Cited by 397Gut microbiota and healthMicrobial Metabolites in Food BiotechnologyFood composition and properties

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Gut microbiota richness promotes its stability upon increased dietary fibre intake in healthy adults

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Tap, Julien, Furet, Jean‐Pierre, Bensaada, Martine, Philippe, Catherine, Roth, Hubert, Rabot, Sylvie, Lakhdari, Omar, Lombard, Vincent, Henrissat, Bernard, Corthier, Gérard, Fontaine, Eric, Doré, Joël, Leclerc, Marion·2015·Environmental Microbiology

DOI 10.1111/1462-2920.13006

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Abstract

Summary: Gut microbiota richness and stability are important parameters in host–microbe symbiosis. Diet modification, notably using dietary fibres, might be a way to restore a high richness and stability in the gut microbiota. In this work, during a 6‐week nutritional trial, 19 healthy adults consumed a basal diet supplemented with 10 or 40 g dietary fibre per day for 5 days, followed by 15‐day washout periods. Fecal samples were analysed by a combination of 16S r RNA gene pyrosequencing, intestinal cell genotoxicity assay, metatranscriptomics sequencing approach and short‐chain fatty analysis. This short‐term change in the dietary fibre level did not have the same impact for all individuals but remained significant within each individual gut microbiota at genus level. Higher microbiota richness was associated with higher microbiota stability upon increased dietary fibre intake. Increasing fibre modulated the expression of numerous microbiota metabolic pathways such as glycan metabolism, with genes encoding carbohydrate‐active enzymes active on fibre or host glycans. High microbial richness was also associated with high proportions of Prevotella and Coprococcus species and high levels of caproate and valerate. This study provides new insights on the role of gut microbial richness in healthy adults upon dietary changes and host microbes' interaction

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
Altschul, S. (1997) · Nucleic Acids Research · doi:10.1093/nar/25.17.3389 · Cited by 73,302
A human gut microbial gene catalogue established by metagenomic sequencing
MetaHIT Consortium, Qin, J., Li, R., Raes, J., Arumugam, M., Burgdorf, K. S., Manichanh, C., Nielsen, T., Pons, N., Levenez, F., et al. (2010) · Nature · doi:10.1038/nature08821 · Cited by 11,624
Self-citation
Diet rapidly and reproducibly alters the human gut microbiome
David, L. A., Maurice, C. F., Carmody, R. N., Gootenberg, D. B., Button, J. E., Wolfe, B. E., Ling, A. V., Devlin, A. S., Varma, Y., Fischbach, M. A., et al. (2014) · Nature · doi:10.1038/nature12820 · Cited by 10,100
Dietary Modulation of the Human Colonic Microbiota: Introducing the Concept of Prebiotics
Gibson, G. R., & Roberfroid, M. B. (1995) · Journal of Nutrition · doi:10.1093/jn/125.6.1401 · Cited by 7,659
Enterotypes of the human gut microbiome
MetaHIT Consortium (additional members), Arumugam, M., Raes, J., Pelletier, E., Le Paslier, D., Yamada, T., Mende, D. R., Fernandes, G. R., Tap, J., Bruls, T., et al. (2011) · Nature · doi:10.1038/nature09944 · Cited by 7,548
Self-citation
Linking long-term dietary patterns with gut microbial enterotypes
Wu, G. D., Chen, J., Hoffmann, C., Bittinger, K., Chen, Y.-Y., Keilbaugh, S. A., Bewtra, M., Knights, D., Walters, W. A., Knight, R., et al. (2011) · Science · doi:10.1126/science.1208344 · Cited by 6,513
Obesity alters gut microbial ecology
Ley, R. E., Bäckhed, F., Turnbaugh, P., Lozupone, C. A., Knight, R. D., & Gordon, J. I. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0504978102 · Cited by 6,176
The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics
Cantarel, B. L., Coutinho, P. M., Rancurel, C., Bernard, T., Lombard, V., & Henrissat, B. (2008) · Nucleic Acids Research · doi:10.1093/nar/gkn663 · Cited by 6,108
Self-citation
Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa
De Filippo, C., Cavalieri, D., Di Paola, M., Ramazzotti, M., Poullet, J. B., Massart, S., Collini, S., Pieraccini, G., & Lionetti, P. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1005963107 · Cited by 5,579
CAP3: A DNA Sequence Assembly Program
Huang, X., & Madan, A. (1999) · Genome Research · doi:10.1101/gr.9.9.868 · Cited by 5,261

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Authors: Tap, J., Furet, J., Bensaada, M., Philippe, C., Roth, H., Rabot, S., Lakhdari, O., Lombard, V., Henrissat, B., Corthier, G., Fontaine, E., Doré, J., & Leclerc, M.
Affiliations: Microbiologie de l’alimentation au service de la santé (FR)
Inserm (FR)
Centre National de la Recherche Scientifique (FR)
INRA Micalis Institute UMR1319 Jouy‐en‐Josas 78350 France
Corresponding author: Leclerc, Marion
ORCID: Tap, Julien
Philippe, Catherine
Roth, Hubert
Rabot, Sylvie
Lakhdari, Omar
Lombard, Vincent
Henrissat, Bernard
Fontaine, Eric
Leclerc, Marion
Venue: Environmental Microbiology
Publisher: Wiley
Published: 2015-09-03
Volume: 17
Issue: 12
Pages: 4954-4964
ISSN: 1462-2912 (ISSN-L)
1462-2920
DOI: 10.1111/1462-2920.13006
OpenAlex: W1790787093
Cited by: 397
References: 51
Citations by year: 2026: 14 · 2025: 33 · 2024: 34 · 2023: 28 · 2022: 62 · 2021: 53 · 2020: 54 · 2019: 46 · 2018: 24 · 2017: 26 · 2016: 21
FWCI: 10.27
Type: journal article
Language: en
Open access: hybrid
doi.org
Licence: cc-by-nc-nd
creativecommons.org/licenses/by-nc-nd/4.0/ (vor)
Locations: Environmental Microbiology (publishedVersion, cc-by-nc-nd)
PubMed (publishedVersion)
HAL (submittedVersion, cc-by-nc-nd)
Funders: French National Agency for Research (ANR/DEDD/PNRA/PROJ/200206-01-01)
Topics: Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
Health Sciences › Nursing › Nutrition and Dietetics › Microbial Metabolites in Food Biotechnology
Health Sciences › Nursing › Nutrition and Dietetics › Food composition and properties
Keywords: microbiome stability, dietary fiber, short-chain fatty acids, host-microbe symbiosis, carbohydrate-active enzymes, glycan metabolism, Prevotella, Coprococcus, caproate, valerate, metatranscriptomics, healthy adults
MeSH terms: Eubacteriales, Gastrointestinal Microbiome, Adult, Diet, Dietary Fiber, Fatty Acids, Feces, Female, Humans, Male, RNA, Ribosomal, 16S, Symbiosis, Prevotella, Dietary Supplements, Young Adult

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Gut microbiota richness promotes its stability upon increased dietary fibre intake in healthy adults

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