Cited by 22SARS-CoV-2 and COVID-19 ResearchAnimal Virus Infections Studiesvaccines and immunoinformatics approaches

Efficacy of an unmodified bivalent mRNA vaccine against SARS-CoV-2 variants in female small animal models

Open access
Corleis, Björn, Hoffmann, Donata, Rauch, Susanne, Fricke, Charlie, Roth, Nicole, Gergen, Janina, Kovacikova, Kristina, Schlottau, Kore +12 more·2023·Nature Communications

Abstract

Combining optimized spike (S) protein-encoding mRNA vaccines to target multiple SARS-CoV-2 variants could improve control of the COVID-19 pandemic. We compare monovalent and bivalent mRNA vaccines encoding B.1.351 (Beta) and/or B.1.617.2 (Delta) SARS-CoV-2 S-protein in a transgenic mouse and a Wistar rat model. The blended low-dose bivalent mRNA vaccine contains half the mRNA of each respective monovalent vaccine, but induces comparable neutralizing antibody titres, enrichment of lung-resident memory CD8+ T cells, antigen-specific CD4+ and CD8+ responses, and protects transgenic female mice from SARS-CoV-2 lethality. The bivalent mRNA vaccine significantly reduces viral replication in both Beta- and Delta-challenged mice. Sera from bivalent mRNA vaccine immunized female Wistar rats also contain neutralizing antibodies against the B.1.1.529 (Omicron BA.1 and BA.5) variants. These data suggest that low-dose and fit-for-purpose multivalent mRNA vaccines encoding distinct S-proteins are feasible approaches for extending the coverage of vaccines for emerging and co-circulating SARS-CoV-2 variants.

AI snapshot

Written from the paper’s full text.

TL;DR

A low-dose, unmodified bivalent mRNA vaccine encoding Beta and Delta SARS-CoV-2 spike proteins protected female K18-hACE2 transgenic mice from Beta- and Delta-induced lethality and reduced viral replication, despite containing half the mRNA dose of each monovalent vaccine. In female Wistar rats, bivalent vaccination also induced neutralizing antibodies against Omicron BA.1 and BA.5, with the Beta component appearing to drive broader neutralization.

Key findings

  • In female K18-hACE2 mice, all vaccinated groups were protected from SARS-CoV-2-induced lethality after Beta or Delta challenge, whereas all Beta-challenged and 67% of Delta-challenged sham-vaccinated animals succumbed.
  • The bivalent vaccine contained 0.25 µg mRNA of each variant (total 0.5 µg) but induced neutralizing antibody titres comparable to the 0.5 µg monovalent Beta and Delta vaccines; it also induced significantly higher nAb titres than ancestral CV2CoV and significantly higher sVNT inhibition against Omicron BA.1 than the monovalent vaccines.
  • The bivalent vaccine significantly reduced viral replication in Beta- and Delta-challenged mice; no SARS-CoV-2 genomic RNA or subgenomic RNA was detected in all but one Beta-challenged, bivalent-vaccinated animal, and Delta replication in conchae was abolished in all vaccinated groups.
  • Monovalent and bivalent mRNA vaccines induced lung CD8+ tissue-resident memory T cells, antigen-specific CD4+ and CD8+ responses, and IFNγ/granzyme B production; the bivalent formulation maintained these T cell response qualities at lower antigen doses. Sera from bivalent-vaccinated female Wistar rats neutralized Omicron BA.1 and BA.5, with CV2CoV.351 (Beta) contributing to broader nAb breadth.

Methods

  • Female K18-hACE2 transgenic mice (8–10 weeks old) were vaccinated intramuscularly on Day 0 and Day 28 with 0.5 µg CV2CoV, CV2CoV.351, CV2CoV.617.2, bivalent CV2CoV.351 + CV2CoV.617.2 (0.25 µg each), or NaCl, then challenged on Day 56 with 10^4.4 TCID50 Beta or Delta; oral swabs were taken Day 4 and organs Day 10.
  • Female Wistar rats (7–8 weeks old) were vaccinated on Day 0 and Day 21 with 8 µg monovalent vaccines or bivalent formulations containing 4 µg of each mRNA; neutralizing antibody titres against Delta and Omicron BA.1/BA.5 were tested at Day 42.
  • Analyses included RT-qPCR for viral genomic and subgenomic RNA, RBD ELISA, virus neutralization tests, surrogate virus neutralization tests, flow cytometry for T cell responses, Kaplan–Meier survival analysis, one-way/two-way ANOVA with Dunn’s multiple comparison test, and Spearman correlation.

Limitations

  • The paper states that the characteristic drop in vaccine effectiveness in humans with new variants was not observed in the mouse model, highlighting a potential limitation of the model’s predictive power; it also notes that further studies using lower doses are needed to understand optimal dose ranges and compositions.
  • The paper states that the role, durability, and specificity of TRM CD8+ T cells in protection require further investigation using antibody-mediated depletion, and that TRM quantification has yielded variable results across studies.
  • The text makes evident that only female animals were used, that Omicron was assessed by neutralization rather than challenge, and that the protective efficacy data come from small animal models rather than humans.

Model-written summary. Check it against the paper before relying on it.

Integrity signals

Registry

Crossref · 10.1038/s41467-023-36110-1

Cites

38 of 38 references verified0 citation errors · 0 not checkable

Statistics

Nothing to recompute.

Claims the paper makes

44 of 46 cited sources checked · 22 supported · 0 flagged · accuracy not yet measured

  • Premisecitation

    Omicron does not induce relevant cross-protective neutralizing antibody titres in SARS-CoV-2 naïve populations.

    “Unfortunately, while Omicron appears to cause less severe disease than other variants4, it does not induce relevant cross-protective neutralizing antibody (nAb) titres in SARS-CoV-2 naïve populations, meaning they may be less protected against future infection compared with those previously exposed to other variants or vaccinated5.”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [5] Rössler, A. Knabl, L. von Laer, D. & Kimpel, J. Neutralization Profile after Recovery from SARS-CoV-2 Omicron Infection. N Engl J Med. 386, 1764–1766 (2022). source
  • Findingcitation

    0.5 μg was the lowest tested dose of CV2CoV to induce detectable spike-specific IFNγ producing CD8+ cells.

    “This dosage was based on previous findings from comparative preclinical evaluations of CVnCoV and the current optimized candidate vaccine CV2CoV13, whereby 0.5 µg was the lowest tested dose to fully protect against lethality and induce abundant neutralizing antibodies (Fig. S1a) and induce detectable spike-specific interferon γ (IFNγ) producing CD8+ cells (Fig. S1b).”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [13] Hoffmann, D. et al. CVnCoV and CV2CoV protect human ACE2 transgenic mice from ancestral B BavPat1 and emerging B.1.351 SARS-CoV-2. Nat. Commun. 12, 4048 (2021). source

      The Results (page unavailable) say CV2CoV was tested at doses from 0.5 to 8 µg, establishing 0.5 µg as the lowest tested dose. They report antibody responses and protection at that dose, but do not report detectable spike-specific IFNγ-producing CD8+ cells; the Discussion mentions earlier CD8+ findings for CVnCoV, not CV2CoV. (LLM, conf=0.85)

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  • Premisecitation

    Several SARS-CoV-2 variants of concern, such as Beta and Omicron, evade humoral responses elicited by vaccines based on ancestral S-protein sequences.

    “Several VOCs which have mutated, such as Beta1 and Omicron2, evade humoral responses elicited by vaccines based on ancestral S-protein sequences3.”
    Quote in the paperSubstantial claim3 of 3 sources checked
    • cites [1] Tegally, H. et al. Detection of a SARS-CoV-2 variant of concern in South Africa. Nature 592, 438–443 (2021). source

      The Article (p. 5) reports preliminary evidence that 501Y.V2 (Beta) escapes neutralizing antibodies in convalescent plasma. It says assays using vaccine recipients’ plasma were still underway, so it does not establish escape from vaccine-elicited responses; the cited passages also do not address Omicron. (LLM, conf=0.88)

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    • cites [2] McCallum, M. et al. Structural basis of SARS-CoV-2 Omicron immune evasion and receptor engagement. Science 375, 864–868 (2022). source
    • cites [3] Planas, D. et al. Considerable escape of SARS-CoV-2 Omicron to antibody neutralization. Nature 602, 671–675 (2022). source

      The ‘Sensitivity of Omicron to sera from vaccinees’ section reports that sera collected five months after two Pfizer doses showed almost no detectable neutralization of Omicron, supporting escape from vaccine-elicited antibodies. The paper compares those sera with an ancestral viral strain, but the passages do not establish that the vaccines were based on ancestral spike-protein sequences. Its reported vaccine-serum experiments concern Omicron, not Beta; Beta has a separate citation in the citing sentence. (LLM, conf=0.82)

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  • Premisecitation

    The accumulation of memory cells at mucosal sites is critical for the control of viral pneumonia.

    “The accumulation of memory cells at mucosal sites is critical for the control of viral pneumonia and their presence has been reported to be associated with less severe COVID-19 symptoms32.”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [32] Liao, M. et al. Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19. Nat. Med. 26, 842–844 (2020). source

      The paper’s T-cell discussion reports that memory T-cell responses are necessary for resolving SARS-CoV infection in mice. Its results also find more expanded CD8+ T cells with tissue-resident features in bronchoalveolar samples from moderate than severe COVID-19 cases. These passages support a role for local T cells, but do not establish that accumulation of memory cells at mucosal sites is critical for controlling viral pneumonia generally. Page numbers are unavailable in our copy. (LLM, conf=0.84)

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  • Premisecitation

    The mRNA CV2CoV vaccine does not include chemically modified nucleosides.

    “does not include chemically modified nucleosides, as previously described10.”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [10] Roth, N. et al. Optimised non-coding regions of mRNA SARS-CoV-2 vaccine CV2CoV improves homologous and heterologous neutralising antibody responses. Vaccines 10, 1251 (2022). source
  • May combine two claims. 14
  • Classified as probably not a substantial claim. 20
  • May combine two claims.

    Premisecitation

    K18-hACE2 transgenic mice have a human ACE2 receptor which is the major cell entry receptor for SARS-CoV-2.

    “These transgenic mice have a human ACE2 receptor which is the major cell entry receptor for SARS-CoV-216,17.”
    Quote in the paperSubstantial claim2 of 2 sources checked
    • cites [16] Scialo, F. et al. ACE2: the major cell entry receptor for SARS-CoV-2. Lung 198, 867–877 (2020). source

      The Introduction states that ACE2 is used by SARS-CoV-2 to enter human cells, supporting the receptor portion of the claim. Our copy does not establish that K18-hACE2 transgenic mice carry human ACE2; searches for that mouse model and for transgenic mice expressing human ACE2 did not find it. (LLM, conf=0.88)

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    • cites [17] Winkler, E. S. et al. SARS-CoV-2 infection of human ACE2-transgenic mice causes severe lung inflammation and impaired function. Nat. Immunol. 21, 1327–1335 (2020). source
  • Classified as probably not a substantial claim.

    Premisecitation

    Neutralizing antibodies correlate with protection against COVID-19.

    “Antibodies are critical for defence against viruses and nAbs have been shown to correlate with protection against COVID-1918,19 to inform immunization schedules20.”
    Quote in the paperSubstantial claim1 of 2 sources checked
    • cites [18] Plotkin, S. A. Correlates of protection induced by vaccination. Clin. Vaccin. Immunol. 17, 1055–1065 (2010). source
    • cites [19] Khoury, D. S. et al. Neutralizing antibody levels are highly predictive of immune protection from symptomatic SARS-CoV-2 infection. Nat. Med. 27, 1205–1211 (2021). source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    Prototypes of multivalent nanoparticle vaccines induce broad reactivity against different sarbecoviruses.

    “For example, prototypes of multivalent nanoparticle vaccines have been reported to induce broad reactivity against different sarbecoviruses7.”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [7] Walls, A. C. et al. Elicitation of broadly protective sarbecovirus immunity by receptor-binding domain nanoparticle vaccines. Cell 184, 5432–5447.e5416 (2021). source
  • May combine two claims.

    Findingcitation

    0.5 μg was the lowest tested dose of CV2CoV to fully protect against lethality and induce abundant neutralizing antibodies.

    “This dosage was based on previous findings from comparative preclinical evaluations of CVnCoV and the current optimized candidate vaccine CV2CoV13, whereby 0.5 µg was the lowest tested dose to fully protect against lethality and induce abundant neutralizing antibodies (Fig. S1a) and induce detectable spike-specific interferon γ (IFNγ) producing CD8+ cells (Fig. S1b).”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [13] Hoffmann, D. et al. CVnCoV and CV2CoV protect human ACE2 transgenic mice from ancestral B BavPat1 and emerging B.1.351 SARS-CoV-2. Nat. Commun. 12, 4048 (2021). source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    Protection induced by CV2CoV is superior to CVnCoV in a non-human primate SARS-CoV-2 challenge model.

    “Protection induced by CV2CoV was reported to be superior to CVnCoV in a non-human primate SARS-CoV-2 challenge model11.”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [11] Gebre, M. S. et al. Optimization of non-coding regions for a non-modified mRNA COVID-19 vaccine. Nature 601, 410–414 (2022). source
  • May combine two claims.

    Findingown data

    Lowering the CV2CoV dose to 0.1 μg mRNA reduced levels of neutralizing antibodies and protected only 50% of challenged mice.

    “Lowering the CV2CoV dose to 0.1 µg mRNA reduced levels of neutralizing antibodies and protected only 50% of challenged mice (Fig. S1a, c), which is in line with previous studies using modified mRNA for immunization14.”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [14] Israelow, B. et al. Adaptive immune determinants of viral clearance and protection in mouse models of SARS-CoV-2. Sci. Immunol. 6, eabl4509 (2021). source
  • Classified as probably not a substantial claim.

    Premisecitation

    mRNA vaccines induce robust protection against SARS-CoV-2.

    “mRNA vaccines are promising candidates for future vaccine approaches, based on their demonstrated ability to induce robust protection against SARS-CoV-28.”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [8] Turner, J. S. et al. SARS-CoV-2 mRNA vaccines induce persistent human germinal centre responses. Nature 596, 109–113 (2021). source
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Premisecitation

    CV2CoV induces high neutralizing antibodies in rats and non-human primates, with titers comparable to those seen with Comirnaty.

    “CV2CoV has now entered clinical testing (NCT05260437) and has been shown to induce high neutralizing antibodies in rats10 and non-human primates11, with titers comparable to those seen with Comirnaty, a licensed mRNA COVID-19 vaccine.”
    Quote in the paperNot a substantial claim2 of 2 sources checked
    • cites [10] Roth, N. et al. Optimised non-coding regions of mRNA SARS-CoV-2 vaccine CV2CoV improves homologous and heterologous neutralising antibody responses. Vaccines 10, 1251 (2022). source

      Results §3.3 reports high neutralising-antibody titres in CV2CoV-vaccinated rats. The Discussion §4 mentions non-human-primate findings from a prior study, but this paper does not report a comparison of CV2CoV titres with Comirnaty; its direct comparator is CVnCoV. (LLM, conf=0.88)

      Experimental — accuracy not yet measured
    • cites [11] Gebre, M. S. et al. Optimization of non-coding regions for a non-modified mRNA COVID-19 vaccine. Nature 601, 410–414 (2022). source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    The optimised non-coding regions of mRNA SARS-CoV-2 vaccine CV2CoV improve homologous and heterologous neutralising antibody responses in rats and non-human primates, compared with CVnCoV and other modified mRNA vaccines.

    “The optimised non-coding regions of mRNA SARS-CoV-2 vaccine CV2CoV have previously been shown to improve homologous and heterologous neutralising antibody responses in rats and non-human primates, compared with CVnCoV and other modified mRNA vaccines10,11.”
    Quote in the paperNot a substantial claim2 of 2 sources checked
    • cites [10] Roth, N. et al. Optimised non-coding regions of mRNA SARS-CoV-2 vaccine CV2CoV improves homologous and heterologous neutralising antibody responses. Vaccines 10, 1251 (2022). source

      The Abstract and Discussion (page numbers unavailable) report stronger homologous and variant cross-neutralising responses with CV2CoV than with CVnCoV in rats. The Discussion also reports consistent findings from a non-human-primate study. This paper does not establish that CV2CoV outperformed other modified mRNA vaccines. (LLM, conf=0.87)

      Experimental — accuracy not yet measured
    • cites [11] Gebre, M. S. et al. Optimization of non-coding regions for a non-modified mRNA COVID-19 vaccine. Nature 601, 410–414 (2022). source

      The Vaccine immunogenicity section (page not available) reports higher neutralising antibody titres against the ancestral strain and several variants with CV2CoV than with CVnCoV in macaques. This paper does not report rat results, and it describes CV2CoV responses as comparable—not superior—to those induced by the modified mRNA vaccine BNT162b2. (LLM, conf=0.88)

      Experimental — accuracy not yet measured
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    TRM cells are induced by high concentration mRNA vaccines.

    “While TRM cells are induced by high concentration mRNA vaccines31; we report that lower concentrations of unmodified mono- or bivalent mRNA vaccines induced lung parenchymal tissue resident T cells.”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [31] Ying, B. et al. Protective activity of mRNA vaccines against ancestral and variant SARS-CoV-2 strains. Sci. Transl. Med. 14, eabm3302 (2022). source

      The Results section on immunogenicity in K18-hACE2 mice reports CD8+ and CD4+ T-cell responses in the spleen after a 5 μg mRNA vaccine dose. The Methods section describes testing splenocytes, not tissue-resident memory (TRM) cells. Searches for TRM cells and lung-resident T cells found no passage establishing that high-dose vaccination induced them. (LLM, conf=0.76)

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  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    The presence of memory cells at mucosal sites is associated with less severe COVID-19 symptoms.

    “The accumulation of memory cells at mucosal sites is critical for the control of viral pneumonia and their presence has been reported to be associated with less severe COVID-19 symptoms32.”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [32] Liao, M. et al. Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19. Nat. Med. 26, 842–844 (2020). source

      In the main text (page unavailable), the paper reports more highly expanded CD8+ T cells with tissue-resident features in bronchoalveolar lavage fluid from moderate than from severe/critical COVID-19 cases. This supports an association between a local T-cell phenotype and disease severity, but the paper describes these cells as effectors with tissue-resident features, not as confirmed memory cells, and compares severity categories rather than symptom levels. (LLM, conf=0.82)

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  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    Quantification of TRM cells has yielded variable results using different modified mRNA vaccine constructs in a mouse model, ranging from detection in the lungs to absence in the same tissue despite using much higher doses of 2-5 μg.

    “Quantification of TRM cells has yielded variable results, as reported by others, using different modified mRNA vaccine constructs in a mouse model, ranging from their detection in the lungs14 to absence in the same tissue15 despite using it at much higher doses of 2–5 µg.”
    Quote in the paperNot a substantial claim2 of 2 sources checked
    • cites [14] Israelow, B. et al. Adaptive immune determinants of viral clearance and protection in mouse models of SARS-CoV-2. Sci. Immunol. 6, eabl4509 (2021). source

      The Main Text reports that vaccinated mice did not develop high levels of lung-resident memory T cells, supporting the absence attributed to this source. But it specifies a 1 µg Pfizer-BioNTech mRNA vaccine dose, not the claimed 2–5 µg; the separate citation for detection in lungs is outside this verdict. (LLM, conf=0.90)

      Experimental — accuracy not yet measured
    • cites [15] Li, C. et al. Mechanisms of innate and adaptive immunity to the Pfizer-BioNTech BNT162b2 vaccine. Nat. Immunol. 23, 543–555 (2022). source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    Multivalent influenza and cytomegalovirus mRNA vaccines have shown that integration of multiple antigens can lead to robust nAb responses in pre-clinical models which correlate with protection for multiple vaccines.

    “Multivalent influenza21 and cytomegalovirus22 mRNA vaccines have shown that integration of multiple antigens can lead to robust nAb responses in pre-clinical models which correlate with protection for multiple vaccines18,23.”
    Quote in the paperNot a substantial claim3 of 4 sources checked
    • cites [21] Chivukula, S. et al. Development of multivalent mRNA vaccine candidates for seasonal or pandemic influenza. NPJ Vaccines 6, 1–15 (2021). source
    • cites [22] John, S. et al. Multi-antigenic human cytomegalovirus mRNA vaccines that elicit potent humoral and cell-mediated immunity. Vaccine 36, 1689–1699 (2018). source
    • cites [18] Plotkin, S. A. Correlates of protection induced by vaccination. Clin. Vaccin. Immunol. 17, 1055–1065 (2010). source
    • cites [23] Kent, S. J. et al. Disentangling the relative importance of T cell responses in COVID-19: leading actors or supporting cast? Nat. Rev. Immunol. 22, 387–397 (2022). source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    Interest in vaccine-elicited T cell responses has increased due to immune escape by variants, such as Omicron.

    “Interest in vaccine-elicited T cell responses has increased due to immune escape by variants, such as Omicron29.”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [29] Tarke, A. et al. SARS-CoV-2 vaccination induces immunological T cell memory able to cross-recognize variants from Alpha to Omicron. Cell 185, 847–859.e811 (2022). source
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Premisecitation

    Viral-vector and mRNA vaccines elicit long-lasting S-specific or nucleoprotein-specific CD4+ and CD8+ T cell responses, with broad cross-reactivity against VOCs.

    “In addition to humoral responses, cellular immunity contributes to protection against COVID-19 and recent evidence suggests that viral-vector and mRNA vaccines elicit long-lasting S-specific or nucleoprotein-specific CD4+ and CD8+ T cell responses, with broad cross-reactivity against VOCs29,30.”
    Quote in the paperNot a substantial claim2 of 2 sources checked
    • cites [29] Tarke, A. et al. SARS-CoV-2 vaccination induces immunological T cell memory able to cross-recognize variants from Alpha to Omicron. Cell 185, 847–859.e811 (2022). source

      The Results section reports spike-specific CD4+ and CD8+ T-cell responses after mRNA and adenoviral-vector vaccination that largely cross-recognized variants. It also documents memory responses about six months after vaccination, but that later cohort received mRNA vaccines. The paper does not show vaccine-elicited nucleoprotein-specific responses or establish similarly lasting responses for the viral-vector vaccine. (LLM, conf=0.87)

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    • cites [30] Hajnik, R. L. et al. Dual spike and nucleocapsid mRNA vaccination confer protection against SARS-CoV-2 Omicron and Delta variants in preclinical models. Sci. Transl. Med. 14, eabq1945 (2022). source

      The Results report that combined mRNA-S+N vaccination elicited S- and N-specific CD4+ and CD8+ T-cell responses in mice at week 5. The Discussion reports cross-recognition of Omicron by S-specific T cells after infection or vaccination, but does not establish broad cross-reactivity of the vaccine-induced responses; it explicitly says their durability remains to be assessed. The paper also does not demonstrate long-lasting T-cell responses from viral-vector vaccines. (LLM, conf=0.90)

      Experimental — accuracy not yet measured
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    CD8+ T cells contribute to virological control of SARS-CoV-2 infection when antibody titres are sub-optimal in non-human primates.

    “CD8+ T cells have been shown to contribute to virological control of SARS-CoV-2 infection when antibodies titres were sub-optimal in non-human primates33,34.”
    Quote in the paperNot a substantial claim2 of 2 sources checked
    • cites [33] McMahan, K. et al. Correlates of protection against SARS-CoV-2 in rhesus macaques. Nature 590, 630–634 (2021). source
    • cites [34] Liu, J. et al. CD8 T cells contribute to vaccine protection against SARS-CoV-2 in macaques. Sci. Immunol. 7, eabq7647 (2022). source
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Premisecitation

    Modified bivalent mRNA SARS-CoV-2 vaccines elicited significantly higher nAb responses against recent SARS-CoV-2 variants and non-inferior titres against ancestral virus compared with monovalent vaccines in humans and preclinical animal models.

    “In addition, modified bivalent mRNA SARS-CoV-2 vaccines elicited significantly higher nAb responses against recent SARS-CoV-2 variants and non-inferior titres against ancestral virus compared with monovalent vaccines in humans and preclinical animal models9,24.”
    Quote in the paperNot a substantial claim2 of 2 sources checked
    • cites [9] Scheaffer, S. M. et al. Bivalent SARS-CoV-2 mRNA vaccines increase breadth of neutralization and protect against the BA.5 Omicron variant. Nat. Med. https://doi.org/10.1038/s41591-022-02092-8 (2022). source

      The Results sections on preclinical vaccination and boosting report stronger neutralization of Omicron variants by bivalent vaccines than by ancestral monovalent mRNA-1273 in mice. The study did not test humans; the Discussion only says its findings are consistent with human serum data from other studies. It also does not establish non-inferiority of ancestral-virus titres, and notes that some variant comparisons did not reach statistical significance. Page numbers are unavailable in our copy. (LLM, conf=0.88)

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    • cites [24] Chalkias, S. et al. A bivalent Omicron-containing booster vaccine against Covid-19. N. Engl. J. Med. 387, 1279–1291 (2022). source

      Split into 2 atoms — 0 confirmed, 2 partially supported, 0 disputed, 0 misattributed, 0 unverifiable. Expand the claim to see per-atom verdicts.

      Experimental — accuracy not yet measured
  • Classified as probably not a substantial claim.

    Premisecitation

    Neutralizing antibodies are one of the key parameters correlating with the observed protective efficacy of the first-generation SARS-CoV-2 mRNA vaccine CVnCoV and a licensed COVID-19 mRNA vaccine.

    “Neutralizing antibodies in the sera of the participants will be assessed since they have been identified as one of the key parameters correlating with the observed protective efficacy of the first generation SARS-CoV-2 mRNA vaccine CVnCoV27, and a licensed COVID-19 mRNA vaccine28.”
    Quote in the paperSubstantial claim2 of 2 sources checked
    • cites [27] Cromer, D. et al. Relating in vitro neutralization level and protection in the CVnCoV (CUREVAC) trial. Clin. Infect. Dis. 75, e878–e879 (2022). source
    • cites [28] Gilbert, P. B. et al. Immune correlates analysis of the mRNA-1273 COVID-19 vaccine efficacy clinical trial. Science 375, 43–50 (2022). source
  • May combine two claims.

    Premisecitation

    Depletion of CD8+ T cells following immunization with mRNA vaccine, prior to SARS-CoV-2 challenge, led to different outcomes in a transgenic mouse model, possibly due to the vaccine dose used and variability in nAb concentrations.

    “Depletion of CD8+ T cells following immunization with mRNA vaccine, prior to SARS-CoV-2 challenge, led to different outcomes in a transgenic mouse model, possibly due to the vaccine dose used and variability in nAb concentrations14,35.”
    Quote in the paperNot a substantial claim2 of 2 sources checked
    • cites [14] Israelow, B. et al. Adaptive immune determinants of viral clearance and protection in mouse models of SARS-CoV-2. Sci. Immunol. 6, eabl4509 (2021). source

      The Main Text (Fig. 4 discussion; page unavailable) describes CD8+ T-cell depletion before SARS-CoV-2 challenge in mRNA-vaccinated K18-hACE2 transgenic mice. It reports similar disease protection and viral RNA levels in depleted and control mice, not a different outcome caused by depletion. The paper specifies a 1 µg vaccine dose but does not attribute differing outcomes to dose or variability in neutralizing-antibody concentrations. (LLM, conf=0.86)

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    • cites [35] de Alwis, R. et al. A single dose of self-transcribing and replicating RNA-based SARS-CoV-2 vaccine produces protective adaptive immunity in mice. Mol. Ther. 29, 1970–1983 (2021). source

      The Results section (page unavailable) reports that CD8+ T-cell depletion before SARS-CoV-2 challenge caused breakthrough infection in vaccinated hACE2 transgenic mice, and specifies a reduced 1 μg vaccine dose. The paper does not attribute differing outcomes between studies to vaccine dose or variability in neutralizing-antibody concentrations; that proposed explanation is not supported by this source. (LLM, conf=0.85)

      Experimental — accuracy not yet measured
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Premisecitation

    Repeated immunization extends neutralization to non-homologous variants, possibly through affinity maturation of memory B cell populations.

    “Recent studies have revealed that repeated immunization extends neutralization to non-homologous variants, possibly through affinity maturation of memory B cell populations12,25.”
    Quote in the paperNot a substantial claim2 of 2 sources checked
    • cites [12] Dejnirattisai, W. et al. SARS-CoV-2 Omicron-B.1.1.529 leads to widespread escape from neutralizing antibody responses. Cell 185, 467–484.e415 (2022). source

      The Results section, “Increased neutralization of Omicron by third-dose booster vaccination” (page unavailable), reports higher Omicron-neutralization titers after a third vaccine dose, supporting the claim that repeated immunization improves neutralization of a non-homologous variant. The paper does not attribute that improvement to affinity maturation of memory B cells; that proposed mechanism is unsupported by our copy. (LLM, conf=0.86)

      Experimental — accuracy not yet measured
    • cites [25] Gruell, H. et al. mRNA booster immunization elicits potent neutralizing serum activity against the SARS-CoV-2 Omicron variant. Nat. Med. 28, 477–480 (2022). source

      The Main section reports that a BNT162b2 booster substantially increased serum neutralization against Omicron and speculates that ongoing affinity maturation may explain the response. It does not identify memory B cell populations as the mechanism or establish the effect across multiple non-homologous variants; the measured booster response here is to Omicron. No page number is provided in our copy. (LLM, conf=0.85)

      Experimental — accuracy not yet measured
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    Cellular immunity contributes to protection against COVID-19.

    “In addition to humoral responses, cellular immunity contributes to protection against COVID-19 and recent evidence suggests that viral-vector and mRNA vaccines elicit long-lasting S-specific or nucleoprotein-specific CD4+ and CD8+ T cell responses, with broad cross-reactivity against VOCs29,30.”
    Quote in the paperNot a substantial claim2 of 2 sources checked
    • cites [29] Tarke, A. et al. SARS-CoV-2 vaccination induces immunological T cell memory able to cross-recognize variants from Alpha to Omicron. Cell 185, 847–859.e811 (2022). source

      The Introduction (page unavailable) says several lines of evidence point to potential roles for T cells in reducing COVID-19 severity and contributing to protection. That supports the direction of the claim, but the citing sentence states the contribution as established, whereas the source qualifies it as potential. (LLM, conf=0.84)

      Experimental — accuracy not yet measured
    • cites [30] Hajnik, R. L. et al. Dual spike and nucleocapsid mRNA vaccination confer protection against SARS-CoV-2 Omicron and Delta variants in preclinical models. Sci. Transl. Med. 14, eabq1945 (2022). source
  • May combine two claims.

    Findingown data

    Anti-RBD total immunoglobulin levels were high in all vaccinated mice, with no notable differences between groups.

    “In our study, anti-RBD total immunoglobulin levels were high in all vaccinated mice, with no notable differences between groups (Fig. S3e, f).”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    S-peptide specific IFNy+ CD4+ T cells were detectable, but did not correlate with the frequency of CD4+ TRM cells.

    “S-peptide specific IFNy+ CD4+ T cells were detectable, but did not correlate with the frequency of CD4+ TRM cells (Fig. S8f, g).”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductown data

    The limit of detection of the RT-qPCR assay was 1 genome copy/μl RNA.

    “The limit of detection was calculated to be 1 genome copy/µl RNA.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Interpretationreasoning

    Dose-sparing, multivalent vaccines combining mRNA encoding the S-protein from variants with unrelated lineages may induce heterologous protection and increase the breadth of immune responses.

    “Results suggest that dose-sparing, multivalent vaccines, combining mRNA encoding the S-protein from variants with unrelated lineages may induce heterologous protection and thus increase the breadth of immune responses.”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S2 (checkable). May combine two claims.

    Interpretationreasoning

    Preservation of the epitope repertoire may be critical for defence against current and future variants and may bring substantial benefits by contributing to protection against severe disease.

    “Preservation of the epitope repertoire may be critical for defence against current and future variants and may bring substantial benefits by contributing to protection against severe disease.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S2 (checkable), S3 (load-bearing), S4 (based). May combine two claims.

    Interpretationnone given

    Given their exceptional flexibility for antigen formulation, mRNA vaccine platforms offer advantages regarding adaptability to circulating and emerging variants, and opportunities for designing pan-sarbecovirus vaccines.

    “Given their exceptional flexibility for antigen formulation, mRNA vaccine platforms offer advantages regarding adaptability to circulating and emerging variants, and opportunities for designing pan-sarbecovirus vaccines.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Interpretationown data

    Blending mRNA coding for the spike protein of different variants, including the Beta spike protein, elicited antibodies with substantial breadth and the potential to neutralize newly emerging variants such as BA.5.

    “In line with these findings, our study demonstrated that blending mRNA coding for the spike protein of different variants, including the Beta spike protein, elicited antibodies with substantial breadth and the potential to neutralize newly emerging variants such as BA.5.”
    Quote in the paperSubstantial claim
28 of 28
  • The paper relies on this without support.

    New escape variants of SARS-CoV-2 will emerge in the future.

    “The evolution of further VOCs is unpredictable; however, it is likely that new escape variants will emerge.”
1 of 1

Cites

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9 of the 47 references couldn’t be matched to a known paper.

Cited by

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Authors
Corleis, B., Hoffmann, D., Rauch, S., Fricke, C., Roth, N., Gergen, J., Kovacikova, K., Schlottau, K., Halwe, N. J., Ulrich, L., Schön, J., Wernike, K., Widera, M., Ciesek, S., Mueller, S. O., Mettenleiter, T. C., Maione, D., Petsch, B., Beer, M., & Dorhoi, A.
Affiliations
  • Friedrich-Loeffler-Institut (DE)
  • CureVac (Germany) (DE)
  • Goethe University Frankfurt (DE)
  • GlaxoSmithKline (Italy) (IT)
Corresponding author
  • Beer, Martin
  • Dorhoi, Anca
Venue
Nature Communications
Published
2023-02-13
Volume
14
Issue
1
Pages
816-816
ISSN
2041-1723 (ISSN-L)
OpenAlex
W4320483863
Cited by
22
References
47
Citations by year
2026: 2 · 2025: 2 · 2024: 13 · 2023: 5
FWCI
4.21
Type
journal article
Language
en
Open access
Locations
  • Nature Communications (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • PubMed Central (submittedVersion, cc-by)
  • RePEc: Research Papers in Economics (submittedVersion)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
  • Fraunhofer-Publica (Fraunhofer-Gesellschaft) (submittedVersion)
  • OpenAgrar (submittedVersion, cc-by)
Funders
  • Bundesministerium für Bildung und Forschung (01KI20703, SARS-CoV-2)
  • Bundesministerium für Ernährung und Landwirtschaft
Topics
  • Health Sciences › Medicine › Infectious Diseases › SARS-CoV-2 and COVID-19 Research
  • Life Sciences › Agricultural and Biological Sciences › Animal Science and Zoology › Animal Virus Infections Studies
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › vaccines and immunoinformatics approaches
Keywords
bivalent mRNA vaccine, SARS-CoV-2 variants, spike protein, Beta variant, Delta variant, neutralizing antibodies, CD8+ T cells, CD4+ T cells, viral replication, transgenic mouse model, Wistar rat model, multivalent vaccine, COVID-19 vaccine coverage
MeSH terms
COVID-19, SARS-CoV-2, COVID-19 Vaccines, mRNA Vaccines, Animals, Antibodies, Viral, Female, Mice, Transgenic, Rats, Wistar, Vaccines, Combined, CD8-Positive T-Lymphocytes, Models, Animal, Mice, Rats, Antibodies, Neutralizing, Spike Glycoprotein, Coronavirus

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Claims read by deepseek-v4.1-flash under definition version 3 (extract-v3) on 2026-10-11.

Classified by jev-1.13-20260917 (gold-guideline-v0.2) on 2026-10-11.

Cited sources are checked by gpt-6-sol.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

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