Gut Microbiomes of Malawian Twin Pairs Discordant for Kwashiorkor
Open accessAbstract
Not Just Wasting: Malnutrition is well known in Malawi, including a severe form—kwashiorkor—in which children do not simply waste away, they also suffer edema, liver damage, skin ulceration, and anorexia. Smith et al. (p. 548 ; see the Perspective by Relman ) investigated the microbiota of pairs of twins in Malawian villages and found notable differences in the composition of the gut microbiota in children with kwashiorkor. In these children, a bacterial species related to Desulfovibrio , which has been associated with bowel disease and inflammation, was noticeable. When the fecal flora from either the healthy or the sick twin was transplanted into groups of germ-free mice, the mice that received the kwashiorkor sample started to lose weight, like their human counterpart.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Giving these mice a peanut-based ready-to-use therapeutic food led to a brief rise in weight and a return of their microbiota toward normal.
“when the mice are fed a peanut-based, ‘ready-to-use’ therapeutic food, their weight transiently increases and their microbiota normalize115.”
From Diet–microbiota interactions as moderators of human metabolism (2016) · cites this paper as [115]
When germ-free mice carrying a kwashiorkor-associated microbiota ate a standard Malawian diet of tomatoes and corn, they lost weight.
“germ-free mice that have been colonized with a ‘kwashiorkor’ microbiota experience weight loss when they are fed a typical Malawian diet, which is based on tomatoes and corn.”
From Diet–microbiota interactions as moderators of human metabolism (2016) · cites this paper as [115]
The gut microbiotas of twin pairs differing in kwashiorkor status are different.
“Twins that are discordant for kwashiorkor have distinct microbiotas”
From Diet–microbiota interactions as moderators of human metabolism (2016) · cites this paper as [115]
Several diet-induced host phenotypes are sufficiently mediated by changes in the gut microbiota.
“For example, several diet-induced host phenotypes are sufficiently mediated by changes in the gut microbiota (85–88).”
From Emerging Roles for the Gut Microbiome in Autism Spectrum Disorder (2017) · cites this paper as [86]
The gut microbiota and microbiome help extract and metabolize dietary ingredients.
“The microbiota/microbiome in turn plays an important role in extracting and metabolizing dietary ingredients9-14.”
From Persistent gut microbiota immaturity in malnourished Bangladeshi children (2014) · cites this paper as [12]
Food is a major determinant of the proportional representation of organisms in the gut microbiota and of its gene content.
“Food is a major factor that shapes the proportional representation of organisms present in the gut microbial community (microbiota), and its gene content (microbiome).”
From Persistent gut microbiota immaturity in malnourished Bangladeshi children (2014) · cites this paper as [12]
Studies using germ-free mice confirmed the role of the gut microbiome in obesity, Kwashiorkor, and autism-spectrum disorder by inducing disease features in recipient animals following transfer of a patient-associated microbiome.
“Seminal studies using germ‐free mice confirmed the role of the gut microbiome in a number of diseases, including obesity,47 Kwashiorkor,48 and autism‐spectrum disorder,49 by inducing disease features in recipient animals following transfer of a patient‐associated microbiome.”
From The oral microbiome: Role of key organisms and complex networks in oral health and disease (2021) · cites this paper as [48]
Animal data suggest that the "fasting" microbiome contributes to malnourishment in the host, as a microbial transplant from individuals with Kwashiorkor induced weight loss and altered protein and carbohydrate metabolism in recipient mice.
“Importantly, animal data further suggest that this “fasting” microbiome also contributes to malnourishment in the host, as a microbial transplant from individuals with Kwashiorkor (a form of severe protein-energy malnutrition) induced weight loss and altered protein and carbohydrate metabolism in the recipient mice [77].”
Transfer of fecal samples from undernourished children to germ-free mice elicited metabolic and immune dysregulations in the mouse model similar to those observed in the human host, suggesting that manifestations of malnutrition could in part be attributed to the absence of certain beneficial microbes.
“Transfer of fecal samples from undernourished children to GF mice elicited metabolic and immune dysregulations in the mouse model similar to those observed in the human host, suggesting that the manifestations of malnutrition could in part be attributed to the absence of certain beneficial microbes (280).”
From Diet and the Microbiota–Gut–Brain Axis: Sowing the Seeds of Good Mental Health (2021) · cites this paper as [280]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Breiman, L. (2001) · Machine Learning · doi:10.1023/a:1010933404324 · Cited by 133,538 · see citing works
QIIME allows analysis of high-throughput community sequencing data
Caporaso, J. G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F. D., Costello, E. K., Fierer, N., Peña, A. G., Goodrich, J. K., Gordon, J. I., et al. (2010) · Nature Methods · doi:10.1038/nmeth.f.303 · Cited by 34,887 · see citing works
Self-citationUltra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms
Caporaso, J. G., Lauber, C. L., Walters, W. A., Berg-Lyons, D., Huntley, J., Fierer, N., Owens, S. M., Betley, J., Fraser, L., Bauer, M., et al. (2012) · The ISME Journal · doi:10.1038/ismej.2012.8 · Cited by 8,839 · see citing works
Self-citationA core gut microbiome in obese and lean twins
Turnbaugh, P. J., Hamady, M., Yatsunenko, T., Cantarel, B. L., Duncan, A., Ley, R. E., Sogin, M. L., Jones, W. J., Roe, B. A., Affourtit, J. P., et al. (2009) · Nature · doi:10.1038/nature07540 · Cited by 7,823 · see citing works
Self-citationHuman gut microbiome viewed across age and geography
Yatsunenko, T., Rey, F. E., Manary, M. J., Trehan, I., Dominguez-Bello, M. G., Contreras, M., Magris, M., Hidalgo, G., Baldassano, R. N., Anokhin, A. P., et al. (2012) · Nature · doi:10.1038/nature11053 · Cited by 7,815 · see citing works
Self-citationMaternal and child undernutrition: global and regional exposures and health consequences
Black, R. E., Allen, L. H., Bhutta, Z. A., Caulfield, L. E., de Onis, M., Ezzati, M., Mathers, C., & Rivera, J. (2008) · The Lancet · doi:10.1016/s0140-6736(07)61690-0 · Cited by 6,443 · see citing works
Sokol, H., Pigneur, B., Watterlot, L., Lakhdari, O., Bermúdez-Humarán, L. G., Gratadoux, J.-J., Blugeon, S., Bridonneau, C., Furet, J.-P., Corthier, G., et al. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0804812105 · Cited by 4,413 · see citing works
WHO Child Growth Standards based on length/height, weight and age
de Onís, M. (2006) · Acta Paediatrica · doi:10.1111/j.1651-2227.2006.tb02378.x · Cited by 3,991 · see citing works
Beckonert, O. P., Keun, H. C., Ebbels, T. M. D., Bundy, J. G., Holmes, E. C., Lindon, J. C., & Nicholson, J. K. (2007) · Nature Protocols · doi:10.1038/nprot.2007.376 · Cited by 2,112 · see citing works
Self-citationDietary-fat-induced taurocholic acid promotes pathobiont expansion and colitis in Il10-/- mice
Devkota, S., Wang, Y., Musch, M. W., Leone, V., Fehlner-Peach, H., Nadimpalli, A., Antonopoulos, D. A., Jabri, B., & Chang, E. B. (2012) · Nature · doi:10.1038/nature11225 · Cited by 1,904 · see citing works
LINEAR AND NONLINEAR MIXED-EFFECTS MODELS
Bates, D. M., & Pinheiro, J. C. (1998) · Conference on Applied Statistics in Agriculture · doi:10.4148/2475-7772.1273 · Cited by 1,068 · see citing works
Low methionine ingestion by rats extends life span.
Orentreich, N., Matias, J. R., Felice, A. D., & Zimmerman, J. (1993) · Journal of NutriLife · doi:10.1093/jn/123.2.269 · Cited by 608 · see citing works
McNulty, N. P., Yatsunenko, T., Hsiao, A., Faith, J. J., Muegge, B. D., Goodman, A. L., Henrissat, B., Oozeer, R., Cools-Portier, S., Gobert, G., et al. (2011) · Science Translational Medicine · doi:10.1126/scitranslmed.3002701 · Cited by 544 · see citing works
Self-citationFermentation of mucins and plant polysaccharides by anaerobic bacteria from the human colon
Salyers, A. A., West, S. E. H., Vercellotti, J. R., & Wilkins, T. D. (1977) · Applied and Environmental Microbiology · doi:10.1128/aem.34.5.529-533.1977 · Cited by 471 · see citing works
Probiotic properties of human lactobacilli strains to be used in the gastrointestinal tract
Fernández, M. F., Boris, S., & Barbés, C. (2003) · Journal of Applied Microbiology · doi:10.1046/j.1365-2672.2003.01850.x · Cited by 441 · see citing works
Veselkov, K., Lindon, J. C., Ebbels, T. M. D., Crockford, D. J., Volynkin, V., Holmes, E. C., Davies, D. B., & Nicholson, J. K. (2008) · Analytical Chemistry · doi:10.1021/ac8011544 · Cited by 338 · see citing works
Self-citationStatistical Tests for Detection of Misspecified Relationships by Use of Genome-Screen Data
McPeek, M. S., & Sun, L. (2000) · The American Journal of Human Genetics · doi:10.1086/302800 · Cited by 336 · see citing works
Case-Control Study of Enteropathogens Associated with Childhood Diarrhea in Dhaka, Bangladesh
Albert, M. J., Faruque, A. S. G., Faruque, S. M., Sack, R. B., & Mahalanabis, D. (1999) · Journal of Clinical Microbiology · doi:10.1128/jcm.37.11.3458-3464.1999 · Cited by 329 · see citing works
Williams, C. (1935) · The Lancet · doi:10.1016/s0140-6736(00)94666-x · Cited by 235 · see citing works
Taniuchi, M., Verweij, J. J., Noor, Z., Sobuz, S. U., van Lieshout, L., Petri, W. A., Haque, R., & Houpt, E. R. (2011) · American Journal of Tropical Medicine and Hygiene · doi:10.4269/ajtmh.2011.10-0461 · Cited by 199 · see citing works
Self-citationTaurine reduction in anaerobic respiration of Bilophila wadsworthia RZATAU
Laue, H., Denger, K., & Cook, A. M. (1997) · Applied and Environmental Microbiology · doi:10.1128/aem.63.5.2016-2021.1997 · Cited by 169 · see citing works
Proton NMR spectra of urine as indicators of renal damage. Mercury-induced nephrotoxicity in rats.
Nicholson, J. K., Timbrell, J. A., & Sadler, P. J. (1985) · Molecular Pharmacology · doi:10.1016/s0026-895x(25)12559-5 · Cited by 162 · see citing works
Self-citationMANARY, M. J. (2006) · Food and Nutrition Bulletin · doi:10.1177/15648265060273s305 · Cited by 159 · see citing works
Self-citationTaras, D., Simmering, R., Collins, M. D., Lawson, P. A., & Blaut, M. (2002) · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · doi:10.1099/00207713-52-2-423 · Cited by 143 · see citing works
The Free Amino Acids in Blood Plasma of Children with Kwashiorkor and Marasmus
ARROYAVE, G., WILSON, D., FUNES, C. D., & Béhar, M. (1962) · American Journal of Clinical Nutrition · doi:10.1093/ajcn/11.5.517 · Cited by 119 · see citing works
Ciliberto, H. M., Ciliberto, M. A., Briend, A., Ashorn, P., Bier, D. M., & MANARY, M. J. (2005) · BMJ · doi:10.1136/bmj.38427.404259.8f · Cited by 115 · see citing works
Self-citationMetabonomic Study of Aristolochic Acid-Induced Nephrotoxicity in Rats
Chen, M., Su, M., Zhao, L., Jiang, J. C., Liu, P., Cheng, J., Lai, Y., Liu, Y., & Jia, W. P. (2006) · Journal of Proteome Research · doi:10.1021/pr050404w · Cited by 111 · see citing works
Self-citationInhibition of food-borne pathogenic bacteria by bacteriocins from Lactobacillus gasseri
Takatoshi, I. T. O. H., Fujimoto, Y., Kawai, Y., Toba, T., & Saito, T. T. (1995) · Letters in Applied Microbiology · doi:10.1111/j.1472-765x.1995.tb01025.x · Cited by 108 · see citing works
Serum Amino Acids in Kwashiorkor
Whitehead, R. G., & Dean, R. F. A. (1964) · American Journal of Clinical Nutrition · doi:10.1093/ajcn/14.6.313 · Cited by 107 · see citing works
Chaparro, C. M., & Dewey, K. G. (2010) · Maternal & Child Nutrition · doi:10.1111/j.1740-8709.2009.00224.x · Cited by 100 · see citing works
Liu, J., Gratz, J. C., Maro, A., Kumburu, H., Kibiki, G. S., Taniuchi, M., Howlader, A. M., Sobuz, S. U., Haque, R., Talukder, K. A., et al. (2011) · Journal of Clinical Microbiology · doi:10.1128/jcm.05416-11 · Cited by 85 · see citing works
Self-citationTaniuchi, M., Verweij, J. J., Sethabutr, O., Bodhidatta, L., Garcia, L. S., Maro, A., Kumburu, H. H., Gratz, J. C., Kibiki, G. S., & Houpt, E. R. (2011) · Diagnostic Microbiology and Infectious Disease · doi:10.1016/j.diagmicrobio.2011.08.012 · Cited by 83 · see citing works
Self-citationPROTEIN DEFICIENCY, ENERGY DEFICIENCY, AND THE OEDEMA OF MALNUTRITION
Golden, M. H. (1982) · The Lancet · doi:10.1016/s0140-6736(82)92839-2 · Cited by 74 · see citing works
THE FREE AMINOACIDS OF PLASMA AND URINE IN KWASHIORKOR
Edozien, J. C., Phillips, E. J., & Collis, W. R. F. (1960) · The Lancet · doi:10.1016/s0140-6736(60)90502-x · Cited by 67 · see citing works
Taniuchi, M., Walters, C. C., Gratz, J. C., Maro, A., Kumburu, H. H., Serichantalergs, O., Sethabutr, O., Bodhidatta, L., Kibiki, G. S., TONEY, D. M., et al. (2012) · Diagnostic Microbiology and Infectious Disease · doi:10.1016/j.diagmicrobio.2012.03.008 · Cited by 57 · see citing works
Self-citationKwashiorkor: a nutritional disease of children associated with a maize diet. 1935.
Williams, C. D., Oxon, B. M., & Lond, H. (2003) · Europe PMC (PubMed Central) · doi:10.1590/s0042-96862003001200011 · Cited by 52 · see citing works
LaGrone, L. N., Cole, S., Schondelmeyer, A. C., Maleta, K. M., & MANARY, M. J. (2010) · Annals of Tropical Paediatrics · doi:10.1179/146532810x12703901870651 · Cited by 49 · see citing works
Self-citationUtilization of isomers and analogs of amino acids and other sulfur-containing compounds.
Baker, D. H. (1986) · PubMed · Cited by 46 · see citing works
Lin, C. A., Boslaugh, S., Ciliberto, H. M., Maleta, K. M., Ashorn, P., Briend, A., & MANARY, M. J. (2007) · Journal of Pediatric Gastroenterology and Nutrition · doi:10.1097/mpg.0b013e31802c6e57 · Cited by 44 · see citing works
Self-citationPotential defense-related prenylated isoflavones in lactofen-induced soybean
Cheng, J., Yuan, C., & Graham, T. L. (2011) · Phytochemistry · doi:10.1016/j.phytochem.2011.03.010 · Cited by 35 · see citing works
Self-citationClostridium innocuum Bacteremia in a Patient With Acquired Immunodeficiency Syndrome
Crum‐Cianflone, N. F. (2009) · The American Journal of the Medical Sciences · doi:10.1097/maj.0b013e31819f1e95 · Cited by 30 · see citing works
Ahmed, T., Rahman, S., & Cravioto, A. (2009) · PubMed · Cited by 27 · see citing works
Wensinck, F., van de Merwe, J. P., & Mayberry, J. F. (2009) · Digestion · doi:10.1159/000198931 · Cited by 24 · see citing works
Serum Amino Acids of Children on High and Low Protein Intakes
Ittyerah, T. R., Pereira, S. M., & DUMM, M. E. (1965) · American Journal of Clinical Nutrition · doi:10.1093/ajcn/17.1.11 · Cited by 24 · see citing works
Urinary excretion of sulfate in kwashiorkor
Ittyerah, T. R. (1969) · Clinica Chimica Acta · doi:10.1016/0009-8981(69)90194-6 · Cited by 20 · see citing works
Kato‐Mori, Y., Orihashi, T., Kanai, Y., Sato, M., Sera, K., & Hagiwara, K. (2010) · Journal of Medicinal Food · doi:10.1089/jmf.2010.1137 · Cited by 15 · see citing works
Mori, M., Manabe, S., Uenishi, K., & Sakamoto, S. (1993) · PubMed · Cited by 5 · see citing works
Methionine metabolism in kwashiorkor in Egyptian children.
Awwaad, S., Eisa, E., & EL-ESSAWY, M. (1962) · PubMed · Cited by 4 · see citing works
Flagged first, then by citations
Research works printed but not linked: 2
- [3]World Health Organization, United Nations Children’s Fund WHO child growth standards and the identification of severe acute malnutrition in infants and children 2009 www.who.int/nutrition/publications/severemalnutrition/9789241598163/en/index.html 24809116
- [53]Subcommittee on Laboratory Animal Nutrition, Committee on Animal Nutrition, Board on Agriculture, National Research Council Nutrient Requirements of Laboratory Animals, Fourth Revised Edition, 1995 The National Academies Press 4 1995 25121259
Cited by
Sorted by citations
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
Bolyen, E., Rideout, J. R., Dillon, M. R., Bokulich, N. A., Abnet, C. C., Al-Ghalith, G. A., Alexander, H., Alm, E. J., Arumugam, M., Asnicar, F., et al. (2019) · Nature Biotechnology · doi:10.1038/s41587-019-0209-9 · Cited by 23,742 · see citing works
Self-citationGut microbiota in human metabolic health and disease
Fan, Y., & Pedersen, O. (2021) · Nature Reviews Microbiology · doi:10.1038/s41579-020-0433-9 · Cited by 4,724 · see citing works
Proteobacteria: Microbial signature of dysbiosis in gut microbiota
Shin, N.-R., Whon, T. W., & Bae, J.-W. (2015) · Trends in Biotechnology · doi:10.1016/j.tibtech.2015.06.011 · Cited by 3,954 · see citing works
Diet–microbiota interactions as moderators of human metabolism
Sonnenburg, J. L., & Bäckhed, F. (2016) · Nature · doi:10.1038/nature18846 · Cited by 2,257 · see citing works
Artificial sweeteners induce glucose intolerance by altering the gut microbiota
Suez, J., Korem, T., Zeevi, D., Zilberman-Schapira, G., Thaiss, C. A., Maza, O., Israeli, D., Zmora, N., Gilad, S., Weinberger, A., et al. (2014) · Nature · doi:10.1038/nature13793 · Cited by 2,067 · see citing works
You are what you eat: Diet, health and the gut microbiota
Zmora, N., Suez, J., & Elinav, E. (2019) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/s41575-018-0061-2 · Cited by 1,792 · see citing works
Early infancy microbial and metabolic alterations affect risk of childhood asthma
Arrieta, M., Stiemsma, L. T., Dimitriu, P. A., Thorson, L., Russell, S., Yurist‐Doutsch, S., Kuzeljevic, B., Gold, M. J., Britton, H. M., Lefebvre, D. L., et al. (2015) · Science Translational Medicine · doi:10.1126/scitranslmed.aab2271 · Cited by 1,783 · see citing works
Schwabe, R. F., & Jobin, C. (2013) · Nature Reviews Cancer · doi:10.1038/nrc3610 · Cited by 1,689 · see citing works
The gut-liver axis and the intersection with the microbiome
Tripathi, A., Debelius, J., Brenner, D. A., Karin, M., Loomba, R., Schnabl, B., & Knight, R. (2018) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/s41575-018-0011-z · Cited by 1,480 · see citing works
Self-citationHypoalbuminemia: Pathogenesis and Clinical Significance
Soeters, P. B., Wolfe, R. R., & Shenkin, A. (2019) · Journal of Parenteral and Enteral Nutrition · doi:10.1002/jpen.1451 · Cited by 1,448 · see citing works
Signals from the gut microbiota to distant organs in physiology and disease
Schroeder, B. O., & Bäckhed, F. (2016) · Nature Medicine · doi:10.1038/nm.4185 · Cited by 1,409 · see citing works
How informative is the mouse for human gut microbiota research?
Nguyen, T. L. A., Vieira-Silva, S., Liston, A., & Raes, J. (2015) · Disease Models & Mechanisms · doi:10.1242/dmm.017400 · Cited by 1,334 · see citing works
Persistent gut microbiota immaturity in malnourished Bangladeshi children
Subramanian, S., Huq, S., Yatsunenko, T., Haque, R., Mahfuz, M., Alam, M. A., Benezra, A., DeStefano, J., Meier, M. F., Muegge, B. D., et al. (2014) · Nature · doi:10.1038/nature13421 · Cited by 1,270 · see citing works
Self-citationFernandes, A. D., Reid, J. N., Macklaim, J. M., McMurrough, T. A., Edgell, D. R., & Gloor, G. B. (2014) · Microbiome · doi:10.1186/2049-2618-2-15 · Cited by 1,329 · see citing works
Enterotypes in the landscape of gut microbial community composition
Costea, P. I., Hildebrand, F., Arumugam, M., Bäckhed, F., Blaser, M. J., Bushman, F. D., de Vos, W. M., Ehrlich, S. D., Fraser, C. M., Hattori, M., et al. (2017) · Nature Microbiology · doi:10.1038/s41564-017-0072-8 · Cited by 1,138 · see citing works
Self-citationThe microbiome in early life: Implications for health outcomes
Tamburini, S., Shen, N., Wu, H. C., & Clemente, J. C. (2016) · Nature Medicine · doi:10.1038/nm.4142 · Cited by 1,213 · see citing works
The stunting syndrome in developing countries
Prendergast, A. J., & Humphrey, J. H. (2014) · Paediatrics and International Child Health · doi:10.1179/2046905514y.0000000158 · Cited by 1,164 · see citing works
Yassour, M., Vatanen, T., Siljander, H., Hämäläinen, A.-M., Härkönen, T., Ryhänen, S. J., Franzosa, E. A., Vlamakis, H., Huttenhower, C., Gevers, D., et al. (2016) · Science Translational Medicine · doi:10.1126/scitranslmed.aad0917 · Cited by 1,043 · see citing works
The Gut Microbiota Mediates the Anti-Seizure Effects of the Ketogenic Diet
Olson, C. A., Vuong, H. E., Yano, J. M., Liang, Q. Y., Nusbaum, D. J., & Hsiao, E. Y. (2018) · Cell · doi:10.1016/j.cell.2018.04.027 · Cited by 1,057 · see citing works
The Intestinal Microbiome in Early Life: Health and Disease
Arrieta, M.-C., Stiemsma, L. T., Amenyogbe, N., Brown, E. M., & Finlay, B. (2014) · Frontiers in Immunology · doi:10.3389/fimmu.2014.00427 · Cited by 1,024 · see citing works
The double burden of malnutrition: aetiological pathways and consequences for health
Wells, J. C., Sawaya, A. L., Wibaek, R., Mwangome, M., Poullas, M. S., Yajnik, C. S., & Demaio, A. (2020) · The Lancet · doi:10.1016/s0140-6736(19)32472-9 · Cited by 993 · see citing works
Commensal bacteria at the interface of host metabolism and the immune system
Brestoff, J. R., & Artis, D. (2013) · Nature Immunology · doi:10.1038/ni.2640 · Cited by 945 · see citing works
Langdon, A. E., Crook, N., & Dantas, G. A. (2016) · Genome Medicine · doi:10.1186/s13073-016-0294-z · Cited by 917 · see citing works
Taur, Y., Jenq, R. R., Perales, M.-A., Littmann, E. R., Morjaria, S., Ling, L., No, D., Gobourne, A., Viale, A., Dahi, P. B., et al. (2014) · Blood · doi:10.1182/blood-2014-02-554725 · Cited by 885 · see citing works
Archaea and fungi of the human gut microbiome: correlations with diet and bacterial residents
Hoffmann, C., Dollive, S., Grunberg, S., Chen, J., Li, H., Wu, G. D., Lewis, J. D., & Bushman, F. D. (2013) · PLoS ONE · doi:10.1371/journal.pone.0066019 · Cited by 808 · see citing works
Microbiota-Brain-Gut Axis and Neurodegenerative Diseases
Quigley, E. M. M. (2017) · Current Neurology and Neuroscience Reports · doi:10.1007/s11910-017-0802-6 · Cited by 804 · see citing works
Towards a more comprehensive concept for prebiotics
Bindels, L. B., Delzenne, N. M., Cani, P. D., & Walter, J. (2015) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/nrgastro.2015.47 · Cited by 914 · see citing works
Microbially Produced Imidazole Propionate Impairs Insulin Signaling through mTORC1
Koh, A., Molinaro, A., Ståhlman, M., Khan, M. T., Schmidt, C., Mannerås-Holm, L., Wu, H., Carreras, A., Jeong, H., Olofsson, L. E., et al. (2018) · Cell · doi:10.1016/j.cell.2018.09.055 · Cited by 824 · see citing works
The Human Microbiome and Child Growth – First 1000 Days and Beyond
Robertson, R. C., Manges, A. R., Finlay, B. B., & Prendergast, A. J. (2019) · Trends in Microbiology · doi:10.1016/j.tim.2018.09.008 · Cited by 793 · see citing works
Tremaroli, V., Karlsson, F., Werling, M., Ståhlman, M., Kovatcheva-Datchary, P., Olbers, T., Fändriks, L., le Roux, C. W., Nielsen, J., & Bäckhed, F. (2015) · Cell Metabolism · doi:10.1016/j.cmet.2015.07.009 · Cited by 757 · see citing works
Gut bacteria that prevent growth impairments transmitted by microbiota from malnourished children
Blanton, L. V., Charbonneau, M. R., Salih, T., Barratt, M. J., Venkatesh, S., Ilkaveya, O., Subramanian, S., Manary, M. J., Trehan, I., Jorgensen, J. M., et al. (2016) · Science · doi:10.1126/science.aad3311 · Cited by 735 · see citing works
Self-citationHuman gut microbiota in health and disease: Unveiling the relationship
Afzaal, M., Saeed, F., Shah, Y. A., Hussain, M., Rabail, R., Socol, C. T., Hassoun, A., Pateiro, M., Lorenzo, J. M., Rusu, A. V., et al. (2022) · Frontiers in Microbiology · doi:10.3389/fmicb.2022.999001 · Cited by 762 · see citing works
The oral microbiome: Role of key organisms and complex networks in oral health and disease
Sedghi, L., DiMassa, V., Harrington, A., Lynch, S. V., & Kapila, Y. L. (2021) · Periodontology 2000 · doi:10.1111/prd.12393 · Cited by 755 · see citing works
Immune Dysfunction as a Cause and Consequence of Malnutrition
Bourke, C. D., Berkley, J. A., & Prendergast, A. J. (2016) · Trends in Immunology · doi:10.1016/j.it.2016.04.003 · Cited by 732 · see citing works
The Gut Microbiome Modulates Colon Tumorigenesis
Zackular, J. P., Baxter, N. T., Iverson, K. D., Sadler, W. D., Petrosino, J. F., Chen, G., & Schloss, P. D. (2013) · mBio · doi:10.1128/mbio.00692-13 · Cited by 717 · see citing works
Goodrich, J. K., Di Rienzi, S. C., Poole, A. C., Koren, O., Walters, W. A., Caporaso, J. G., Knight, R., & Ley, R. E. (2014) · Cell · doi:10.1016/j.cell.2014.06.037 · Cited by 714 · see citing works
Self-citationContextualising complementary feeding in a broader framework for stunting prevention
Stewart, C. P., Iannotti, L. L., Dewey, K. G., Michaelsen, K. F., & Onyango, A. W. (2013) · Maternal and Child Nutrition · doi:10.1111/mcn.12088 · Cited by 776 · see citing works
Relating the metatranscriptome and metagenome of the human gut
Franzosa, E. A., Morgan, X. C., Segata, N., Waldron, L., Reyes, J. A., Earl, A. M., Giannoukos, G., Boylan, M. R., Ciulla, D., Gevers, D., et al. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1319284111 · Cited by 713 · see citing works
Functional Redundancy-Induced Stability of Gut Microbiota Subjected to Disturbance
Moya, A., & Ferrer, M. (2016) · Trends in Microbiology · doi:10.1016/j.tim.2016.02.002 · Cited by 690 · see citing works
Our gut microbiome: The evolving inner self
Kundu, P., Blacher, E., Elinav, E., & Pettersson, S. (2017) · Cell · doi:10.1016/j.cell.2017.11.024 · Cited by 633 · see citing works
An introduction to the analysis of shotgun metagenomic data
Sharpton, T. J. (2014) · Frontiers in Plant Science · doi:10.3389/fpls.2014.00209 · Cited by 654 · see citing works
The Immune System in Children with Malnutrition—A Systematic Review
Rytter, M. J. H., Kolte, L., Briend, A., Friis, H., & Christensen, V. B. (2014) · PLoS ONE · doi:10.1371/journal.pone.0105017 · Cited by 651 · see citing works
Intestinal Microbial Diversity during Early-Life Colonization Shapes Long-Term IgE Levels
Cahenzli, J., Köller, Y., Wyss, M., Geuking, M. B., & McCoy, K. D. (2013) · Cell Host & Microbe · doi:10.1016/j.chom.2013.10.004 · Cited by 611 · see citing works
Microbial Changes during Pregnancy, Birth, and Infancy
Nuriel‐Ohayon, M., Neuman, H., & Koren, O. (2016) · Frontiers in Microbiology · doi:10.3389/fmicb.2016.01031 · Cited by 624 · see citing works
Advancing Our Understanding of the Human Microbiome Using QIIME
Navas-Molina, J. A., Peralta‐Sánchez, J. M., González, A., McMurdie, P. J., Vázquez‐Baeza, Y., Xu, Z. Z., Ursell, L. K., Lauber, C. L., Zhou, H., Song, S. J., et al. (2013) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/b978-0-12-407863-5.00019-8 · Cited by 603 · see citing works
Self-citationEmerging Roles for the Gut Microbiome in Autism Spectrum Disorder
Vuong, H. E., & Hsiao, E. Y. (2017) · Biological Psychiatry · doi:10.1016/j.biopsych.2016.08.024 · Cited by 595 · see citing works
Walter, J., Armet, A. M., Finlay, B. B., & Shanahan, F. (2020) · Cell · doi:10.1016/j.cell.2019.12.025 · Cited by 596 · see citing works
Lactobacillus plantarum strain maintains growth of infant mice during chronic undernutrition
Schwarzer, M., Makki, K., Storelli, G., Machuca‐Gayet, I., Šrůtková, D., Hermanová, P. P., Martino, M. E., Balmand, S., Hudcovic, T., Heddi, A., et al. (2016) · Science · doi:10.1126/science.aad8588 · Cited by 590 · see citing works
Dynamic modulation of the gut microbiota and metabolome by bacteriophages in a mouse model
Hsu, B. B., Gibson, T. E., Yeliseyev, V., Liu, Q., Lyon, L., Bry, L., Silver, P. A., & Gerber, G. K. (2019) · Cell Host & Microbe · doi:10.1016/j.chom.2019.05.001 · Cited by 573 · see citing works
Microbiome–host systems interactions: protective effects of propionate upon the blood–brain barrier
Hoyles, L., Snelling, T., Umlai, U.-K., Nicholson, J. K., Carding, S. R., Glen, R. C., & McArthur, S. (2018) · Microbiome · doi:10.1186/s40168-018-0439-y · Cited by 591 · see citing works
Self-citationBilophila wadsworthia aggravates high fat diet induced metabolic dysfunctions in mice
Natividad, J. M., Lamas, B., Pham, H., Michel, M., Rainteau, D. P., Bridonneau, C., Costa, G. D., Vlieg, J. V. H., Sovran, B., Chamignon, C., et al. (2018) · Nature Communications · doi:10.1038/s41467-018-05249-7 · Cited by 547 · see citing works
Specialized metabolites from the microbiome in health and disease
Sharon, G., Garg, N., Debelius, J., Knight, R., Dorrestein, P. C., & Mazmanian, S. K. (2014) · Cell Metabolism · doi:10.1016/j.cmet.2014.10.016 · Cited by 544 · see citing works
Self-citationEffects of Psychological, Environmental and Physical Stressors on the Gut Microbiota
Karl, J. P., Hatch‐McChesney, A., Arcidiacono, S. M., Pearce, S., Pantoja-Feliciano, I. G., Doherty, L. A., & Soares, J. W. (2018) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.02013 · Cited by 535 · see citing works
Mao, S., Zhang, M., Liu, J., & Zhu, W. (2015) · Scientific Reports · doi:10.1038/srep16116 · Cited by 532 · see citing works
Self-citationA discrete genetic locus confers xyloglucan metabolism in select human gut Bacteroidetes
Larsbrink, J., Rogers, T. E., Hemsworth, G. R., McKee, L. S., Tauzin, A. S., Oliver Spadiut, A., Klinter, S., Pudlo, N. A., Urs, K., Koropatkin, N. M., et al. (2014) · Nature · doi:10.1038/nature12907 · Cited by 527 · see citing works
Cuevas-Sierra, A., Ramos-Lopez, O., Riezu-Boj, J. I., Milagro, F. I., & Martinez, J. A. (2019) · Advances in Nutrition · doi:10.1093/advances/nmy078 · Cited by 523 · see citing works
Captivity humanizes the primate microbiome
Clayton, J. B., Vangay, P., Huang, H., Ward, T., Hillmann, B., Al‐Ghalith, G. A., Travis, D. A., Long, H. T., Tuan, B. V., Minh, V. V., et al. (2016) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1521835113 · Cited by 510 · see citing works
Self-citationRole of the gut microbiota in human nutrition and metabolism
Ramakrishna, B. (2013) · Journal of Gastroenterology and Hepatology · doi:10.1111/jgh.12294 · Cited by 505 · see citing works
Alterations in the Gut Microbiota Associated with HIV-1 Infection
Lozupone, C., Li, M., Campbell, T., Flores, S. C., Linderman, D. J., Gebert, M. J., Knight, R. D., Fontenot, A. P., & Palmer, B. E. (2013) · Cell Host & Microbe · doi:10.1016/j.chom.2013.08.006 · Cited by 489 · see citing works
Self-citationBhutta, Z. A., Berkley, J. A., Bandsma, R., Kerac, M., Trehan, I., & Briend, A. (2017) · Nature Reviews Disease Primers · doi:10.1038/nrdp.2017.67 · Cited by 496 · see citing works
Self-citationEdwards, J. A., Santos‐Medellín, C., Liechty, Z., Nguyen, B., Lurie, E., Eason, S., Phillips, G. C., & Sundaresan, V. (2018) · PLoS Biology · doi:10.1371/journal.pbio.2003862 · Cited by 488 · see citing works
Microbiota-gut-brain axis: Modulator of host metabolism and appetite
van de Wouw, M., Schellekens, H., Dinan, T. G., & Cryan, J. F. (2017) · The Journal of Nutrition · doi:10.3945/jn.116.240481 · Cited by 461 · see citing works
Temporal variability is a personalized feature of the human microbiome
Flores, G. E., Caporaso, J. G., Henley, J. B., Rideout, J. R., Domogala, D., Chase, J., Leff, J. W., Vázquez-Baeza, Y., Gonzalez, A., Knight, R., et al. (2014) · Genome Biology · doi:10.1186/s13059-014-0531-y · Cited by 446 · see citing works
Self-citationBrugiroux, S., Beutler, M., Pfann, C., Garzetti, D., Ruscheweyh, H., Ring, D., Diehl, M., Herp, S., Loetscher, Y., Hussain, S., et al. (2016) · Nature Microbiology · doi:10.1038/nmicrobiol.2016.215 · Cited by 463 · see citing works
Developmental trajectory of the healthy human gut microbiota during the first 5 years of life
Roswall, J., Olsson, L. M., Kovatcheva‐Datchary, P., Nilsson, S., Tremaroli, V., Simon, M., Kiilerich, P., Akrami, R., Kramer, M. M., Uhlén, M., et al. (2021) · Cell Host & Microbe · doi:10.1016/j.chom.2021.02.021 · Cited by 473 · see citing works
Regional Diversity of the Gastrointestinal Microbiome
Martinez, K., Leone, V., & Chang, E. B. (2019) · Cell Host & Microbe · doi:10.1016/j.chom.2019.08.011 · Cited by 468 · see citing works
Alcock, J., Maley, C. C., & Aktipis, C. A. (2014) · BioEssays · doi:10.1002/bies.201400071 · Cited by 454 · see citing works
Dietary effects on human gut microbiome diversity
Xu, Z., & Knight, R. (2015) · British Journal Of Nutrition · doi:10.1017/s0007114514004127 · Cited by 456 · see citing works
Self-citationDiet and the Microbiota–Gut–Brain Axis: Sowing the Seeds of Good Mental Health
Berding, K., Vlckova, K., Marx, W., Schellekens, H., Stanton, C., Clarke, G., Jacka, F., Dinan, T. G., & Cryan, J. F. (2021) · Advances in Nutrition · doi:10.1093/advances/nmaa181 · Cited by 451 · see citing works
Metabolic niche of a prominent sulfate-reducing human gut bacterium
Rey, F. E., Gonzalez, M. D., Cheng, J., Wu, M., Ahern, P. P., & Gordon, J. I. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1312524110 · Cited by 412 · see citing works
Self-citationQuantifying Diet-Induced Metabolic Changes of the Human Gut Microbiome
Shoaie, S., Ghaffari, P., Kovatcheva‐Datchary, P., Mardinoğlu, A., Sen, P., Pujos‐Guillot, E., de Wouters, T., Juste, C., Rizkalla, S. W., Chilloux, J., et al. (2015) · Cell Metabolism · doi:10.1016/j.cmet.2015.07.001 · Cited by 417 · see citing works
Self-citationMicrobiome and metabolic disease: revisiting the bacterial phylum Bacteroidetes
Johnson, E. L., Heaver, S. L., Walters, W. A., & Ley, R. E. (2017) · Journal of Molecular Medicine · doi:10.1007/s00109-016-1492-2 · Cited by 389 · see citing works
Diet, Microbiota and Gut-Lung Connection
Anand, S., & Mande, S. S. (2018) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.02147 · Cited by 409 · see citing works
The gut microbiota modulates host amino acid and glutathione metabolism in mice
Mardinoglu, A., Shoaie, S., Bergentall, M., Ghaffari, P., Zhang, C., Larsson, E., Bäckhed, F., & Nielsen, J. (2015) · Molecular Systems Biology · doi:10.15252/msb.20156487 · Cited by 383 · see citing works
Alterations in Enteric Virome Are Associated With Colorectal Cancer and Survival Outcomes
Nakatsu, G., Zhou, H., Wu, W. K. K., Wong, S. H., Coker, O. O., Dai, Z., Li, X., Szeto, C.-H., Sugimura, N., Lam, T. Y.-T., et al. (2018) · Gastroenterology · doi:10.1053/j.gastro.2018.04.018 · Cited by 386 · see citing works
The Microbiome and Human Biology
Knight, R., Callewaert, C., Marotz, C., Hyde, E. R., Debelius, J. W., McDonald, D., & Sogin, M. L. (2017) · Annual Review of Genomics and Human Genetics · doi:10.1146/annurev-genom-083115-022438 · Cited by 373 · see citing works
Self-citationCompartmentalized and systemic control of tissue immunity by commensals
Belkaid, Y., & Naik, S. (2013) · Nature Immunology · doi:10.1038/ni.2604 · Cited by 382 · see citing works
Variable responses of human microbiomes to dietary supplementation with resistant starch
Venkataraman, A., Sieber, J. R., Schmidt, A. W., Waldron, C., Theis, K. R., & Schmidt, T. M. (2016) · Microbiome · doi:10.1186/s40168-016-0178-x · Cited by 384 · see citing works
Grosicki, G. J., Fielding, R. A., & Lustgarten, M. S. (2018) · Calcified Tissue International · doi:10.1007/s00223-017-0345-5 · Cited by 388 · see citing works
Diet and the human gut microbiome: An international review
Wilson, A. S., Koller, K. R., Ramaboli, M. C., Nesengani, L. T., Ocvirk, S., Chen, C., Flanagan, C. A., Sapp, F. R., Merritt, Z. T., Bhatti, F., et al. (2020) · Digestive Diseases and Sciences · doi:10.1007/s10620-020-06112-w · Cited by 369 · see citing works
Faith, J. J., Ahern, P. P., Ridaura, V. K., Cheng, J., & Gordon, J. I. (2014) · Science Translational Medicine · doi:10.1126/scitranslmed.3008051 · Cited by 373 · see citing works
Self-citationKau, A. L., Planer, J. D., Liu, J., Rao, S. M., Yatsunenko, T., Trehan, I., MANARY, M. J., Liu, T., Stappenbeck, T. S., Maleta, K. M., et al. (2015) · Science Translational Medicine · doi:10.1126/scitranslmed.aaa4877 · Cited by 373 · see citing works
Self-citationIntestinal Permeability Defects: Is It Time to Treat?
Odenwald, M. A., & Turner, J. R. (2013) · Clinical Gastroenterology and Hepatology · doi:10.1016/j.cgh.2013.07.001 · Cited by 366 · see citing works
Xie, H., Guo, R., Zhong, H., Feng, Q., Lan, Z., Qin, B., Ward, K. J., Jackson, M. A., Xia, Y., Chen, X., et al. (2016) · Cell Systems · doi:10.1016/j.cels.2016.10.004 · Cited by 341 · see citing works
Self-citationImpact of Childhood Malnutrition on Host Defense and Infection
Ibrahim, M. K., Zambruni, M., Melby, C. L., & Melby, P. C. (2017) · Clinical Microbiology Reviews · doi:10.1128/cmr.00119-16 · Cited by 359 · see citing works
A Taxonomic Signature of Obesity in the Microbiome? Getting to the Guts of the Matter
Finucane, M. M., Sharpton, T. J., Laurent, T. J., & Pollard, K. S. (2014) · PLoS ONE · doi:10.1371/journal.pone.0084689 · Cited by 321 · see citing works
Minamoto, Y., Otoni, C. C., Steelman, S. M., Büyükleblebici, O., Steiner, J. M., Jergens, A. E., & Suchodolski, J. S. (2015) · Gut Microbes · doi:10.1080/19490976.2014.997612 · Cited by 339 · see citing works
Breast milk, microbiota, and intestinal immune homeostasis
Walker, W. A., & Iyengar, S. R. (2014) · Pediatric Research · doi:10.1038/pr.2014.160 · Cited by 335 · see citing works
Yu, E. W.-Y., Gao, L., Stastka, P., Cheney, M. C., Mahabamunuge, J., Soto, M. T., Ford, C. B., Bryant, J. A., Henn, M. R., & Hohmann, E. L. (2020) · PLoS Medicine · doi:10.1371/journal.pmed.1003051 · Cited by 336 · see citing works
Gut DNA viromes of Malawian twins discordant for severe acute malnutrition
Reyes, A., Blanton, L. V., Cao, S., Zhao, G., MANARY, M. J., Trehan, I., Smith, M. I., Wang, D., Virgin, H. W., Rohwer, F. L., et al. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1514285112 · Cited by 321 · see citing works
Self-citationSalmonella Pathogenicity and Host Adaptation in Chicken-Associated Serovars
Foley, S. L., Johnson, T. J., Ricke, S. C., Nayak, R., & Danzeisen, J. (2013) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00015-13 · Cited by 330 · see citing works
Finding the Missing Links among Metabolites, Microbes, and the Host
Dorrestein, P. C., Mazmanian, S. K., & Knight, R. (2014) · Immunity · doi:10.1016/j.immuni.2014.05.015 · Cited by 317 · see citing works
Self-citationUnderstanding the impact of antibiotic perturbation on the human microbiome
Schwartz, D. J., Langdon, A. E., & Dantas, G. A. (2020) · Genome Medicine · doi:10.1186/s13073-020-00782-x · Cited by 329 · see citing works
The Role of the Immune System in Metabolic Health and Disease
Zmora, N., Bashiardes, S., Levy, M., & Elinav, E. (2017) · Cell Metabolism · doi:10.1016/j.cmet.2017.02.006 · Cited by 323 · see citing works
Kang, S. S., Jeraldo, P., Kurti, A., Miller, M. E. B., Cook, M. D., Whitlock, K. G., Goldenfeld, N. D., Woods, J. A., White, B. A., Chia, N., et al. (2014) · Molecular Neurodegeneration · doi:10.1186/1750-1326-9-36 · Cited by 322 · see citing works
Fecal microbiota transplantation in metabolic syndrome: History, present and future
de Groot, P. F., Frissen, M. N., de Clercq, N. C., & Nieuwdorp, M. (2017) · Gut Microbes · doi:10.1080/19490976.2017.1293224 · Cited by 322 · see citing works
Microbiome therapeutics — Advances and challenges
Mimee, M., Citorik, R. J., & Lu, T. K. (2016) · Advanced Drug Delivery Reviews · doi:10.1016/j.addr.2016.04.032 · Cited by 317 · see citing works
Mack, I., Cuntz, U., Grämer, C., Niedermaier, S., Pohl, C., Schwiertz, A., Zimmermann, K., Zipfel, S., Enck, P., & Penders, J. (2016) · Scientific Reports · doi:10.1038/srep26752 · Cited by 313 · see citing works
Commensal bacteria and essential amino acids control food choice behavior and reproduction
Leitão-Gonçalves, R., Carvalho-Santos, Z., Francisco, A. P., Fioreze, G. T., Anjos, M., Baltazar, C., Elias, A. P., Itskov, P. M., Piper, M. D. W., & Ribeiro, C. (2017) · PLOS Biology · doi:10.1371/journal.pbio.2000862 · Cited by 315 · see citing works
Biology and Taxonomy of crAss-like Bacteriophages, the Most Abundant Virus in the Human Gut
Guerin, E., Shkoporov, A. N., Stockdale, S. R., Clooney, A. G., Ryan, F. J., Sutton, T., Draper, L. A., González-Tortuero, E., Ross, R. P., & Hill, C. (2018) · Cell Host & Microbe · doi:10.1016/j.chom.2018.10.002 · Cited by 297 · see citing works
- Authors
- Smith, M. I., Yatsunenko, T., Manary, M. J., Trehan, I., Mkakosya, R., Cheng, J., Kau, A. L., Rich, S. S., Concannon, P., Mychaleckyj, J. C., Liu, J., Houpt, E., Li, J. V., Holmes, E., Nicholson, J., Knights, D., Ursell, L. K., Knight, R., & Gordon, J. I.
- Affiliations
- Washington University in St. Louis (US)
- University of Malawi (MW)
- University of Virginia (US)
- Imperial College London (GB)
- University of Colorado Boulder (US)
- Howard Hughes Medical Institute (US)
- Corresponding author
- Smith, Michelle I.
- Yatsunenko, Tanya
- Gordon, Jeffrey I.
- ORCID
- Venue
- Science
- Published
- 2013-02
- Volume
- 339
- Issue
- 6119
- Pages
- 548-554
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- PMC
- PMC3667500
- OpenAlex
- W2097478615
- Cited by
- 1,173
- References
- 48
- Citations by year
- 2026: 40 · 2025: 49 · 2024: 67 · 2023: 73 · 2022: 66 · 2021: 71 · 2020: 101 · 2019: 82 · 2018: 101 · 2017: 92 · 2016: 126 · 2015: 105 · 2014: 119 · 2013: 77 · 2012: 2
- FWCI
- 63.95
- Type
- journal article
- Language
- en
- Open access
- green
- europepmc.org
- Locations
- Science (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- Spiral (Imperial College London) (submittedVersion)
- Funders
- National Institute of General Medical Sciences (T32GM008759, T32GM142607)
- National Institute of Diabetes and Digestive and Kidney Diseases (R37DK030292, DK-30292, DK078669, P01DK078669, T35DK074375, R01DK030292)
- Eunice Kennedy Shriver National Institute of Child Health and Human Development (T32HD049338)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Health Sciences › Nursing › Nutrition and Dietetics › Child Nutrition and Water Access
- Health Sciences › Nursing › Nutrition and Dietetics › Infant Nutrition and Health
- Keywords
- kwashiorkor, gut microbiota, acute malnutrition, discordant twins, ready-to-use therapeutic food, microbial transplantation, gnotobiotic mice, infant nutrition, Malawi, microbial metabolic functions, weight loss
- MeSH terms
- Amino Acids, Animals, Child, Preschool, Diseases in Twins, Feces, Female, Germ-Free Life, Humans, Infant, Kwashiorkor, Longitudinal Studies, Malawi, Male, Mice, Inbred C57BL, Arachis, Gastrointestinal Tract, Carbohydrate Metabolism, Mice, Metagenome
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review