The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.
Genetic Structure of the Purebred Domestic Dog
Abstract
We used molecular markers to study genetic relationships in a diverse collection of 85 domestic dog breeds. Differences among breeds accounted for ∼30% of genetic variation. Microsatellite genotypes were used to correctly assign 99% of individual dogs to breeds. Phylogenetic analysis separated several breeds with ancient origins from the remaining breeds with modern European origins. We identified four genetic clusters, which predominantly contained breeds with similar geographic origin, morphology, or role in human activities. These results provide a genetic classification of dog breeds and will aid studies of the genetics of phenotypic breed differences.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Excoffier, L., Smouse, P. E., & Quattro, J. M. (1992) · Genetics · doi:10.1093/genetics/131.2.479 · Cited by 13,929
The sequence of the human genome
Venter, J. C., Adams, M. D., Myers, E. W., Li, P. W., Mural, R. J., Sutton, G. G., Smith, H. O., Yandell, M., Evans, C. A., Holt, R. A., et al. (2001) · Science · doi:10.1126/science.1058040 · Cited by 13,909
Cited by
Inference of population splits and mixtures from genome-wide allele frequency data
Pickrell, J. K., & Pritchard, J. K. (2012) · PLoS Genetics · doi:10.1371/journal.pgen.1002967 · Cited by 2,731
Genome sequence, comparative analysis and haplotype structure of the domestic dog
members, B. S. P., Lindblad-Toh, K., Wade, C. M., Mikkelsen, T. S., Karlsson, E. K., Jaffe, D. B., Kamal, M., Clamp, M., Chang, J. L., Kulbokas, E. J., et al. (2005) · Nature · doi:10.1038/nature04338 · Cited by 2,568
Self-citationHuman-like social skills in dogs?
Hare, B., & Tomasello, M. (2005) · Trends in Cognitive Sciences · doi:10.1016/j.tics.2005.07.003 · Cited by 967
Mosher, D. S., Quignon, P., Bustamante, C. D., Sutter, N. B., Mellersh, C. S., Parker, H. G., & Ostrander, E. A. (2007) · PLoS Genetics · doi:10.1371/journal.pgen.0030079 · Cited by 826
Self-citationRethinking Dog Domestication by Integrating Genetics, Archeology, and Biogeography
Larson, G., Karlsson, E. K., Perri, A., Webster, M. T., Ho, S. Y. W., Peters, J., Stahl, P. W., Piper, P. J., Lingaas, F., Fredholm, M., et al. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1203005109 · Cited by 540
Documenting domestication: The intersection of genetics and archaeology
Zeder, M. A., Emshwiller, E., Smith, B. D., & Bradley, D. G. (2006) · Trends in Genetics · doi:10.1016/j.tig.2006.01.007 · Cited by 447
An Expressed Fgf4 Retrogene Is Associated with Breed-Defining Chondrodysplasia in Domestic Dogs
Parker, H. G., VonHoldt, B. M., Quignon, P., Margulies, E. H., Shao, S., Mosher, D. S., Spady, T. C., Elkahloun, A., Cargill, M., Jones, P. G., et al. (2009) · Science · doi:10.1126/science.1173275 · Cited by 342
Self-citationThe genomics of selection in dogs and the parallel evolution between dogs and humans
Wang, G.-D., Zhai, W., Yang, H.-C., Fan, R.-X., Cao, X., Zhong, L., Wang, L., Liu, F., Wu, H., Cheng, L.-G., et al. (2013) · Nature Communications · doi:10.1038/ncomms2814 · Cited by 323
Origins and genetic legacy of prehistoric dogs
Bergström, A., Frantz, L., Schmidt, R., Ersmark, E., Lebrasseur, O., Girdland-Flink, L., Lin, A. T., Storå, J., Sjögren, K.-G., Anthony, D., et al. (2020) · Science · doi:10.1126/science.aba9572 · Cited by 297
Central questions in the domestication of plants and animals
Zeder, M. A. (2006) · Evolutionary Anthropology Issues News and Reviews · doi:10.1002/evan.20101 · Cited by 264
Impact of Facial Conformation on Canine Health: Brachycephalic Obstructive Airway Syndrome
Packer, R. M. A., Hendricks, A., Tivers, M. S., & Burn, C. C. (2015) · PLOS ONE · doi:10.1371/journal.pone.0137496 · Cited by 238
Relaxation of selective constraint on dog mitochondrial DNA following domestication
Björnerfeldt, S., Webster, M. T., & Vilà, C. (2006) · Genome Research · doi:10.1101/gr.5117706 · Cited by 203
vonHoldt, B. M., Shuldiner, E., Koch, I. J., Kartzinel, R. Y., Hogan, A., Brubaker, L., Wanser, S., Stahler, D., Wynne, C. D. L., Ostrander, E. A., et al. (2017) · Science Advances · doi:10.1126/sciadv.1700398 · Cited by 186
Boyko, A. R., Boyko, R. H., Boyko, C. M., Parker, H. G., Castelhano, M., Corey, L., Degenhardt, J. D., Auton, A., Hedimbi, M., Kityo, R., et al. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0902129106 · Cited by 182
Self-citationHighly heritable and functionally relevant breed differences in dog behaviour
MacLean, E. L., Snyder-Mackler, N., vonHoldt, B. M., & Serpell, J. A. (2019) · Proceedings of the Royal Society B: Biological Sciences · doi:10.1098/rspb.2019.0716 · Cited by 144
Evolution of facial muscle anatomy in dogs
Kaminski, J., Waller, B. M., Diogo, R., Hartstone-Rose, A., & Burrows, A. M. (2019) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1820653116 · Cited by 138
Engelhardt, B. E., & Stephens, M. (2010) · PLoS Genetics · doi:10.1371/journal.pgen.1001117 · Cited by 128
Comparing wolves and dogs: current status and implications for human ‘self-domestication’
Range, F., & Marshall-Pescini, S. (2022) · Trends in Cognitive Sciences · doi:10.1016/j.tics.2022.01.003 · Cited by 85
“First, most studies have been conducted with pet dogs, either pure-bred or mixed-breed dogs [15,16], that live in western-style companionship with humans (i.”
BackgroundPacker, R. M. A., Hendricks, A., Volk, H. A., Shihab, N. K., & Burn, C. C. (2013) · PLoS ONE · doi:10.1371/journal.pone.0069650 · Cited by 60
Levy, J. K., Edinboro, C. H., Glotfelty, C.-S., Dingman, P. A., West, A. L., & Kirkland-Cady, K. D. (2007) · Journal of the American Veterinary Medical Association · doi:10.2460/javma.231.2.218 · Cited by 50
Evolutionary History, Selective Sweeps, and Deleterious Variation in the Dog
Freedman, A. H., Lohmueller, K. E., & Wayne, R. K. (2016) · Annual Review of Ecology, Evolution, and Systematics · doi:10.1146/annurev-ecolsys-121415-032155 · Cited by 50
Hillbertz, N. H. C. S., & Andersson, G. (2006) · Journal of Small Animal Practice · doi:10.1111/j.1748-5827.2006.00016.x · Cited by 35
Essig, G. F., Sheehan, C., Rikhi, S., Elmaraghy, C. A., & Christophel, J. J. (2019) · International Journal of Pediatric Otorhinolaryngology · doi:10.1016/j.ijporl.2018.11.028 · Cited by 34
Maglieri, V., Prato-Previde, E., Tommasi, E., & Palagi, E. (2019) · Royal Society Open Science · doi:10.1098/rsos.190946 · Cited by 26
Tail Docking and Ear Cropping Dogs: Public Awareness and Perceptions
Mills, K. E., Robbins, J., & von Keyserlingk, M. A. G. (2016) · PLOS ONE · doi:10.1371/journal.pone.0158131 · Cited by 19
Salivary proteomic profile of dogs with and without dental calculus
Bringel, M., Jorge, P. K., Francisco, P. A., Lowe, C., Sabino-Silva, R., Colombini-Ishikiriama, B. L., Machado, M. A. D. A. M., & Siqueira, W. L. (2020) · BMC Veterinary Research · doi:10.1186/s12917-020-02514-0 · Cited by 17
“In addition, the breeds studied here are similar in appearance and the genetic investigation presented a close relationship between them [34].”
BackgroundMooney, J. A., Yohannes, A., & Lohmueller, K. E. (2020) · doi:10.1101/2020.11.16.385443 · Cited by 1
Metadata
- Authors
- Parker, H. G., Kim, L. V., Sutter, N. B., Carlson, S., Lorentzen, T. D., Malek, T. B., Johnson, G. S., DeFrance, H. B., Ostrander, E. A., & Kruglyak, L.
- Venue
- Science
- Published
- 2004-05-21
- Volume
- 304
- Issue
- 5674
- Pages
- 1160-1164
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- OpenAlex
- W2140960450
- Cited by
- 735
- References
- 2
- FWCI
- 25.59
- Type
- journal article
- Language
- en
- Open access
- closed
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.