Cited by 1,119Mitochondrial Function and PathologyAdipose Tissue and MetabolismMetabolism, Diabetes, and Cancer

Regulation of mitochondrial biogenesis

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Jornayvaz, François R., Shulman, Gerald I.·2010·Essays in Biochemistry

Abstract

Although it is well established that physical activity increases mitochondrial content in muscle, the molecular mechanisms underlying this process have only recently been elucidated. Mitochondrial dysfunction is an important component of different diseases associated with aging, such as Type 2 diabetes and Alzheimer's disease. PGC-1alpha (peroxisome-proliferator-activated receptor gamma co-activator-1alpha) is a co-transcriptional regulation factor that induces mitochondrial biogenesis by activating different transcription factors, including nuclear respiratory factor 1 and nuclear respiratory factor 2, which activate mitochondrial transcription factor A. The latter drives transcription and replication of mitochondrial DNA. PGC-1alpha itself is regulated by several different key factors involved in mitochondrial biogenesis, which will be reviewed in this chapter. Of those, AMPK (AMP-activated protein kinase) is of major importance. AMPK acts as an energy sensor of the cell and works as a key regulator of mitochondrial biogenesis. AMPK activity has been shown to decrease with age, which may contribute to decreased mitochondrial biogenesis and function with aging. Given the potentially important role of mitochondrial dysfunction in the pathogenesis of numerous diseases and in the process of aging, understanding the molecular mechanisms regulating mitochondrial biogenesis and function may provide potentially important novel therapeutic targets.

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  • Several proteins needed for mitochondrial biogenesis are encoded in nuclear DNA and synthesized by cytosolic ribosomes before they can be imported into the mitochondria.

    “Moreover, several proteins needed for mitochondrial biogenesis are encoded in nuclear DNA and synthesized by cytosolic ribosomes before they can be imported into the mitochondria (Jornayvaz and Shulman, 2010; Perry and Hawley, 2018).”

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Research works printed but not linked: 58

  1. [1]Baker MJ Frazier AE Gulbis JM Ryan MT Mitochondrial protein-import machinery: correlating structure with function Trends Cell Biol 2007 17 456 464 17825565
  2. [2]Chan DC Mitochondria: dynamic organelles in disease, aging, and development Cell 2006 125 1241 1252 16814712
  3. [3]Paul MH Sperling E Cyclophorase system. XXIII. Correlation of cyclophorase activity and mitochondrial density in striated muscle Proc. Soc. Exp. Biol. Med 1952 79 352 354 14920424
  4. [5]Gollnick PD Armstrong RB Saubert CW 4th Piehl K Saltin B Enzyme activity and fiber composition in skeletal muscle of untrained and trained men J. Appl. Physiol 1972 33 312 319 4403464
  5. [6]Hoppeler H Luthi P Claassen H Weibel ER Howald H The ultrastructure of the normal human skeletal muscle. A morphometric analysis on untrained, men, women and well-trained orienteers Pflugers Arch 1973 344 217 232 4797912
  6. [7]Fink WJ Costill DL Pollock ML Submaximal and maximal working capacity of elite distance runners. Part II. Muscle fiber composition and enzyme activities Ann. NY Acad. Sci 1977 301 323 327 270925
  7. [8]Puigserver P Wu Z Park CW Graves R Wright M Spiegelman BM A cold-inducible coactivator of nuclear receptors linked to adaptive thermogenesis Cell 1998 92 829 839 9529258
  8. [9]Irrcher I Adhihetty PJ Sheehan T Joseph AM Hood DA PPARγ coactivator-1α expression during thyroid hormone- and contractile activity-induced mitochondrial adaptations Am. J. Physiol. Cell. Physiol 2003 284 C1669 C1677 12734114
  9. [10]Virbasius JV Scarpulla RC Activation of the human mitochondrial transcription factor A gene by nuclear respiratory factors: a potential regulatory link between nuclear and mitochondrial gene expression in organelle biogenesis Proc. Natl. Acad. Sci. U.S.A 1994 91 1309 1313 8108407 PMC43147
  10. [11]Wu Z Puigserver P Andersson U Zhang C Adelmant G Mootha V Troy A Cinti S Lowell B Scarpulla RC Spiegelman BM Mechanisms controlling mitochondrial biogenesis and respiration through the thermogenic coactivator PGC-1 Cell 1999 98 115 124 10412986
  11. [13]Ventura-Clapier R Garnier A Veksler V Transcriptional control of mitochondrial biogenesis: the central role of PGC-1α Cardiovasc. Res 2008 79 208 217 18430751
  12. [14]Giguere V Transcriptional control of energy homeostasis by the estrogen-related receptors Endocr. Rev 2008 29 677 696 18664618
  13. [15]Meirhaeghe A Crowley V Lenaghan C Lelliott C Green K Stewart A Hart K Schinner S Sethi JK Yeo G Characterization of the human, mouse and rat PGC1β (peroxisome-proliferator-activated receptor-γ co-activator 1β) gene in vitro and in vivo Biochem. J 2003 373 155 165 12678921 PMC1223480
  14. [16]Hardie DG AMP-activated/SNF1 protein kinases: conserved guardians of cellular energy Nat. Rev. Mol. Cell Biol 2007 8 774 785 17712357
  15. [17]Bergeron R Ren JM Cadman KS Moore IK Perret P Pypaert M Young LH Semenkovich CF Shulman GI Chronic activation of AMP kinase results in NRF-1 activation and mitochondrial biogenesis Am. J. Physiol. Endocrinol. Metab 2001 281 E1340 E1346 11701451
  16. [19]Winder WW Holmes BF Rubink DS Jensen EB Chen M Holloszy JO Activation of AMP-activated protein kinase increases mitochondrial enzymes in skeletal muscle J. Appl. Physiol 2000 88 2219 2226 10846039
  17. [20]Reznick RM Zong H Li J Morino K Moore IK Yu HJ Liu ZX Dong J Mustard KJ Hawley SA Aging-associated reductions in AMP-activated protein kinase activity and mitochondrial biogenesis Cell. Metab 2007 5 151 156 17276357 PMC1885964
  18. [22]Wu H Naya FJ McKinsey TA Mercer B Shelton JM Chin ER Simard AR Michel RN Bassel-Duby R Olson EN Williams RS MEF2 responds to multiple calcium-regulated signals in the control of skeletal muscle fiber type EMBO J 2000 19 1963 1973 10790363 PMC305686
  19. [23]Wu H Kanatous SB Thurmond FA Gallardo T Isotani E Bassel-Duby R Williams RS Regulation of mitochondrial biogenesis in skeletal muscle by CaMK Science 2002 296 349 352 11951046
  20. [24]Akimoto T Ribar TJ Williams RS Yan Z Skeletal muscle adaptation in response to voluntary running in Ca2+/calmodulin-dependent protein kinase IV-deficient mice Am. J. Physiol. Cell. Physiol 2004 287 C1311 C1319 15229108
  21. [26]Nisoli E Clementi E Paolucci C Cozzi V Tonello C Sciorati C Bracale R Valerio A Francolini M Moncada S Carruba MO Mitochondrial biogenesis in mammals: the role of endogenous nitric oxide Science 2003 299 896 899 12574632
  22. Pacholec M Bleasdale JE Chrunyk B Cunningham D Flynn D Garofalo RS Griffith D Griffor M Loulakis P Pabst B SRT1720, SRT2183, SRT1460, and resveratrol are not direct activators of SIRT1 J. Biol. Chem 2010 285 8340 8351 20061378 PMC2832984
  23. [29]Wu Z Huang X Feng Y Handschin C Gullicksen PS Bare O Labow M Spiegelman B Stevenson SC Transducer of regulated CREB-binding proteins (TORCs) induce PGC-1α transcription and mitochondrial biogenesis in muscle cells Proc. Natl. Acad. Sci. U.S.A 2006 103 14379 14384 16980408 PMC1569674
  24. [30]Chin ER Olson EN Richardson JA Yang Q Humphries C Shelton JM Wu H Zhu W Bassel-Duby R Williams RS A calcineurin-dependent transcriptional pathway controls skeletal muscle fiber type Genes Dev 1998 12 2499 2509 9716403 PMC317085
  25. [31]Ryder JW Bassel-Duby R Olson EN Zierath JR Skeletal muscle reprogramming by activation of calcineurin improves insulin action on metabolic pathways J. Biol. Chem 2003 278 44298 44304 12941959
  26. [32]Schaeffer PJ Wende AR Magee CJ Neilson JR Leone TC Chen F Kelly DP Calcineurin and calcium/calmodulin-dependent protein kinase activate distinct metabolic gene regulatory programs in cardiac muscle J. Biol. Chem 2004 279 39593 39603 15262994
  27. [33]Terada S Nakagawa H Nakamura Y Muraoka I Calcineurin is not involved in some mitochondrial enzyme adaptations to endurance exercise training in rat skeletal muscle Eur. J. Appl. Physiol 2003 90 210 217 12856186
  28. [34]Zetser A Gredinger E Bengal E p38 mitogen-activated protein kinase pathway promotes skeletal muscle differentiation. Participation of the Mef2c transcription factor J. Biol. Chem 1999 274 5193 5200 9988769
  29. [35]Nader GA Esser KA Intracellular signaling specificity in skeletal muscle in response to different modes of exercise J. Appl. Physiol 2001 90 1936 1942 11299288
  30. [36]Boppart MD Asp S Wojtaszewski JF Fielding RA Mohr T Goodyear LJ Marathon running transiently increases c-Jun NH2-terminal kinase and p38 activities in human skeletal muscle J. Physiol 2000 526 663 669 10922016 PMC2270029
  31. [37]Akimoto T Pohnert SC Li P Zhang M Gumbs C Rosenberg PB Williams RS Yan Z Exercise stimulates Pgc-1α transcription in skeletal muscle through activation of the p38 MAPK pathway J. Biol. Chem 2005 280 19587 19593 15767263
  32. [38]Wright DC Han DH Garcia-Roves PM Geiger PC Jones TE Holloszy JO Exercise-induced mitochondrial biogenesis begins before the increase in muscle PGC-1α expression J. Biol. Chem 2007 282 194 199 17099248
  33. [39]White R Morganstein D Christian M Seth A Herzog B Parker MG Role of RIP140 in metabolic tissues: connections to disease FEBS Lett 2008 582 39 45 18023280
  34. [40]Seth A Steel JH Nichol D Pocock V Kumaran MK Fritah A Mobberley M Ryder TA Rowlerson A Scott J The transcriptional corepressor RIP140 regulates oxidative metabolism in skeletal muscle Cell Metab 2007 6 236 245 17767910 PMC2680991
  35. [41]Leonardsson G Steel JH Christian M Pocock V Milligan S Bell J So PW Medina-Gomez G Vidal-Puig A White R Parker MG Nuclear receptor corepressor RIP140 regulates fat accumulation Proc. Natl. Acad. Sci. U.S.A 2004 101 8437 8442 15155905 PMC420412
  36. [42]Christian M Kiskinis E Debevec D Leonardsson G White R Parker MG RIP140-targeted repression of gene expression in adipocytes Mol. Cell. Biol 2005 25 9383 9391 16227589 PMC1265803
  37. [43]Pile LA Spellman PT Katzenberger RJ Wassarman DA The SIN3 deacetylase complex represses genes encoding mitochondrial proteins: implications for the regulation of energy metabolism J. Biol. Chem 2003 278 37840 37848 12865422
  38. [45]Wallace DC Mitochondrial diseases in man and mouse Science 1999 283 1482 1488 10066162
  39. [46]Petersen KF Befroy D Dufour S Dziura J Ariyan C Rothman DL DiPietro L Cline GW Shulman GI Mitochondrial dysfunction in the elderly: possible role in insulin resistance Science 2003 300 1140 1142 12750520 PMC3004429
  40. [48]Boumezbeur F Mason GF de Graaf RA Behar KL Cline GW Shulman GI Rothman DL Petersen KF Altered brain mitochondrial metabolism in healthy aging as assessed by in vivo magnetic resonance spectroscopy J. Cereb. Blood Flow Metab 2010 30 211 221 19794401 PMC2949111
  41. [49]Petersen KF Dufour S Befroy D Garcia R Shulman GI Impaired mitochondrial activity in the insulin-resistant offspring of patients with type 2 diabetes N. Engl. J. Med 2004 350 664 671 14960743 PMC2995502
  42. [52]Patti ME Butte AJ Crunkhorn S Cusi K Berria R Kashyap S Miyazaki Y Kohane I Costello M Saccone R Coordinated reduction of genes of oxidative metabolism in humans with insulin resistance and diabetes: Potential role of PGC1 and NRF1 Proc. Natl. Acad. Sci. U.S.A 2003 100 8466 8471 12832613 PMC166252
  43. [53]Mootha VK Lindgren CM Eriksson KF Subramanian A Sihag S Lehar J Puigserver P Carlsson E Ridderstrale M Laurila E PGC-1α-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes Nat. Genet 2003 34 267 273 12808457
  44. [54]Petersen KF Dufour S Shulman GI Decreased insulin-stimulated ATP synthesis and phosphate transport in muscle of insulin-resistant offspring of type 2 diabetic parents PLoS Med 2005 2 e233 16089501 PMC1184227
  45. [56]Fujisawa K Nishikawa T Kukidome D Imoto K Yamashiro T Motoshima H Matsumura T Araki E TZDs reduce mitochondrial ROS production and enhance mitochondrial biogenesis Biochem. Biophys. Res. Commun 2009 379 43 48 19084501
  46. [57]Mensink M Hesselink MK Russell AP Schaart G Sels JP Schrauwen P Improved skeletal muscle oxidative enzyme activity and restoration of PGC-1α and PPARβ/δ gene expression upon rosiglitazone treatment in obese patients with type 2 diabetes mellitus Int. J. Obes. (Lond) 2007 31 1302 1310 17310221
  47. [58]Civitarese AE Ukropcova B Carling S Hulver M DeFronzo RA Mandarino L Ravussin E Smith SR Role of adiponectin in human skeletal muscle bioenergetics Cell Metab 2006 4 75 87 16814734 PMC2671025
  48. [59]Bandyopadhyay GK Yu JG Ofrecio J Olefsky JM Increased malonyl-CoA levels in muscle from obese and type 2 diabetic subjects lead to decreased fatty acid oxidation and increased lipogenesis; thiazolidinedione treatment reverses these defects Diabetes 2006 55 2277 2285 16873691
  49. [60]Suwa M Egashira T Nakano H Sasaki H Kumagai S Metformin increases the PGC-1α protein and oxidative enzyme activities possibly via AMPK phosphorylation in skeletal muscle in vivo J. Appl. Physiol 2006 101 1685 1692 16902066
  50. [61]Weindruch R Sohal RS Seminars in medicine of the Beth Israel Deaconess Medical Center. Caloric intake and aging N. Engl. J. Med 1997 337 986 994 9309105 PMC2851235
  51. [64]Bevilacqua L Ramsey JJ Hagopian K Weindruch R Harper ME Effects of shortand medium-term calorie restriction on muscle mitochondrial proton leak and reactive oxygen species production Am. J. Physiol. Endocrinol. Metab 2004 286 E852 E861 14736705
  52. [65]Civitarese AE Carling S Heilbronn LK Hulver MH Ukropcova B Deutsch WA Smith SR Ravussin E Calorie restriction increases muscle mitochondrial biogenesis in healthy humans PLoS Med 2007 4 e76 17341128 PMC1808482
  53. [67]Haigis MC Guarente LP Mammalian sirtuins: emerging roles in physiology, aging, and calorie restriction Genes Dev 2006 20 2913 2921 17079682
  54. [68]Kahn BB Alquier T Carling D Hardie DG AMP-activated protein kinase: ancient energy gauge provides clues to modern understanding of metabolism Cell Metab 2005 1 15 25 16054041
  55. [69]de Lange P Farina P Moreno M Ragni M Lombardi A Silvestri E Burrone L Lanni A Goglia F Sequential changes in the signal transduction responses of skeletal muscle following food deprivation FASEB J 2006 20 2579 2581 17065218
  56. [70]Gonzalez AA Kumar R Mulligan JD Davis AJ Weindruch R Saupe KW Metabolic adaptations to fasting and chronic caloric restriction in heart, muscle, and liver do not include changes in AMPK activity Am. J. Physiol. Endocrinol. Metab 2004 287 E1032 E1037 15251868
  57. [71]To K Yamaza H Komatsu T Hayashida T Hayashi H Toyama H Chiba T Higami Y Shimokawa I Down-regulation of AMP-activated protein kinase by calorie restriction in rat liver Exp. Gerontol 2007 42 1063 1071 17709221
  58. [72]Shinmura K Tamaki K Bolli R Short-term caloric restriction improves ischemic tolerance independent of opening of ATP-sensitive K+ channels in both young and aged hearts J. Mol. Cell. Cardiol 2005 39 285 296 15878170

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Authors
Jornayvaz, F. R., & Shulman, G. I.
Affiliations
  • Yale University (US)
  • Howard Hughes Medical Institute (US)
Corresponding author
Shulman, Gerald I.
Venue
Essays in Biochemistry
Published
2010-06-14
Volume
47
Pages
69-84
ISSN
  • 0071-1365 (ISSN-L)
  • 1744-1358
OpenAlex
W2110374590
Cited by
1,119
References
15
Citations by year
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FWCI
1.01
Type
journal article
Language
en
Open access
Locations
  • Essays in Biochemistry (publishedVersion)
  • PubMed (publishedVersion)
  • Europe PMC (PubMed Central) (acceptedVersion)
  • PubMed Central (acceptedVersion)
Funders
  • Howard Hughes Medical Institute
  • National Institute of Diabetes and Digestive and Kidney Diseases (R01DK040936, U24DK059635)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Mitochondrial Function and Pathology
  • Health Sciences › Medicine › Physiology › Adipose Tissue and Metabolism
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Metabolism, Diabetes, and Cancer
Keywords
mitochondrial biogenesis, PGC-1α, AMPK, NRF1, TFAM, mitochondrial DNA replication, mitochondrial dysfunction, aging, type 2 diabetes, Alzheimer's disease, physical activity, skeletal muscle, energy sensing
MeSH terms
Organelle Biogenesis, DNA, Mitochondrial, Mitochondria, Models, Biological, AMP-Activated Protein Kinases

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