 · Cited by 434 · see citing works
Self-citationDirect activation of RNA polymerase III transcription by c-Myc
Gomez-Roman, N., Grandori, C., Eisenman, R. N., & White, R. J. (2003) · Nature · doi:10.1038/nature01327 · Cited by 434 · see citing works
Principles of ER cotranslational translocation revealed by proximity-specific ribosome profiling
Jan, C. H., Williams, C. C., & Weissman, J. S. (2014) · Science · doi:10.1126/science.1257521 · Cited by 431 · see citing works
eIF3 targets cell-proliferation messenger RNAs for translational activation or repression
Lee, A. S. Y., Kranzusch, P. J., & Cate, J. H. D. (2015) · Nature · doi:10.1038/nature14267 · Cited by 429 · see citing works
Impaired Control of IRES-Mediated Translation in X-Linked Dyskeratosis Congenita
Yoon, A., Peng, G., Brandenburg, Y., Zollo, O., Xu, W. G., Rego, E. M., & Ruggero, D. (2006) · Science · doi:10.1126/science.1123835 · Cited by 423 · see citing works
Self-citationKoromilas, A. E., Lazaris-Karatzas, A., & Sonenberg, N. (1992) · The EMBO Journal · doi:10.1002/j.1460-2075.1992.tb05508.x · Cited by 422 · see citing works
Rajasekhar, V. K., Viale, A., Socci, N. D., Wiedmann, M., Hu, X., & Holland, E. C. (2003) · Molecular Cell · doi:10.1016/s1097-2765(03)00395-2 · Cited by 420 · see citing works
Musashi-2 regulates normal hematopoiesis and promotes aggressive myeloid leukemia
Kharas, M., Lengner, C., Al-Shahrour, F., Bullinger, L., Ball, B., Zaidi, S., Morgan, K. J., Tam, W. F., Paktinat, M., Okabe, R., et al. (2010) · Nature Medicine · doi:10.1038/nm.2187 · Cited by 417 · see citing works
The eEF2 Kinase Confers Resistance to Nutrient Deprivation by Blocking Translation Elongation
Leprivier, G., Remke, M., Rotblat, B., Dubuc, A. M., Mateo, A.-R. F., Kool, M., Agnihotri, S., El-Naggar, A. M., Yu, B., Somasekharan, S. P., et al. (2013) · Cell · doi:10.1016/j.cell.2013.04.055 · Cited by 412 · see citing works
She, Q.-B., Halilovic, E., Ye, Q., Zhen, W., Shirasawa, S., Sasazuki, T., Solit, D. B., & Rosen, N. (2010) · Cancer Cell · doi:10.1016/j.ccr.2010.05.023 · Cited by 400 · see citing works
ATP-dependent unwinding of messenger RNA structure by eukaryotic initiation factors.
Ray, B. K., Lawson, T. G., Kramer, J. C., Hadzopoulou‐Cladaras, M., GRIFO, J. A., Abramson, R. D., Merrick, W. C., & Thach, R. E. (1985) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)39658-8 · Cited by 399 · see citing works
Johannes, G., Carter, M. S., Eisen, M. B., Brown, P. O., & Sarnow, P. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.23.13118 · Cited by 394 · see citing works
Graff, J., Konicek, B., Vincent, T. M., Lynch, R. L., Monteith, D., Weir, S., Schwier, P., Capen, A., Goode, R., Dowless, M., et al. (2007) · Journal of Clinical Investigation · doi:10.1172/jci32044 · Cited by 393 · see citing works
Lucks, J. B., Mortimer, S., Trapnell, C., Luo, S. J., Aviran, S., Schroth, G. P., Pachter, L. S., Doudna, J. A., & Arkin, A. P. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1106501108 · Cited by 390 · see citing works
Lovejoy, A. F., Riordan, D. P., & Brown, P. O. (2014) · PLoS ONE · doi:10.1371/journal.pone.0110799 · Cited by 381 · see citing works
Differential Requirements for eIF4E Dose in Normal Development and Cancer
Truitt, M., Conn, C. S., Shi, Z., Pang, X., Tokuyasu, T. A., Coady, A. M., Seo, Y., Barna, M., & Ruggero, D. (2015) · Cell · doi:10.1016/j.cell.2015.05.049 · Cited by 374 · see citing works
Self-citationeIF4F is a nexus of resistance to anti-BRAF and anti-MEK cancer therapies
Boussemart, L., Malka-Mahieu, H., Girault, I., Allard, D., Hemmingsson, O., Tomasic, G., Thomas, M., Basmadjian, C., Ribeiro, N., Thuaud, F., et al. (2014) · Nature · doi:10.1038/nature13572 · Cited by 373 · see citing works
Marcel, V., Ghayad, S. E., Belin, S., Thérizols, G., Morel, A., Solano-Gonzàlez, E., Vendrell, J. A., Hacot, S., Mertani, H. C., Albaret, M. A., et al. (2013) · Cancer Cell · doi:10.1016/j.ccr.2013.08.013 · Cited by 361 · see citing works
Regulation of myeloid leukaemia by the cell-fate determinant Musashi
Ito, T., Kwon, H. Y., Zimdahl, B., Congdon, K. L., Blum, J. M., Lento, W. E., Zhao, C., Lagoo, A. S., Gerrard, G., Foroni, L., et al. (2010) · Nature · doi:10.1038/nature09171 · Cited by 357 · see citing works
Levy, S., Avni, D., Hariharan, N., Perry, R. P., & Meyuhas, O. (1991) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.88.8.3319 · Cited by 344 · see citing works
Translation of 5′ leaders is pervasive in genes resistant to eIF2 repression
Andreev, D. E., O’Connor, P. B. F., Fahey, C., Kenny, E. M., Terenin, I. M., Dmitriev, S. E., Cormican, P., Morris, D. W., Shatsky, I. N., & Baranov, P. V. (2015) · eLife · doi:10.7554/elife.03971 · Cited by 338 · see citing works
Bordeleau, M.-È., Robert, F., Gerard, B., Lindqvist, L., Chen, S. M. H., Wendel, H., Brem, B., Greger, H., Lowe, S. W., Porco, J. A. J., et al. (2008) · Journal of Clinical Investigation · doi:10.1172/jci34753 · Cited by 335 · see citing works
ELAV/Hu proteins inhibit p27 translation via an IRES element in the p27 5′UTR
Kullmann, M., Göpfert, U., Siewe, B., & Hengst, L. (2002) · Genes & Development · doi:10.1101/gad.248902 · Cited by 327 · see citing works
Translational Repression and eIF4A2 Activity Are Critical for MicroRNA-Mediated Gene Regulation
Meijer, H. A., Kong, Y. W., Lu, W. T., Wilczynska, A., Spriggs, R. V., Robinson, S. W., Godfrey, J. D., Willis, A. E., & Bushell, M. (2013) · Science · doi:10.1126/science.1231197 · Cited by 326 · see citing works
A Secreted PTEN Phosphatase That Enters Cells to Alter Signaling and Survival
Hopkins, B. D., Fine, B. M., Steinbach, N., Dendy, M., Rapp, Z., Shaw, J. M., Pappas, K., Yu, J. S., Hodakoski, C., Mense, S. M., et al. (2013) · Science · doi:10.1126/science.1234907 · Cited by 325 · see citing works
Trm9-Catalyzed tRNA Modifications Link Translation to the DNA Damage Response
Begley, U., Dyavaiah, M., Patil, A., Rooney, J. P., DiRenzo, D. M., Young, C. M., Conklin, D. S., Zitomer, R. S., & Begley, T. J. (2007) · Molecular Cell · doi:10.1016/j.molcel.2007.09.021 · Cited by 325 · see citing works
mRNA helicases: the tacticians of translational control
Parsyan, A., Svitkin, Y., Shahbazian, D., Gkogkas, C., Lasko, P., Merrick, W. C., & Sonenberg, N. (2011) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm3083 · Cited by 323 · see citing works
A hypoxia-controlled cap-dependent to cap-independent translation switch in breast cancer.
Braunstein, S., Karpisheva, K., Pola, C., Goldberg, J., Hochman, T., Yee, H., Cangiarella, J., Arju, R., Formenti, S., & Schneider, R. (2007) · Molecules and Cells · doi:10.1016/j.molcel.2007.10.019 · Cited by 320 · see citing works
RNA regulons in Hox 5′ UTRs confer ribosome specificity to gene regulation
Xue, S., Tian, S., Fujii, K., Kladwang, W., Das, R., & Barna, M. (2014) · Nature · doi:10.1038/nature14010 · Cited by 319 · see citing works
An oxygen-regulated switch in the protein synthesis machinery
Uniacke, J., Holterman, C. E., Lachance, G., Franovic, A., Jacob, M. D., Fabian, M. R., Payette, J., Holcik, M., Pause, A., & Lee, S. (2012) · Nature · doi:10.1038/nature11055 · Cited by 319 · see citing works
FragSeq: transcriptome-wide RNA structure probing using high-throughput sequencing
Underwood, J. G., Uzilov, A. V., Katzman, S. J., Onodera, C. S., Mainzer, J. E., Mathews, D. H., Lowe, T. M., Salama, S. R., & Haussler, D. H. (2010) · Nature Methods · doi:10.1038/nmeth.1529 · Cited by 315 · see citing works
Drosophila miR2 induces pseudo-polysomes and inhibits translation initiation
Thermann, R., & Hentze, M. W. (2007) · Nature · doi:10.1038/nature05878 · Cited by 314 · see citing works
Cross-linking, ligation, and sequencing of hybrids reveals RNA–RNA interactions in yeast
Kudla, G., Granneman, S., Hahn, D., Beggs, J. D., & Tollervey, D. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1017386108 · Cited by 308 · see citing works
Regulation of protein synthesis by the heme-regulated eIF2α kinase: relevance to anemias
Chen, J.-J. (2006) · Blood · doi:10.1182/blood-2006-08-041830 · Cited by 306 · see citing works
Chaudhury, A., Hussey, G. S., Ray, P. S., Jin, G., Fox, P. L., & Howe, P. H. (2010) · Nature Cell Biology · doi:10.1038/ncb2029 · Cited by 305 · see citing works
mTORC1-mediated translational elongation limits intestinal tumour initiation and growth
Faller, W. J., Jackson, T. J., Knight, J. R. P., Ridgway, R. A., Jamieson, T. J., Karim, S. A., Jones, C., Radulescu, S., Huels, D. J., Myant, K., et al. (2014) · Nature · doi:10.1038/nature13896 · Cited by 302 · see citing works
A new internal-ribosome-entry-site motif potentiates XIAP- mediated cytoprotection
Holčı́k, M., Lefebvre, C. A., Yeh, C., Chow, T. Y.-K., & Korneluk, R. G. (1999) · Nature Cell Biology · doi:10.1038/11109 · Cited by 302 · see citing works
Antitumor Activity and Mechanism of Action of the Cyclopenta[b]benzofuran, Silvestrol
Cencic, R., Carrier, M., Galicia-Vázquez, G., Bordeleau, M.-E., Sukarieh, R., Bourdeau, A., Brem, B., Teodoro, J. G., Greger, H., Tremblay, M. L., et al. (2009) · PLoS ONE · doi:10.1371/journal.pone.0005223 · Cited by 302 · see citing works
tRNA over-expression in breast cancer and functional consequences
Pavon-Eternod, M., Gomes, S., Geslain, R., Dai, Q., Rosner, M. R., & Pan, T. (2009) · Nucleic Acids Research · doi:10.1093/nar/gkp787 · Cited by 296 · see citing works
Pourdehnad, M., Truitt, M., Siddiqi, I. N., Ducker, G. S., Shokat, K. M., & Ruggero, D. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1310230110 · Cited by 288 · see citing works
Self-citationCho, P. F., Poulin, F., Yoon, A. C.-P., Cho-Park, I. B., Chicoine, J., Lasko, P., & Sonenberg, N. (2005) · Cell · doi:10.1016/j.cell.2005.02.024 · Cited by 279 · see citing works
Mutation of the CDKN2A 5' UTR creates an aberrant initiation codon and predisposes to melanoma
Liu, L., Dilworth, D., Gao, L., Monzon, J. G., Summers, A., Lassam, N. J., & Hogg, D. (1999) · Nature Genetics · doi:10.1038/5082 · Cited by 276 · see citing works
Diagnostic and prognostic signatures from the small non-coding RNA transcriptome in prostate cancer
Martens‐Uzunova, E. S., Jalava, S. E., Dits, N. F. J., van Leenders, G. J. L. H., Møller, S., Trapman, J., Bangma, C. H., Litman, T., Visakorpi, T., & Jenster, G. W. (2011) · Oncogene · doi:10.1038/onc.2011.304 · Cited by 271 · see citing works
C/EBPβ at the core of the TGFβ cytostatic response and its evasion in metastatic breast cancer cells
Gomis, R. R., Alarcón, C. R., Nadal, C., Poznak, C. H. V., & Massagué, J. (2006) · Cancer Cell · doi:10.1016/j.ccr.2006.07.019 · Cited by 270 · see citing works
hiCLIP reveals the in vivo atlas of mRNA secondary structures recognized by Staufen 1
Sugimoto, Y., Vigilante, A., Darbo, É., Zirra, A., Militti, C., D’Ambrogio, A., Luscombe, N. M., & Ule, J. (2015) · Nature · doi:10.1038/nature14280 · Cited by 270 · see citing works
Fonseca, B. D., Zakaria, C., Jia, J.-J., Graber, T. E., Svitkin, Y. V., Tahmasebi, S., Healy, D., Hoang, H., Jensen, J. M., Diao, I. T., et al. (2015) · Journal of Biological Chemistry · doi:10.1074/jbc.m114.621730 · Cited by 264 · see citing works
Cunningham, J. T., Moreno, M. V., Lodi, A., Ronen, S. M., & Ruggero, D. (2014) · Cell · doi:10.1016/j.cell.2014.03.052 · Cited by 260 · see citing works
Self-citationZhao, J., Yuan, X., Frödin, M., & Grummt, I. (2003) · Molecular Cell · doi:10.1016/s1097-2765(03)00036-4 · Cited by 259 · see citing works
Phosphorylation of eIF4E promotes EMT and metastasis via translational control of SNAIL and MMP-3
Robichaud, N., Rincon, S. V. D., Huor, B., Alain, T., Petruccelli, L. A., Hearnden, J., Gonçalves, C., Grotegut, S., Spruck, C., Furic, L., et al. (2014) · Oncogene · doi:10.1038/onc.2014.146 · Cited by 259 · see citing works
Rosenwald, I. B., Rhoads, D. B., Callanan, L., Isselbacher, K. J., & Schmidt, E. V. (1993) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.90.13.6175 · Cited by 256 · see citing works
Browne, G. J., & Proud, C. G. (2004) · Molecular and Cellular Biology · doi:10.1128/mcb.24.7.2986-2997.2004 · Cited by 256 · see citing works
Tcherkezian, J., Cargnello, M., Roméo, Y., Huttlin, E. L., Lavoie, G., Gygi, S. P., & Roux, P. P. (2014) · Genes & Development · doi:10.1101/gad.231407.113 · Cited by 255 · see citing works
Stefanovsky, V. Y., Pelletier, G., Hannan, R. D., Gagnon-Kugler, T., Rothblum, L. I., & Moss, T. (2001) · Molecular Cell · doi:10.1016/s1097-2765(01)00384-7 · Cited by 242 · see citing works
Dissecting the expression landscape of RNA-binding proteins in human cancers
Kechavarzi, B., & Janga, S. C. (2014) · Genome biology · doi:10.1186/gb-2014-15-1-r14 · Cited by 242 · see citing works
Alternative Translation of the Proto-oncogene c-mycby an Internal Ribosome Entry Site
Nanbru, C., Lafon, I., Audigier, S., Gensac, M.-C., Vagner, S., Huez, G. A., & Prats, A. (1997) · Journal of Biological Chemistry · doi:10.1074/jbc.272.51.32061 · Cited by 242 · see citing works
Songe-Møller, L., van den Born, E., Leihne, V., Vågbø, C. B., Andersstuen, T. K., Krokan, H. E., Kirpekar, F., Falnes, P. Ø., & Klungland, A. (2010) · Molecular and Cellular Biology · doi:10.1128/mcb.01602-09 · Cited by 238 · see citing works
Programmed Translational Readthrough Generates Antiangiogenic VEGF-Ax
Eswarappa, S. M., Potdar, A. A., Koch, W. J., Fan, Y., Vasu, K. I., Lindner, D. J., Willard, B. B., Graham, L. M., DiCorleto, P. E., & Fox, P. L. (2014) · Cell · doi:10.1016/j.cell.2014.04.033 · Cited by 237 · see citing works
Jones, R. M., Branda, J. A., Johnston, K. A., Polymenis, M., Gadd, M. A., Rustgi, A. K., Callanan, L., & Schmidt, E. V. (1996) · Molecular and Cellular Biology · doi:10.1128/mcb.16.9.4754 · Cited by 237 · see citing works
Tissue-specific codon usage and the expression of human genes
Plotkin, J. B., Robins, H. S., & Levine, A. J. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0404957101 · Cited by 235 · see citing works
Connolly, E., Braunstein, S., Formenti, S., & Schneider, R. (2006) · Molecular and Cellular Biology · doi:10.1128/mcb.26.10.3955-3965.2006 · Cited by 233 · see citing works
mTOR associates with TFIIIC, is found at tRNA and 5S rRNA genes, and targets their repressor Maf1
Kantidakis, T., Ramsbottom, B. A., Birch, J. L., Dowding, S. N., & White, R. J. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1005188107 · Cited by 218 · see citing works
The GAIT system: a gatekeeper of inflammatory gene expression
Mukhopadhyay, R., Jia, J., Arif, A., Ray, P. S., & Fox, P. L. (2009) · Trends in Biochemical Sciences · doi:10.1016/j.tibs.2009.03.004 · Cited by 216 · see citing works
Ilić, N., Utermark, T., Widlund, H. R., & Roberts, T. M. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1108237108 · Cited by 213 · see citing works
Landers, J. E., Cassel, S., & George, D. L. (1997) · PubMed · Cited by 210 · see citing works
Two internal ribosome entry sites mediate the translation of p53 isoforms
Ray, P. S., Grover, R., & Das, S. (2006) · EMBO Reports · doi:10.1038/sj.embor.7400623 · Cited by 209 · see citing works
Repression of RNA polymerase III transcription by the retinoblastoma protein
White, R. J., Trouche, D., Martin, K., Jackson, S. P., & Kouzarides, T. (1996) · Nature · doi:10.1038/382088a0 · Cited by 205 · see citing works
Fu, D., Brophy, J. A. N., Chan, C. T. Y., Atmore, K. A., Begley, U., Paules, R. S., Dedon, P. C., Begley, T. J., & Samson, L. D. (2010) · Molecular and Cellular Biology · doi:10.1128/mcb.01604-09 · Cited by 204 · see citing works
Immunological detection of the messenger RNA cap-binding protein.
Hiremath, L., Webb, N. R., & Rhoads, R. E. (1985) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)39529-7 · Cited by 202 · see citing works
Kinetic analysis reveals successive steps leading to miRNA‐mediated silencing in mammalian cells
Béthune, J., Artus-Revel, C. G., & Filipowicz, W. (2012) · EMBO Reports · doi:10.1038/embor.2012.82 · Cited by 201 · see citing works
Rubio, C. A., Weisburd, B., Holderfield, M., Arias, C., Fang, E., DeRisi, J. L., & Fanidi, A. (2014) · Genome Biology · doi:10.1186/s13059-014-0476-1 · Cited by 200 · see citing works
A perspective on mammalian upstream open reading frame function
Somers, J., Pöyry, T. A. A., & Willis, A. E. (2013) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/j.biocel.2013.04.020 · Cited by 199 · see citing works
Initiation of Apaf-1 translation by internal ribosome entry
Coldwell, M. J., Mitchell, S. A., Stoneley, M., MacFarlane, M., & Willis, A. E. (2000) · Oncogene · doi:10.1038/sj.onc.1203407 · Cited by 199 · see citing works
A Novel 4EHP-GIGYF2 Translational Repressor Complex Is Essential for Mammalian Development
Morita, M., Ler, L. W., Fabian, M. R., Siddiqui, N., Mullin, M. J., Henderson, V. C., Alain, T., Fonseca, B. D., Karashchuk, G., Bennett, C. F., et al. (2012) · Molecular and Cellular Biology · doi:10.1128/mcb.00455-12 · Cited by 198 · see citing works
Identification of an mRNP Complex Regulating Tumorigenesis at the Translational Elongation Step
Hussey, G. S., Chaudhury, A., Dawson, A. E., Lindner, D. J., Knudsen, C. R., Wilce, M. C. J., Merrick, W. C., & Howe, P. H. (2011) · Molecular Cell · doi:10.1016/j.molcel.2011.02.003 · Cited by 193 · see citing works
p53 is a general repressor of RNA polymerase III transcription
Cairns, C. A., & White, R. J. (1998) · The EMBO Journal · doi:10.1093/emboj/17.11.3112 · Cited by 190 · see citing works
Kim, S., Li, Q., Dang, C. V., & Lee, L. A. (2000) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.200372597 · Cited by 187 · see citing works
Eukaryotic elongation factor 2 kinase, an unusual enzyme with multiple roles
Kenney, J. W., Moore, C. E., Xuemin, W., & Proud, C. G. (2014) · Advances in Biological Regulation · doi:10.1016/j.jbior.2014.04.003 · Cited by 182 · see citing works
Regulation of XIAP Translation and Induction by MDM2 following Irradiation
Gu, L., Zhu, N., Zhang, H., Durden, D. L., Feng, Y., & Zhou, M. (2009) · Cancer Cell · doi:10.1016/j.ccr.2009.03.002 · Cited by 178 · see citing works
Mitotic cell-cycle progression is regulated by CPEB1 and CPEB4-dependent translational control
Novoa, I., Gallego, J. G., Ferreira, P. G., & Méndez, R. (2010) · Nature Cell Biology · doi:10.1038/ncb2046 · Cited by 177 · see citing works
Preitner, N., Quan, J., Nowakowski, D. W., Hancock, M., Shi, J., Tcherkezian, J., Young‐Pearse, T. L., & Flanagan, J. G. (2014) · Cell · doi:10.1016/j.cell.2014.05.042 · Cited by 174 · see citing works
ALKBH8-mediated formation of a novel diastereomeric pair of wobble nucleosides in mammalian tRNA
van den Born, E., Vågbø, C. B., Songe-Møller, L., Leihne, V., Lien, G. F., Leszczyńska, G., Małkiewicz, A. J., Krokan, H. E., Kirpekar, F., Klungland, A., et al. (2011) · Nature Communications · doi:10.1038/ncomms1173 · Cited by 174 · see citing works
Bellodi, C., Krasnykh, O., Haynes, N., Theodoropoulou, M., Peng, G., Montanaro, L., & Ruggero, D. (2010) · Cancer Research · doi:10.1158/0008-5472.can-09-4730 · Cited by 173 · see citing works
Self-citationLazaris-Karatzas, A., & Sonenberg, N. (1992) · Molecular and Cellular Biology · doi:10.1128/mcb.12.3.1234 · Cited by 171 · see citing works
Human eIF4E promotes mRNA restructuring by stimulating eIF4A helicase activity
Feoktistova, K., Tuvshintogs, E., Do, A., & Fraser, C. S. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1303781110 · Cited by 169 · see citing works
Bellodi, C., Kopmar, N. E., & Ruggero, D. (2010) · The EMBO Journal · doi:10.1038/emboj.2010.83 · Cited by 168 · see citing works
Self-citationCPEB1 coordinates alternative 3′-UTR formation with translational regulation
Bava, F.-A., Eliscovich, C., Ferreira, P. G., Miñana, B., Ben-Dov, C., Guigó, R., Valcárcel, J., & Méndez, R. (2013) · Nature · doi:10.1038/nature11901 · Cited by 164 · see citing works
Qin, X., & Sarnow, P. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m312854200 · Cited by 160 · see citing works
Mechanisms of regulation of RNA polymerase III‐dependent transcription by TORC1
Wei, Y., Tsang, C. K., & Zheng, X.-F. (2009) · The EMBO Journal · doi:10.1038/emboj.2009.179 · Cited by 156 · see citing works
Izquierdo, J. M. (2008) · Journal of Biological Chemistry · doi:10.1074/jbc.m800017200 · Cited by 156 · see citing works
BCL-2 Translation Is Mediated via Internal Ribosome Entry during Cell Stress
Sherrill, K. W., Byrd, M. P., Eden, M. E. V., & Lloyd, R. E. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m402727200 · Cited by 155 · see citing works
Regulation of rat ornithine decarboxylase mRNA translation by its 5'-untranslated region.
Manzella, J. M., & Blackshear, P. J. (1990) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)38471-6 · Cited by 154 · see citing works
Rare Codons Regulate KRas Oncogenesis
Lampson, B. L., Pershing, N. L., Prinz, J. A., Lacsina, J. R., Marzluff, W. F., Nicchitta, C. V., MacAlpine, D. M., & Counter, C. M. (2012) · Current Biology · doi:10.1016/j.cub.2012.11.031 · Cited by 150 · see citing works
Flagged first, then by citations
Research works printed but not linked: 1
- [42]Kevil CG Translational regulation of vascular permeability factor by eukaryotic initiation factor 4E: implications for tumor angiogenesis Int J Cancer 65 785 790 1996 8631593
Cited by
Sorted by citations
Ribosome biogenesis in cancer: new players and therapeutic avenues
Pelletier, J., Thomas, G., & Volarević, S. (2017) · Nature reviews. Cancer · doi:10.1038/nrc.2017.104 · Cited by 802 · see citing works
RNA-Binding Proteins in Cancer: Old Players and New Actors
Pereira, B., Billaud, M., & Almeida, R. (2017) · Trends in cancer · doi:10.1016/j.trecan.2017.05.003 · Cited by 765 · see citing works
The m6A reader YTHDF1 promotes ovarian cancer progression via augmenting EIF3C translation
Liu, T., Wei, Q., Jin, J., Luo, Q., Liu, Y., Yu, Y., Cheng, C., Li, L., Pi, J., Si, Y., et al. (2020) · Nucleic Acids Research · doi:10.1093/nar/gkaa048 · Cited by 751 · see citing works
Pseudouridylation of tRNA-Derived Fragments Steers Translational Control in Stem Cells
Guzzi, N., Cieśla, M., Ngoc, P. C. T., Lang, S., Arora, S., Dimitriou, M., Pimková, K., Sommarin, M. N. E., Munita, R., Lubas, M., et al. (2018) · Cell · doi:10.1016/j.cell.2018.03.008 · Cited by 521 · see citing works
Translational Control in CancerPreprint
Robichaud, N., Sonenberg, N., Ruggero, D., & Schneider, R. J. (2018) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a032896 · Cited by 309 · see citing works
Self-citationErratum: New frontiers in translational control of the cancer genome
Truitt, M., & Ruggero, D. (2017) · Nature reviews. Cancer · doi:10.1038/nrc.2017.30 · Cited by 306 · see citing works
Self-citationAlpha-foetoprotein (AFP): A multi-purpose marker in hepatocellular carcinoma
Sauzay, C., Petit, A., Bourgeois, A.-M., Barbare, J., Chauffert, B., Galmiche, A., & Houessinon, A. (2016) · Clinica Chimica Acta · doi:10.1016/j.cca.2016.10.006 · Cited by 293 · see citing works
The plasticity of mRNA translation during cancer progression and therapy resistance
Fabbri, L., Chakraborty, A., Robert, C., & Vagner, S. (2021) · Nature reviews. Cancer · doi:10.1038/s41568-021-00380-y · Cited by 273 · see citing works
Codon-specific translation reprogramming promotes resistance to targeted therapy
Rapino, F., Delaunay, S., Rambow, F., Zhou, Z., Tharun, L., De Tullio, P., Sin, O., Shostak, K., Schmitz, S., Piepers, J., et al. (2018) · Nature · doi:10.1038/s41586-018-0243-7 · Cited by 271 · see citing works
Translation deregulation in human disease
Tahmasebi, S., Khoutorsky, A., Mathews, M. B., & Sonenberg, N. (2018) · Nature Reviews Molecular Cell Biology · doi:10.1038/s41580-018-0034-x · Cited by 255 · see citing works
Translational control of tumor immune escape via the eIF4F–STAT1–PD-L1 axis in melanoma
Cerezo, M., Guemiri, R., Druillennec, S., Girault, I., Malka-Mahieu, H., Shen, S., Allard, D., Martineau, S., Welsch, C., Agoussi, S., et al. (2018) · Nature Medicine · doi:10.1038/s41591-018-0217-1 · Cited by 249 · see citing works
Kampen, K. R., Sulima, S. O., Vereecke, S., & Keersmaecker, K. D. (2019) · Nucleic Acids Research · doi:10.1093/nar/gkz637 · Cited by 217 · see citing works
METTL13 methylation of eEF1A increases translational output to promote tumorigenesis
Liu, S., Hausmann, S., Carlson, S. M., Fuentes, M. E., Francis, J., Pillai, R., Lofgren, S. M., Hulea, L., Tandoc, K. V., Lu, J.-W., et al. (2019) · Cell · doi:10.1016/j.cell.2018.11.038 · Cited by 175 · see citing works
METTL1 promotes hepatocarcinogenesis via m 7 G tRNA modification‐dependent translation control
Chen, Z., Zhu, W., Zhu, S., Sun, K., Liao, J., Liu, H., Dai, Z., Han, H., Ren, X., Yang, Q., et al. (2021) · Clinical and Translational Medicine · doi:10.1002/ctm2.661 · Cited by 204 · see citing works
Neat1 is a p53-inducible lincRNA essential for transformation suppressionPreprint
Mello, S. S., Sinow, C., Raj, N., Mazur, P. K., Bieging-Rolett, K. T., Brož, D. K., Conklin, J. F., Vogel, H. S., Wood, L. D., Sage, J., et al. (2017) · Genes & Development · doi:10.1101/gad.284661.116 · Cited by 203 · see citing works
Reich, S., Sprengeler, P. A., Chiang, G. G., Appleman, J. R., Chen, J. W., Clarine, J., Eam, B., Ernst, J. T., Han, Q., Goel, V., et al. (2018) · Journal of Medicinal Chemistry · doi:10.1021/acs.jmedchem.7b01795 · Cited by 185 · see citing works
RNA-binding Proteins in Regulating mRNA Stability and Translation: Roles and Mechanisms in Cancer
Li, W., Deng, X., & Chen, J.-J. (2022) · Seminars in Cancer Biology · doi:10.1016/j.semcancer.2022.03.025 · Cited by 168 · see citing works
How Ribosomes Translate Cancer
Sulima, S. O., Hofman, I. J., Keersmaecker, K. D., & Dinman, J. D. (2017) · Cancer Discovery · doi:10.1158/2159-8290.cd-17-0550 · Cited by 174 · see citing works
RNA-binding proteins and cancer metastasis
Wang, S., Sun, Z., Lei, Z., & Zhang, H. (2022) · Seminars in Cancer Biology · doi:10.1016/j.semcancer.2022.03.018 · Cited by 175 · see citing works
Development of a stress response therapy targeting aggressive prostate cancer
Nguyen, H. G., Conn, C. S., Kye, Y., Xue, L., Forester, C. M., Cowan, J. E., Hsieh, A. C., Cunningham, J. T., Truillet, C., Tameire, F., et al. (2018) · Science Translational Medicine · doi:10.1126/scitranslmed.aar2036 · Cited by 164 · see citing works
Self-citationRibosomal DNA copy number loss and sequence variation in cancer
Xu, B., Li, H., Perry, J. M., Singh, V. P., Unruh, J. R., Yu, Z., Zakari, M., McDowell, W., Li, L., & Gerton, J. L. (2017) · PLoS Genetics · doi:10.1371/journal.pgen.1006771 · Cited by 148 · see citing works
Ernst, J. T., Thompson, P. A., Nilewski, C., Sprengeler, P. A., Sperry, S., Packard, G., Michels, T., Xiang, A., Tran, C., Wegerski, C. J., et al. (2020) · Journal of Medicinal Chemistry · doi:10.1021/acs.jmedchem.0c00182 · Cited by 150 · see citing works
Polyamine synthesis as a target of MYC oncogenes
Bachmann, A. S., & Geerts, D. (2018) · Journal of Biological Chemistry · doi:10.1074/jbc.tm118.003336 · Cited by 148 · see citing works
A single H/ACA small nucleolar RNA mediates tumor suppression downstream of oncogenic RAS
McMahon, M. E., Contreras, A., Holm, M., Uechi, T., Forester, C. M., Pang, X., Jackson, C. B., Calvert, M., Chen, B., Quigley, D. A., et al. (2019) · eLife · doi:10.7554/elife.48847 · Cited by 137 · see citing works
Self-citationKim, H. K., Yeom, J., & Kay, M. A. (2020) · Molecular Therapy · doi:10.1016/j.ymthe.2020.09.013 · Cited by 134 · see citing works
Wang, M., & Lemos, B. (2017) · PLoS Genetics · doi:10.1371/journal.pgen.1006994 · Cited by 129 · see citing works
Translational Control Mechanisms in Persistent Pain
Khoutorsky, A., & Price, T. J. (2017) · Trends in Neurosciences · doi:10.1016/j.tins.2017.11.006 · Cited by 127 · see citing works
The oncomicropeptide APPLE promotes hematopoietic malignancy by enhancing translation initiation
Sun, L.-Y., Wang, W., Han, C., Huang, W., Sun, Y., Fang, K., Zeng, Z., Yang, Q., Pan, Q., Chen, T., et al. (2021) · Molecular Cell · doi:10.1016/j.molcel.2021.08.033 · Cited by 126 · see citing works
The ribosome, (slow) beating heart of cancer (stem) cell
Bastide, A., & David, A. (2018) · Oncogenesis · doi:10.1038/s41389-018-0044-8 · Cited by 119 · see citing works
Guzzi, N., Muthukumar, S., Cieśla, M., Todisco, G., Ngoc, P. C. T., Madej, M., Munita, R., Fazio, S., Ekström, S., Blanco, T. M., et al. (2022) · Nature Cell Biology · doi:10.1038/s41556-022-00852-9 · Cited by 124 · see citing works
Protein synthesis control in cancer: selectivity and therapeutic targeting
Kovalski, J. R., Kuzuoğlu‐Öztürk, D., & Ruggero, D. (2022) · The EMBO Journal · doi:10.15252/embj.2021109823 · Cited by 120 · see citing works
Self-citationChen, Q., Wang, Y., Yang, L. T., Sun, L., Wen, Y., Huang, Y., Gao, K., Yang, W., Bai, F., Ling, L., et al. (2022) · Journal of Experimental & Clinical Cancer Research · doi:10.1186/s13046-022-02437-8 · Cited by 120 · see citing works
CDK1 couples proliferation with protein synthesis
Haneke, K., Schott, J., Lindner, D., Hollensen, A. K., Damgaard, C. K., Mongis, C., Knop, M., Palm, W., Ruggieri, A., & Stoecklin, G. (2020) · The Journal of Cell Biology · doi:10.1083/jcb.201906147 · Cited by 109 · see citing works
Molecular Pathways: The eIF4F Translation Initiation Complex—New Opportunities for Cancer Treatment
Malka-Mahieu, H., Newman, M., Désaubry, L., Robert, C., & Vagner, S. (2017) · Clinical Cancer Research · doi:10.1158/1078-0432.ccr-14-2362 · Cited by 105 · see citing works
Translational control of aberrant stress responses as a hallmark of cancer
El-Naggar, A. M., & Sorensen, P. H. B. (2018) · The Journal of Pathology · doi:10.1002/path.5030 · Cited by 102 · see citing works
Qin, W., Lv, P., Fan, X., Quan, B., Zhu, Y., Qin, K., Chen, Y., Wang, C., & Chen, X. (2017) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1702688114 · Cited by 98 · see citing works
Ribosome ADP-ribosylation inhibits translation and maintains proteostasis in cancers
Challa, S., Khulpateea, B. R., Nandu, T. S., Camacho, C. V., Ryu, K. W., Chen, H., Peng, Y. S., Lea, J. S., & Kraus, W. L. (2021) · Cell · doi:10.1016/j.cell.2021.07.005 · Cited by 97 · see citing works
Knight, J. R. P., Alexandrou, C., Skalka, G. L., Vlahov, N., Pennel, K., Officer, L., Teodosio, A., Kanellos, G., Gay, D. M., May-Wilson, S., et al. (2021) · Cancer Discovery · doi:10.1158/2159-8290.cd-20-0652 · Cited by 96 · see citing works
Translation elongation rate varies among organs and decreases with age
Gerashchenko, M. V., Péterfi, Z., Yim, S. H., & Gladyshev, V. N. (2020) · Nucleic Acids Research · doi:10.1093/nar/gkaa1103 · Cited by 95 · see citing works
Schmidt, S., Gay, D. M., Uthe, F. W., Denk, S., Paauwe, M., Matthes, N., Diefenbacher, M. E., Bryson, S., Warrander, F., Erhard, F., et al. (2019) · Nature Cell Biology · doi:10.1038/s41556-019-0408-0 · Cited by 94 · see citing works
Ribosomal RNA 2′O-methylation as a novel layer of inter-tumour heterogeneity in breast cancer
Marcel, V., Kielbassa, J., Marchand, V., Natchiar, K., Paraqindes, H., Long, F. N. V., Ayadi, L., Bourguignon‐Igel, V., Monaco, P. L., Monchiet, D., et al. (2020) · NAR Cancer · doi:10.1093/narcan/zcaa036 · Cited by 94 · see citing works
Linking the YTH domain to cancer: the importance of YTH family proteins in epigenetics
Shi, R., Ying, S., Li, Y., Zhu, L., Wang, X., & Jin, H. (2021) · Cell Death and Disease · doi:10.1038/s41419-021-03625-8 · Cited by 93 · see citing works
Quatrini, L., Vacca, P., Tumino, N., Besi, F., Pace, A. L. D., Scordamaglia, F., Martini, S., Munari, E., Mingari, M. C., Ugolini, S., et al. (2020) · Journal of Allergy and Clinical Immunology · doi:10.1016/j.jaci.2020.04.044 · Cited by 90 · see citing works
Targeting RNA helicases in cancer: The translation trap
van Voss, M. R. H., van Diest, P. J., & Raman, V. (2017) · Biochimica et Biophysica Acta (BBA) - Reviews on Cancer · doi:10.1016/j.bbcan.2017.09.006 · Cited by 87 · see citing works
The T-cell leukemia-associated ribosomal RPL10 R98S mutation enhances JAK-STAT signaling
Girardi, T., Vereecke, S., Sulima, S. O., Khan, Y. A., Fancello, L., Briggs, J., Schwab, C. J., de Beeck, J. O., Verbeeck, J., Royaert, J., et al. (2017) · Leukemia · doi:10.1038/leu.2017.225 · Cited by 86 · see citing works
mTOR-dependent translation amplifies microglia priming in aging mice
Keane, L., Antignano, I., Riechers, S., Zollinger, R., Dumas, A. A., Offermann, N., Bernis, M. E., Russ, J., Graelmann, F. J., McCormick, P. N., et al. (2020) · Journal of Clinical Investigation · doi:10.1172/jci132727 · Cited by 86 · see citing works
SWI/SNF component <i>ARID1A</i> restrains pancreatic neoplasia formation
Wang, S. C., Nassour, I., Xiao, S., Zhang, S., Luo, X., Lee, J., Li, L., Sun, X., Nguyen, L. H., Chuang, J.-C., et al. (2019) · Gut · doi:10.1136/gutjnl-2017-315490 · Cited by 85 · see citing works
The homeostatic regulation of ribosome biogenesis
Ni, C., & Buszczak, M. (2022) · Seminars in Cell and Developmental Biology · doi:10.1016/j.semcdb.2022.03.043 · Cited by 82 · see citing works
Gameiro, P. A., & Struhl, K. (2018) · Cell Reports · doi:10.1016/j.celrep.2018.07.021 · Cited by 84 · see citing works
Zhang, Z., Ye, Y., Gong, J., Ruan, H., Liu, C., Xiang, Y., Cai, C. C., Guo, A., Ling, J., Diao, L., et al. (2018) · Communications Biology · doi:10.1038/s42003-018-0239-8 · Cited by 81 · see citing works
Emerging Role of Eukaryote Ribosomes in Translational Control
Venezia, N. D., Vincent, A., Marcel, V., Catez, F., & Diaz, J. (2019) · International Journal of Molecular Sciences · doi:10.3390/ijms20051226 · Cited by 77 · see citing works
Corsini, N. S., Peer, A. M., Möseneder, P., Roiuk, M., Burkard, T. R., Theussl, H., Moll, I., & Knoblich, J. A. (2018) · Cell stem cell · doi:10.1016/j.stem.2018.03.002 · Cited by 79 · see citing works
Manjunath, H., Zhang, H., Rehfeld, F., Han, J., Chang, T.-C., & Mendell, J. T. (2019) · Cell Reports · doi:10.1016/j.celrep.2019.10.129 · Cited by 74 · see citing works
Cancer cells employ an evolutionarily conserved polyploidization program to resist therapy
Pienta, K. J., Hammarlund, E. U., Austin, R. H., Axelrod, R., Brown, J. S., & Amend, S. R. (2020) · Seminars in Cancer Biology · doi:10.1016/j.semcancer.2020.11.016 · Cited by 77 · see citing works
Desmosomes as Signaling Hubs in the Regulation of Cell Behavior
Müller, L., Hatzfeld, M., & Keil, R. (2021) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2021.745670 · Cited by 78 · see citing works
Novel insights into the emerging roles of tRNA-derived fragments in mammalian development
Guzzi, N., & Bellodi, C. (2020) · RNA Biology · doi:10.1080/15476286.2020.1732694 · Cited by 77 · see citing works
Role of Cyclin-Dependent Kinase 1 in Translational Regulation in the M-Phase
Kalous, J., Jansová, D., & Šušor, A. (2020) · Cells · doi:10.3390/cells9071568 · Cited by 54 · see citing works
Smit, W. L., Spaan, C. N., de Boer, R. J., Ramesh, P., Garcia, T. M., Meijer, B. J., Vermeulen, J. L. M., Lezzerini, M., MacInnes, A. W., Köster, J., et al. (2020) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1912772117 · Cited by 77 · see citing works
eIF4E-Dependent Translational Control: A Central Mechanism for Regulation of Pain Plasticity
Uttam, S., Wong, C., Price, T. J., & Khoutorsky, A. (2018) · Frontiers in Genetics · doi:10.3389/fgene.2018.00470 · Cited by 75 · see citing works
Vaklavas, C., Blume, S. W., & Grizzle, W. E. (2017) · Frontiers in Oncology · doi:10.3389/fonc.2017.00158 · Cited by 71 · see citing works
Regulators of cardiac fibroblast cell state
Bretherton, R. C., Bugg, D., Olszewski, E., & Davis, J. (2020) · Matrix Biology · doi:10.1016/j.matbio.2020.04.002 · Cited by 71 · see citing works
Dysfunctional tRNA reprogramming and codon-biased translation in cancer
Dedon, P., & Begley, T. J. (2022) · Trends in Molecular Medicine · doi:10.1016/j.molmed.2022.09.007 · Cited by 66 · see citing works
Manier, S., Huynh, D., Shen, Y. J., Zhou, J., Yusufzai, T. M., Salem, K. Z., Ebright, R. Y., Shi, J., Park, J., Glavey, S. V., et al. (2017) · Science Translational Medicine · doi:10.1126/scitranslmed.aal2668 · Cited by 71 · see citing works
Translational control and the cancer cell response to stress
Robichaud, N., & Sonenberg, N. (2017) · Current Opinion in Cell Biology · doi:10.1016/j.ceb.2017.05.007 · Cited by 72 · see citing works
Human eIF3: from ‘blobology’ to biological insight
Cate, J. H. D. (2017) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2016.0176 · Cited by 68 · see citing works
Ribosome Biogenesis Alterations in Colorectal Cancer
Nait-Slimane, S., Marcel, V., Fenouil, T., Catez, F., Saurin, J., Bouvet, P., Diaz, J., & Mertani, H. C. (2020) · Cells · doi:10.3390/cells9112361 · Cited by 68 · see citing works
Pérez‐Guijarro, E., Karras, P., Cifdaloz, M., Martínez-Herranz, R., Cañón, E., Graña‐Castro, O., Horcajada‐Reales, C., Alonso‐Curbelo, D., Calvo, T. G., Goméz-López, G., et al. (2016) · Nature Communications · doi:10.1038/ncomms13418 · Cited by 67 · see citing works
Finlay-Schultz, J., Gillen, A. E., Brechbuhl, H. M., Ivie, J., Matthews, S. B., Jacobsen, B. M., Bentley, D. L., Kabos, P., & Sartorius, C. A. (2017) · Cancer Research · doi:10.1158/0008-5472.can-16-3541 · Cited by 66 · see citing works
The integrated stress response in cancer progression: a force for plasticity and resistance
Lines, C. L., McGrath, M. J., Dorwart, T. J., & Conn, C. S. (2023) · Frontiers in Oncology · doi:10.3389/fonc.2023.1206561 · Cited by 69 · see citing works
Gilles, A., Fréchin, L., Natchiar, K., Biondani, G., von Loeffelholz, O., Holvec, S., Malaval, J., Winum, J., Klaholz, B. P., & Peyron, J. (2020) · Cells · doi:10.3390/cells9030629 · Cited by 66 · see citing works
Chu, W., Zhang, X., Qi, L., Fu, Y., Wang, P., Zhao, W., Du, J., Zhang, J., Zhan, J., Wang, Y., et al. (2020) · Cancer Research · doi:10.1158/0008-5472.can-19-3326 · Cited by 65 · see citing works
Clusan, L., Goff, P. L., Flouriot, G., & Pakdel, F. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms22020756 · Cited by 65 · see citing works
George, J., Li, Y., Kadamberi, I. P., Parashar, D., Tsaih, S.-W., Gupta, P., Geethadevi, A., Chen, C., Ghosh, C., Sun, Y., et al. (2021) · Cell Reports · doi:10.1016/j.celrep.2021.109934 · Cited by 65 · see citing works
Revealing nascent proteomics in signaling pathways and cell differentiation
Forester, C. M., Zhao, Q. C., Phillips, N. J., Urisman, A., Chalkley, R. J., Osés-Prieto, J. A., Zhang, L., Ruggero, D., & Burlingame, A. L. (2018) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1707514115 · Cited by 67 · see citing works
Self-citationWu, C., Hou, S., Orr, B. A., Kuo, B., Youn, Y. H., Ong, T., Roth, F., Eberhart, C. G., Robinson, G. W., Solecki, D. J., et al. (2017) · Developmental Cell · doi:10.1016/j.devcel.2017.10.011 · Cited by 58 · see citing works
uORF-mediated translational control: recently elucidated mechanisms and implications in cancer
Chen, H.-H., & Tarn, W. (2019) · RNA Biology · doi:10.1080/15476286.2019.1632634 · Cited by 58 · see citing works
40 Years of Research Put p53 in Translation
Marcel, V., Long, F. N. V., & Diaz, J. (2018) · Cancers · doi:10.3390/cancers10050152 · Cited by 60 · see citing works
Zhang, S., Bao, Y., Shen, X., Pan, Y., Sun, Y., Xiao, M., Chen, K., Wei, H., Zuo, J., Saffen, D., et al. (2020) · EBioMedicine · doi:10.1016/j.ebiom.2020.103067 · Cited by 59 · see citing works
tRNA-derived small RNAs: Mechanisms and potential roles in cancers
Wang, Y., Weng, Q., Ge, J., Zhang, X., Guo, J., & Ye, G. (2022) · Genes & Diseases · doi:10.1016/j.gendis.2021.12.009 · Cited by 60 · see citing works
Song, M., & Grabocka, E. (2020) · Reviews of physiology, biochemistry and pharmacology · doi:10.1007/112_2020_37 · Cited by 59 · see citing works
Genetically encoded bioorthogonal tryptophan decaging in living cells
Zhu, Y., Ding, W., Chen, Y., Shan, Y., Liu, C., Fan, X., Lin, S., & Chen, P. R. (2024) · Nature Chemistry · doi:10.1038/s41557-024-01463-7 · Cited by 59 · see citing works
Cieśla, M., Ngoc, P. C. T., Cordero, E., Martínez, Á. S., Morsing, M., Muthukumar, S., Beneventi, G., Madej, M., Munita, R., Jönsson, T., et al. (2021) · Molecular Cell · doi:10.1016/j.molcel.2021.01.034 · Cited by 59 · see citing works
METTL16 Promotes Translation and Lung Tumorigenesis by Sequestering Cytoplasmic eIF4E2
Wang, F., Zhang, J., Lin, X., Yang, L., Zhou, Q., Mi, X., Li, Q., Wang, S., Li, D., Liu, X., et al. (2022) · Cell Reports · doi:10.1016/j.celrep.2023.112150 · Cited by 57 · see citing works
Bhalla, K., Jaber, S. M., Nanaji, N. M., Underwood, K. F., Beheshti, A., Landon, A. L., Bhandary, B., Bastian, P., Evens, A. M., Haley, J. D., et al. (2018) · Scientific Reports · doi:10.1038/s41598-018-19182-8 · Cited by 56 · see citing works
Jana, S., Brahma, S., Arora, S., Wladyka, C. L., Hoang, P., Blinka, S. M., Hough, R. P., Horn, J. L., Liu, Y., Wang, L., et al. (2023) · Cancer Cell · doi:10.1016/j.ccell.2023.03.021 · Cited by 56 · see citing works
tRNA Modification: Is Cancer Having a Wobble?
Rapino, F. A., Delaunay, S., Zhou, Z., Chariot, A., & Close, P. (2017) · Trends in cancer · doi:10.1016/j.trecan.2017.02.004 · Cited by 56 · see citing works
Levy, T., Voeltzke, K., Hruby, L. A., Alasad, K., Bas, Z., Snaebjornsson, M. T., Marciano, R., Scharov, K., Planque, M., Vriens, K., et al. (2024) · Nature Communications · doi:10.1038/s41467-024-48386-y · Cited by 53 · see citing works
Alteration of ribosome function upon 5-fluorouracil treatment favors cancer cell drug-tolerance
Thérizols, G., Bash-Imam, Z., Panthu, B., Machon, C., Vincent, A., Ripoll, J., Nait-Slimane, S., Chalabi‐Dchar, M., Gaucherot, A., Garcia, M., et al. (2022) · Nature Communications · doi:10.1038/s41467-021-27847-8 · Cited by 52 · see citing works
Errors in translational decoding: tRNA wobbling or misincorporation?
Ou, X., Cao, J., Cheng, A., Peppelenbosch, M. P., & Pan, Q. (2019) · PLoS Genetics · doi:10.1371/journal.pgen.1008017 · Cited by 51 · see citing works
Nucleoporin Nup155 is part of the p53 network in liver cancer
Hölzer, K., Ori, A., Cooke, A. M., Dauch, D., Drucker, E., Riemenschneider, P., Andrés‐Pons, A., DiGuilio, A. L., Mackmull, M., Baßler, J., et al. (2019) · Nature Communications · doi:10.1038/s41467-019-10133-z · Cited by 50 · see citing works
Prognostic role of METTL1 in glioma
Li, L., Yang, Y., Wang, Z., Xu, C., Huang, J., & Li, G. (2021) · Cancer Cell International · doi:10.1186/s12935-021-02346-4 · Cited by 49 · see citing works
SMYD5 methylation of rpL40 links ribosomal output to gastric cancer
Park, J.-H., Wu, J., Szkop, K. J., Jeong, J., Jovanovic, P., Husmann, D., Flores, N. M., Francis, J. W., Chen, Y.-J. C., Benitez, A. M., et al. (2024) · Nature · doi:10.1038/s41586-024-07718-0 · Cited by 45 · see citing works
RNA m6A methylation regulators in ovarian cancer
Guo, J., Zheng, J., Zhang, H., & Tong, J. (2021) · Cancer Cell International · doi:10.1186/s12935-021-02318-8 · Cited by 47 · see citing works
Translational offsetting as a mode of estrogen receptor α‐dependent regulation of gene expression
Lorent, J., Kusnadi, E. P., van Hoef, V., Rebello, R. J., Leibovitch, M., Ristau, J., Chen, S., Lawrence, M. G., Szkop, K. J., Samreen, B., et al. (2019) · The EMBO Journal · doi:10.15252/embj.2018101323 · Cited by 46 · see citing works
Estrogen receptor alpha controls gene expression via translational offsetting
Lorent, J., Rebello, R. J., Hoef, V. V., Lawrence, M. G., Szkop, K. J., Kusnadi, E., Samreen, B., Balanathan, P., Scharmann, K., Takizawa, I., et al. (2018) · doi:10.1101/507574 · Cited by 46 · see citing works
Translating the Game: Ribosomes as Active Players
Calamita, P., Gatti, G., Miluzio, A., Scagliola, A., & Biffo, S. (2018) · Frontiers in Genetics · doi:10.3389/fgene.2018.00533 · Cited by 45 · see citing works
tRNA Modification and Cancer: Potential for Therapeutic Prevention and Intervention
Endres, L., Fasullo, M., & Rose, R. E. (2019) · Future Medicinal Chemistry · doi:10.4155/fmc-2018-0404 · Cited by 45 · see citing works
Survey of the translation shifts in hepatocellular carcinoma with ribosome profiling
Zou, Q., Xiao, Z., Huang, R., Wang, X., Wang, X., Zhao, H., & Yang, X. (2019) · Theranostics · doi:10.7150/thno.35033 · Cited by 44 · see citing works
Targeting translation: a promising strategy for anticancer metallodrugs
Ortega, E., Vigueras, G., Ballester, F. J., & Ruiz, J. (2021) · Coordination Chemistry Reviews · doi:10.1016/j.ccr.2021.214129 · Cited by 44 · see citing works
- Authors
- Truitt, M. L., & Ruggero, D.
- Affiliations
- University of California, San Francisco (US)
- Venue
- Nature Reviews Cancer
- Published
- 2016-04-26
- Volume
- 16
- Issue
- 5
- Pages
- 288-304
- ISSN
- 1474-175X (ISSN-L)
- 1474-1768
- PMC
- PMC5491099
- OpenAlex
- W4235027475
- Cited by
- 378
- References
- 257
- Citations by year
- 2026: 31 · 2025: 25 · 2024: 37 · 2023: 33 · 2022: 52 · 2021: 38 · 2020: 55 · 2019: 22 · 2018: 45 · 2017: 32 · 2016: 8
- FWCI
- 3.23
- Type
- journal article
- Language
- en
- Update notices
- erratum (2017-05-01)
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Nature reviews. Cancer (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Funders
- National Heart, Lung, and Blood Institute (R01HL119439)
- National Cancer Institute (R01CA140456, R01CA184624, P01CA165997, R01CA154916)
- National Institute of Diabetes and Digestive and Kidney Diseases (R01DK098057)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA and protein synthesis mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › PI3K/AKT/mTOR signaling in cancer
- Health Sciences › Medicine › Oncology › Cancer-related Molecular Pathways
- Keywords
- translational regulation, cancer genome, carcinogenesis, gene expression regulation, oncogenic stress, transformed phenotype
- MeSH terms
- Humans, Neoplasms, Oncogenes, RNA, Neoplasm, Protein Biosynthesis, Genome
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review