Student or educator? Sign up with your school email and get 6 months of Pro free.
CoChat
Sign Up
Cited by 2,283

The DOI matches its Crossref record; 9 of the 9 references it cites were found in a registry or an index.

Prediction of Plant MicroRNA Targets

Open access
Rhoades, Matthew W., Reinhart, Brenda J., Lim, Lee P., Burge, Christopher B., Bartel, Bonnie, Bartel, David P.·2002·Cell
DOI 10.1016/s0092-8674(02)00863-2
Open this paper in CoChat — free account

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1016/s0092-8674(02)00863-2

Cites

9 of 9 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Show all 9 references

Research works printed but not linked: 40

  1. Bernstein, 2001, The rest is silence, RNA, 7, 1509
  2. Bohmert, 1998, AGO1 defines a novel locus of Arabidopsis controlling leaf development, EMBO J., 17, 170, 10.1093/emboj/17.1.170 · DOI · Paper page
  3. Bolle, 2000, PAT1, a new member of the GRAS family, is involved in phytochrome A signal transduction, Genes Dev., 14, 1269, 10.1101/gad.14.10.1269 · DOI · Paper page
  4. Cui, 1999, Structural and transcriptional comparative analysis of the S locus regions in two self-incompatible Brassica napus lines, Plant Cell, 11, 2217, 10.1105/tpc.11.11.2217 · doi:10.1105/tpc.11.11.2217
  5. Dsouza, 1997, Searching for patterns in genomic data, Trends Genet., 13, 497, 10.1016/S0168-9525(97)01347-4 · DOI · Paper page
  6. Elbashir, 2001, Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate, EMBO J., 20, 6877, 10.1093/emboj/20.23.6877 · DOI · Paper page
  7. Gocal, 2001, GAMYB-like genes, flowering, and gibberellin signalling in Arabidopsis, Plant Physiol., 127, 1682, 10.1104/pp.010442 · doi:10.1104/pp.010442 · Paper page
  8. Grishok, 2001, Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing, Cell, 106, 23, 10.1016/S0092-8674(01)00431-7 · DOI · Paper page
  9. Ha, 1996, A bulged lin-4/lin-14 RNA duplex is sufficient for Caenorhabditis elegans lin-14 temporal gradient formation, Genes Dev., 10, 3041, 10.1101/gad.10.23.3041 · DOI · Paper page
  10. Hamilton, 1999, A novel species of small antisense RNA in posttranscriptional gene silencing, Science, 286, 950, 10.1126/science.286.5441.950 · DOI · Paper page
  11. Helariutta, 2000, The SHORT-ROOT gene controls radial patterning of the Arabidopsis root through radial signaling, Cell, 101, 555, 10.1016/S0092-8674(00)80865-X · DOI · Paper page
  12. Hutvágner, 2002, Rnai, Curr. Opin. Genet. Dev., 12, 225, 10.1016/S0959-437X(02)00290-3 · DOI · Paper page
  13. Hutvágner, 2001, A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA, Science, 293, 834, 10.1126/science.1062961 · DOI · Paper page
  14. Jacobsen, 1999, Disruption of an RNA helicase/RNAseIII gene in Arabidopsis causes unregulated cell division in floral meristems, Development, 126, 5231, 10.1242/dev.126.23.5231 · DOI · Paper page
  15. Kiss, 2002, Small nucleolar RNAs, Cell, 109, 145, 10.1016/S0092-8674(02)00718-3 · doi:10.1016/s0092-8674(02)00718-3
  16. Klein, 1996, A new family of DNA binding proteins includes putative transcriptional regulators of the Antirrhinum majus floral meristem identity gene SQUAMOSA, Mol. Gen. Genet., 250, 7
  17. Knight, 2001, A role for the RNase III enzyme DCR-1 in RNA interference and germ line development in Caenorhabditis elegans, Science, 293, 2269, 10.1126/science.1062039 · DOI · Paper page
  18. Lagos-Quintana, 2002, Identification of tissue-specific microRNAs from mouse, Curr. Biol., 12, 735, 10.1016/S0960-9822(02)00809-6 · DOI · Paper page
  19. Lai, 2002, MicroRNAs are complementary to 3′UTR motifs that mediate negative post-transcriptional regulation, Nat. Genet., 30, 363, 10.1038/ng865 · DOI · Paper page
  20. Lau, 2001, An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans, Science, 294, 858, 10.1126/science.1065062 · DOI · Paper page
  21. Lee, 2001, An extensive class of small RNAs in Caenorhabditis elegans, Science, 294, 862, 10.1126/science.1065329 · DOI · Paper page
  22. Liscum, 2002, Genetics of Aux/IAA and ARF action in plant growth and development, Plant Mol. Biol., 49, 387, 10.1023/A:1015255030047 · DOI · Paper page
  23. Llave, 2002, Endogenous and silencing-associated small RNAs in plants, Plant Cell, 14, 1605, 10.1105/tpc.003210 · DOI · Paper page
  24. Matzke, 2001, RNA-based silencing strategies in plants, Curr. Opin. Genet. Dev., 11, 221, 10.1016/S0959-437X(00)00183-0 · doi:10.1016/s0959-437x(00)00183-0
  25. McConnell, 2001, Role of PHABULOSA and PHAVOLUTA in determining radial patterning in shoots, Nature, 411, 709, 10.1038/35079635 · DOI · Paper page
  26. McManus, 2002, Gene silencing using micro-RNA designed hairpins, RNA, 8, 842, 10.1017/S1355838202024032 · DOI · Paper page
  27. Moss, 1997, The cold shock domain protein LIN-28 controls developmental timing in C. elegans and is regulated by the lin-4 RNA, Cell, 88, 637, 10.1016/S0092-8674(00)81906-6 · DOI · Paper page
  28. Peng, 1997, The Arabidopsis GAI gene defines a signaling pathway that negatively regulates gibberellin responses, Genes Dev., 11, 3194, 10.1101/gad.11.23.3194 · DOI · Paper page
  29. Ray, 1996, SHORT INTEGUMENT (SIN1), a gene required for ovule development in Arabidopsis, also controls flowering time, Development, 122, 2631, 10.1242/dev.122.9.2631 · DOI
  30. Ray, 1996, Maternal effects of the short integument mutation on embryo development, Dev. Biol., 180, 365, 10.1006/dbio.1996.0309 · DOI
  31. Reinhart, 2000, The 21 nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans, Nature, 403, 901, 10.1038/35002607 · DOI · Paper page
  32. Reinhart, 2002, MicroRNAs in plants, Genes Dev., 16, 1616, 10.1101/gad.1004402 · DOI · Paper page
  33. Riechmann, 2000, Arabidopsis transcription factors, Science, 290, 2105, 10.1126/science.290.5499.2105 · DOI · Paper page
  34. Robinson-Beers, 1992, Ovule development in wild-type Arabidopsis and two female-sterile mutants, Plant Cell, 4, 1237, 10.1105/tpc.4.10.1237 · DOI · Paper page
  35. Rogg, 2001, Auxin signaling, Dev. Cell, 1, 595, 10.1016/S1534-5807(01)00077-6 · DOI
  36. Silverstone, 1998, The Arabidopsis RGA gene encodes a transcriptional regulator repressing the gibberellin signal transduction pathway, Plant Cell, 10, 155, 10.1105/tpc.10.2.155 · DOI · Paper page
  37. Slack, 2000, The lin-41 RBCC gene acts in the C. elegans heterochronic pathway between the let-7 regulatory RNA and the LIN-29 transcription factor, Mol. Cell, 5, 659, 10.1016/S1097-2765(00)80245-2 · DOI · Paper page
  38. Ulmasov, 1999, Dimerization and DNA binding of auxin response factors, Plant J., 19, 309, 10.1046/j.1365-313X.1999.00538.x · DOI · Paper page
  39. Yeh, 2001, Computational inference of homologous gene structures in the human genome, Genome Res., 11, 803, 10.1101/gr.175701 · DOI · Paper page
  40. Yu, 2002, A draft sequence of the rice genome (Oryza sativa L. ssp. indica), Science, 296, 79, 10.1126/science.1068037 · DOI · Paper page

Cited by

See all 2,283

Metadata

Authors
Rhoades, M. W., Reinhart, B. J., Lim, L. P., Burge, C. B., Bartel, B., & Bartel, D. P.
Venue
Cell
Publisher
Elsevier BV
Published
2002-08
Volume
110
Issue
4
Pages
513-520
ISSN
0092-8674 (ISSN-L)
DOI
10.1016/s0092-8674(02)00863-2
OpenAlex
W1967543716
Cited by
2,283
References
9
FWCI
120.22
Type
journal article
Language
en
Open access
bronze
Licence

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review

How to cite

Cite CoChat for the checks on this page, and the paper for its own findings.

This page
CoChat. (2026). Citation check: Prediction of Plant MicroRNA Targets. https://app.cochat.ai/papers/10.1016/s0092-8674(02)00863-2
The paper
Rhoades, M. W., Reinhart, B. J., Lim, L. P., Burge, C. B., Bartel, B., & Bartel, D. P. (2002). Prediction of Plant MicroRNA Targets. Cell. https://doi.org/10.1016/s0092-8674(02)00863-2

Data sources

Bibliographic data: Semantic Scholar, OpenAlex, Crossref.

Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).

Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.