Immunomodulation in Administration of RAAV: Preclinical and Clinical Adjuvant Pharmacotherapies
Open accessAbstract
Recombinant adeno-associated virus (rAAV) has attracted a significant research focus for delivering genetic therapies to target cells. This non-enveloped virus has been trialed in many clinical-stage therapeutic strategies but important obstacle in clinical translation is the activation of both innate and adaptive immune response to the protein capsid, vector genome and transgene product. In addition, the normal population has pre-existing neutralizing antibodies against wild-type AAV, and cross-reactivity is observed between different rAAV serotypes. While extent of response can be influenced by dosing, administration route and target organ(s), these pose concerns over reduction or complete loss of efficacy, options for re-administration, and other unwanted immunological sequalae such as local tissue damage. To reduce said immunological risks, patients are excluded if they harbor anti-AAV antibodies or have received gene therapy previously. Studies have incorporated immunomodulating or suppressive regimens to block cellular and humoral immune responses such as systemic corticosteroids pre- and post-administration of Luxturna® and Zolgensma®, the two rAAV products with licensed regulatory approval in Europe and the United States. In this review, we will introduce the current pharmacological strategies to immunosuppress or immunomodulate the host immune response to rAAV gene therapy.
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Written from the paper’s full text.
TL;DR
This review summarizes licensed and repurposed pharmacotherapies used to immunomodulate host responses to rAAV gene therapy, including corticosteroids, rapamycin, mycophenolate mofetil, calcineurin inhibitors, rituximab, imlifidase, proteasome inhibitors, chemotherapeutics, oxidative-stress agents, and antimalarials. It argues that drug choice, timing, duration, and combination are critical for enabling durable transgene expression and possible re-administration.
Key findings
- Host immunity to rAAV capsid, genome, and transgene limits efficacy; pre-existing neutralizing antibodies can block transduction even at 1:5, and AAV2 seroprevalence is reported at 60%, leading many trials to exclude seropositive patients.
- In an rAAV2 hemophilia B trial, factor IX activity was initially >10% for 4 weeks but declined to <1% with self-limiting transaminitis and capsid-specific CTL changes; in a subsequent AAV8 study, steroids maintained factor IX levels albeit with a 50–70% decline from peak.
- Preclinical/clinical adjuvant strategies include rapamycin with prednisolone reducing pre-existing anti-capsid IgG by up to 93% after 8 weeks in mice; SVP[Rapa] enabling AAV8 re-dosing at 4×10^12 vg/kg in mice and NHP; rituximab producing at least a half-log anti-AAV2 NAb reduction in 9/28 rheumatoid arthritis patients; bortezomib enhancing transgene expression >50% for one year versus ~10% in hemophilia A mice; hydroxychloroquine improving photoreceptor transgene expression 5.9-fold; arsenic trioxide increasing luciferase 3.9-fold; and teniposide producing 2-log higher bioluminescence at 48 hours.
- Combination regimens show mixed results: adding daclizumab to MMF/rapamycin decreased Treg and caused anti-hFIX antibodies; delayed rATG prevented anti-transgene humoral response; and a 5-drug regimen reduced T-cell response but did not prevent NAb emergence after regimen removal.
Methods
- Narrative review of current pharmacological strategies to immunosuppress or immunomodulate the host immune response to rAAV gene therapy.
- Sources are published preclinical and clinical studies and licensed agents; Table 1 lists drug indications, adverse effects, example AAV serotypes, and study type, excluding MnTBAP and teniposide because they are not or no longer licensed in Europe and the US.
- No systematic search, meta-analysis, or primary data collection is described.
Limitations
- Stated: lack of fully predictive animal models; exact mechanisms of high-dose hepatotoxicity remain to be elucidated; hydroxychloroquine’s endosomal pH effect may not replicate with systemic application; IdeS re-administration success in one NHP was not replicated in a larger cohort; further studies are required for proteasome inhibitor effectiveness across cell types and serotypes and for teniposide durability.
- Evident: as a narrative review, it does not systematically assess study quality or risk of bias, and many cited findings are preclinical or from small samples.
- Evident: Table 1 excludes MnTBAP and teniposide because they are not or no longer licensed in Europe and the US, so coverage is restricted to licensed agents.
Model-written summary. Check it against the paper before relying on it.
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Cites
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Claims the paper makes
0 of 114 cited sources checked · 0 supported · 0 flagged
- Premisecitation
Pre-existing neutralizing antibody (NAb) can effectively block rAAV transduction even at low levels (1:5).
“Pre-existing neutralizing antibody (NAb) can effectively block rAAV transduction even at low levels (1:5) (6).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [6] Jiang, 2006, Effects of transient immunosuppression on adenoassociated,virus-mediated, liver-directed gene transfer in rhesus macaques and implications for human genetherapy, Blood source
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- Premisenone given
The extent of immune response to rAAV can be influenced by dosing, administration route, and target organ(s).
“While extent of response can be influenced by dosing, administration route and target organ(s), these pose concerns over reduction or complete loss of efficacy, options for re-administration, and other unwanted immunological sequalae such as local tissue damage.”
Quote in the paperSubstantial claim - Premisecitation
Initial exposure to AAV induces humoral and cellular anti-capsid responses that are reactive to rAAV due to capsid similarity.
“Although AAV infection is non-pathogenic in humans, initial exposure induces humoral and cellular anti-capsid response that are reactive to rAAV due to capsid similarity (4, 5).”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [4] Boutin, 2010, Prevalence of serum IgG and neutralizing factors against adeno-associated virus (AAV) types 1, 2, 5, 6, 8, and 9 in the healthy population: Implications for gene therapy using AAV vectors, Hum Gene Ther source
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- cites [5] Mingozzi, 2007, CD8+ T-cell responses to adeno-associated virus capsid in humans, Nat Med source
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- Premisenone given
Cross-reactivity is observed between different rAAV serotypes.
“In addition, the normal population has pre-existing neutralizing antibodies against wild-type AAV, and cross-reactivity is observed between different rAAV serotypes.”
Quote in the paperNot a substantial claim - Premisecitation
Most rAAV clinical trials exclude seropositive patients.
“Most rAAV clinical trials exclude seropositive patients; given the high seroprevalence (60% for AAV2), limiting patients suitable for rAAV therapy (7, 8).”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [7] Calcedo, 2009, Worldwide Epidemiology of Neutralizing Antibodies to Adeno-Associated Viruses, J Infect Dis source
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- cites [8] Li, 2012, Neutralizing antibodies against adeno-associated virus examinedprospectively in pediatric patients with hemophilia, Gene Ther source
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- Premisecitation
After rAAV administration, capsid-derived epitopes can be presented by professional antigen presenting cells (APC) via major histocompatibility complex (MHC) class I pathway and activate CTL.
“After rAAV administration, capsid-derived epitopes can be presented by professional antigen presenting cells (APC) via major histocompatibility complex (MHC) class I pathway and activate CTL (11).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [11] Sack, 2014, Development of gene transfer for induction of antigen-specific tolerance, Mol Ther - Methods Clin Dev source
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- Premisecitation
A significant obstacle in clinical delivery of rAAV is host immune response triggered by rAAV capsid, genome, and therapeutic protein produced.
“A significant obstacle in clinical delivery of rAAV is host immune response triggered by rAAV capsid, genome, and therapeutic protein produced (3).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [3] Ronzitti, 2020, Human Immune Responses to Adeno-Associated Virus (AAV) Vectors, Front Immunol source
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- Premisecitation
Ex vivo studies have shown predominantly pre-existing memory phenotype cytotoxic T lymphocytes (CTL), following exposure to rAAV can undergo expansion and potentially lead to elimination of transduced cells.
“Furthermore ex vivo studies have shown predominantly pre-existing memory phenotype cytotoxic T lymphocytes (CTL), following exposure to rAAV can undergo expansion and potentially lead to elimination of transduced cells (9, 10).”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [9] Hui, 2015, AAV capsid CD8+ T-cell epitopes are highly conserved across AAV serotypes, Mol Ther - Methods Clin Dev source
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- cites [10] Vandamme, 2017, Unraveling the Complex Story of Immune Responses to AAV Vectors Trial After Trial, Hum Gene Ther source
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- Premisenone given
The normal population has pre-existing neutralizing antibodies against wild-type AAV.
“In addition, the normal population has pre-existing neutralizing antibodies against wild-type AAV, and cross-reactivity is observed between different rAAV serotypes.”
Quote in the paperNot a substantial claim - Premisenone given
Studies have incorporated immunomodulating or suppressive regimens to block cellular and humoral immune responses, such as systemic corticosteroids pre- and post-administration of Luxturna and Zolgensma.
“Studies have incorporated immunomodulating or suppressive regimens to block cellular and humoral immune responses such as systemic corticosteroids pre- and post-administration of Luxturna® and Zolgensma®, the two rAAV products with licensed regulatory approval in Europe and the United States.”
Quote in the paperSubstantial claim - Premisecitation
Transgene protein product-specific CTL was observed in human rAAV trials for Duchenne's Muscular Dystrophy and α-1-antitrypsin.
“Moreover, transgene protein product-specific CTL was observed in human rAAV trials for Duchenne’s Muscular Dystrophy (14) and α-1-antitrypsin (15).”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [14] Mendell, 2010, Dystrophin Immunity in Duchenne’s MuscularDystrophy, N Engl J Med source
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- cites [15] Calcedo, 2017, Class I-restricted T-cell responses to a polymorphic peptide in a gene therapy clinical trial for α-1-antitrypsin deficiency, Proc Natl Acad Sci USA source
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- Premisecitation
In the initial Glybera regimen, 9/14 subjects showed humoral and cellular response against rAAV1.
“In the initial regimen, 9/14 subjects showed humoral and cellular response against rAAV1 (77).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [77] Gaudet, 2013, Efficacy and long-term safety of alipogene tiparvovec (AAV1-LPLS447X) gene therapy for lipoprotein lipase deficiency: An open-label trial, Gene Ther source
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- Interpretationcitation
High dose systemic rAAV poses concerns over dosage related hepatotoxicity.
“High dose intravenous AAV9 (2×1014 vector genomes (vg)/kg) in NHP resulted in marked transaminitis and acute liver failure (66), posing concerns over dosage related hepatotoxicity (67).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [67] 2020, High-dose AAV gene therapy deaths, Nat Biotechnol source
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- Premisecitation
No difference in AAV8-hFIX transgene expression was observed when administered with tacrolimus in NHP.
“No difference in AAV8-hFIX transgene expression was observed when administered with tacrolimus in NHP (6), highlighting the difficulties of recapitulating human immune system in mouse models.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [6] Jiang, 2006, Effects of transient immunosuppression on adenoassociated,virus-mediated, liver-directed gene transfer in rhesus macaques and implications for human genetherapy, Blood source
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- Premisecitation
CCS are used short-term in conjunction with systemically delivered gene therapies to negate transaminitis and associated CTL-induced injury transgene loss.
“CCS are used short-term in conjunction with systemically delivered gene therapies to negate transaminitis and associated CTL-induced injury transgene loss (30, 65), and reduce T-cell infiltrates in muscular fibers in non-human primates (NHP) (33).”
Quote in the paperSubstantial claim0 of 2 sources checked - Premisecitation
CCS reduce T-cell infiltrates in muscular fibers in non-human primates (NHP).
“CCS are used short-term in conjunction with systemically delivered gene therapies to negate transaminitis and associated CTL-induced injury transgene loss (30, 65), and reduce T-cell infiltrates in muscular fibers in non-human primates (NHP) (33).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [33] Cramer, 2017, Induction of T-Cell Infiltration and Programmed Death Ligand 2Expression by Adeno-Associated Virus in Rhesus Macaque Skeletal Muscle and Modulation byPrednisone, Hum Gene Ther source
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- Premisecitation
Preclinical delivery of ciclosporin and non-depleting CD4 receptor antibody (NDCD4) have been shown to induce antigen-specific Treg, enabling AAV intravenous re-administration after 3 months.
“However, preclinical delivery of ciclosporin and non-depleting CD4 receptor antibody (NDCD4) have been shown to induce antigen-specific Treg, enabling AAV intravenous re-administration after 3 months (48).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [48] McIntosh, 2012, Successful attenuation of humoral immunity to viral capsid and transgenic protein following AAV-mediated gene transfer with a non-depleting CD4 antibody and cyclosporine, Gene Ther source
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- Premisecitation
Corticosteroids (CCS; methylprednisolone, prednisolone and prodrug prednisone) bind to glucocorticoid receptors modifying diverse downstream transcriptional signaling, including annex I, MAPK phosphatase 1, and NF-κB, resulting in anti-inflammatory and immunosuppressive properties.
“Corticosteroids (CCS; methylprednisolone, prednisolone and prodrug prednisone) bind to glucocorticoid receptors modifying diverse downstream transcriptional signaling. This includes annex I, MAPK phosphatase 1, and NF-κB resulting in anti-inflammatory and immunosuppressive properties (63).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [63] Rhen, 2005, Antiinflammatory Action of Glucocorticoids — New Mechanismsfor Old Drugs, N Engl J Med source
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- Premisecitation
Daily systemic administration of tacrolimus (0.06mg/kg/day) has been shown to prolong rAAV8 and rAAV9 expression in NHP skeletal muscle, up to 42 weeks from 8 and 16 weeks respectively.
“Daily systemic administration of tacrolimus (0.06mg/kg/day) has been shown to prolong rAAV8 and rAAV9 expression in NHP skeletal muscle, up to 42 weeks from 8 and 16 weeks respectively (47).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [47] Ishii, 2020, rAAV8 and rAAV9-Mediated Long-Term Muscle Transduction with Tacrolimus (FK506) in Non-Human Primates, Mol Ther - Methods Clin Dev source
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- Premisecitation
In a murine hemophilia A model, rapamycin (4mg/kg three times a week) given in addition to B-cell depleting anti-CD20 antibodies suppressed TH and Treg response suppressing inhibitor development.
“In a murine hemophilia A model, rapamycin (4mg/kg three times a week) was given in addition to B-cell depleting anti-CD20 antibodies to suppress TH and Treg response suppressing inhibitor development (37).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [37] Biswas, 2020, B Cell Depletion Eliminates FVIII Memory B Cells and EnhancesAAV8-coF8 Immune Tolerance Induction When Combined With Rapamycin, Front Immunol source
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- Premisecitation
CCS have broad inhibitory effects on both innate and adaptive immune cells by reducing pro-inflammatory cytokine and chemokines, T- and to a lesser extent, B-cells production.
“They have broad inhibitory effects on both innate and adaptive immune cells by reducing pro-inflammatory cytokine and chemokines, T- and to a lesser extent, B-cells production (64).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [64] Coutinho, 2011, The anti-inflammatory and immunosuppressive effects ofglucocorticoids, recent developments and mechanistic insights, Mol Cell Endocrinol source
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- Premisecitation
High dose intravenous AAV9 (2×10^14 vector genomes (vg)/kg) in NHP resulted in marked transaminitis and acute liver failure.
“High dose intravenous AAV9 (2×1014 vector genomes (vg)/kg) in NHP resulted in marked transaminitis and acute liver failure (66), posing concerns over dosage related hepatotoxicity (67).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [66] Hinderer, 2018, Severe Toxicity in Nonhuman Primates and Piglets Following High-Dose Intravenous Administration of an Adeno-Associated Virus Vector Expressing Human SMN, Hum Gene Ther source
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- Premisecitation
The decline in FIX levels in the rAAV2 hemophilia B trial was associated with asymptomatic, self-limiting transaminitis, and corresponding changes in capsid-specific CTL population.
“This was associated with asymptomatic, self-limiting transaminitis, and corresponding changes in capsid-specific CTL population (5).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [5] Mingozzi, 2007, CD8+ T-cell responses to adeno-associated virus capsid in humans, Nat Med source
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- Premisecitation
The first approved gene therapy in Europe, alipogene tiparvovec (Glybera), incorporated a 12-week immunosuppression regimen with ciclosporin (3mg/kg/day) and MMF (2g/day).
“The first approved gene therapy in Europe, alipogene tiparvovec (Glybera), incorporated 12-week immunosuppression regimen with ciclosporin (3mg/kg/day) and MMF (2g/day) (32).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [32] Gaudet, 2016, Long-term retrospective analysis of gene therapy with Alipogene Tiparvovec and its effect on lipoprotein lipase deficiency-induced pancreatitis, Hum Gene Ther source
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- Premisecitation
In a clinical phase II trial for X-linked myotubular myopathy, intravenous rAAV8.AT132 at 3×10^14 vg/kg in the high dosage group, with 16 weeks of prednisolone commencing 1 day prior to dosing, three patients with pre-existing intrahepatic cholestasis experienced severe hepatobiliary complications culminating in death.
“Furthermore, clinical phase II trial for X-linked myotubular myopathy delivered intravenous rAAV8.AT132 (NCT03199469) 3×1014vg/kg in high dosage group, with 16-weeks of prednisolone commencing 1 day prior to dosing. Three patients with pre-existing intrahepatic cholestasis (68) experienced severe hepatobiliary complications culminating in death.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [68] Shieh, 2020, Re: “Moving forward after Two Deaths in a Gene Therapy Trialof Myotubular Myopathy” by Wilson and Flotte, Hum Gene Ther source
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- Premisecitation
Subsequent study (AMT-011-02) modified the regimen to commence ciclosporin and MMF from day -3 with additional methylprednisolone on day 0 resulting in transient cellular responses without clinical sequalae.
“Subsequent study (AMT-011-02) modified the regimen to commence ciclosporin and MMF from day -3 with additional methylprednisolone on day 0 resulting in transient cellular responses without clinical sequalae (78).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [78] Ferreira, 2014, Immune Responses to AAV-Vectors, the Glybera Example from Bench to Bedside, Front Immunol source
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- Premisecitation
Ciclosporin and tacrolimus inhibit calcineurin by binding to their respective immunophilins - cyclophilin and FKBP12.
“Ciclosporin and tacrolimus are immunosuppressants that inhibit calcineurin, a key signaling phosphatase, by binding to their respective immunophilins - cyclophilin and FKBP12 (76).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [76] Azzi, 2013, Calcineurin Inhibitors: 40 Years Later, Can’t LiveWithout, J Immunol source
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- Premisecitation
Intraperitoneal prednisolone with rapamycin inhibited B-cell activation in murine spleen and bone marrow, reducing pre-existing anti-capsid immunoglobulin G (IgG) by up to 93% after 8 weeks.
“Intraperitoneal prednisolone with rapamycin was shown to inhibit B-cell activation in murine spleen and bone marrow, reducing pre-existing anti-capsid immunoglobulin G (IgG) by up to 93% after 8 weeks (72).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [72] Velazquez, 2017, Effective Depletion of Pre-existing Anti-AAV Antibodies Requires Broad Immune Targeting, Mol Ther - Methods Clin Dev source
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- Premisecitation
Preliminary results of intramuscular rAAV9 re-administration for Pompe disease (NCT02240407) were successful in preventing formation of anti-capsid and anti-transgene antibodies.
“Preliminary results were successful in preventing formation of anti-capsid and anti-transgene antibodies (38), with aims to enable rAAV re-administration and maintain effectiveness in different underlying mutations.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [38] Byrne, 2019, Pompe disease gene therapy: neural manifestations require consideration of CNS directed therapy, Ann Transl Med source
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- Premisecitation
Activation of CTL can result in targeted destruction of transduced cells, as observed in rAAV2 hemophilia B clinical trial.
“The activation of CTL can result in targeted destruction of transduced cells, as observed in rAAV2 hemophilia B clinical trial (12).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [12] Manno, 2006, Successful transduction of liver in hemophilia by AAV-Factor IX and limitations imposed by the host immune response, Nat Med source
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- Premisecitation
Co-administering AAV vectors with rapamycin encapsulated in synthetic vaccine particles (SVP[Rapa]) enabled re-dosing of AAV8 at 4 × 10^12 vg/kg in mice and NHP.
“Additionally, co-administrating AAV vectors with rapamycin encapsulated in synthetic vaccine particles (SVP[Rapa]) enabled re-dosing of AAV8 at 4 × 1012vg/kg in mice and NHP (39).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [39] Meliani, 2018, Antigen-selective modulation of AAV immunogenicity with tolerogenicrapamycin nanoparticles enables successful vector re-administration, Nat Commun source
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- Premisecitation
Regulatory T cells (Treg) modulate immune tolerance towards transgene product and capsid that are vital to durable expression of therapeutic protein.
“Regulatory T cells (Treg) modulate immune tolerance towards transgene product and capsid that are vital to durable expression of therapeutic protein (16, 17).”
Quote in the paperSubstantial claim0 of 2 sources checked - Premisecitation
In the second patient of the AAVrh10-microRNA study, the addition of rituximab and rapamycin to the regimen resulted in a lower increase of NAb and T-cell response.
“In the second patient, the addition of rituximab and rapamycin to the regimen resulted in a lower increase of NAb and T-cell response (29) and these drugs are further discussed.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [29] Mueller, 2020, SOD1 suppression with adeno-associated virus and MicroRNA in familial ALS, N Engl J Med source
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- Interpretationcitation
Short-course CCS alone is likely insufficient to inhibit formation of capsid-reactive T cells and rAAV-mediated immune response with systemic high dosages.
“These studies however build evidence that short-course CCS alone is likely to be insufficient to inhibit formation of capsid-reactive T cells (13) and rAAV-mediated immune response with systemic high dosages.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [13] Nathwani, 2014, Long-Term Safety and Efficacy of Factor IX Gene Therapy in Hemophilia B, N Engl J Med source
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- Premisecitation
In a subsequent study using AAV8, administration of steroids was able to negate this response and maintain therapeutic FIX levels albeit a 50-70% decline from peak levels.
“In the subsequent study using AAV8, administration of steroids was able to negate this response and maintain therapeutic FIX levels albeit a 50-70% decline from peak levels (13).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [13] Nathwani, 2014, Long-Term Safety and Efficacy of Factor IX Gene Therapy in Hemophilia B, N Engl J Med source
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- Premisecitation
In an AAVrh10-microRNA study delivering 4.2×10^14 vg intrathecally into two adult patients, the first developed meningoradiculitis after intrathecal infusion despite corticosteroids.
“In a AAVrh10-microRNA study delivering 4.2×1014 vg intrathecally into two adult patients, the first developed meningoradiculitis after intrathecal infusion despite corticosteroids (IV methylprednisolone on day 0 and oral prednisone tapered over 4 weeks).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [29] Mueller, 2020, SOD1 suppression with adeno-associated virus and MicroRNA in familial ALS, N Engl J Med source
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- Premisecitation
A major downstream effect of calcineurin inhibitors is suppression of interleukin (IL)-2 transcription, thereby inhibiting T cells differentiation, survival, and subsequent antibody production and CTL activities via effector TH cells.
“A major downstream effect is suppression of interleukin (IL)-2 transcription, thereby inhibiting T cells differentiation, survival, and subsequent antibody production and CTL activities via effector TH cells.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [76] Azzi, 2013, Calcineurin Inhibitors: 40 Years Later, Can’t LiveWithout, J Immunol source
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- Premisecitation
A study injected hydroxychloroquine subretinally (18.75μM) with rAAV2, resulting in 5.9-fold improvement in photoreceptor transgene expression.
“A study injected hydroxychloroquine subretinally (18.75μM) with rAAV2, resulting in 5.9-fold improvement in photoreceptor transgene expression (61).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [61] Chandler, 2019, Enhancement of Adeno-Associated Virus-Mediated Gene Therapy UsingHydroxychloroquine in Murine and Human Tissues, Mol Ther - Methods Clin Dev source
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- Premisecitation
In a small group of patients with rheumatoid arthritis treated with combination of methotrexate and RTX, anti-AAV2 and anti-AAV5 NAb were lowered in a subset of patients with variable magnitudes.
“A small group of patients with rheumatoid arthritis were treated with combination of methotrexate and RTX, lowering anti-AAV2 and anti-AAV5 NAb in a subset of patients with variable magnitudes (50).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [50] Mingozzi, 2013, Prevalence and pharmacological modulation of humoral immunity to AAV vectors in gene transfer to synovial tissue, Gene Ther source
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- Premisecitation
The difference in bioluminescence reduced to ~1 log at 8 days post-administration (study endpoint).
“This difference reduced to ~1 log at 8 days post-administration (study endpoint).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [94] Nicolson, 2016, Identification and Validation of Small Molecules That Enhance Recombinant Adeno-associated Virus Transduction following High-Throughput Screens, J Virol source
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- Premisecitation
Second strand synthesis after capsid uncoating in nucleus is long-recognized as the rate-limiting step of rAAV transduction.
“Second strand synthesis after capsid uncoating in nucleus is long-recognized as the rate-limiting step of rAAV transduction (89); an improvement in such efficacy could allow rAAV administration at lower dose.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [89] Ferrari, 1996, Second-strand synthesis is a rate-limiting step for efficient transduction by recombinant adeno-associated virus vectors, J Virol source
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- Premisecitation
PIs may have immunomodulatory role in suppressing dendritic cells function and downstream T-cell stimulation.
“In addition, these inhibitors may have immunomodulatory role in suppressing dendritic cells function and downstream T-cell stimulation (86).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [86] Naujokat, 2007, Proteasomal chymotrypsin-like peptidase activity is required foressential functions of human monocyte-derived dendritic cells, Immunology source
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- Premisecitation
Hydroxychloroquine interferes with TLRs and cyclic GMP-AMP synthase (cGAS), dampening downstream pro-inflammatory cytokine and type I IFN production.
“Hydroxychloroquine is an anti-malarial that interferes with TLRs and cyclic GMP-AMP synthase (cGAS), dampening downstream pro-inflammatory cytokine and type I IFN production (60).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [60] Schrezenmeier, 2020, Mechanisms of action of hydroxychloroquine and chloroquine:implications for rheumatology, Nat Rev Rheumatol source
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- Premisecitation
Emerging evidence shows variations in PI effectiveness across cell types and AAV serotypes.
“Emerging evidence showing variations in PI effectiveness across cell types and AAV serotypes (88), which warrants further study.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [88] Chaanine, 2014, Effect of bortezomib on the efficacy of AAV9.SERCA2a treatment to preserve cardiac function in a rat pressure-overload model of heart failure, Gene Ther source
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- Premisecitation
Variable responses have been observed in RTX's effect on reducing pre-existing AAV NAb.
“Variable responses have been observed in RTX’s effect on reducing pre-existing AAV NAb.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [50] Mingozzi, 2013, Prevalence and pharmacological modulation of humoral immunity to AAV vectors in gene transfer to synovial tissue, Gene Ther source
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- Premisecitation
A high throughput screening study identified teniposide, a type II topoisomerase inhibitor pharmacologically similar to etoposide, as a potent transduction enhancer.
“Several chemotherapy agents were evaluated previously (91, 93) and a high throughput screening study identified teniposide, a type II topoisomerase inhibitor pharmacologically similar to etoposide, as a potent transduction enhancer (94).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [94] Nicolson, 2016, Identification and Validation of Small Molecules That Enhance Recombinant Adeno-associated Virus Transduction following High-Throughput Screens, J Virol source
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- Premisecitation
Imlifidase is a IgG-degrading cysteine protease derived from Streptococcus pyogenes (IdeS), which specifically cleaves opsonizing IgG at the lower hinge region of the heavy chains, resulting in a F(ab')2 and a non-functioning dimeric Fc fragment.
“Imlifidase (Idefirix, Hansa Biopharma) is a IgG-degrading cysteine protease derived from Streptococcus pyogenes (IdeS), which specifically cleaves opsonizing IgG at the lower hinge region of the heavy chains, resulting in a F(ab’)2 and a non-functioning dimeric Fc fragment (82).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [82] Lorant, 2018, Safety, immunogenicity, pharmacokinetics, and efficacy of degradation of anti-HLA antibodies by IdeS (imlifidase) in chronic kidney disease patients, Am J Transplant source
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- Premisecitation
A preclinical model for hemophilia B showed RTX with ciclosporin dampened NAb response to human FIX and capsid without affecting Treg.
“A preclinical model for hemophilia B showed RTX with ciclosporin dampened NAb response to human FIX and capsid without affecting Treg (51).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [51] Mingozzi, 2012, Pharmacological modulation of humoral immunity in a nonhuman primatemodel of AAV gene transfer for hemophilia B, Mol Ther (Nat Publ Group) source
Not checked in the free run.
- Premisecitation
Traditional chemotherapeutics directly or indirectly induce DNA damage, thereby initiating DNA damage response (DDR) to repair lesions.
“As traditional chemotherapeutics directly or indirectly induce DNA damage, thereby initiating DNA damage response (DDR) to repair lesions (90), it has been postulated that these repair mechanisms could increase conversion of rAAV genome into dsDNA (91), or divert DDR proteins that would otherwise impede dsDNA production (92).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [90] Woods, 2013, Chemotherapy induced DNA damage response Convergence of drugs and pathways, Cancer Biol Ther source
Not checked in the free run.
- Premisecitation
No adaptive immune response towards SaCas9 was reported.
“no adaptive immune response towards SaCas9 was reported (113)”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [113] Maeder, 2019, Development of a gene-editing approach to restore vision loss in Leber congenital amaurosis type 10, Nat Med source
Not checked in the free run.
- Premisecitation
A late-phase innate response triggered by ITRs' inherent promoter activity generates dsRNA that activates cytosolic MDA5 sensors and releases type I interferons, as demonstrated in mice xenografted with human hepatocytes.
“A proposed late-phase innate response triggered by ITRs’ inherent promoter activity that generates dsRNA that activates cytosolic MDA5 sensors and releases type I interferons as demonstrated in mice xenografted with human hepatocytes (108), poses further questions as to the ideal immunosuppression regimen.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [108] Shao, 2018, Double-stranded RNA innate immune response activation from long-term adeno-associated virus vector transduction, JCI Insight source
Not checked in the free run.
- Premisecitation
The relationship between resolution of transaminitis by corticosteroids and T-cell response is not always clear, as observed in a hemophilia A trial.
“Corticosteroids are the most commonly used agents to resolve transaminitis, however, its relationship with resolution by corticosteroids and T-cell response are not always clear as observed in a hemophilia A trial (28, 105).”
Quote in the paperNot a substantial claim0 of 2 sources checked - Premisecitation
In mice, pre-existing SaCas9 immunity resulted in increased CTL response leading to hepatocyte apoptosis and loss of transgene.
“Studies showed pre-existing SaCas9 immunity in mice resulted in increased CTL response leading to hepatocyte apoptosis and loss of transgene (112).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [112] Li, 2020, AAV-CRISPR Gene Editing Is Negated by Pre-existing Immunity to Cas9, Mol Ther source
Not checked in the free run.
- Premisecitation
There is a lack of fully predictive animal models.
“the lack of fully predictive animal models (3, 109)”
Quote in the paperNot a substantial claim0 of 2 sources checked - Premisecitation
There is a possibility of alternative, non-immune-mediated toxicity such as dorsal root ganglion toxicity with AAV9.
“possibility of alternative, non-immune-mediated toxicity such as dorsal root ganglion toxicity with AAV9 (110)”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [110] Hordeaux, 2020, MicroRNA-mediated inhibition of transgene expression reduces dorsalroot ganglion toxicity by AAV vectors in primates, Sci Transl Med source
Not checked in the free run.
- Premisecitation
The prevalence of anti-SaCas9 antibodies and T-cell in humans is reported to be 78%.
“One concern is that the prevalence of anti-SaCas9 antibodies and T-cell in humans are reported to be 78% (111).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [111] Charlesworth, 2019, Identification of preexisting adaptive immunity to Cas9 proteins in humans, Nat Med source
Not checked in the free run.
- Interpretationreasoning
Data on immune response to SaCas9 in the eye will not necessarily predict immune response in humans or systemic administration.
“these data will not necessarily predict immune response in humans or systemic administration.”
Quote in the paperSubstantial claim- Rests on an assumption: The eye is a relatively immunoprivileged site.
- May combine two claims. 41
- Classified as probably not a substantial claim. 10
May combine two claims.
InterpretationreasoningImmune responses to rAAV pose concerns over reduction or complete loss of efficacy, options for re-administration, and other unwanted immunological sequelae such as local tissue damage.
“While extent of response can be influenced by dosing, administration route and target organ(s), these pose concerns over reduction or complete loss of efficacy, options for re-administration, and other unwanted immunological sequalae such as local tissue damage.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationAAV has a 4.7kb single-stranded DNA genome containing 4 open reading frames (rep, cap, aap, and MAAP) flanked by inverted terminal repeats (ITRs).
“It is 4.7kb single-stranded DNA genome containing 4 open reading frames (ORFs) (rep, cap, aap, and MAAP) flanked by inverted terminal repeats (ITRs) (1, 2).”
Quote in the paperNot a substantial claim0 of 2 sources checkedClassified as probably not a substantial claim.
PremisereasoningrAAV has emerged as a leading vector to deliver genetic therapies due to its ability to transduce diverse cell types and safety profile.
“It has emerged as a leading vector to deliver genetic therapies due to its ability to transduce diverse cell types and safety profile.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationAAV is a 26nm, non-enveloped virus of Parvoviridae family.
“Adeno-associated virus (AAV) is a 26nm, non-enveloped virus of Parvoviridae family.”
Quote in the paperNot a substantial claim0 of 2 sources checkedMay combine two claims.
PremisecitationThe seroprevalence of AAV2 is high (60%), limiting patients suitable for rAAV therapy.
“Most rAAV clinical trials exclude seropositive patients; given the high seroprevalence (60% for AAV2), limiting patients suitable for rAAV therapy (7, 8).”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [7] Calcedo, 2009, Worldwide Epidemiology of Neutralizing Antibodies to Adeno-Associated Viruses, J Infect Dis source
Not checked in the free run.
- cites [8] Li, 2012, Neutralizing antibodies against adeno-associated virus examinedprospectively in pediatric patients with hemophilia, Gene Ther source
Not checked in the free run.
May combine two claims.
PremisereasoningPatients are excluded from rAAV therapy if they harbor anti-AAV antibodies or have received gene therapy previously.
“To reduce said immunological risks, patients are excluded if they harbor anti-AAV antibodies or have received gene therapy previously.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationMycophenolate mofetil (MMF), prodrug of mycophenolic acid, preferentially inhibits type II IMPDH, suppressing T and B cells proliferation.
“Mycophenolate mofetil (MMF), prodrug of mycophenolic acid, preferentially inhibits type II IMPDH, suppressing T and B cells proliferation (74).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [74] Allison, 2005, Mechanisms of action of mycophenolate mofetil, Lupus source
Not checked in the free run.
May combine two claims.
PremisecitationCiclosporin and tacrolimus were found to inhibit Treg proliferation and activity in vitro, and similar effects were observed in tacrolimus-treated allograft patients ex vivo.
“Ciclosporin and tacrolimus were found to inhibit Treg proliferation and activity in vitro (79), and similar effects were observed in tacrolimus-treated allograft patients ex vivo (80); this could be detrimental in inhibiting the development of peripheral tolerance following rAAV administration.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [79] Miroux, 2012, In vitro effects of cyclosporine a and tacrolimus on regulatoryt-cell proliferation and function, Transplantation source
Not checked in the free run.
- cites [80] Akimova, 2012, Differing effects of rapamycin or calcineurin inhibitor onT-Regulatory cells in pediatric liver and kidney transplant recipients, Am J Transplant source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationUnmethylated CpG motifs in rAAV vector genome have been suggested as the cause of loss of expression in a rAAV8 hemophilia B trial.
“and has been suggested as the cause of loss of expression in a rAAV8 hemophilia B trial (21).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [21] Konkle, 2021, BAX 335 hemophilia B gene therapy clinical trial results: potential impact of CpG sequences on gene expression, Blood source
Not checked in the free run.
May combine two claims.
Premisenone givenRapamycin binds to the same intracellular target (immunophilin) as tacrolimus; however, rapamycin/FKPB12 complex inhibits a crucial cell-cycle kinase known as mammalian target of rapamycin (mTOR).
“Rapamycin is a macrolide immunosuppressant that binds to the same intracellular target (immunophilin) as tacrolimus; however, rapamycin/FKPB12 complex inhibits a crucial cell-cycle kinase known as mammalian target of rapamycin (mTOR).”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationIn the rAAV2 hemophilia B clinical trial, initial stable therapeutic factor IX (FIX) expression (>10% activity) lasted for 4 weeks, then FIX levels gradually declined to baseline (<1%).
“Despite initial stable therapeutic factor IX (FIX) expression (>10% activity) for 4 weeks, FIX levels gradually declined to baseline (<1%).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [12] Manno, 2006, Successful transduction of liver in hemophilia by AAV-Factor IX and limitations imposed by the host immune response, Nat Med source
Not checked in the free run.
May combine two claims.
PremisecitationRapamycin has beneficial downstream effects including Treg generation, suppressing CTL and T helper (TH) activation and at higher doses, B-cell proliferation and differentiation.
“Beneficial downstream effects include Treg generation, suppressing CTL and T helper (TH) activation and at higher doses, B-cell proliferation and differentiation (69–71).”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [69] Limon, 2014, MTOR kinase inhibitors promote antibody class switching via mTORC2 inhibition source
Not checked in the free run.
- cites [70] Delgoffe, 2009, The mTOR Kinase Differentially Regulates Effector and Regulatory T Cell Lineage Commitment
Not checked in the free run.
- cites [71] Zeiser, 2008, Differential impact of mammalian target of rapamycin inhibition on CD4 +CD25+Foxp3+ regulatory T cells compared with conventional CD4+ T cells, Blood source
Not checked in the free run.
May combine two claims.
PremisecitationNo generalized toxicity was reported with daily tacrolimus in NHP, but T-cell and macrophages infiltrations were observed.
“No generalized toxicity was reported but T-cell and macrophages infiltrations were observed.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [47] Ishii, 2020, rAAV8 and rAAV9-Mediated Long-Term Muscle Transduction with Tacrolimus (FK506) in Non-Human Primates, Mol Ther - Methods Clin Dev source
Not checked in the free run.
May combine two claims.
PremisecitationIn mice MMF reduced rAAV transduction efficiency by depleting guanosine triphosphate required for vector genome second strand synthesis, but this was not observed in higher animals.
“In mice MMF reduced rAAV transduction efficiency by depleting guanosine triphosphate required for vector genome second strand synthesis (75), but this was not observed in higher animals.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [75] Montenegro-Miranda, 2011, Mycophenolate mofetil impairs transduction of single-stranded adeno-associated viral vectors, Hum Gene Ther source
Not checked in the free run.
May combine two claims.
PremisecitationCCS are adopted in approved gene therapies for inherited retinal dystrophy and spinal muscle atrophy (SMA).
“They are also adopted in approved gene therapies for inherited retinal dystrophy (25) and spinal muscle atrophy (SMA) (26).”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [25] Russell, 2017, Efficacy and safety of voretigene neparvovec (AAV2-hRPE65v2) in patients with RPE65-mediated inherited retinal dystrophy: a randomised, controlled, open-label, phase 3 trial, Lancet source
Not checked in the free run.
- cites [26] Mendell, 2017, Single-Dose Gene-Replacement Therapy for Spinal Muscular Atrophy, N Engl J Med source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationrAAV capsid-targeting TLR2, various DNA sensors, and complement activation may also play a role.
“Furthermore, rAAV capsid-targeting TLR2, various DNA sensors, and complement activation may also play a role (22).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [22] Muhuri, 2021, Overcoming innate immune barriers that impede AAV gene therapy vectors, J Clin Invest source
Not checked in the free run.
May combine two claims.
PremisecitationSVP[Rapa] provided sufficient reduction of B and T cell activation in an antigen-selective manner, inhibited CTL liver infiltration, and efficiently blocked memory T cell response.
“SVP [Rapa] provided sufficient reduction of B and T cell activation in an antigen-selective manner, inhibited CTL liver infiltration, and efficiently blocked memory T cell response.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [39] Meliani, 2018, Antigen-selective modulation of AAV immunogenicity with tolerogenicrapamycin nanoparticles enables successful vector re-administration, Nat Commun source
Not checked in the free run.
May combine two claims.
InterpretationcitationEndosomal acidification is essential for rAAV escape, and hydroxychloroquine increases endosomal and lysosomal pH, so the effect may not be replicated or consistent with systemic application.
“However, endosomal acidification is essential for rAAV escape (84), and hydroxychloroquine increases endosomal and lysosomal pH (60), this effect may not be replicated or consistent with systemic application.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [84] Dhungel, 2020, Journey to the Center of the Cell: Tracing the Path of AAV Transduction, Trends Mol Med source
Not checked in the free run.
- cites [60] Schrezenmeier, 2020, Mechanisms of action of hydroxychloroquine and chloroquine:implications for rheumatology, Nat Rev Rheumatol source
Not checked in the free run.
May combine two claims.
PremisecitationRituximab depletes B cells by inducing apoptosis, antibody dependent cell-mediated cytotoxicity and complement dependent cytotoxicity, thereby limiting antibody production and epitope presentation via MHC class II to TH cells.
“It depletes B cells by inducing apoptosis, antibody dependent cell-mediated cytotoxicity and complement dependent cytotoxicity, thereby limiting antibody production and epitope presentation via MHC class II to TH cells (81).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [81] Smith, 2003, Rituximab (monoclonal anti-CD20 antibody): Mechanisms of action and resistance, Oncogene source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationProteasome inhibitors (PIs) are licensed for multiple myeloma.
“Proteasome inhibitors (PIs) are licensed for multiple myeloma.”
Quote in the paperNot a substantial claim0 of 2 sources checkedClassified as probably not a substantial claim. May combine two claims.
InterpretationcitationIt is possible by postponing rATG lowers the Th17/Treg ratio, allowing peripheral tolerance to the transgene product.
“It is possible by postponing rATG lowers the Th17/Treg ratio, allowing peripheral tolerance to the transgene product (41).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [41] Samelson-Jones, 2020, Timing of Intensive Immunosuppression Impacts Risk of TransgeneAntibodies after AAV Gene Therapy in Nonhuman Primates, Mol Ther - Methods Clin Dev source
Not checked in the free run.
May combine two claims.
PremisecitationIn NHP, rAAV2-hFIX (8×10^12vg/kg) delivered intrahepatically alongside 2-drug regimen of MMF and rapamycin compared to 3-drug adding Daclizumab, the addition of daclizumab resulted in decreased CD4+CD25+FoxP3+ Treg and consistent formation of inhibitory antibodies to hFIX; this was not observed in the 2-drug group.
“rAAV2-hFIX (8×1012vg/kg) was delivered intrahepatically to NHP alongside 2-drug regimen of MMF and rapamycin compared to 3-drug adding Daclizumab (40). The addition of daclizumab resulted in decreased CD4+CD25+FoxP3+ Treg and consistent formation of inhibitory antibodies to hFIX; this was not observed in the 2-drug group.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [40] Mingozzi, 2007, Modulation of tolerance to the transgene product in a nonhuman primate model of AAV-mediated gene transfer to liver, Blood source
Not checked in the free run.
May combine two claims.
PremisecitationIntraperitoneal ATO 5μg/g/day from day -2 to 2 showed 3.9-fold increase in luciferase assay 12 days after rAAV8 retro-orbital injection, with dose-dependent increase of intracellular reactive oxygen species that inhibit vector degradation pathways.
“Intraperitoneal ATO 5μg/g/day from day -2 to 2 showed 3.9-fold increase in luciferase assay 12 days after rAAV8 retro-orbital injection, with dose-dependent increase of intracellular reactive oxygen species that inhibit vector degradation pathways (59).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [59] Mitchell, 2013, Arsenic Trioxide Stabilizes Accumulations of Adeno-Associated Virus Virions at the Perinuclear Region, Increasing Transduction In Vitro and In Vivo, J Virol source
Not checked in the free run.
May combine two claims.
PremisecitationBoth bortezomib and carfilzomib enhance rAAV2 transduction in vitro, but bortezomib is more efficacious than carfilzomib in vivo when administered by retro-orbital injection with rAAV2.
“Both bortezomib and carfilzomib enhance rAAV2 transduction in vitro, but bortezomib is more efficacious than carfilzomib in vivo when administered by retro-orbital injection with rAAV2 (56).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [56] Mitchell, 2013, Mechanistic Insights into the Enhancement of Adeno-Associated Virus Transduction by Proteasome Inhibitors, J Virol source
Not checked in the free run.
May combine two claims.
InterpretationreasoningDrug selection, initiation and duration of suppression, and role of global immunosuppression are important considerations.
“This suggests that drug selection, initiation and duration of suppression, and role of global immunosuppression are important considerations.”
Quote in the paperSubstantial claimMay combine two claims.
InterpretationcitationCareful selection of immunosuppressive agents is necessary as Treg play a critical role in regulating immune response to rAAV products, particularly observed in liver and muscle gene transfer.
“This indicates careful selection of immunosuppressive agents is necessary as Treg play a critical role in regulating immune response to rAAV products, particularly observed in liver and muscle gene transfer (97).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [97] Biswas, 2018, Gene therapy with regulatory T cells: A beneficial alliance, Front Immunol source
Not checked in the free run.
May combine two claims.
PremisecitationBortezomib has been shown to dose-dependently decrease cell surface MHC class I antigen presentation and inhibit CTL-mediated lysis after rAAV administration in vitro.
“Bortezomib has been shown to dose-dependently decrease cell surface MHC class I antigen presentation and inhibit CTL-mediated lysis after rAAV administration in vitro (87).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [87] Finn, 2010, Proteasome inhibitors decrease AAV2 capsid derived peptide epitope presentation on mhc class i following transduction, Mol Ther source
Not checked in the free run.
May combine two claims.
PremisecitationIn the first IdeS re-administration study (n=1), no induction of anti-capsid IgG and NAb, along with lower IgM and increased transgene level was observed for 21 days after second rAAV8-hFIX administration.
“In the first study (n=1), no induction of anti-capsid IgG and NAb, along with lower IgM and increased transgene level was observed for 21 days after second rAAV8-hFIX administration.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [53] Leborgne, 2020, IgG-cleaving endopeptidase enables in vivo gene therapy in the presence of anti-AAV neutralizing antibodies, Nat Med source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationDaclizumab is a humanized monoclonal antibody targeting CD25 present on interleukin-2 receptor commonly found in activated T cells and CD4+CD25+FoxP3+.
“Daclizumab is a humanized monoclonal antibody targeting CD25 present on interleukin-2 receptor commonly found in activated T cells and CD4+CD25+FoxP3+ (96).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [96] Milo, 2014, The efficacy and safety of daclizumab and its potential role in thetreatment of multiple sclerosis, Ther Adv Neurol Disord source
Not checked in the free run.
May combine two claims.
PremisecitationUsing a laboratory version of IdeS with rAAV8, significant reductions in anti-AAV8 IgG and NAb levels, with enhanced liver transduction and transgene expression, were observed in passively immunized murine models and naturally immunized NHP.
“Using a laboratory version of IdeS with rAAV8, significant reductions in anti-AAV8 IgG and NAb levels, with enhanced liver transduction and transgene expression and observed in passively immunized murine models and naturally immunized NHP (53).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [53] Leborgne, 2020, IgG-cleaving endopeptidase enables in vivo gene therapy in the presence of anti-AAV neutralizing antibodies, Nat Med source
Not checked in the free run.
May combine two claims.
PremisecitationThe proteasome degradation pathway results in unsuccessful transduction, and capsid-derived peptides are presented to CTL by MHC class I molecules, provoking elimination of transduced cells and loss of transgene expression.
“The latter pathway results in unsuccessful transduction, and capsid-derived peptides are presented to CTL by MHC class I molecules, provoking elimination of transduced cells and loss of transgene expression (85).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [85] Wang, 2019, Adeno-associated virus vector as a platform for gene therapy delivery, Nat Rev Drug Discovery source
Not checked in the free run.
May combine two claims.
PremisecitationFor AAV2, 9/28 patients showed at least a half-log reduction, and individuals with NAb titer ≤1:1000 were more likely to respond to RTX.
“For AAV2, 9/28 patients showed at least a half-log reduction, and inferred individuals with NAb titer ≤1:1000 were more likely to respond to RTX but the contribution of methotrexate is unknown.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [50] Mingozzi, 2013, Prevalence and pharmacological modulation of humoral immunity to AAV vectors in gene transfer to synovial tissue, Gene Ther source
Not checked in the free run.
May combine two claims.
PremisecitationA single bortezomib dose given with rAAV8 dosing enhanced transgene expression by >50% for one year (compared to ~10%) in hemophilia A mice, and longer in-range clotting time for at least 10 months in hemophilia A dogs.
“Moreover, a single bortezomib dose given with rAAV8 dosing enhanced transgene expression by >50% for one year (compared to ~10%) in hemophilia A mice, and longer in-range clotting time for at least 10 months in hemophilia A dogs (57).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [57] Monahan, 2010, Proteasome inhibitors enhance gene delivery by AAV virus vectors expressing large genomes in hemophilia mouse and dog models: A strategy for broad clinical application, Mol Ther source
Not checked in the free run.
May combine two claims.
PremisecitationA 5-drug regimen with rAAV5-PBGD 1×10^13vg/kg infusion resulted in reduced T-cell response in NHP, but did not prevent NAb emergence following regimen removal.
“This 5-drug regimen with rAAV5-PBGD 1×1013vg/kg infusion resulted in reduced T-cell response in NHP, but did not prevent NAb emergence following regimen removal.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [99] Unzu, 2012, Transient and intensive pharmacological immunosuppression fails to improve AAV-based liver gene transfer in non-human primates, J Transl Med source
Not checked in the free run.
May combine two claims.
PremisecitationTail vein injection of rAAV2-Luc with teniposide (at doses of 1×10^11vg and 20mg/kg respectively) resulted in bioluminescence 2-log higher 48 hours post-administration without hepatotoxicity.
“Tail vein injection of rAAV2-Luc with teniposide (at doses of 1×1011vg and 20mg/kg respectively) resulted in bioluminescence 2-log higher 48 hours post-administration without hepatotoxicity.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [94] Nicolson, 2016, Identification and Validation of Small Molecules That Enhance Recombinant Adeno-associated Virus Transduction following High-Throughput Screens, J Virol source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationRituximab (RTX) is a chimeric mouse/human monoclonal antibody targeting CD20 present in pre‐B and mature B cells except plasma cells.
“Rituximab (RTX) is a chimeric mouse/human monoclonal antibody targeting CD20 present in pre‐B and mature B cells except plasma cells.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [81] Smith, 2003, Rituximab (monoclonal anti-CD20 antibody): Mechanisms of action and resistance, Oncogene source
Not checked in the free run.
May combine two claims.
Interpretationnone givenHuman immune responses to the viral vector, transgene, and protein product determine the therapeutic efficacy and possibility of re-administration.
“However, human immune responses to the viral vector, transgene, and protein product determine the therapeutic efficacy and possibility of re-administration.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationStudies showed cross-reactive anti-capsid NAb present at 15 years, CTL and Treg infiltrates at injection site after 5 years; and in NHP adverse effects related to high-dosage.
“Studies showed cross-reactive anti-capsid NAb present at 15 years (100), CTL and Treg infiltrates at injection site after 5 years (101); and in NHP adverse effects related to high-dosage (42, 66).”
Quote in the paperSubstantial claim0 of 4 sources checked- cites [100] George, 2020, Long-Term Follow-Up of the First in Human Intravascular Delivery ofAAV for Gene Transfer: AAV2-hFIX16 for Severe Hemophilia B, Mol Ther source
Not checked in the free run.
- cites [101] Mueller, 2017, 5 Year Expression and Neutrophil Defect Repair after Gene Therapy in Alpha-1 Antitrypsin Deficiency, Mol Ther source
Not checked in the free run.
- cites [42] Hordeaux, 2018, Toxicology Study of Intra-Cisterna Magna Adeno-Associated Virus 9 Expressing Iduronate-2-Sulfatase in Rhesus Macaques source
Not checked in the free run.
- cites [66] Hinderer, 2018, Severe Toxicity in Nonhuman Primates and Piglets Following High-Dose Intravenous Administration of an Adeno-Associated Virus Vector Expressing Human SMN, Hum Gene Ther source
Not checked in the free run.
May combine two claims.
PremisecitationIn the delayed rATG study, neither group had cellular response to capsid or transgene, and 2 of 3 NHP in the delayed rATG group did not develop anti-capsid antibodies.
“Neither group had cellular response to capsid or transgene, and 2 of 3 NHP in the delayed rATG group did not develop anti-capsid antibodies.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [41] Samelson-Jones, 2020, Timing of Intensive Immunosuppression Impacts Risk of TransgeneAntibodies after AAV Gene Therapy in Nonhuman Primates, Mol Ther - Methods Clin Dev source
Not checked in the free run.
May combine two claims.
PremisecitationAlthough no toxicity was found in the animal models, peripheral neuropathy and myelosuppression are adverse effects observed in humans for PIs.
“Although no toxicity was found in the animal models, peripheral neuropathy and myelosuppression are adverse effects observed in humans (54).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [54] Merin, 2014, Clinical use of proteasome inhibitors in the treatment of multiple myeloma, Pharmaceuticals source
Not checked in the free run.
May combine two claims.
PremisecitationAfter endosomal escape, rAAV particles either enter the nucleus for transgene expression, or become ubiquitylated then degraded by proteasome.
“After endosomal escape, rAAV particles either enter the nucleus for transgene expression, or become ubiquitylated then degraded by proteasome (84).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [84] Dhungel, 2020, Journey to the Center of the Cell: Tracing the Path of AAV Transduction, Trends Mol Med source
Not checked in the free run.
May combine two claims.
PremisecitationIn a larger cohort (n=5) immunized with rAAV-LK03, anti-capsid IgM and IgG developed, not replicating the first IdeS re-administration result.
“However, this was not replicated in a larger cohort (n=5) immunized with rAAV-LK03, that developed anti-capsid IgM and IgG.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [53] Leborgne, 2020, IgG-cleaving endopeptidase enables in vivo gene therapy in the presence of anti-AAV neutralizing antibodies, Nat Med source
Not checked in the free run.
May combine two claims.
PremisecitationSecond-generation carfilzomib is irreversible and more specifically inhibits chymotrypsin-like activity than bortezomib, the reversible first-generation inhibitor, which also inhibits lysosomal and calcium-activated cellular proteases.
“Second-generation carfilzomib is irreversible and more specifically inhibits chymotrypsin-like activity than bortezomib, the reversible first-generation inhibitor, which also inhibits lysosomal and calcium-activated cellular proteases (54, 83).”
Quote in the paperNot a substantial claim0 of 2 sources checkedMay combine two claims.
PremisecitationIntraperitoneal MnTBAP 80mg/kg/day from day 0-4 reversibly downregulated CD4 on T cells, inhibiting T cell priming and humoral responses to initial rAAV1 dosing, and allowing re-administration of rAAV1 via a different route 28 days later.
“Intraperitoneal MnTBAP 80mg/kg/day from day 0-4 reversibly downregulated CD4 on T cells, inhibiting T cell priming and humoral responses to initial rAAV1 dosing, and allowing re-administration of rAAV1 via a different route 28 days later (95).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [95] Da Rocha, 2019, Temporary Reduction of Membrane CD4 with the Antioxidant MnTBAP Is Sufficient to Prevent Immune Responses Induced by Gene Transfer, Mol Ther - Methods Clin Dev source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationCRISPR-Cas9 allows genetic target-specific cleavage and editing.
“CRISPR-Cas9 is a promising therapeutic tool that allows genetic target-specific cleavage and editing (111).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [111] Charlesworth, 2019, Identification of preexisting adaptive immunity to Cas9 proteins in humans, Nat Med source
Not checked in the free run.
May combine two claims.
PremisecitationTreg in liver and their persistence in muscle fibers after intermuscular delivery have been reported.
“Reports on Treg in liver and their persistence in muscle fibers after intermuscular delivery (17) further emphasizes the need for Treg-sparing therapies.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [17] Mueller, 2013, Human treg responses allow sustained recombinant adeno-associatedvirus-mediated transgene expression, J Clin Invest source
Not checked in the free run.
May combine two claims.
InterpretationreasoningThe timing of immunomodulation, duration, and drug regimen itself have contributed to treatment efficacy.
“As summarized above, a range of pharmacological agents have been used in clinical and preclinical studies, and the timing of immunomodulation, duration, and drug regimen itself have all contributed to treatment efficacy.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationIn mice, binding (non-neutralizing) antibodies have a different biodistribution profile than NAb and higher efficacy in liver transduction.
“Moreover, binding (non-neutralizing) antibodies in mice seemed to have a different biodistribution profile than NAb and higher efficacy in liver transduction (107).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [107] Fitzpatrick, 2018, Influence of Pre-existing Anti-capsid Neutralizing and Binding Antibodies on AAV Vector Transduction, Mol Ther - Methods Clin Dev source
Not checked in the free run.
The paper relies on this without support.
The eye is a relatively immunoprivileged site.
“the eye is a relatively immunoprivileged site”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Prednisone, prednisolone, and dexamethasone were used pre-operation (1 to 3 days) and post-surgery (up to three weeks), orally or locally, in multiple clinical trials and with Luxturna.
“Representatives of this family include prednisone, prednisolone, and dexamethasone, which were used pre-operation (for 1 to 3 days) as well as post-surgery (for longer periods of time, up to three weeks), taken orally or applied locally, in multiple clinical trials as well as in conjunction with EMA-and FDA-approved Luxturna [131,132].”
From Risk mitigation of immunogenicity: a key to personalized retinal gene therapy (2021) · cites this paper as [131]
In recent clinical trials, glucocorticoids have been the most widely used anti-inflammatory drugs.
“In recent clinical trials, glucocorticoids have been the most widely used anti-inflammatory drugs.”
From Risk mitigation of immunogenicity: a key to personalized retinal gene therapy (2021) · cites this paper as [131]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
Each contradiction between two passages listed here was confirmed by an independent check.
Mouse rapamycin study is classified as clinical
MinorTable 1 classifies the AAV8 rapamycin combination study cited as reference 37 as clinical, but the text describes that same study as a murine model.
“| Rapamycin (34, 35) | Prophylaxis of organ rejection after transplantation | Thrombocytopenia, dyslipidemia, mucositis, impaired wound healing, proteinuria | AAV1 (36), AAV8 (37), AAV9 (38), AAVrh10 (29) | Clinical as combination |”
“In a murine hemophilia A model, rapamycin (4mg/kg three times a week) was given in addition to B-cell depleting anti-CD20 antibodies to suppress TH and Treg response suppressing inhibitor development (37).”
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Introduction to AAV ‐based in vivo Gene Therapy
Segurado, O. G. (2024) · doi:10.1002/9781119852810.ch1
- Authors
- Chu, W. S., & Ng, J.
- Affiliations
- Royal Marsden NHS Foundation Trust (GB)
- University College London (GB)
- Corresponding author
- Ng, Joanne
- Venue
- Frontiers in Immunology
- Publisher
- Frontiers Media SA
- Published
- 2021-04-01
- Volume
- 12
- Pages
- 658038-658038
- ISSN
- 1664-3224 (ISSN-L)
- PMC
- PMC8049138
- OpenAlex
- W3149013390
- Cited by
- 59
- References
- 118
- Citations by year
- 2026: 5 · 2025: 14 · 2024: 9 · 2023: 16 · 2022: 14 · 2021: 1
- FWCI
- 1.47
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- Frontiers in Immunology (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- UCL Discovery (University College London) (submittedVersion)
- Funders
- Rosetrees Trust (MR/R015325/1, V1284)
- Great Ormond Street Hospital Charity (MR/R015325/1, V1284)
- Robert Luff Foundation (V1284, MR/R015325/1)
- Medical Research Council (V1284, MR/R015325/1, MR/K02342X/1)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Virus-based gene therapy research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Interference and Gene Delivery
- Life Sciences › Immunology and Microbiology › Immunology › Immunotherapy and Immune Responses
- Keywords
- recombinant adeno-associated virus, gene therapy, immunomodulation, immunosuppression, innate and adaptive immunity, corticosteroids, Luxturna, Zolgensma, adjuvant pharmacotherapy, pre-existing immunity
- MeSH terms
- Clinical Studies as Topic, Dependovirus, Animals, Combined Modality Therapy, Drug Evaluation, Preclinical, Genetic Vectors, Humans, Immunity, Cellular, Immunologic Factors, Genetic Therapy, Gene Transfer Techniques, Transgenes, Immunity, Humoral, Immunomodulation, Cell- and Tissue-Based Therapy
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Claims read by deepseek-v4.1-flash under definition version 3 (extract-v3) on 2026-10-06.
Classified by jev-1.13-20260917 (gold-guideline-v0.2) on 2026-10-06.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
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