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Revisiting Global Gene Expression Analysis

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Oncogenic and drug-sensitive NTRK1 rearrangements in lung cancer

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deFuse: An Algorithm for Gene Fusion Discovery in Tumor RNA-Seq Data

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De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweetpotato (Ipomoea batatas)

Wang, Z., Fang, B., Chen, J., Zhang, X., Luo, Z., Huang, L., Chen, X., & Li, Y. (2010) · BMC Genomics · doi:10.1186/1471-2164-11-726 · Cited by 433 · see citing works

RNA-seq of 272 gliomas revealed a novel, recurrent PTPRZ1-MET fusion transcript in secondary glioblastomasPreprint

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Next-generation sequencing in the clinic: Promises and challenges

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Making sense of cancer genomic dataPreprint

Chin, L., Hahn, W. C., Getz, G. A., & Meyerson, M. M. (2011) · Genes & Development · doi:10.1101/gad.2017311 · Cited by 336 · see citing works

Identification of fusion genes in breast cancer by paired-end RNA-sequencing

Edgren, H., Murumägi, A., Kangaspeska, S., Nicorici, D., Hongisto, V., Sahlberg, K. K., Rye, I. H., Nyberg, S., Wolf, M., Børresen‐Dale, A., et al. (2011) · Genome biology · doi:10.1186/gb-2011-12-1-r6 · Cited by 313 · see citing works

Progressive increase in mtDNA 3243A>G heteroplasmy causes abrupt transcriptional reprogramming

Picard, M. A., Zhang, J., Hancock, S. A., Derbeneva, O. A., Golhar, R., Golik, P., O’Hearn, S. F., Levy, S., Potluri, P., Lvova, M., et al. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1414028111 · Cited by 311 · see citing works

High‐throughput sequencing for biology and medicine

Soon, W. W., Hariharan, M., & Snyder, M. P. (2013) · Molecular Systems Biology · doi:10.1038/msb.2012.61 · Cited by 302 · see citing works

Advanced Applications of RNA Sequencing and Challenges

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FusionMap: detecting fusion genes from next-generation sequencing data at base-pair resolution

Ge, H., Liu, K., Juan, T., Fang, F., Newman, M., & Hoeck, W. G. (2011) · Bioinformatics · doi:10.1093/bioinformatics/btr310 · Cited by 280 · see citing works

BRAF^V600E remodels the melanocyte transcriptome and induces <i>BANCR</i> to regulate melanoma cell migration

Flockhart, R. J., Webster, D. E., Qu, K., Mascarenhas, N., Kovalski, J., Kretz, M., & Khavari, P. A. (2012) · Genome Research · doi:10.1101/gr.140061.112 · Cited by 277 · see citing works

A multi-split mapping algorithm for circular RNA, splicing, trans-splicing and fusion detection

Hoffmann, S., Otto, C., Doose, G., Andrea Tanzer, A., Langenberger, D., Christ, S., Kunz, M., Holdt, L. M., Teupser, D., Jörg Hackermüller, A., et al. (2014) · Genome biology · doi:10.1186/gb-2014-15-2-r34 · Cited by 271 · see citing works

RNA-Seq and human complex diseases: recent accomplishments and future perspectives

Costa, V., Aprile, M., Esposito, R., & Ciccodicola, A. (2012) · European Journal of Human Genetics · doi:10.1038/ejhg.2012.129 · Cited by 266 · see citing works

Bioinformatics and Drug Discovery

Xia, X. (2017) · Current Topics in Medicinal Chemistry · doi:10.2174/1568026617666161116143440 · Cited by 256 · see citing works

De novo assembly and characterization of bark transcriptome using Illumina sequencing and development of EST-SSR markers in rubber tree (Hevea brasiliensis Muell. Arg.)

Li, D., Deng, Z., Qin, B., Liu, X., & Men, Z. (2012) · BMC Genomics · doi:10.1186/1471-2164-13-192 · Cited by 246 · see citing works

TumorFusions: an integrative resource for cancer-associated transcript fusions

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Discovering chimeric transcripts in paired-end RNA-seq data by using EricScript

Benelli, M., Pescucci, C., Marseglia, G., Severgnini, M., Torricelli, F., & Magi, A. (2012) · Bioinformatics · doi:10.1093/bioinformatics/bts617 · Cited by 220 · see citing works

Transcriptome characterization by RNA sequencing identifies a major molecular and clinical subdivision in chronic lymphocytic leukemia

Ferreira, P. G., Jares, P., Rico, D., Gómez-López, G., Martínez-Trillos, A., Villamor, N., Ecker, S., González-Pérez, A., Knowles, D. G., Monlong, J., et al. (2014) · Genome Research · doi:10.1101/gr.152132.112 · Cited by 214 · see citing works

SOAPfuse: an algorithm for identifying fusion transcripts from paired-end RNA-Seq data

Jia, W., Qiu, K., He, M., Song, P., Zhou, Q., Zhou, F., Yu, Y., Zhu, D., Nickerson, M. L., Wan, S., et al. (2013) · Genome biology · doi:10.1186/gb-2013-14-2-r12 · Cited by 206 · see citing works

Discovery of non-ETS gene fusions in human prostate cancer using next-generation RNA sequencingPreprint

Pflueger, D., Terry, S., Sboner, A., Habegger, L., Esgueva, R., Lin, P.-C., Svensson, M. A., Kitabayashi, N., Moss, B. J., MacDonald, T. Y., et al. (2010) · Genome Research · doi:10.1101/gr.110684.110 · Cited by 197 · see citing works

Oncocers: ceRNA-mediated cross-talk by sponging miRNAs in oncogenic pathways

Ergün, S., & Öztuzcu, S. (2015) · Tumor Biology · doi:10.1007/s13277-015-3346-x · Cited by 190 · see citing works

Integrated genomic analysis of relapsed childhood acute lymphoblastic leukemia reveals therapeutic strategies

Hogan, L. E., Meyer, J. A., Yang, J. J. J., Wang, J., Wong, N. C., Yang, W., Condos, G. J., Hunger, S. P., Raetz, E. A., Saffery, R., et al. (2011) · Blood · doi:10.1182/blood-2011-04-345595 · Cited by 189 · see citing works

SOX2 and p63 colocalize at genetic loci in squamous cell carcinomas

Watanabe, H., Ma, Q., Peng, S., Adelmant, G., Swain, D., Song, W., Fox, C., Francis, J. M., Pedamallu, C. S., DeLuca, D. S., et al. (2014) · Journal of Clinical Investigation · doi:10.1172/jci71545 · Cited by 185 · see citing works

Recurrent chimeric RNAs enriched in human prostate cancer identified by deep sequencing

Kannan, K. P., Wang, L., Wang, J., Ittmann, M., Li, W., & Yen, L. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1100489108 · Cited by 176 · see citing works

Next-generation sequencing and its applications in molecular diagnostics

Su, Z., Ning, B., Fang, H., Hong, H., Perkins, R., Tong, W., & Shi, L. M. (2011) · Expert Review of Molecular Diagnostics · doi:10.1586/erm.11.3 · Cited by 181 · see citing works

From human genome to cancer genome: The first decadePreprint

Wheeler, D. A., & Wang, L. (2013) · Genome Research · doi:10.1101/gr.157602.113 · Cited by 176 · see citing works

The genomic landscape of cutaneous melanoma

Zhang, T., Dutton‐Regester, K., Brown, K. M., & Hayward, N. K. (2016) · Pigment Cell & Melanoma Research · doi:10.1111/pcmr.12459 · Cited by 173 · see citing works

Raman-guided subcellular pharmaco-metabolomics for metastatic melanoma cells

Du, J., Su, Y., Qian, C., Yuan, D., Miao, K., Lee, D., Ng, A. H. C., Wijker, R. S., Ribas, A., Levine, R. D., et al. (2020) · Nature Communications · doi:10.1038/s41467-020-18376-x · Cited by 171 · see citing works

Whole genome sequencing of matched primary and metastatic acral melanomasPreprint

Turajlic, S., Furney, S. J., Lambros, M. B. K., Mitsopoulos, C., Kozarewa, I., Geyer, F. C., Mackay, A. G., Hakas, J., Zvelebil, M., Lord, C. J., et al. (2011) · Genome Research · doi:10.1101/gr.125591.111 · Cited by 159 · see citing works

Comprehensive evaluation of fusion transcript detection algorithms and a meta-caller to combine top performing methods in paired-end RNA-seq data

Liu, S., Tsai, W.-H., Ding, Y., Chen, R., Fang, Z., Huo, Z., Kim, S., Ma, T., Chang, T., Priedigkeit, N., et al. (2015) · Nucleic Acids Research · doi:10.1093/nar/gkv1234 · Cited by 163 · see citing works

Next generation sequencing in clinical medicine: Challenges and lessons for pathology and biomedical informatics

Gullapalli, R. R., Desai, K., Santana‐Santos, L., Kant, J. A., & Becich, M. J. (2012) · Journal of Pathology Informatics · doi:10.4103/2153-3539.103013 · Cited by 160 · see citing works

Landscape of gene fusions in epithelial cancers: seq and ye shall find

Kumar‐Sinha, C., Sundaram, S. K., & Chinnaiyan, A. M. (2015) · Genome Medicine · doi:10.1186/s13073-015-0252-1 · Cited by 154 · see citing works

PRADA: pipeline for RNA sequencing data analysis

Torres‐García, W., Zheng, S., Sivachenko, A., Vegesna, R., Wang, Q., Yao, R., Berger, M. F., Weinstein, J. N., Getz, G. A., & Verhaak, R. G. W. (2014) · Bioinformatics · doi:10.1093/bioinformatics/btu169 · Cited by 154 · see citing works

Comprehensive Analysis of Transcriptome Variation Uncovers Known and Novel Driver Events in T-Cell Acute Lymphoblastic Leukemia

Atak, Z. K., Gianfelici, V., Hulselmans, G. J., Keersmaecker, K. D., Devasia, A. G., Geerdens, E., Mentens, N., Chiaretti, S., Durinck, K., Uyttebroeck, A., et al. (2013) · PLoS Genetics · doi:10.1371/journal.pgen.1003997 · Cited by 146 · see citing works

Existing and Emerging Technologies for Tumor Genomic Profiling

MacConaill, L. E. (2013) · Journal of Clinical Oncology · doi:10.1200/jco.2012.46.5948 · Cited by 138 · see citing works

Altered expression pattern of circular RNAs in primary and metastatic sites of epithelial ovarian carcinoma

Ahmed, I., Karedath, T., Andrews, S., Al-Azwani, I. K., Mohamoud, Y. A., Querleu, D., Rafii, A., & Malek, J. A. (2016) · Oncotarget · doi:10.18632/oncotarget.8917 · Cited by 141 · see citing works

Pseudogenes: newly discovered players in human cancer.

Poliseno, L. (2012) · Science Signaling · doi:10.1126/scisignal.2002858 · Cited by 170 · see citing works

How Many Lymph Nodes Are Enough? Assessing the Adequacy of Lymph Node Yield for Papillary Thyroid Cancer

Robinson, T. J., Thomas, S. M., Dinan, M. A., Roman, S. A., Sosa, J. A., & Hyslop, T. (2016) · Journal of Clinical Oncology · doi:10.1200/jco.2016.67.6437 · Cited by 126 · see citing works

Hadoop-BAM: directly manipulating next generation sequencing data in the cloud

Niemenmaa, M., Kallio, A., Schumacher, A., Klemelä, P., Korpelainen, E., & Heljanko, K. (2012) · Bioinformatics · doi:10.1093/bioinformatics/bts054 · Cited by 124 · see citing works

Application of next generation sequencing to human gene fusion detection: computational tools, features and perspectives

Wang, Q., Xia, J., Jia, P., Pao, W. J., & Zhao, Z. (2012) · Briefings in Bioinformatics · doi:10.1093/bib/bbs044 · Cited by 119 · see citing works

Breakpoint Analysis of Transcriptional and Genomic Profiles Uncovers Novel Gene Fusions Spanning Multiple Human Cancer Types

Giacomini, C. P., Sun, S., Varma, S., Shain, A. H., Giacomini, M. M., Balagtas, J. M. S., Sweeney, R. T., Lai, E., Fitz, C. D. V., Forster, A. D., et al. (2013) · PLoS Genetics · doi:10.1371/journal.pgen.1003464 · Cited by 115 · see citing works

Genome-wide siRNA screen for mediators of NF-κB activation

Gewurz, B. E., Towfic, F., Mar, J. C., Shinners, N. P., Takasaki, K., Zhao, B., Cahir-McFarland, E. D., Quackenbush, J., Xavier, R. J., & Kieff, E. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1120542109 · Cited by 108 · see citing works

Omics Profiling in Precision Oncology

Yu, K., & Snyder, M. P. (2016) · Molecular & Cellular Proteomics · doi:10.1074/mcp.o116.059253 · Cited by 108 · see citing works

Opportunities and methods for studying alternative splicing in cancer with RNA-Seq

Feng, H., Qin, Z., & Zhang, X. (2012) · Cancer Letters · doi:10.1016/j.canlet.2012.11.010 · Cited by 105 · see citing works

RNA-Seq analyses generate comprehensive transcriptomic landscape and reveal complex transcript patterns in hepatocellular carcinoma

Huang, Q., Lin, B., Liu, H., Ma, X., Mo, F., Yu, W., Li, L., Li, H., Tian, T., Wu, D., et al. (2011) · PLoS ONE · doi:10.1371/journal.pone.0026168 · Cited by 104 · see citing works

Identifying fusion transcripts using next generation sequencing

Kumar, S., Razzaq, S. K., Vo, A. D., Gautam, M., & Li, H. (2016) · Wiley Interdisciplinary Reviews - RNA · doi:10.1002/wrna.1382 · Cited by 100 · see citing works

SMOOTH-seq: single-cell genome sequencing of human cells on a third-generation sequencing platform

Fan, X., Yang, C. Y., Li, W., Bai, X., Zhou, X., Xie, H., Wen, L., & Tang, F. (2021) · Genome biology · doi:10.1186/s13059-021-02406-y · Cited by 95 · see citing works

State-of-the-Art Fusion-Finder Algorithms Sensitivity and Specificity

Carrara, M., Beccuti, M., Lazzarato, F., Cavallo, F., Cordero, F., Donatelli, S., & Calogero, R. (2013) · BioMed Research International · doi:10.1155/2013/340620 · Cited by 94 · see citing works

microRNAs and ceRNAs: RNA networks in pathogenesis of cancer.

Su, X., Xing, J., Wang, Z., Chen, L., Cui, M., & Jiang, B. (2013) · Europe PMC (PubMed Central) · doi:10.3978/j.issn.1000-9604.2013.03.08 · Cited by 91 · see citing works

AMPKα Modulation in Cancer Progression: Multilayer Integrative Analysis of the Whole Transcriptome in Asian Gastric Cancer

Kim, Y. H., Liang, H., Liu, X., Lee, J., Choi, Y., Cheong, J., Kim, H., Li, M., Downey, T. J., Dyer, M. D., et al. (2012) · Cancer Research · doi:10.1158/0008-5472.can-11-3870 · Cited by 91 · see citing works

FusionHunter: identifying fusion transcripts in cancer using paired-end RNA-seq

Li, Y., CHIEN, J. R., Smith, D. I., & Ma, J. (2011) · Bioinformatics · doi:10.1093/bioinformatics/btr265 · Cited by 87 · see citing works

Reanalysis of RNA-Sequencing Data Reveals Several Additional Fusion Genes with Multiple Isoforms

Kangaspeska, S., Hultsch, S., Edgren, H., Nicorici, D., Murumägi, A., & Kallioniemi, O. (2012) · PLoS ONE · doi:10.1371/journal.pone.0048745 · Cited by 85 · see citing works

Exploration of the gene fusion landscape of glioblastoma using transcriptome sequencing and copy number data

Shah, N., Lankerovich, M., Lee, H., Yoon, J., Schroeder, B., & Foltz, G. (2013) · BMC Genomics · doi:10.1186/1471-2164-14-818 · Cited by 85 · see citing works

Robustness of differential gene expression analysis of RNA-seq

Stupnikov, A., McInerney, C. E., Savage, K. I., McIntosh, S., Emmert‐Streib, F., Kennedy, R. D., Salto‐Tellez, M., Prise, K. M., & McArt, D. G. (2021) · Computational and Structural Biotechnology Journal · doi:10.1016/j.csbj.2021.05.040 · Cited by 82 · see citing works

Novel fusion transcripts in human gastric cancer revealed by transcriptome analysis

Kim, H.-P., Cho, G. J., Han, S.-W., Shin, J.-Y., Jeong, E.-G., Song, S.-H., Lee, W.-C., Lee, K.-H., Bang, D., Seo, J.-S., et al. (2013) · Oncogene · doi:10.1038/onc.2013.490 · Cited by 82 · see citing works

Characterization of the Miiuy Croaker (Miichthys miiuy) Transcriptome and Development of Immune-Relevant Genes and Molecular Markers

Che, R., Sun, Y., SUN, D.-Q., & Xu, T. (2014) · PLoS ONE · doi:10.1371/journal.pone.0094046 · Cited by 81 · see citing works

Genome-wide analysis of microRNA and mRNA expression signatures in cancer

Li, M., Fu, S., & Xiao, H. (2015) · Acta Pharmacologica Sinica · doi:10.1038/aps.2015.67 · Cited by 80 · see citing works

The Growing Importance of CNVs: New Insights for Detection and Clinical Interpretation

Valsesia, A., Macé, A., Jacquemont, S., Beckmann, J., & Kutalik, Z. (2013) · Frontiers in Genetics · doi:10.3389/fgene.2013.00092 · Cited by 72 · see citing works

Transcriptome Profiling of the Cancer, Adjacent Non-Tumor and Distant Normal Tissues from a Colorectal Cancer Patient by Deep Sequencing

Wu, Y., Wang, X., Wu, F., Huang, R., Xue, F., Liang, G., Tao, M., Cai, P., & Huang, Y. (2012) · PLoS ONE · doi:10.1371/journal.pone.0041001 · Cited by 75 · see citing works

TGF-β Signaling, Activated Stromal Fibroblasts, and Cysteine Cathepsins B and L Drive the Invasive Growth of Human Melanoma Cells

Yin, M., Soikkeli, J., Jahkola, T., Virolainen, S., Saksela, O., & Hölttä, E. (2012) · American Journal Of Pathology · doi:10.1016/j.ajpath.2012.08.027 · Cited by 74 · see citing works

Integrated genome and transcriptome sequencing identifies a novel form of hybrid and aggressive prostate cancer

Wu, C., Wyatt, A. W., Lapuk, A. V., McPherson, A., McConeghy, B. J., Bell, R. H., Anderson, S. A., Haegert, A. M., Brahmbhatt, S., Shukin, R. J., et al. (2012) · The Journal of Pathology · doi:10.1002/path.3987 · Cited by 73 · see citing works

Use of blood-based biomarkers for early diagnosis and surveillance of colorectal cancer

Ganepola, G. A. P. (2014) · World Journal of Gastrointestinal Oncology · doi:10.4251/wjgo.v6.i4.83 · Cited by 73 · see citing works

Intergenic disease-associated regions are abundant in novel transcripts

Bartoniček, N., Clark, M. B., Quek, X. C., Torpy, J., Pritchard, A. L., Mååg, J. L. V., Gloss, B., Crawford, J., Taft, R. J., Hayward, N. K., et al. (2017) · Genome biology · doi:10.1186/s13059-017-1363-3 · Cited by 69 · see citing works

nFuse: Discovery of complex genomic rearrangements in cancer using high-throughput sequencingPreprint

McPherson, A., Wu, C., Wyatt, A. W., Shah, S. P., Collins, C. C., & Şahinalp, S. C. (2012) · Genome Research · doi:10.1101/gr.136572.111 · Cited by 72 · see citing works

The three M’s: melanoma, microphthalmia‐associated transcription factor and microRNA

Bell, R. E., & Levy, C. (2011) · Pigment Cell & Melanoma Research · doi:10.1111/j.1755-148x.2011.00931.x · Cited by 68 · see citing works

Comprehensive molecular screening: from the RT-PCR to the RNA-seq.

Costa, C., Giménez-Capitán, A. A., Karachaliou, N., & Rosell, R. (2013) · Europe PMC (PubMed Central) · doi:10.3978/j.issn.2218-6751.2013.02.05 · Cited by 66 · see citing works

Highly sensitive profiling of CD44+/CD24− breast cancer stem cells by combining global mRNA amplification and next generation sequencing: Evidence for a hyperactive PI3K pathway

Hardt, O., Wild, S., Oerlecke, I., Hofmann, K., Luo, S., Wiencek, Y., Kantelhardt, E., Vess, C., Smith, G. P., Schroth, G. P., et al. (2012) · Cancer Letters · doi:10.1016/j.canlet.2012.06.010 · Cited by 64 · see citing works

Resistance patterns with tyrosine kinase inhibitors in melanoma

Dummer, R., & Flaherty, K. T. (2012) · Current Opinion in Oncology · doi:10.1097/cco.0b013e32834fca92 · Cited by 61 · see citing works

Transcriptome Analysis of Silver Carp (Hypophthalmichthys molitrix) by Paired-End RNA Sequencing

Fu, B., & He, S. (2012) · DNA Research · doi:10.1093/dnares/dsr046 · Cited by 61 · see citing works

InFusion: Advancing Discovery of Fusion Genes and Chimeric Transcripts from Deep RNA-Sequencing Data

Okonechnikov, K., Imai‐Matsushima, A., Paul, L., Seitz, A., Meyer, T. F., & García-Alcalde, F. (2016) · PLoS ONE · doi:10.1371/journal.pone.0167417 · Cited by 60 · see citing works

Sensitive gene fusion detection using ambiguously mapping RNA-Seq read pairs

Kinsella, M., Harismendy, O., Nakano, M., Frazer, K. A., & Bafna, V. (2011) · Bioinformatics · doi:10.1093/bioinformatics/btr085 · Cited by 58 · see citing works

scNanoHi-C: a single-cell long-read concatemer sequencing method to reveal high-order chromatin structures within individual cells

Li, W., Lu, J., Lü, P., Gao, Y., Bai, Y., Chen, K., Su, X., Li, M., Liu, J., Chen, Y., et al. (2023) · Nature Methods · doi:10.1038/s41592-023-01978-w · Cited by 59 · see citing works

BreakFusion: targeted assembly-based identification of gene fusions in whole transcriptome paired-end sequencing data

Chen, K., Wallis, J. W., Kandoth, C., Kalicki-Veizer, J., Mungall, K., Mungall, A. J. J., Jones, S. J. M., Marra, M. A., Ley, T. J., Mardis, E. R., et al. (2012) · Bioinformatics · doi:10.1093/bioinformatics/bts272 · Cited by 56 · see citing works

MDA-9 and GRP78 as potential diagnostic biomarkers for early detection of melanoma metastasis

Guan, M., Chen, X., Ma, Y., Tang, L., Guan, L., Ren, X., Yu, B., Zhang, W., & Su, B. (2014) · Tumor Biology · doi:10.1007/s13277-014-2930-9 · Cited by 56 · see citing works

Clinical Integration of Next-Generation Sequencing Technology

Gullapalli, R. R., Lyons‐Weiler, M. A., Petrosko, P., Dhir, R., Becich, M. J., & LaFramboise, W. A. (2012) · Clinics in Laboratory Medicine · doi:10.1016/j.cll.2012.07.005 · Cited by 56 · see citing works

The DEAD/DEAH box helicase, DDX11, is essential for the survival of advanced melanomas

Bhattacharya, C., Wang, X., & Becker, D. (2012) · Molecular Cancer · doi:10.1186/1476-4598-11-82 · Cited by 55 · see citing works

Visualizing Subcellular Enrichment of Glycogen in Live Cancer Cells by Stimulated Raman Scattering

Lee, D., Du, J., Yu, R., Su, Y., Heath, J. R., & Wei, L. (2020) · Analytical Chemistry · doi:10.1021/acs.analchem.0c02348 · Cited by 54 · see citing works

A Comparison of Single Molecule and Amplification Based Sequencing of Cancer Transcriptomes

Sam, L. T., Lipson, D., Raz, T., Cao, X., Thompson, J. F., Milos, P. M., Robinson, D. R., Chinnaiyan, A. M., Kumar‐Sinha, C., & Maher, C. A. (2011) · PLoS ONE · doi:10.1371/journal.pone.0017305 · Cited by 54 · see citing works

A Novel Approach for Characterizing Microsatellite Instability in Cancer Cells

Lu, Y., Soong, T. D., & Elemento, O. (2013) · PLoS ONE · doi:10.1371/journal.pone.0063056 · Cited by 54 · see citing works

Isoform level expression profiles provide better cancer signatures than gene level expression profiles

Zhang, Z., Pal, S., Bi, Y., Tchou, J. C., & Davuluri, R. V. (2013) · Genome Medicine · doi:10.1186/gm437 · Cited by 54 · see citing works

Paired-end sequencing of Fosmid libraries by IlluminaPreprint

Williams, L., Tabbaa, D., Li, N., Berlin, A. M., Shea, T., MacCallum, I., Lawrence, M. S., Drier, Y., Getz, G. A., Young, S., et al. (2012) · Genome Research · doi:10.1101/gr.138925.112 · Cited by 53 · see citing works

ESRRA-C11orf20 Is a Recurrent Gene Fusion in Serous Ovarian Carcinoma

Salzman, J., Marinelli, R. J., Wang, P., Green, A. E., Nielsen, J. S., Nelson, B. H., Drescher, C. W., & Brown, P. O. (2011) · PLoS Biology · doi:10.1371/journal.pbio.1001156 · Cited by 52 · see citing works

Research

(2015)

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