P bodies and the control of mRNA translation and degradation

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

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A comprehensive two-hybrid analysis to explore the yeast protein interactome

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Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

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Proteome survey reveals modularity of the yeast cell machinery

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Stress granules and processing bodies are dynamically linked sites of mRNP remodeling

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Inhibition of Translational Initiation by Let-7 MicroRNA in Human Cells

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Decapping and Decay of Messenger RNA Occur in Cytoplasmic Processing Bodies

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Regulation by let-7 and lin-4 miRNAs Results in Target mRNA Degradation

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Relief of microRNA-Mediated Translational Repression in Human Cells Subjected to Stress

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MicroRNA-dependent localization of targeted mRNAs to mammalian P-bodies

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Nonsense-mediated mRNA decay: splicing, translation and mRNP dynamics

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mRNA degradation by miRNAs and GW182 requires both CCR4:NOT deadenylase and DCP1:DCP2 decapping complexesPreprint

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Stress Granule Assembly Is Mediated by Prion-like Aggregation of TIA-1

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RNA granules

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Regulation of cap-dependent translation by eIF4E inhibitory proteins

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P bodies: at the crossroads of post-transcriptional pathways

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The enzymes and control of eukaryotic mRNA turnover

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Movement of Eukaryotic mRNAs Between Polysomes and Cytoplasmic Processing Bodies

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Processing bodies require RNA for assembly and contain nontranslating mRNAs

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A role for the P-body component GW182 in microRNA function

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INTERRELATIONSHIPS OF THE PATHWAYS OF mRNA DECAY AND TRANSLATION IN EUKARYOTIC CELLS

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Cytoplasmic foci are sites of mRNA decay in human cells

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Binding of a novel SMG-1–Upf1–eRF1–eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decayPreprint

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Argonaute 2/RISC resides in sites of mammalian mRNA decay known as cytoplasmic bodies

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General Translational Repression by Activators of mRNA Decapping

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Identification of Novel Argonaute-Associated Proteins

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A faux 3′-UTR promotes aberrant termination and triggers nonsense- mediated mRNA decay

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Translation Repression in Human Cells by MicroRNA-Induced Gene Silencing Requires RCK/p54

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TIA‐1 is a translational silencer that selectively regulates the expression of TNF‐α

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Disruption of GW bodies impairs mammalian RNA interference

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Human Dcp2: a catalytically active mRNA decapping enzyme located in specific cytoplasmic structures

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A crucial role for GW182 and the DCP1:DCP2 decapping complex in miRNA-mediated gene silencing

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Eukaryotic mRNA Decapping

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Multiple Processing Body Factors and the ARE Binding Protein TTP Activate mRNA Decapping

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Premature translational termination triggers mRNA decapping

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A role for eIF4E and eIF4E-transporter in targeting mRNPs to mammalian processing bodies

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The human LSm1-7 proteins colocalize with the mRNA-degrading enzymes Dcp1/2 and Xrn1 in distinct cytoplasmic foci

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Drosophila cup is an eIF4E binding protein that associates with Bruno and regulates oskar mRNA translation in oogenesis.

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Nonsense-Mediated mRNA Decay in Mammalian Cells Involves Decapping, Deadenylating, and Exonucleolytic Activities

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Stressful initiations

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Identification of a Human Decapping Complex Associated with hUpf Proteins in Nonsense-Mediated Decay

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Gene expression during acute and prolonged hypoxia is regulated by distinct mechanisms of translational control

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Staufen- and FMRP-Containing Neuronal RNPs Are Structurally and Functionally Related to Somatic P Bodies

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The DEAD box helicase, Dhh1p, functions in mRNA decapping and interacts with both the decapping and deadenylase complexes

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A Mouse Cytoplasmic Exoribonuclease (mXRN1p) with Preference for G4 Tetraplex Substrates

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Messenger RNA Turnover in Eukaryotes: Pathways and Enzymes

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The chromatoid body of male germ cells: Similarity with processing bodies and presence of Dicer and microRNA pathway components

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Me31B silences translation of oocyte-localizing RNAs through the formation of cytoplasmic RNP complex duringDrosophilaoogenesis

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Inhibition of Ribosome Recruitment Induces Stress Granule Formation Independently of Eukaryotic Initiation Factor 2α Phosphorylation

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SMG7 Acts as a Molecular Link between mRNA Surveillance and mRNA Decay

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PUF proteins bind Pop2p to regulate messenger RNAs

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The translational regulator CPEB1 provides a link between dcp1 bodies and stress granules

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Targeting of Aberrant mRNAs to Cytoplasmic Processing Bodies

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Identification of a novel component of the nonsense-mediated mRNA decay pathway by use of an interacting protein screen.Preprint

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Eukaryotic Initiation Factor 2α-independent Pathway of Stress Granule Induction by the Natural Product Pateamine A

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The GW182 protein colocalizes with mRNA degradation associated proteins hDcp1 and hLSm4 in cytoplasmic GW bodies: FIGURE 1.

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The Developmental Timing Regulator AIN-1 Interacts with miRISCs and May Target the Argonaute Protein ALG-1 to Cytoplasmic P Bodies in C. elegans

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A role for the eIF4E-binding protein 4E-T in P-body formation and mRNA decay

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Subnuclear organelles: new insights into form and function

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ARE‐mRNA degradation requires the 5′–3′ decay pathway

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A complex containing the Sm protein CAR-1 and the RNA helicase CGH-1 is required for embryonic cytokinesis in Caenorhabditis elegans

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Identification and Functional Outcome of mRNAs Associated with RNA-Binding Protein TIA-1

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Human Retroviral Host Restriction Factors APOBEC3G and APOBEC3F Localize to mRNA Processing Bodies

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Ge-1 is a central component of the mammalian cytoplasmic mRNA processing body

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The DEAD box protein Dhh1 stimulates the decapping enzyme Dcp1

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Differential effects of translational inhibition in cis and in trans on the decay of the unstable yeast MFA2 mRNA

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RNA-associated protein 55 (RAP55) localizes to mRNA processing bodies and stress granules

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cgh-1, a conserved predicted RNA helicase required for gametogenesis and protection from physiological germline apoptosis inC. elegans

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Why do cells need an assembly machine for RNA–protein complexes?

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A conserved RNA-protein complex component involved in physiological germline apoptosis regulation inC. elegans

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Translational Repression by RNA-Binding Protein TIAR

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Identification of Edc3p as an Enhancer of mRNA Decapping inSaccharomyces cerevisiae

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Xp54, the Xenopus Homologue of Human RNA Helicase p54, is an Integral Component of Stored mRNP Particles in Oocytes

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A conserved role of a DEAD box helicase in mRNA masking

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The RNA polymerase II subunit Rpb4p mediates decay of a specific class of mRNAsPreprint

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Dhh1p, a Putative RNA Helicase, Associates with the General Transcription Factors Pop2p and Ccr4p from Saccharomyces cerevisiae

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Formation of GW bodies is a consequence of microRNA genesis

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RAP55, a Cytoplasmic mRNP Component, Represses Translation in Xenopus Oocytes

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Virus-like particles of the Ty3 retrotransposon assemble in association with P-body components

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Recognition of Yeast mRNAs as “Nonsense Containing” Leads to Both Inhibition of mRNA Translation and mRNA Degradation: Implications for the Control of mRNA Decapping

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Functional Genomics Reveals Relationships Between the Retrovirus-Like Ty1 Element and Its Host Saccharomyces cerevisiae

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Loss of Translational Control in Yeast Compromised for the Major mRNA Decay Pathway

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Drosophila Decapping Protein 1, dDcp1, Is a Component of the oskar mRNP Complex and Directs Its Posterior Localization in the Oocyte

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Retroviruses and yeast retrotransposons use overlapping sets of host genes.Preprint

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The yeast EDC1 mRNA undergoes deadenylation‐independent decapping stimulated by Not2p, Not4p, and Not5p

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CAR-1, a Protein That Localizes with the mRNA Decapping Component DCAP-1, Is Required for Cytokinesis and ER Organization inCaenorhabditis elegansEmbryos

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RNA helicase p54 (DDX6) is a shuttling protein involved in nuclear assembly of stored mRNP particles

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Caenorhabditis elegansDecapping Proteins: Localization and Functional Analysis of Dcp1, Dcp2, and DcpS during Embryogenesis

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Sbp1p Affects Translational Repression and Decapping in Saccharomyces cerevisiae

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Human papillomaviruses target the double-stranded RNA protein kinase pathway

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Quantitative Proteomics Identifies Gemin5, A Scaffolding Protein Involved in Ribonucleoprotein Assembly, as a Novel Partner for Eukaryotic Initiation Factor 4E

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Dcs2, a Novel Stress-induced Modulator of m7GpppX Pyrophosphatase Activity that Locates to P Bodies

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Determinants of Rbp1p Localization in Specific Cytoplasmic mRNA-processing Foci, P-bodies

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Overview of MicroRNA Biogenesis, Mechanisms of Actions, and Circulation

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The widespread regulation of microRNA biogenesis, function and decay

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