Gut Microbiomes of Malawian Twin Pairs Discordant for Kwashiorkor

Smith, Michelle I., Yatsunenko, Tanya, Manary, Mark J., Trehan, Indi, Mkakosya, Rajhab, Cheng, Jiye, Kau, Andrew L., Rich, Stephen S., Concannon, Patrick, Mychaleckyj, Josyf C., Liu, Jie, Houpt, Eric, Li, Jia V., Holmes, Elaine, Nicholson, Jeremy, Knights, Dan, Ursell, Luke K., Knight, Rob, Gordon, Jeffrey I.·2013·Science

DOI 10.1126/science.1229000

Cited by (999)

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Kleiman, Susan C., Watson, Hunna J., Bulik-Sullivan, Emily C., Huh, Eun Young, Tarantino, Lisa M., Bulik, Cynthia M., Carroll, Ian M. · 2015 · Psychosomatic Medicine
Gut microbiota dictates the metabolic response ofDrosophilato diet
Adam C-N. Wong, Adam J Dobson, Angela E. Douglas · 2014 · Journal of Experimental Biology
Structure of the gut microbiome following colonization with human feces determines colonic tumor burden
Baxter, Nielson T, Zackular, Joseph P, Chen, Grace Y, Schloss, Patrick D · 2014 · Microbiome
Effects of Diet on Resource Utilization by a Model Human Gut Microbiota Containing Bacteroides cellulosilyticus WH2, a Symbiont with an Extensive Glycobiome
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IgA Function in Relation to the Intestinal Microbiota
Andrew James Macpherson, Bahtiyar Yılmaz, Julien P. Limenitakis, Stephanie Christine Ganal-Vonarburg · 2018 · Annual Review of Immunology
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Tilg, Herbert, Moschen, Alexander R. · 2015 · Gastroenterology
Integrating gut microbiota immaturity and disease‐discriminatory taxa to diagnose the initiation and severity of shrimp disease
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An integrative view of microbiome-host interactions in inflammatory bowel diseases
Wlodarska, Marta, Kostic, Aleksandar D., Xavier, Ramnik J. · 2015 · Cell Host & Microbe
Structure and Inhibition of Microbiome β-Glucuronidases Essential to the Alleviation of Cancer Drug Toxicity
Wallace, Bret D., Roberts, Adam B., Pollet, Rebecca M., Ingle, James D., Biernat, Kristen A., Pellock, Samuel J., Venkatesh, Madhu Kumar, Guthrie, Leah, O’Neal, Sara K., Robinson, Sara J. et al. · 2015 · Chemistry & Biology
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The impact of malnutrition on childhood infections
Walson, Judd L., Berkley, James A. · 2018 · Current Opinion in Infectious Diseases
Accounting for reciprocal host–microbiome interactions in experimental science
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Environmental Enteric Dysfunction and Growth Failure/Stunting in Global Child Health
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Interplay between diet, gut microbiota, epigenetic events, and colorectal cancer
Scott J. Bultman · 2016 · Molecular Nutrition & Food Research
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Bikel, Shirley, Valdez-Lara, Alejandra, Cornejo-Granados, Fernanda, Rico, Karina, Canizales-Quinteros, Samuel, Soberón, Xavier, Del Pozo-Yauner, Luis, Ochoa-Leyva, Adrián · 2015 · Computational and Structural Biotechnology Journal
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Role of lipids in the metabolism and activation of immune cells
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Jacques Samuel Beckmann, Daniel Lew · 2016 · Genome Medicine
Gut microbiome in chronic kidney disease: challenges and opportunities
Anitha Nallu, Shailendra Sharma, Ali Ramezani, Muralidharan Jagadeesan, Dominic Raj · 2016 · Translational research
Nutrition meets the microbiome: micronutrients and the microbiota
Hans K. Biesalski · 2016 · Annals of the New York Academy of Sciences
Environmental Enteric Dysfunction: An Overview
Rosie J Crane, Kelsey D. J. Jones, James Alexander Berkley · 2015 · Food and Nutrition Bulletin
Prediction of Early Childhood Caries via Spatial-Temporal Variations of Oral Microbiota
Fei Teng, Fang Yang, Shi Wei Huang, Cunpei Bo, Zhenjiang Zech Xu, Amnon Amir, Rob D. Knight, Junqi Ling, Jian Xu · 2015 · Cell Host & Microbe
Emerging roles of the microbiome in cancer
Bultman, S. J. · 2014 · Carcinogenesis
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Thomas Perlot, Josef Martin Penninger · 2013 · Microbes and Infection
Childhood undernutrition, the gut microbiota, and microbiota-directed therapeutics
Blanton, Laura V., Barratt, Michael J., Charbonneau, Mark R., Ahmed, Tahmeed, Gordon, Jeffrey I. · 2016 · Science
Inflammation and nutritional science for programs/policies and interpretation of research evidence (INSPIRE)
Raiten, Daniel J, Ashour, Fayrouz A Sakr, Ross, A Catharine, Meydani, Simin N, Dawson, Harry D, Stephensen, Charles B, Brabin, Bernard J, Suchdev, Parminder S, van Ommen, Ben · 2015 · The Journal of Nutrition
Interactions in the microbiome: communities of organisms and communities of genes
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Fecal Microbiota, Fecal Metabolome, and Colorectal Cancer Interrelations
Rashmi R. Sinha, Jiyoung Ahn, Joshua Neil Sampson, Jianxin Shi, Guoqin Yu, Xiaoqin Xiong, Richard B. Hayes, James J. Goedert · 2016 · PLoS ONE
Gut microbiota and malnutrition
Matthieu Million, Aldiouma Diallo, Didier Raoult · 2016 · Microbial Pathogenesis
The role of environmental factors in modulating immune responses in early life
MacGillivray, Duncan M., Kollmann, Tobias R. · 2014 · Frontiers in Immunology
The human microbiome
Hubert Erich Blum · 2017 · Advances in Medical Sciences
The dynamic microbiome
Georg Kurt Gerber · 2014 · FEBS Letters
Causes of Impaired Oral Vaccine Efficacy in Developing Countries
Edward P K Parker, Sasirekha Ramani, Benjamin Alan Lopman, James A. Church, Miren Iturriza‐Gómara, Andrew J. Prendergast, Nicholas C. Grassly · 2017 · Future Microbiology
Parasite-Microbiota Interactions With the Vertebrate Gut: Synthesis Through an Ecological Lens
Jacqueline M. Leung, Andrea L. Graham, Sarah C. L. Knowles · 2018 · Frontiers in Microbiology
The intestinal microbiota: its role in health and disease
Luc Biedermann, Gerhard Rogler · 2015 · European Journal of Pediatrics
Of men in mice: the development and application of a humanized gnotobiotic mouse model for microbiome therapeutics
John Chulhoon Park, Sin‐Hyeog Im · 2020 · Experimental & Molecular Medicine
Giardia duodenalis: Biology and Pathogenesis
Rodney D. Adam · 2021 · Clinical Microbiology Reviews
Reprograming of gut microbiome energy metabolism by the FUT2 Crohn’s disease risk polymorphism
Maomeng Tong, Ian H. McHardy, Paul M. Ruegger, Maryam Goudarzi, Purna Kashyap, Talin Haritunians, Xiaoxiao Li, Thomas G. Graeber, Emma Schwager, Curtis Huttenhower et al. · 2014 · The ISME Journal
Functional metagenomic discovery of bacterial effectors in the human microbiome and isolation of commendamide, a GPCR G2A/132 agonist
Louis J. Cohen, Hahk‐Soo Kang, John Chu, Yun-Han Huang, Emma A. Gordon, Boojala Vijay B. Reddy, Melinda A. Ternei, Jeffrey W. Craig, Sean F. Brady · 2015 · Proceedings of the National Academy of Sciences
Regulators of gut motility revealed by a gnotobiotic model of diet-microbiome interactions related to travel
Dey, Neelendu, Wagner, Vitas E., Blanton, Laura V., Cheng, Jiye, Fontana, Luigi, Haque, Rashidul, Ahmed, Tahmeed, Gordon, Jeffrey I. · 2015 · Cell
RETRACTED ARTICLE: Increased Gut Redox and Depletion of Anaerobic and Methanogenic Prokaryotes in Severe Acute Malnutrition
Matthieu Million, Maryam Tidjani Alou, S. Khelaifia, Dipankar Bachar, Jean‐Christophe Lagier, Niokhor Dione, Souleymane Brah, Perrine Hugon, Vincent Lombard, Fabrice Armougom et al. · 2016 · Scientific Reports · Retracted
Muscle wasting: The gut microbiota as a new therapeutic target?
Bindels, Laure B., Delzenne, Nathalie M. · 2013 · The International Journal of Biochemistry & Cell Biology
Development of the Pediatric Gut Microbiome: Impact on Health and Disease
Faith D. Ihekweazu, James A. Versalovic · 2018 · The American Journal of the Medical Sciences
Role of SCFAs in gut microbiome and glycolysis for colorectal cancer therapy
Gang Wang, Yang Yu, Yu‐Zhu Wang, Junjie Wang, Rui Guan, Yan Sun, Feng Shi, Jing Gao, Xingli Fu · 2019 · Journal of Cellular Physiology
Impact of antimicrobial therapy on the gut microbiome
Amira A. Bhalodi, Tjitske S. R. van Engelen, Harjeet Singh Virk, Willem Joost Wiersinga · 2018 · Journal of Antimicrobial Chemotherapy
An Improved Method for High Quality Metagenomics DNA Extraction from Human and Environmental Samples
Satyabrata Bag, Bipasa Saha, Ojasvi Mehta, D. Anbumani, Naveen Kumar, Mayanka Dayal, Archana Pant, Pawan Kumar, Shruti Saxena, Kristine Højgaard Allin et al. · 2016 · Scientific Reports
Gut microbes and muscle function: can probiotics make our muscles stronger?
Muriel Giron, Muriel Thomas, Dominique P. Dardevet, Christophe Chassard, Isabelle Savary‐Auzeloux · 2022 · Journal of Cachexia Sarcopenia and Muscle
Exploring gut microbes in human health and disease: Pushing the envelope
Jun Sun, Eugene B. Chang · 2014 · Genes & Diseases
New Insights in Anorexia Nervosa
Philip A. P. M. Gorwood, Corinne Blanchet, Nicolas Chartrel, Jeanne Duclos, Pierre Déchelotte, Mouna Hanachi, Sergueı̈ O. Fetissov, Nathalie T. Godart, Jean‐Claude Melchior, Nicolás Ramoz et al. · 2016 · Frontiers in Neuroscience
Gut Microbial Succession Follows Acute Secretory Diarrhea in Humans
Lawrence A. David, Ana A. Weil, Edward Thomas Ryan, Stephen B. Calderwood, Jason B. Harris, Fahima Chowdhury, Yasmin Ara Begum, Firdausi Qadri, Regina C. LaRocque, Peter James Turnbaugh · 2015 · mBio
Weight gain by gut microbiota manipulation in productive animals
Emmanouil Angelakis · 2016 · Microbial Pathogenesis
Related actions of probiotics and antibiotics on gut microbiota and weight modification
Angelakis, Emmanouil, Merhej, Vicky, Raoult, Didier · 2013 · The Lancet Infectious Diseases
Malnutrition-associated liver steatosis and ATP depletion is caused by peroxisomal and mitochondrial dysfunction
Tim van Zutphen, Jolita Čiapaitė, Vincent W. Bloks, Cameron Ackereley, Albert Gerding, Angelika Jurdzinski, Roberta Allgayer de Moraes, Ling Zhang, Justina Clarinda Wolters, Rainer Bischoff et al. · 2016 · Journal of Hepatology
Hypothesis testing and statistical analysis of microbiome
Yinglin Xia, Jun Sun · 2017 · Genes & Diseases
Carbohydrates and the human gut microbiota
Christophe Chassard, Christophe Lacroix · 2013 · Current Opinion in Clinical Nutrition & Metabolic Care
Diet and microbiota linked in health and disease
Teresa Requena, M. Carmen Martínez‐Cuesta, Carmen Peláez · 2018 · Food & Function
Gut Microbiomes of Indian Children of Varying Nutritional Status
Tarini Shankar Ghosh, Sourav Sen Gupta, Tanudeep Bhattacharya, Deepak Yadav, Anamitra Barik, Abhijit Chowdhury, Bhabatosh Das, Sharmila S. Mande, Gopinath Balakrish Nair · 2014 · PLoS ONE
From Stool Transplants to Next-Generation Microbiota Therapeutics
Elaine O. Petrof, Alexander Khoruts · 2014 · Gastroenterology
ACE2 imbalance as a key player for the poor outcomes in COVID-19 patients with age-related comorbidities – Role of gut microbiota dysbiosis
Sofia Viana, Sara Nunes, Flávio Reis · 2020 · Ageing Research Reviews
Communities of microbial eukaryotes in the mammalian gut within the context of environmental eukaryotic diversity
Laura Wegener Parfrey, William Anton Walters, Christian L. Lauber, José C. Clemente, Donna Berg-Lyons, Clotilde Teiling, Chinnappa D. Kodira, Mohammed Mohiuddin, Julie Brunelle, Mark D. Driscoll et al. · 2014 · Frontiers in Microbiology
Engineering the gut microbiota to treat hyperammonemia
Ting‐Chin David Shen, Lindsey G. Albenberg, Kyle L. Bittinger, Christel Chehoud, Yingyu Chen, Colleen P. Judge-Golden, Lillian Chau, Josephine Ni, Michael Sheng, Andrew C. Lin et al. · 2015 · Journal of Clinical Investigation
Diet influence on the gut microbiota and dysbiosis related to nutritional disorders
Maryam Tidjani Alou, Jean‐Christophe Lagier, Didier Raoult · 2016 · Human Microbiome Journal
Annual Research Review: Critical windows – the microbiota-gut-brain axis in neurocognitive development
Cowan, Caitlin S. M., Dinan, Timothy G., Cryan, John F. · 2020 · Journal of Child Psychology and Psychiatry
Viral communities of the human gut: metagenomic analysis of composition and dynamics
Varun Aggarwala, Guanxiang Liang, Frederic D. Bushman · 2017 · Mobile DNA
Village sanitation and child health: Effects and external validity in a randomized field experiment in rural India
Jeffrey S. Hammer, Dean Spears · 2016 · Journal of Health Economics
Altered Gut Microbiota and Compositional Changes in Firmicutes and Proteobacteria in Mexican Undernourished and Obese Children
Eder Orlando Méndez-Salazar, María Guadalupe Ortiz‐López, María de los Ángeles Granados‐Silvestre, Berenice Palacios‐González, Marta Menjívar · 2018 · Frontiers in Microbiology
Pathogens, microbiome and the host: emergence of the ecological Koch's postulates
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Examining the healthy human microbiome concept
Raphaela Joos, Katy Boucher, Aonghus Lavelle, Manimozhiyan Arumugam, Martin J. Blaser, Marcus Joakim Claesson, Gerard A. Clarke, Paul D. Cotter, Luisa De Sordi, Maria Gloria Domínguez-Bello et al. · 2024 · Nature Reviews Microbiology
Adhesion Properties of Lactic Acid Bacteria on Intestinal Mucin
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Malnutrition and Gut Microbiota in Children
Ishawu Iddrisu, Andrea Monteagudo-Mera, Carlos G. Poveda, Simone Pyle, Muhammad Asif Shahzad, Simon Colin Andrews, Gemma Walton · 2021 · Nutrients
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Rinki Murphy, Alistair W. Stewart, Irene E. Braithwaite, Richard W. Beasley, Robert John Hancox, Edwin A. Mitchell, the ISAAC Phase Three Study Group · 2013 · International Journal of Obesity
The human gut microbiome and health inequities
Katherine Ryan Amato, Marie‐Claire Arrieta, Meghan B. Azad, Michael T. Bailey, Josiane L. Broussard, Carlijn E. Bruggeling, Erika C. Claud, Elizabeth K. Costello, Emily Davenport, Bas E. Dutilh et al. · 2021 · Proceedings of the National Academy of Sciences
Microbiomes: unifying animal and plant systems through the lens of community ecology theory
Natalie Christian, Briana K. Whitaker, Keith Clay · 2015 · Frontiers in Microbiology
Cultivating Healthy Growth and Nutrition through the Gut Microbiota
Sathish Subramanian, Laura V. Blanton, Steven Alex. Frese, Mark R. Charbonneau, David Andrew Mills, Jeffrey I. Gordon · 2015 · Cell
Microbes Promote Amino Acid Harvest to Rescue Undernutrition in Drosophila
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Gut microbiota trajectory in pediatric patients undergoing hematopoietic SCT
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Parasitic Protozoa and Interactions with the Host Intestinal Microbiota
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Childhood Malnutrition: Toward an Understanding of Infections, Inflammation, and Antimicrobials
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The Core Gut Microbiome of the American Cockroach, Periplaneta americana, Is Stable and Resilient to Dietary Shifts
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Antibodies Set Boundaries Limiting Microbial Metabolite Penetration and the Resultant Mammalian Host Response
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How the microbiome challenges our concept of self
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Association between Upper Digestive Tract Microbiota and Cancer-Predisposing States in the Esophagus and Stomach
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Triclosan Exposure Is Associated with Rapid Restructuring of the Microbiome in Adult Zebrafish
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