The role of the gut microbiome in predicting response to diet and the development of precision nutrition models. Part II: results

An obesity-associated gut microbiome with increased capacity for energy harvest

Turnbaugh, P. J., Ley, R. E., Mahowald, M. A., Magrini, V., Mardis, E. R., & Gordon, J. I. (2006) · Nature · doi:10.1038/nature05414 · Cited by 12,444 · see citing works

Diet rapidly and reproducibly alters the human gut microbiome

David, L. A., Maurice, C. F., Carmody, R. N., Gootenberg, D. B., Button, J. E., Wolfe, B. E., Ling, A. V., Devlin, A. S., Varma, Y., Fischbach, M. A., et al. (2014) · Nature · doi:10.1038/nature12820 · Cited by 10,100 · see citing works

Human gut microbiome viewed across age and geography

Yatsunenko, T., Rey, F. E., Manary, M. J., Trehan, I., Dominguez-Bello, M. G., Contreras, M., Magris, M., Hidalgo, G., Baldassano, R. N., Anokhin, A. P., et al. (2012) · Nature · doi:10.1038/nature11053 · Cited by 7,815 · see citing works

Linking long-term dietary patterns with gut microbial enterotypes

Wu, G. D., Chen, J., Hoffmann, C., Bittinger, K., Chen, Y.-Y., Keilbaugh, S. A., Bewtra, M., Knights, D., Walters, W. A., Knight, R., et al. (2011) · Science · doi:10.1126/science.1208344 · Cited by 6,513 · see citing works

The human microbiome project

Turnbaugh, P. J., Ley, R. E., Hamady, M., Fraser-Liggett, C. M., Knight, R., & Gordon, J. I. (2007) · Nature · doi:10.1038/nature06244 · Cited by 6,091 · see citing works

Gut microbiome influences efficacy of PD-1-based immunotherapy against epithelial tumors

Routy, B., Le Chatelier, E., Derosa, L., Duong, C. P. M., Alou, M. T., Daillère, R., Fluckiger, A., Messaoudene, M., Rauber, C., Roberti, M. P., et al. (2018) · Science · doi:10.1126/science.aan3706 · Cited by 5,671 · see citing works

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

De Filippo, C., Cavalieri, D., Di Paola, M., Ramazzotti, M., Poullet, J. B., Massart, S., Collini, S., Pieraccini, G., & Lionetti, P. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1005963107 · Cited by 5,579 · see citing works

Host-gut microbiota metabolic interactions

Nicholson, J. K., Holmes, E., Kinross, J., Burcelin, R., Gibson, G., Jia, W., & Pettersson, S. (2012) · Science · doi:10.1126/science.1223813 · Cited by 4,760 · see citing works

Richness of human gut microbiome correlates with metabolic markers

Le Chatelier, E., Nielsen, T., Qin, J., Prifti, E., Hildebrand, F., Falony, G., Almeida, M., Arumugam, M., Batto, J.-M., Kennedy, S., et al. (2013) · Nature · doi:10.1038/nature12506 · Cited by 4,662 · see citing works

Effect of In Utero and Early-Life Conditions on Adult Health and Disease

Gluckman, P. D., Hanson, M. A., Cooper, C., & Thornburg, K. L. (2008) · New England Journal of Medicine · doi:10.1056/nejmra0708473 · Cited by 3,898 · see citing works

Epigenetic differences arise during the lifetime of monozygotic twins

Fraga, M. F., Ballestar, E., Paz, M. F., Ropero, S., Setien, F., Ballestar, M. L., Heine-Suñer, D., Cigudosa, J. C., Urioste, M., Benitez, J., et al. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0500398102 · Cited by 3,602 · see citing works

Bacterial Community Variation in Human Body Habitats Across Space and Time

Costello, E. K., Lauber, C. L., Hamady, M., Fierer, N., Gordon, J. I., & Knight, R. (2009) · Science · doi:10.1126/science.1177486 · Cited by 3,231 · see citing works

Human Genetics Shape the Gut Microbiome

Goodrich, J. K., Waters, J. L., Poole, A. C., Sutter, J. L., Koren, O., Blekhman, R., Beaumont, M., Van Treuren, W., Knight, R., Bell, J. T., et al. (2014) · Cell · doi:10.1016/j.cell.2014.09.053 · Cited by 3,164 · see citing works

Evidence-based interventions for improvement of maternal and child nutrition: what can be done and at what cost?

Bhutta, Z. A., Das, J. K., Rizvi, A., Gaffey, M. F., Walker, N., Horton, S., Webb, P., Lartey, A., & Black, R. E. (2013) · The Lancet · doi:10.1016/s0140-6736(13)60996-4 · Cited by 3,093 · see citing works

Persistent epigenetic differences associated with prenatal exposure to famine in humans

Heijmans, B. T., Tobi, E. W., Stein, A. D., Putter, H., Blauw, G. J., Susser, E. S., Slagboom, P. E., & Lumey, L. H. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0806560105 · Cited by 3,082 · see citing works

Personalized nutrition by prediction of glycemic responses

Zeevi, D., Korem, T., Zmora, N., Israeli, D., Rothschild, D., Weinberger, A., Ben-Yacov, O., Lador, D., Avnit-Sagi, T., Lotan-Pompan, M., et al. (2015) · Cell · doi:10.1016/j.cell.2015.11.001 · Cited by 2,929 · see citing works

Environment dominates over host genetics in shaping human gut microbiota

Rothschild, D., Weissbrod, O., Barkan, E., Kurilshikov, A., Korem, T., Zeevi, D., Costea, P. I., Godneva, A., Kalka, I. N., Bar, N., et al. (2018) · Nature · doi:10.1038/nature25973 · Cited by 2,859 · see citing works

Review article: the role of butyrate on colonic function

HAMER, H. M., JONKERS, D., VENEMA, K., VANHOUTVIN, S., TROOST, F. J., & BRUMMER, R. ‐. (2008) · Alimentary Pharmacology & Therapeutics · doi:10.1111/j.1365-2036.2007.03562.x · Cited by 2,721 · see citing works

Environmental epigenomics and disease susceptibility

Jirtle, R. L., & Skinner, M. K. (2007) · Nature Reviews Genetics · doi:10.1038/nrg2045 · Cited by 2,492 · see citing works

Gut bacteria selectively promoted by dietary fibers alleviate type 2 diabetes

Zhao, L., Zhang, F., Ding, X., Wu, G., Lam, Y. Y., Wang, X., Fu, H., Xue, X., Lu, C., Ma, J., et al. (2018) · Science · doi:10.1126/science.aao5774 · Cited by 2,304 · see citing works

Diet–microbiota interactions as moderators of human metabolism

Sonnenburg, J. L., & Bäckhed, F. (2016) · Nature · doi:10.1038/nature18846 · Cited by 2,257 · see citing works

Factors influencing the composition of the intestinal microbiota in early infancy

Penders, J., Thijs, C., Vink, C., Stelma, F. F., Snijders, B., Kummeling, I., van den Brandt, P. A., & Stobberingh, E. E. (2006) · PEDIATRICS · doi:10.1542/peds.2005-2824 · Cited by 2,232 · see citing works

Artificial sweeteners induce glucose intolerance by altering the gut microbiota

Suez, J., Korem, T., Zeevi, D., Zilberman-Schapira, G., Thaiss, C. A., Maza, O., Israeli, D., Zmora, N., Gilad, S., Weinberger, A., et al. (2014) · Nature · doi:10.1038/nature13793 · Cited by 2,067 · cited 2× · see citing works

The Long-Term Stability of the Human Gut Microbiota

Faith, J. J., Guruge, J. L., Charbonneau, M., Subramanian, S., Seedorf, H., Goodman, A. L., Clemente, J. C., Knight, R., Heath, A. C., Leibel, R. L., et al. (2013) · Science · doi:10.1126/science.1237439 · Cited by 2,058 · see citing works

Variations in the Prevalence of Obesity Among European Countries, and a Consideration of Possible Causes

Blundell, J. E., Baker, J. L., Boyland, E. J., Blaak, E. E., Charzewska, J., Henauw, S. D., Frühbeck, G., González‐Gross, M., Hebebrand, J., Holm, L., et al. (2017) · Obesity Facts · doi:10.1159/000455952 · Cited by 1,980 · see citing works

<i>Akkermansia muciniphila</i> and improved metabolic health during a dietary intervention in obesity: relationship with gut microbiome richness and ecology

Dao, M. C., Everard, A., Aron-Wisnewsky, J., Sokolovska, N., Prifti, E., Verger, E. O., Kayser, B. D., Levenez, F., Chilloux, J., Hoyles, L., et al. (2016) · Gut · doi:10.1136/gutjnl-2014-308778 · Cited by 1,931 · see citing works

Dietary intervention impact on gut microbial gene richness

Cotillard, A., Kennedy, S. P., Kong, L. C., Prifti, E., Pons, N., Le Chatelier, E., Almeida, M., Quinquis, B., Levenez, F., Galleron, N., et al. (2013) · Nature · doi:10.1038/nature12480 · Cited by 1,832 · see citing works

Dietary Fiber-Induced Improvement in Glucose Metabolism Is Associated with Increased Abundance of Prevotella

Kovatcheva-Datchary, P., Nilsson, A., Akrami, R., Lee, Y. S., De Vadder, F., Arora, T., Hallen, A., Martens, E., Björck, I., & Bäckhed, F. (2015) · Cell Metabolism · doi:10.1016/j.cmet.2015.10.001 · Cited by 1,731 · see citing works

Personalized Gut Mucosal Colonization Resistance to Empiric Probiotics Is Associated with Unique Host and Microbiome Features

Zmora, N., Zilberman-Schapira, G., Suez, J., Mor, U., Dori-Bachash, M., Bashiardes, S., Kotler, E., Zur, M., Regev-Lehavi, D., Brik, R. B.-Z., et al. (2018) · Cell · doi:10.1016/j.cell.2018.08.041 · Cited by 1,695 · see citing works

Dominant and diet-responsive groups of bacteria within the human colonic microbiota

Walker, A. W., Ince, J., Duncan, S. H., Webster, L. M., Holtrop, G., Ze, X., Brown, D., Stares, M. D., Scott, P., Bergerat, A., et al. (2011) · The ISME Journal · doi:10.1038/ismej.2010.118 · Cited by 1,632 · see citing works

Prevention of chronic disease in the 21st century: elimination of the leading preventable causes of premature death and disability in the USA

Bauer, U. E., Briss, P. A., Goodman, R. A., & Bowman, B. A. (2014) · The Lancet · doi:10.1016/s0140-6736(14)60648-6 · Cited by 1,395 · see citing works

Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors

Benson, A. K., Kelly, S. A., Legge, R., Ma, F., Low, S. J., Kim, J., Zhang, M., Oh, P. L., Nehrenberg, D., Hua, K., et al. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1007028107 · Cited by 1,314 · see citing works

Moving pictures of the human microbiome

Caporaso, J. G., Lauber, C. L., Costello, E. K., Berg-Lyons, D., Gonzalez, A., Stombaugh, J., Knights, D., Gajer, P., Ravel, J., Fierer, N., et al. (2011) · Genome Biology · doi:10.1186/gb-2011-12-5-r50 · Cited by 1,138 · see citing works

Diet dominates host genotype in shaping the murine gut microbiota

Carmody, R. N., Gerber, G. K., Luevano, J. M., Gatti, D. M., Somes, L., Svenson, K. L., & Turnbaugh, P. J. (2015) · Cell Host &amp; Microbe · doi:10.1016/j.chom.2014.11.010 · Cited by 1,103 · see citing works

Early differences in fecal microbiota composition in children may predict overweight

Kalliomäki, M. A., Collado, M. C., Salminen, S., & Isolauri, E. (2008) · American Journal of Clinical Nutrition · doi:10.1093/ajcn/87.3.534 · Cited by 1,056 · see citing works

Impacts of gut bacteria on human health and diseases

Zhang, Y.-J., Li, S., Gan, R.-Y., Zhou, T., Xu, D.-P., & Li, H.-B. (2015) · International Journal of Molecular Sciences · doi:10.3390/ijms16047493 · Cited by 1,055 · see citing works

Host lifestyle affects human microbiota on daily timescales

David, L. A., Materna, A. C., Friedman, J., Campos-Baptista, M. I., Blackburn, M. C., Perrotta, A., Erdman, S. E., & Alm, E. J. (2014) · Genome biology · doi:10.1186/gb-2014-15-7-r89 · Cited by 950 · cited 6× · see citing works

The effect of host genetics on the gut microbiome

Bonder, M. J., Kurilshikov, A., Tigchelaar, E. F., Mujagic, Z., Imhann, F., Vila, A. V., Deelen, P., Vatanen, T., Schirmer, M., Smeekens, S. P., et al. (2016) · Nature Genetics · doi:10.1038/ng.3663 · Cited by 819 · see citing works

Pharmacometabonomic identification of a significant host-microbiome metabolic interaction affecting human drug metabolism

Clayton, T. A., Baker, D., Lindon, J. C., Everett, J. R., & Nicholson, J. K. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0904489106 · Cited by 765 · see citing works

Gut microbiota–generated metabolites in animal health and disease

Lee, W.-J., & Hase, K. (2014) · Nature Chemical Biology · doi:10.1038/nchembio.1535 · Cited by 756 · see citing works

Specificity of Polysaccharide Use in Intestinal Bacteroides Species Determines Diet-Induced Microbiota Alterations

Sonnenburg, E. D., Zheng, H., Joglekar, P., Higginbottom, S. K., Firbank, S. J., Bolam, D. N., & Sonnenburg, J. L. (2010) · Cell · doi:10.1016/j.cell.2010.05.005 · Cited by 745 · see citing works

Resistant Starches Types 2 and 4 Have Differential Effects on the Composition of the Fecal Microbiota in Human Subjects

Martínez, I., Kim, J., Duffy, P. R., Schlegel, V. L., & Walter, J. (2010) · PLoS ONE · doi:10.1371/journal.pone.0015046 · Cited by 645 · see citing works

Impact of diet and individual variation on intestinal microbiota composition and fermentation products in obese men

Salonen, A., Lahti, L., Salojärvi, J., Holtrop, G., Korpela, K., Duncan, S. H., Date, P., Farquharson, F., Johnstone, A. M., Lobley, G. E., et al. (2014) · The ISME Journal · doi:10.1038/ismej.2014.63 · Cited by 626 · see citing works

Gut microbiome composition is linked to whole grain-induced immunological improvements

Martínez, I., Lattimer, J. M., Hubach, K. L., Case, J. A., Yang, J., Weber, C. G., Louk, J. A., Rose, D. J., Kyureghian, G., Peterson, D. A., et al. (2013) · The ISME Journal · doi:10.1038/ismej.2012.104 · Cited by 614 · see citing works

Fiber-utilizing capacity varies in Prevotella- versus Bacteroides-dominated gut microbiota

Chen, T., Long, W., Zhang, C., Liu, S., Zhao, L., & Hamaker, B. R. (2017) · Scientific Reports · doi:10.1038/s41598-017-02995-4 · Cited by 608 · see citing works

Interactions Between Gut Microbiota and Host Metabolism Predisposing to Obesity and Diabetes

Musso, G., Gambino, R., & Cassader, M. (2011) · Annual Review of Medicine · doi:10.1146/annurev-med-012510-175505 · Cited by 598 · see citing works

Association between composition of the human gastrointestinal microbiome and development of fatty liver with choline deficiency

Spencer, M. D., Hamp, T. J., Reid, R. W., Fischer, L. M., Zeisel, S. H., & Fodor, A. A. (2011) · Gastroenterology · doi:10.1053/j.gastro.2010.11.049 · Cited by 593 · see citing works

Genetic Control of Obesity and Gut Microbiota Composition in Response to High-Fat, High-Sucrose Diet in Mice

Parks, B. W., Nam, E., Org, E., Kostem, E., Norheim, F., Hui, S. T., Pan, C., Civelek, M., Rau, C. D., Bennett, B. J., et al. (2013) · Cell Metabolism · doi:10.1016/j.cmet.2012.12.007 · Cited by 544 · see citing works

The Impact of a Consortium of Fermented Milk Strains on the Gut Microbiome of Gnotobiotic Mice and Monozygotic Twins

McNulty, N. P., Yatsunenko, T., Hsiao, A., Faith, J. J., Muegge, B. D., Goodman, A. L., Henrissat, B., Oozeer, R., Cools-Portier, S., Gobert, G., et al. (2011) · Science Translational Medicine · doi:10.1126/scitranslmed.3002701 · Cited by 544 · see citing works

Predicting a Human Gut Microbiota’s Response to Diet in Gnotobiotic Mice

Faith, J. J., McNulty, N. P., Rey, F. E., & Gordon, J. I. (2011) · Science · doi:10.1126/science.1206025 · Cited by 536 · see citing works

Infant gut microbiota and food sensitization: associations in the first year of life

Azad, M. B., Konya, T., Guttman, D. S., Field, C. J., Sears, M. R., HayGlass, K. T., Mandhane, P. J., Turvey, S. E., Subbarao, P., Becker, A. B., et al. (2015) · Clinical & Experimental Allergy · doi:10.1111/cea.12487 · Cited by 500 · see citing works

Interplay Between Weight Loss and Gut Microbiota Composition in Overweight Adolescents

Santacruz, A., Marcos, A., Wärnberǵ, J., Martí, A., Martín‐Matillas, M., Campoy, C., Moreno, L. A., Veiga, Ó. L., Redondo-Figuero, C. G., Garagorri, J. M., et al. (2009) · Obesity · doi:10.1038/oby.2009.112 · Cited by 474 · see citing works

Randomised clinical trial: gut microbiome biomarkers are associated with clinical response to a low <scp>FODMAP</scp> diet in children with the irritable bowel syndrome

Chumpitazi, B. P., Cope, J. L., Hollister, E. B., Tsai, C. M., McMeans, A. R., Luna, R. A., Versalovic, J., & Shulman, R. J. (2015) · Alimentary Pharmacology &amp; Therapeutics · doi:10.1111/apt.13286 · Cited by 436 · see citing works

Human metabolism and excretion of cancer chemoprotective glucosinolates and isothiocyanates of cruciferous vegetables.

Shapiro, T. A., Fahey, J. W., Wade, K. L., Stephenson, K. K., & Talalay, P. (1998) · PubMed · Cited by 420 · see citing works

Quantifying Diet-Induced Metabolic Changes of the Human Gut Microbiome

Shoaie, S., Ghaffari, P., Kovatcheva‐Datchary, P., Mardinoğlu, A., Sen, P., Pujos‐Guillot, E., de Wouters, T., Juste, C., Rizkalla, S. W., Chilloux, J., et al. (2015) · Cell Metabolism · doi:10.1016/j.cmet.2015.07.001 · Cited by 417 · see citing works

Maternal fucosyltransferase 2 status affects the gut bifidobacterial communities of breastfed infants

Lewis, Z. T., Totten, S. M., Smilowitz, J. T., Popović, M., Parker, E. A., Lemay, D. G., Tassell, M. L. V., Miller, M. J., Jin, Y., German, J. B., et al. (2015) · Microbiome · doi:10.1186/s40168-015-0071-z · Cited by 412 · see citing works

Trimethylamine‐ <i>N</i> ‐oxide (TMAO) response to animal source foods varies among healthy young men and is influenced by their gut microbiota composition: A randomized controlled trial

Cho, C. E., Taesuwan, S., Malysheva, O. V., Bender, E., Tulchinsky, N. F., Yan, J., Sutter, J. L., & Caudill, M. A. (2017) · Molecular Nutrition &amp; Food Research · doi:10.1002/mnfr.201600324 · Cited by 405 · see citing works

The capacity of nondigestible carbohydrates to stimulate fecal bifidobacteria in healthy humans: a double-blind, randomized, placebo-controlled, parallel-group, dose-response relation study

Bouhnik, Y., Raskine, L., Simoneau, G., Vicaut, É., Neut, C., Flourié, B., Brouns, F. J. P. H., & Bornet, F. R. J. (2004) · American Journal of Clinical Nutrition · doi:10.1093/ajcn/80.6.1658 · Cited by 402 · see citing works

Gut microbiota richness promotes its stability upon increased dietary fibre intake in healthy adults

Tap, J., Furet, J., Bensaada, M., Philippe, C., Roth, H., Rabot, S., Lakhdari, O., Lombard, V., Henrissat, B., Corthier, G., et al. (2015) · Environmental Microbiology · doi:10.1111/1462-2920.13006 · Cited by 397 · see citing works

Analyses of gut microbiota and plasma bile acids enable stratification of patients for antidiabetic treatment

Gu, Y., Wang, X., Li, J., Zhang, Y., Zhong, H., Liu, R., Zhang, D., Feng, Q., Xie, X., Hong, J., et al. (2017) · Nature Communications · doi:10.1038/s41467-017-01682-2 · Cited by 396 · see citing works

Variable responses of human microbiomes to dietary supplementation with resistant starch

Venkataraman, A., Sieber, J. R., Schmidt, A. W., Waldron, C., Theis, K. R., & Schmidt, T. M. (2016) · Microbiome · doi:10.1186/s40168-016-0178-x · Cited by 384 · see citing works

Glycoprofiling of bifidobacterial consumption of human milk oligosaccharides demonstrates strain specific, preferential consumption of small chain glycans secreted in early human lactation

LoCascio, R. G., Ninonuevo, M. R., Freeman, S. L., Sela, D. A., Grimm, R., Lebrilla, C. B., Mills, D. A., & German, J. B. (2007) · Journal of Agricultural and Food Chemistry · doi:10.1021/jf0710480 · Cited by 365 · see citing works

Shotgun Metagenomics of 250 Adult Twins Reveals Genetic and Environmental Impacts on the Gut Microbiome

Xie, H., Guo, R., Zhong, H., Feng, Q., Lan, Z., Qin, B., Ward, K. J., Jackson, M. A., Xia, Y., Chen, X., et al. (2016) · Cell Systems · doi:10.1016/j.cels.2016.10.004 · Cited by 341 · see citing works

Barcoded Pyrosequencing Reveals That Consumption of Galactooligosaccharides Results in a Highly Specific Bifidogenic Response in Humans

Davis, L. M. G., Martínez, I., Walter, J., Goin, C., & Hutkins, R. W. (2011) · PLoS ONE · doi:10.1371/journal.pone.0025200 · Cited by 321 · see citing works

Bread Affects Clinical Parameters and Induces Gut Microbiome-Associated Personal Glycemic Responses

Korem, T., Zeevi, D., Zmora, N., Weissbrod, O., Bar, N., Lotan-Pompan, M., Avnit-Sagi, T., Kosower, N., Malka, G., Rein, M., et al. (2017) · Cell Metabolism · doi:10.1016/j.cmet.2017.05.002 · Cited by 318 · see citing works

Seasonal Variation in Human Gut Microbiome Composition

Davenport, E. R., Mizrahi-Man, O., Michelini, K., Barreiro, L. B., Ober, C., & Gilad, Y. (2014) · PLoS ONE · doi:10.1371/journal.pone.0090731 · Cited by 314 · see citing works

The prebiotic effects of biscuits containing partially hydrolysed guar gum and fructo-oligosaccharides – a human volunteer study

Tuohy, K. M., Kolida, S., Lustenberger, A. M., & Gibson, G. R. (2001) · British Journal Of Nutrition · doi:10.1079/bjn2001394 · Cited by 304 · see citing works

Interindividual variability in gut microbiota and host response to dietary interventions

Healey, G. R., Murphy, R., Brough, L., Butts, C. A., & Coad, J. (2017) · Nutrition Reviews · doi:10.1093/nutrit/nux062 · Cited by 296 · see citing works

Metabolic flexibility

Storlien, L., Oakes, N. D., & Kelley, D. E. (2004) · Proceedings of the Nutrition Society · doi:10.1079/pns2004349 · Cited by 291 · see citing works

Cross-species comparisons of host genetic associations with the microbiome

Goodrich, J. K., Davenport, E., Waters, J. L., Clark, A. G., & Ley, R. E. (2016) · Science · doi:10.1126/science.aad9379 · Cited by 290 · see citing works

Precision nutrition for prevention and management of type 2 diabetes

Wang, D. D., & Hu, F. B. (2018) · The Lancet Diabetes & Endocrinology · doi:10.1016/s2213-8587(18)30037-8 · Cited by 267 · see citing works

Metabolic effects of L actobacillus reuteri DSM 17938 in people with type 2 diabetes: A randomized controlled trial

Mobini, R., Tremaroli, V., Ståhlman, M., Karlsson, F. H., Levin, M., Ljungberg, M., Sohlin, M. C., Forslund, H. B., Perkins, R., Bäckhed, F., et al. (2016) · Diabetes Obesity and Metabolism · doi:10.1111/dom.12861 · Cited by 266 · see citing works

Ecological robustness of the gut microbiota in response to ingestion of transient food-borne microbes

Zhang, C., Derrien, M., Levenez, F., Brazeilles, R., Ballal, S. A., Kim, J., Degivry, M.-C., Quéré, G., Garault, P., van Hylckama Vlieg, J. E. T., et al. (2016) · The ISME Journal · doi:10.1038/ismej.2016.13 · Cited by 264 · see citing works

Prevotella-to-Bacteroides ratio predicts body weight and fat loss success on 24-week diets varying in macronutrient composition and dietary fiber: results from a post-hoc analysis

Hjorth, M. F., Blædel, T., Bendtsen, L. Q., Lorenzen, J. K., Holm, J. B., Kiilerich, P., Roager, H. M., Kristiansen, K., Larsen, L. H., & Astrup, A. V. (2018) · International Journal of Obesity · doi:10.1038/s41366-018-0093-2 · Cited by 262 · see citing works

Evidence of different metabolic phenotypes in humans

Assfalg, M., Bertini, I., Colangiuli, D., Luchinat, C., Schäfer, H., Schütz, B., & Spraul, M. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0705685105 · Cited by 256 · see citing works

Fecal Microbiota in Pediatric Inflammatory Bowel Disease and Its Relation to Inflammation

Kolho, K., Korpela, K., Jaakkola, T., Pichai, M. V. A., Zoetendal, E. G., Salonen, A., & de Vos, W. M. (2015) · The American Journal of Gastroenterology · doi:10.1038/ajg.2015.149 · Cited by 245 · see citing works

Epigenetic Matters: The Link between Early Nutrition, Microbiome, and Long-term Health Development

Indrio, F., Martini, S., Francavilla, R., Corvaglia, L., Cristofori, F., Mastrolia, S. A., Neu, J., Rautava, S., Spena, G. R., Raimondi, F., et al. (2017) · Frontiers in Pediatrics · doi:10.3389/fped.2017.00178 · Cited by 232 · see citing works

Clustering according to urolithin metabotype explains the interindividual variability in the improvement of cardiovascular risk biomarkers in overweight‐obese individuals consuming pomegranate: A randomized clinical trial

González‐Sarrías, A., Garcı́a-Villalba, R., Romo‐Vaquero, M., Alasalvar, C., Örem, A., Zafrilla, P., Tomás-Barberán, F. A., Selma, M. V., & Espı́n, J. C. (2016) · Molecular Nutrition & Food Research · doi:10.1002/mnfr.201600830 · Cited by 231 · see citing works

Intake of Refined Carbohydrates and Whole Grain Foods in Relation to Risk of Type 2 Diabetes Mellitus and Coronary Heart Disease

Liu, S. (2002) · Journal of the American College of Nutrition · doi:10.1080/07315724.2002.10719227 · Cited by 229 · see citing works

Gut Microbiota Signatures Predict Host and Microbiota Responses to Dietary Interventions in Obese Individuals

Korpela, K., Flint, H. J., Johnstone, A. M., Lappi, J., Poutanen, K. S., Dewulf, E. M., Delzenne, N. M., de Vos, W. M., & Salonen, A. (2014) · PLoS ONE · doi:10.1371/journal.pone.0090702 · Cited by 228 · see citing works

Multivariate modelling of faecal bacterial profiles of patients with IBS predicts responsiveness to a diet low in FODMAPs

Bennet, S. M. P., Böhn, L., Störsrud, S., Liljebo, T., Collin, L., Lindfors, P., Törnblom, H., Öhman, L., & Simrén, M. (2018) · Gut · doi:10.1136/gutjnl-2016-313128 · Cited by 225 · see citing works

Bifidobacterium animalis subsp. lactis fermented milk product reduces inflammation by altering a niche for colitogenic microbes

Veiga, P., Gallini, C. A., Beal, C., Michaud, M., Delaney, M. L., DuBois, A. M., Khlebnikov, A., Vlieg, J. E. T. V. H., Punit, S., Glickman, J. N., et al. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1011737107 · Cited by 220 · see citing works

Assessment of a personalized approach to predicting postprandial glycemic responses to food among individuals without diabetes

Mendes-Soares, H., Raveh-Sadka, T., Azulay, S., Edens, K., Ben-Shlomo, Y., Cohen, Y., Ofek, T., Bachrach, D., Stevens, J., Colibaseanu, D., et al. (2019) · JAMA Network Open · doi:10.1001/jamanetworkopen.2018.8102 · Cited by 212 · see citing works

Integrative Personal Omics Profiles during Periods of Weight Gain and Loss

Piening, B., Zhou, W., Contrepois, K., Röst, H. L., Gu, G. J., Mishra, T., Hanson, B., Bautista, E. J., Leopold, S. R., Yeh, C. Y., et al. (2018) · Cell Systems · doi:10.1016/j.cels.2017.12.013 · Cited by 210 · see citing works

Pre-treatment microbial Prevotella-to-Bacteroides ratio, determines body fat loss success during a 6-month randomized controlled diet intervention

Hjorth, M. F., Roager, H. M., Larsen, T. M., Poulsen, S. K., Licht, T. R., Bahl, M. I., Zohar, Y., & Astrup, A. V. (2017) · International Journal of Obesity · doi:10.1038/ijo.2017.220 · Cited by 207 · see citing works

Diet, the Gut Microbiome, and Epigenetics

Hullar, M. A. J., & Fu, B. C. (2014) · The Cancer Journal · doi:10.1097/ppo.0000000000000053 · Cited by 205 · see citing works

The gut microbiota urolithin metabotypes revisited: the human metabolism of ellagic acid is mainly determined by aging

Cortés‐Martín, A., Garcı́a-Villalba, R., González‐Sarrías, A., Romo‐Vaquero, M., Loria‐Kohen, V., de Molina, A. R., Tomás-Barberán, F. A., Selma, M. V., & Espı́n, J. C. (2018) · Food & Function · doi:10.1039/c8fo00956b · Cited by 205 · see citing works

Gut metabotypes govern health effects of dietary polyphenols

Bolca, S., de Wiele, T. V., & Possemiers, S. (2012) · Current Opinion in Biotechnology · doi:10.1016/j.copbio.2012.09.009 · Cited by 201 · see citing works

Gut metabolome meets microbiome: A methodological perspective to understand the relationship between host and microbe

Lamichhane, S., Sen, P., Dickens, A. M., Orešič, M., & Bertram, H. C. (2018) · Methods · doi:10.1016/j.ymeth.2018.04.029 · Cited by 200 · see citing works

Microbial Enterotypes, Inferred by the Prevotella-to-Bacteroides Ratio, Remained Stable during a 6-Month Randomized Controlled Diet Intervention with the New Nordic Diet

Roager, H. M., Licht, T. R., Poulsen, S. K., Larsen, T. M., & Bahl, M. I. (2014) · Applied and Environmental Microbiology · doi:10.1128/aem.03549-13 · Cited by 194 · see citing works

Human Milk Glycomics and Gut Microbial Genomics in Infant Feces Show a Correlation between Human Milk Oligosaccharides and Gut Microbiota: A Proof-of-Concept Study

Leoz, M. L. A. D., Kalanetra, K. M., Bokulich, N. A., Strum, J. S., Underwood, M. A., German, J. B., Mills, D. A., & Lebrilla, C. B. (2014) · Journal of Proteome Research · doi:10.1021/pr500759e · Cited by 192 · see citing works

Microbial enterotypes in personalized nutrition and obesity management

Christensen, L. H., Roager, H. M., Astrup, A. V., & Hjorth, M. F. (2018) · American Journal of Clinical Nutrition · doi:10.1093/ajcn/nqy175 · Cited by 191 · see citing works

Microbiota Modulate Host Gene Expression via MicroRNAs

Dalmasso, G., Nguyen, H. T. T., Yan, Y., Laroui, H., Charania, M. A., Ayyadurai, S., Sitaraman, S. V., & Merlin, D. (2011) · PLoS ONE · doi:10.1371/journal.pone.0019293 · Cited by 190 · see citing works

A double-blind placebo-controlled study to establish the bifidogenic dose of inulin in healthy humans

Kolida, S., Meyer, D., & Gibson, G. R. (2007) · European Journal of Clinical Nutrition · doi:10.1038/sj.ejcn.1602636 · Cited by 180 · see citing works

Agave Inulin Supplementation Affects the Fecal Microbiota of Healthy Adults Participating in a Randomized, Double-Blind, Placebo-Controlled, Crossover Trial1–3

Holscher, H. D., Bauer, L. L., Gourineni, V., Pelkman, C., Fahey, G. C., Jr., & Swanson, K. S. (2015) · Journal of Nutrition · doi:10.3945/jn.115.217331 · Cited by 180 · see citing works

Host genotype and gut microbiome modulate insulin secretion and diet-induced metabolic phenotypes

Kreznar, J. H., Keller, M. P., Traeger, L. L., Rabaglia, M. E., Schueler, K. L., Stapleton, D. S., Zhao, W., Vivas, E. I., Yandell, B. S., Broman, A. T., et al. (2017) · Cell Reports · doi:10.1016/j.celrep.2017.01.062 · Cited by 177 · see citing works

Guide for Current Nutrigenetic, Nutrigenomic, and Nutriepigenetic Approaches for Precision Nutrition Involving the Prevention and Management of Chronic Diseases Associated with Obesity

Ramos-López, O., Milagro, F. I., Allayee, H., Chmurzyńska, A., Choi, M. S., Curi, R., Caterina, R. D., Ferguson, L. R., Goñi, L., Kang, J. X., et al. (2017) · Lifestyle Genomics · doi:10.1159/000477729 · Cited by 172 · see citing works

The gut microbiota metabolism of pomegranate or walnut ellagitannins yields two urolithin-metabotypes that correlate with cardiometabolic risk biomarkers: Comparison between normoweight, overweight-obesity and metabolic syndrome

Selma, M. V., González‐Sarrías, A., Salas‐Salvadó, J., Andrés‐Lacueva, C., Alasalvar, C., Örem, A., Tomás-Barberán, F. A., & Espı́n, J. C. (2017) · Clinical Nutrition · doi:10.1016/j.clnu.2017.03.012 · Cited by 168 · see citing works

Dietary Fiber and the Human Gut Microbiota: Application of Evidence Mapping Methodology

Sawicki, C. M., Livingston, K. A., Obin, M. S., Roberts, S. B., Chung, M., & McKeown, N. M. (2017) · Nutrients · doi:10.3390/nu9020125 · Cited by 167 · see citing works

A first prospective, randomized, double-blind, placebo-controlled study on the use of a standardized hop extract to alleviate menopausal discomforts

Heyerick, A., Vervarcke, S., Depypere, H. T., Bracke, M., & Keukeleire, D. D. (2005) · Maturitas · doi:10.1016/j.maturitas.2005.10.005 · Cited by 165 · see citing works

Prior dietary practices and connections to a human gut microbial metacommunity alter responses to diet interventions

Griffin, N. W., Ahern, P. P., Cheng, J., Heath, A. C., Ilkayeva, O., Newgard, C. B., Fontana, L., & Gordon, J. I. (2017) · Cell Host &amp; Microbe · doi:10.1016/j.chom.2016.12.006 · Cited by 164 · see citing works

Individual Human Phenotypes in Metabolic Space and Time

Bernini, P., Bertini, I., Luchinat, C., Nepi, S., Saccenti, E., Schäfer, H., Schütz, B., Spraul, M., & Tenori, L. (2009) · Journal of Proteome Research · doi:10.1021/pr900344m · Cited by 149 · see citing works

Exploring and Understanding the Biochemical Diversity of the Human Microbiota

Koppel, N., & Balskus, E. P. (2016) · Cell chemical biology · doi:10.1016/j.chembiol.2015.12.008 · Cited by 138 · see citing works

Towards utilization of the human genome and microbiome for personalized nutrition

Bashiardes, S., Godneva, A., Elinav, E., & Segal, E. (2017) · Current Opinion in Biotechnology · doi:10.1016/j.copbio.2017.11.013 · Cited by 137 · see citing works

Deciphering the Human Gut Microbiome of Urolithin Metabotypes: Association with Enterotypes and Potential Cardiometabolic Health Implications

Romo‐Vaquero, M., Cortés‐Martín, A., Loria‐Kohen, V., de Molina, A. R., García‐Mantrana, I., Collado, M. C., Espı́n, J. C., & Selma, M. V. (2018) · Molecular Nutrition & Food Research · doi:10.1002/mnfr.201800958 · Cited by 137 · see citing works

Healthy Subjects Differentially Respond to Dietary Capsaicin Correlating with Specific Gut Enterotypes

Kang, C., Zhang, Y., Zhu, X., Liu, K., Wang, X., Chen, M., Wang, J., Chen, H., Hui, S., Huang, L., et al. (2016) · The Journal of Clinical Endocrinology & Metabolism · doi:10.1210/jc.2016-2786 · Cited by 132 · see citing works

Stability and Robustness of Human Metabolic Phenotypes in Response to Sequential Food Challenges

Heinzmann, S. S., Merrifield, C. A., Rezzi, S., Kochhar, S., Lindon, J. C., Holmes, E. C., & Nicholson, J. K. (2011) · Journal of Proteome Research · doi:10.1021/pr2005764 · Cited by 128 · see citing works

Eubacterium limosum Activates Isoxanthohumol from Hops (Humulus lupulus L.) into the Potent Phytoestrogen 8-Prenylnaringenin In Vitro and in Rat Intestine3

Possemiers, S., Rabot, S., Espı́n, J. C., Bruneau, A., Philippe, C., González‐Sarrías, A., Heyerick, A., Tomás-Barberán, F. A., Keukeleire, D. D., & Verstraete, W. (2008) · Journal of Nutrition · doi:10.1093/jn/138.7.1310 · Cited by 120 · see citing works

A Human Volunteer Study on the Prebiotic Effects of HP-Inulin—Faecal Bacteria Enumerated Using Fluorescent In Situ Hybridisation (FISH)

Tuohy, K. M., Finlay, R. K., Wynne, A. G., & Gibson, G. R. (2001) · Anaerobe · doi:10.1006/anae.2001.0368 · Cited by 120 · see citing works

Guide and Position of the International Society of Nutrigenetics/Nutrigenomics on Personalized Nutrition: Part 2 - Ethics, Challenges and Endeavors of Precision Nutrition

Kohlmeier, M., Caterina, R. D., Ferguson, L. R., Görman, U., Allayee, H., Prasad, C., Kang, J. X., Nicoletti, C. F., & Martínez, J. A. (2016) · Lifestyle Genomics · doi:10.1159/000446347 · Cited by 117 · see citing works

Metabolism of isoflavones, lignans and prenylflavonoids by intestinal bacteria: producer phenotyping and relation with intestinal community

Possemiers, S., Bolca, S., Eeckhaut, E., Depypere, H. T., & Verstraete, W. (2007) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.2007.00330.x · Cited by 116 · see citing works

Variation of glucoraphanin metabolism in vivo and ex vivo by human gut bacteria

Li, F., Hullar, M. A. J., Beresford, S. A. A., & Lampe, J. W. (2011) · British Journal Of Nutrition · doi:10.1017/s0007114511000274 · Cited by 115 · see citing works

Interindividual variability in the human metabolism of ellagic acid: Contribution of Gordonibacter to urolithin production

Romo‐Vaquero, M., Garcı́a-Villalba, R., González‐Sarrías, A., Beltrán, D., Tomás-Barberán, F. A., Espı́n, J. C., & Selma, M. V. (2015) · Journal of Functional Foods · doi:10.1016/j.jff.2015.06.040 · Cited by 109 · see citing works

Baseline microbiota activity and initial bifidobacteria counts influence responses to prebiotic dosing in healthy subjects

DE PRETER, V., VANHOUTTE, T., HUYS, G., SWINGS, J., RUTGEERTS, P., & VERBEKE, K. (2008) · Alimentary Pharmacology &amp; Therapeutics · doi:10.1111/j.1365-2036.2007.03588.x · Cited by 104 · see citing works

Individual variability in cardiovascular disease risk factor responses to low-fat and low-saturated-fat diets in men: body mass index, adiposity, and insulin resistance predict changes in LDL cholesterol

LeFevre, M. L., Champagne, C. M., Tulley, R. T., Rood, J. C., & Most, M. M. (2005) · American Journal of Clinical Nutrition · doi:10.1093/ajcn/82.5.957 · Cited by 104 · see citing works

Impact of palm date consumption on microbiota growth and large intestinal health: a randomised, controlled, cross-over, human intervention study

Eid, N. M. S., Osmanova, H., Natchez, C., Walton, G., Costabile, A., Gibson, G. R., Rowland, I. R., & Spencer, J. P. E. (2015) · British Journal Of Nutrition · doi:10.1017/s0007114515002780 · Cited by 103 · see citing works

Gut Microbial Carbohydrate Metabolism Hinders Weight Loss in Overweight Adults Undergoing Lifestyle Intervention With a Volumetric Diet

Pedrogo, D. A. M., Jensen, M. D., Dyke, C. T. V., Murray, J. A., Woods, J. A., Chen, J., Kashyap, P., & Nehra, V. (2018) · Mayo Clinic Proceedings · doi:10.1016/j.mayocp.2018.02.019 · Cited by 97 · see citing works

Microbial and dietary factors associated with the 8-prenylnaringenin producer phenotype: a dietary intervention trial with fifty healthy post-menopausal Caucasian women

Bolca, S., Possemiers, S., Maervoet, V. E. T., Huybrechts, I., Heyerick, A., Vervarcke, S., Depypere, H. T., Keukeleire, D. D., Bracke, M., Henauw, S. D., et al. (2007) · British Journal Of Nutrition · doi:10.1017/s0007114507749243 · Cited by 95 · see citing works

Insulin resistance and inflammation predict kinetic body weight changes in response to dietary weight loss and maintenance in overweight and obese subjects by using a Bayesian network approach

Kong, L. C., Wuillemin, P.-H., Bastard, J., Sokolovska, N., Gougis, S., Fellahi, S., Darakhshan, F., Bonnefont‐Rousselot, D., Bittar, R., Dore, J. M., et al. (2013) · American Journal of Clinical Nutrition · doi:10.3945/ajcn.113.058099 · Cited by 87 · see citing works

Human Gut Microbiome Response Induced by Fermented Dairy Product Intake in Healthy Volunteers

Игоревна, В. О., Klimenko, N. S., Berezhnaya, Y., Tyakht, A., Nesterova, P., Popenko, A., & Alexeev, D. G. (2019) · Nutrients · doi:10.3390/nu11030547 · Cited by 85 · see citing works

Potential mediators linking gut bacteria to metabolic health: a critical view

Janssen, A. W. F., & Kersten, S. (2016) · The Journal of Physiology · doi:10.1113/jp272476 · Cited by 82 · see citing works

Gene-Diet Interactions in Type 2 Diabetes: The Chicken and Egg Debate

Ortega, Á., Berná, G., Rojas, A., Martı́n, F., & Soria, B. (2017) · International Journal of Molecular Sciences · doi:10.3390/ijms18061188 · Cited by 82 · see citing works

Enterolignan-Producing Phenotypes Are Associated with Increased Gut Microbial Diversity and Altered Composition in Premenopausal Women in the United States

Hullar, M. A. J., Lancaster, S. M., Li, F., Tseng, E., Beer, K. D., Atkinson, C., Wähälä, K., Copeland, W. K., Randolph, T. W., Newton, K. M., et al. (2014) · Cancer Epidemiology Biomarkers & Prevention · doi:10.1158/1055-9965.epi-14-0262 · Cited by 80 · see citing works

Individualized Responses of Gut Microbiota to Dietary Intervention Modeled in Humanized Mice

Smits, S. A., Marcobal, A. M., Higginbottom, S. K., Sonnenburg, J. L., & Kashyap, P. (2016) · mSystems · doi:10.1128/msystems.00098-16 · Cited by 78 · see citing works

Influence of cabbage processing methods and prebiotic manipulationof colonic microflora on glucosinolate breakdown in man

Fuller, Z., Louis, P., Mihajlovski, A., Rungapamestry, V., Ratcliffe, B., & Duncan, A. J. (2007) · British Journal Of Nutrition · doi:10.1017/s0007114507709091 · Cited by 70 · see citing works

Responsiveness of cardiometabolic-related microbiota to diet is influenced by host genetics

O’Connor, A., Quizon, P. M., Albright, J., Lin, F. T., & Bennett, B. J. (2014) · Mammalian Genome · doi:10.1007/s00335-014-9540-0 · Cited by 67 · see citing works

The physiologic and phenotypic significance of variation in human amylase gene copy number

Atkinson, F. S., Hancock, D., Petocz, P., & Brand-Miller, J. C. (2018) · American Journal of Clinical Nutrition · doi:10.1093/ajcn/nqy164 · Cited by 62 · see citing works

Use of metabotyping for the delivery of personalised nutrition

O’Donovan, C. B., Walsh, M. C., Nugent, A. P., McNulty, B. A., Walton, J., Flynn, A., Gibney, M. J., Gibney, E. R., & Brennan, L. (2014) · Molecular Nutrition & Food Research · doi:10.1002/mnfr.201400591 · Cited by 60 · see citing works

Baseline insulin sensitivity affects response to high-amylose maize resistant starch in women: a randomized, controlled trial

Gower, B. A., Bergman, R. N., Stefanovski, D., Darnell, B. E., Ovalle, F., Fisher, G., Sweatt, S. K., Resuehr, H., & Pelkman, C. (2016) · Nutrition & Metabolism · doi:10.1186/s12986-016-0062-5 · Cited by 60 · see citing works

Personalized dietary management of overweight and obesity based on measures of insulin and glucose

Hjorth, M. F., Zohar, Y., Hill, J. O., & Astrup, A. (2018) · Annual Review of Nutrition · doi:10.1146/annurev-nutr-082117-051606 · Cited by 60 · see citing works

Dysbiosis of Gut Microbiome and Its Impact on Epigenetic Regulation

Lee, E. S., Song, E., & Nam, Y. D. (2017) · Journal of Clinical Epigenetics · doi:10.21767/2472-1158.100048 · Cited by 41 · see citing works

Dietary Fiber and the Human Gut Microbiome: Application of Evidence Mapping Methodology

Sawicki, C. M., Livingston, K. A., Obin, M. S., Roberts, S. B., Chung, M. C., & McKeown, N. M. (2015) · The FASEB Journal · doi:10.1096/fasebj.29.1_supplement.736.27 · Cited by 33 · see citing works

Geriatric Respondents and Non-Respondents to Probiotic Intervention Can be Differentiated by Inherent Gut Microbiome Composition

Suja Rani, S., Prajapati, J. B., Joshi, C. G., Sreeja, V., Gohel, M. K., Trivedi, S. S., Patel, R., Pandya, H. V., Singh, U. S., Phatak, A. G., et al. (2015) · Frontiers in Microbiology · doi:10.3389/fmicb.2015.00944 · Cited by 28 · see citing works

Gene–Dairy Food Interactions and Health Outcomes: A Review of Nutrigenetic Studies

Comerford, K. B., & Pasin, G. (2017) · Nutrients · doi:10.3390/nu9070710 · Cited by 28 · see citing works

Towards an Individualized Nutrition Treatment: Role of the Gastrointestinal Microbiome in the Interplay Between Diet and Obesity

Adalsteinsdottir, S., Magnúsdóttir, Ó. K., Halldorsson, T. I., & Birgisdóttir, B. E. (2018) · Current Obesity Reports · doi:10.1007/s13679-018-0321-z · Cited by 20 · see citing works

An Algorithm-based Personalized Nutrition Platform Improves Metabolic Biomarkers

Westerman, K. E., Reaver, A., Blander, G., Nogal, B., Ward, C., Benard, T., Katz, D. L., & Blumberg, J. M. (2017) · Journal of the Academy of Nutrition and Dietetics · doi:10.1016/j.jand.2017.06.379 · Cited by 1 · see citing works

2021 Dietary guidance to improve cardiovascular health: a scientific statement from the American Heart Association

Lichtenstein, A. H., Appel, L. J., Vadiveloo, M., Hu, F. B., Kris-Etherton, P. M., Rebholz, C. M., Sacks, F. M., Thorndike, A. N., Van Horn, L., Wylie-Rosett, J., et al. (2021) · Circulation · doi:10.1161/cir.0000000000001031 · Cited by 1,065 · see citing works

Human postprandial responses to food and potential for precision nutrition

Berry, S. E., Valdes, A. M., Drew, D. A., Asnicar, F., Mazidi, M., Wolf, J., Capdevila, J., Hadjigeorgiou, G., Davies, R., Al Khatib, H., et al. (2020) · Nature Medicine · doi:10.1038/s41591-020-0934-0 · Cited by 932 · see citing works

Diet and the Microbiota–Gut–Brain Axis: Sowing the Seeds of Good Mental Health

Berding, K., Vlckova, K., Marx, W., Schellekens, H., Stanton, C., Clarke, G., Jacka, F., Dinan, T. G., & Cryan, J. F. (2021) · Advances in Nutrition · doi:10.1093/advances/nmaa181 · Cited by 451 · see citing works

The Prebiotic Potential of Inulin-Type Fructans: A Systematic Review

Hughes, R., Alvarado, D. A., Swanson, K. S., & Holscher, H. D. (2021) · Advances in Nutrition · doi:10.1093/advances/nmab119 · Cited by 301 · see citing works

Fueling Gut Microbes: A Review of the Interaction between Diet, Exercise, and the Gut Microbiota in Athletes

Hughes, R., & Holscher, H. D. (2021) · Advances in Nutrition · doi:10.1093/advances/nmab077 · Cited by 198 · see citing works

A Guide to Diet-Microbiome Study Design

Johnson, A. J., Zheng, J. J., Kang, J. W., Saboe, A., Knights, D., & Zivkovic, A. M. (2020) · Frontiers in Nutrition · doi:10.3389/fnut.2020.00079 · Cited by 161 · see citing works

A Review of the Role of the Gut Microbiome in Personalized Sports Nutrition

Hughes, R. (2020) · Frontiers in Nutrition · doi:10.3389/fnut.2019.00191 · Cited by 141 · see citing works

Deciphering diet-gut microbiota-host interplay: Investigations of pectin

Tan, H., & Nie, S. (2020) · Trends in Food Science & Technology · doi:10.1016/j.tifs.2020.10.010 · Cited by 119 · see citing works

The gut microbiota and depressive symptoms across ethnic groups

Bosch, J. A., Nieuwdorp, M., Zwinderman, A. H., Deschasaux, M., Radjabzadeh, D., Kraaij, R., Davids, M., de Rooij, S. R., & Lok, A. (2022) · Nature Communications · doi:10.1038/s41467-022-34504-1 · Cited by 104 · see citing works

Unraveling the Gut Microbiota: Implications for Precision Nutrition and Personalized Medicine

Abeltino, A., Hatem, D., Serantoni, C., Riente, A., Giulio, M. M. D., Spirito, M. D., Maio, F. D., & Maulucci, G. (2024) · Nutrients · doi:10.3390/nu16223806 · Cited by 108 · see citing works

Effect of probiotics on obesity-related markers per enterotype: a double-blind, placebo-controlled, randomized clinical trial

Song, E., Han, K., Lim, T.-J., Lim, S., Chung, M.-J., Nam, M. H., Kim, H., & Nam, Y. (2020) · The EPMA Journal · doi:10.1007/s13167-020-00198-y · Cited by 96 · see citing works

Fermented Dairy Products as Precision Modulators of Gut Microbiota and Host Health: Mechanistic Insights, Clinical Evidence, and Future Directions

Gao, Y., Liu, Y., Ma, T., Liang, Q., Sun, J., Wu, X., Song, Y., Nie, H., HUANG, J. C., & Mu, G. (2025) · Foods · doi:10.3390/foods14111946 · Cited by 100 · see citing works

Gut microbiota predicts body fat change following a low-energy diet: a PREVIEW intervention study

Jian, C., Silvestre, M. P., Middleton, D., Korpela, K., Jalo, E., Broderick, D. T. J., de Vos, W. M., Fogelholm, M., Taylor, M. W., Raben, A., et al. (2022) · Genome Medicine · doi:10.1186/s13073-022-01053-7 · Cited by 87 · see citing works

A review on probiotics and dietary bioactives: Insights on metabolic well-being, gut microbiota, and inflammatory responses

Mafe, A. N., Edo, G. I., Majeed, O. S., Gaaz, T. S., Akpoghelie, P. O., Isoje, E. F., Igbuku, U. A., Owheruo, J. O., Opiti, R. A., Garba, Y., et al. (2025) · Food Chemistry Advances · doi:10.1016/j.focha.2025.100919 · Cited by 88 · see citing works

The Effects of High Fiber Rye, Compared to Refined Wheat, on Gut Microbiota Composition, Plasma Short Chain Fatty Acids, and Implications for Weight Loss and Metabolic Risk Factors (the RyeWeight Study)

Iversen, K., Dicksved, J., Zoki, C., Fristedt, R., Pelve, E. A., Langton, M., & Landberg, R. (2022) · Nutrients · doi:10.3390/nu14081669 · Cited by 76 · see citing works

Predicting Personalized Responses to Dietary Fiber Interventions: Opportunities for Modulation of the Gut Microbiome to Improve Health

Kok, C. R., Rose, D. J., & Hutkins, R. W. (2022) · Annual Review of Food Science and Technology · doi:10.1146/annurev-food-060721-015516 · Cited by 79 · see citing works

Recent advances in prebiotics: Classification, mechanisms, and health applications

Ali, S., Hamayun, M., Siraj, M., Khan, S. A., Kim, H., & Lee, B. (2025) · Future Foods · doi:10.1016/j.fufo.2025.100680 · Cited by 70 · see citing works

Precision Nutrition Unveiled: Gene–Nutrient Interactions, Microbiota Dynamics, and Lifestyle Factors in Obesity Management

Mansour, S., Alkhaaldi, S. M. I., Sammanasunathan, A. F., Ibrahim, S. M., Farhat, J., & Al‐Omari, B. (2024) · Nutrients · doi:10.3390/nu16050581 · Cited by 58 · see citing works

The microbiota-gut-brain axis: An emerging therapeutic target in chemotherapy-induced cognitive impairment

Subramaniam, C. B., Bowen, J. M., Gladman, M. A., Lustberg, M. B., Mayo, S. J., & Wardill, H. R. (2020) · Neuroscience & Biobehavioral Reviews · doi:10.1016/j.neubiorev.2020.07.002 · Cited by 56 · see citing works

The gut dysbiosis-cancer axis: illuminating novel insights and implications for clinical practice

Asseri, A. H., Bakhsh, T., Abuzahrah, S. S., Ali, S., & Rather, I. A. (2023) · Frontiers in Pharmacology · doi:10.3389/fphar.2023.1208044 · Cited by 54 · see citing works

Parkinson’s disease patients’ short chain fatty acids production capacity after in vitro fecal fiber fermentation

Baert, F., Matthys, C., Maselyne, J., Poucke, C. V., Coillie, E. V., Bergmans, B. A., & Vlaemynck, G. (2021) · npj Parkinson s Disease · doi:10.1038/s41531-021-00215-5 · Cited by 53 · see citing works

Structure, Health Benefits, Mechanisms, and Gut Microbiota of Dendrobium officinale Polysaccharides: A Review

Wu, W.-G., Zhao, Z., Zhao, Z., Zhang, D., Zhang, Q., Zhang, J., Fang, Z., Bai, Y., & Guo, X. (2023) · Nutrients · doi:10.3390/nu15234901 · Cited by 47 · see citing works

Predicting metabolite response to dietary intervention using deep learning

Wang, T., Holscher, H. D., Maslov, S., Hu, F. B., Weiss, S. T., & Liu, Y. (2025) · Nature Communications · doi:10.1038/s41467-025-56165-6 · Cited by 46 · see citing works

Vascular Calcification and the Gut and Blood Microbiome in Chronic Kidney Disease Patients on Peritoneal Dialysis: A Pilot Study

Merino-Ribas, A., Araújo, R., Pereira, L., Campos, J., Barreiros, L., Segundo, M. A., Silva, N., Costa, C. F. F. A., Quelhas‐Santos, J., Trindade, F., et al. (2022) · Biomolecules · doi:10.3390/biom12070867 · Cited by 41 · see citing works

Therapeutic Potential of Various Plant-Based Fibers to Improve Energy Homeostasis via the Gut Microbiota

Martinez, T. M., Meyer, R. K., & Duca, F. A. (2021) · Nutrients · doi:10.3390/nu13103470 · Cited by 41 · see citing works

Fecal Bacteria as Biomarkers for Predicting Food Intake in Healthy Adults

Shinn, L. M., Li, Y., Mansharamani, A., Auvil, L. S., Welge, M. E., Bushell, C., Khan, N. A., Charron, C. S., Novotny, J. A., Baer, D. J., et al. (2020) · Journal of Nutrition · doi:10.1093/jn/nxaa285 · Cited by 40 · see citing works

The Gut Microbiome in Human Obesity: A Comprehensive Review

Borrego-Ruiz, A., & Borrego, J. J. (2025) · Biomedicines · doi:10.3390/biomedicines13092173 · Cited by 45 · see citing works

Positive influence of gut microbiota on the effects of Korean red ginseng in metabolic syndrome: a randomized, double-blind, placebo-controlled clinical trial

Seong, E., Bose, S., Han, S.-Y., Song, E., Lee, M.-J., Nam, Y., & Kim, H. (2021) · The EPMA Journal · doi:10.1007/s13167-021-00243-4 · Cited by 37 · see citing works

Higher protein intake during resistance training does not potentiate strength, but modulates gut microbiota, in middle-aged adults: a randomized control trial

McKenna, C. F., Salvador, A. F., Hughes, R., Scaroni, S. E., Alamilla, R. A., Askow, A. T., Paluska, S. A., Dilger, A. C., Holscher, H. D., Lisio, M. D., et al. (2021) · American Journal of Physiology-Endocrinology and Metabolism · doi:10.1152/ajpendo.00574.2020 · Cited by 34 · see citing works

Analysing microbiome intervention design studies: Comparison of alternative multivariate statistical methods

Khomich, M., Måge, I., Rud, I., & Berget, I. (2021) · PLoS ONE · doi:10.1371/journal.pone.0259973 · Cited by 31 · see citing works

Gut microbiota in surgical and critically ill patients

Ho, K. M., Kalgudi, S., Corbett, J.-M., & Litton, E. (2020) · Anaesthesia and Intensive Care · doi:10.1177/0310057x20903732 · Cited by 32 · see citing works

Faeces from malnourished colorectal cancer patients accelerate cancer progression

Xu, C., Zhang, L., Hongqin, L., Wang, Z., Li, D., Wei-dong, D., Lu, X., Haitao, C., Zhang, B., Ju, H., et al. (2022) · Clinical Nutrition · doi:10.1016/j.clnu.2022.01.001 · Cited by 29 · see citing works

Insoluble/soluble fraction ratio determines effects of dietary fiber on gut microbiota and serum metabolites in healthy mice

Zhang, Y. L., Hu, J., Zhong, Y., Liu, S., Liu, L., Mu, X., Chen, C., Yang, S., Li, G., Zhang, D., et al. (2023) · Food & Function · doi:10.1039/d3fo04068b · Cited by 28 · see citing works

The Key to Successful Weight Loss on a High-Fiber Diet May Be in Gut Microbiome Prevotella Abundance

Ortega‐Santos, C. P., & Whisner, C. M. (2019) · Journal of Nutrition · doi:10.1093/jn/nxz248 · Cited by 25 · see citing works

Resistant Starch and Microbiota-Derived Secondary Metabolites: A Focus on Postbiotic Pathways in Gut Health and Irritable Bowel Syndrome

Kovács, E., Szabo, K., Varvara, R.-A., Uifălean, A., Cozma, A., Vulturar, R., Sitar-Tăut, A., Gabbianelli, R., Myhrstad, M. C. W., Telle‐Hansen, V. H., et al. (2025) · International Journal of Molecular Sciences · doi:10.3390/ijms26167753 · Cited by 25 · see citing works

The Role of Butyric Acid and Microorganisms in Chronic Inflammatory Diseases and Microbiome-Based Therapeutics

Liu, Z., Jiang, Y., Fan, Q., Li, S., & Wang, Y. (2025) · Journal of Inflammation Research · doi:10.2147/jir.s540163 · Cited by 24 · see citing works

Peri-operative antibiotics acutely and significantly impact intestinal microbiota following bariatric surgery

Nalluri, H., Kizy, S., Ewing, K., Luthra, G., Leslie, D. B., Bernlohr, D., Sadowsky, M. J., Ikramuddin, S., Khoruts, A., Staley, C. M., et al. (2020) · Scientific Reports · doi:10.1038/s41598-020-77285-7 · Cited by 24 · see citing works

Harnessing AI and Gut Microbiome Research for Precision Health

Saxena, R., Sharma, V., Saxena, A. R., & Patel, A. (2024) · Journal of Artificial Intelligence General science (JAIGS) · doi:10.60087/jaigs.v3i1.68 · Cited by 25 · see citing works

Gut Microbiota and Mental Health: A Comprehensive Review of Gut-Brain Interactions in Mood Disorders

Mehta, I., Juneja, K., Nimmakayala, T., Bansal, L. R., Pulekar, S., Duggineni, D., Ghori, H. K., Modi, N. M., & Younas, S. (2025) · Cureus · doi:10.7759/cureus.81447 · Cited by 27 · see citing works

Infant gut microbiota characteristics generally do not modify effects of lipid-based nutrient supplementation on growth or inflammation: secondary analysis of a randomized controlled trial in Malawi

Hughes, R., Arnold, C. D., Young, R. R., Ashorn, P., Maleta, K. M., Fan, Y., Ashorn, U., Chaima, D., Malamba-Banda, C., Kable, M. E., et al. (2020) · Scientific Reports · doi:10.1038/s41598-020-71922-x · Cited by 21 · see citing works

Systematic Review and Meta-Analysis of Dietary Interventions and Microbiome in Phenylketonuria

Ubaldi, F., Frangella, C., Volpini, V., Fortugno, P., Valeriani, F., & Spica, V. R. (2023) · International Journal of Molecular Sciences · doi:10.3390/ijms242417428 · Cited by 16 · see citing works

Soy and Frequent Dairy Consumption with Subsequent Equol Production Reveals Decreased Gut Health in a Cohort of Healthy Puerto Rican Women

Lacourt-Ventura, M., Vilanova-Cuevas, B., Rivera-Rodríguez, D. M., Rosario-Acevedo, R., Miranda, C., Maldonado-Martínez, G., Maysonet, J., Vargas, D., Ruiz, Y., Hunter-Mellado, R., et al. (2021) · International Journal of Environmental Research and Public Health · doi:10.3390/ijerph18168254 · Cited by 15 · see citing works

Personalized diets based on multi-objective optimization of nutrition and sensory characteristics: A digital strategy for enhancing food quality

Wang, Z., Huang, Q., Ji, S., Amrouche, A. T., Zhu, Y., Li, X., Shen, J., Xiao, H., Li, P., & Lu, B. (2024) · Trends in Food Science & Technology · doi:10.1016/j.tifs.2024.104842 · Cited by 15 · see citing works

The Fecal Metabolome Links Diet Composition, Foacidic positive ion conditions, chromatographicallyod Processing, and the Gut Microbiota to Gastrointestinal Health in a Randomized Trial of Adults Consuming a Processed Diet

Karl, J. P., Armstrong, N. J., Player, R. A., Rood, J. C., Soares, J. W., & McClung, H. L. (2022) · Journal of Nutrition · doi:10.1093/jn/nxac161 · Cited by 15 · see citing works

The impact of butyrate on glycemic control in animals and humans: a comprehensive semi-systemic review

Hamari, N., Blaak, E. E., & Canfora, E. E. (2025) · Frontiers in Nutrition · doi:10.3389/fnut.2025.1603490 · Cited by 14 · see citing works

Baseline gut microbiome and metabolites are correlated with changes in alcohol consumption in participants in a randomized Zonisamide clinical trial

Dedon, L. R., Yuan, H., Chi, J., Gu, H., Arias, A. J., Covault, J., & Zhou, Y. (2025) · Scientific Reports · doi:10.1038/s41598-025-92313-0 · Cited by 14 · see citing works

Circulating miRNAs As Early Indicators of Diet and Physical Activity Response in Women With Metastatic Breast Cancer

Olson, J. M. G., Sheean, P., Matthews, L., Chitambar, C. R., Banerjee, A., Visotcky, A. M., Bonini, M. G., & Stolley, M. R. (2021) · Future Science OA · doi:10.2144/fsoa-2020-0208 · Cited by 13 · see citing works

Modulation of gut microbiome in response to the combination of Escherichia coli Nissle 1917 and sugars: a pilot study using host-free system reflecting impact on interpersonal microbiome

Heer, K., Kaur, M., Sidhu, D., Dey, P., & Raychaudhuri, S. (2024) · Frontiers in Nutrition · doi:10.3389/fnut.2024.1452784 · Cited by 12 · see citing works

All That Glitters Ain’t Gold: The Myths and Scientific Realities About the Gut Microbiota

Dey, P. (2025) · Nutrients · doi:10.3390/nu17193121 · Cited by 10 · see citing works

A scoping review of the health effects of fermented foods in specific human populations and their potential role in precision nutrition: current knowledge and gaps

Humblot, C., Alvanoudi, P., Alves, E., Assunção, R., Belović, M. M., Tüccar, T. B., Chassard, C., Derrien, M., Karagöz, M. F., Karakaya, S., et al. (2025) · Frontiers in Nutrition · doi:10.3389/fnut.2025.1650633 · Cited by 10 · see citing works

Metagenomic analysis reveals hidden links between gut microbes and habitat adaptation among cave and surface dwelling Sinocyclocheilus species

Chen, H.-Y., 云南大学生态与环境学院, 云. 昆. 6., Li, C., Chen, S., Xiao, H., & 中国医学科学院/北京协和医学院医学生物学研究所, 云. 昆. 6. (2023) · 动物学研究 · doi:10.24272/j.issn.2095-8137.2022.195 · Cited by 10 · see citing works

Non-antibiotic therapies for multidrug-resistant gastrointestinal infections: an overview of the use of probiotics, natural compounds, and bacteriophages

Oliveira, M. T. D. S., Madureira-Carvalho, Á., Dinis‐Oliveira, R. J., & da Silva, D. D. (2025) · Frontiers in Antibiotics · doi:10.3389/frabi.2025.1554061 · Cited by 10 · see citing works

Precision nutrition for obesity management: A gut microbiota–centered weight-loss approach

Carvalho, L. M., da Mota, J. C. N. L., Ribeiro, A., Carvalho, B. G., Martínez, J. A., & Nicoletti, C. F. (2025) · Nutrition · doi:10.1016/j.nut.2025.112892 · Cited by 10 · see citing works

Mitigation of Metabolic Diseases Through Personalized Nutrition: A Critical In‐Depth Review

Arshad, M. T., Ali, M. K. M., Awlqadr, F. H., Maqsood, S., Ikram, A., Hossain, M. S., Abdullahi, M. A., & Rashed, M. M. (2026) · Food Science & Nutrition · doi:10.1002/fsn3.71387 · Cited by 9 · see citing works

An Overview of Current Knowledge of the Gut Microbiota and Low-Calorie Sweeteners

Hughes, R., Davis, C. D., Lobach, A. R., & Holscher, H. D. (2021) · Nutrition Today · doi:10.1097/nt.0000000000000481 · Cited by 9 · see citing works

Fermentation profile, cholesterol-reducing properties and chemopreventive potential of β-glucans from Levilactobacillus brevis and Pediococcus claussenii – a comparative study with β-glucans from different sources

Schlörmann, W., Bockwoldt, J. A., Mayr, M. F., Lorkowski, S., Dawczynski, C., Rohn, S., Ehrmann, M. A., & Glei, M. (2021) · Food & Function · doi:10.1039/d1fo02175c · Cited by 9 · see citing works

NEMoE: a nutrition aware regularized mixture of experts model to identify heterogeneous diet-microbiome-host health interactions

Xu, X., Lubomski, M., Holmes, A. J., Sue, C. M., Davis, R. L., Müller, S., & Yang, J. Y. H. (2023) · Microbiome · doi:10.1186/s40168-023-01475-4 · Cited by 8 · see citing works

The power and potential of BIOMAP to elucidate host‐microbiome interplay in skin inflammatory diseases

Alenius, H. T., Sinkko, H., Moitinho‐Silva, L., Rodríguez, E., Broderick, C., Alexander, H., Reiger, M., Hjelmsø, M. H., Fyhrquist, N., Oláh, P., et al. (2021) · Experimental Dermatology · doi:10.1111/exd.14446 · Cited by 8 · see citing works

Personalised Nutrition Approaches in the Prevention and Management of Type 2 Diabetes: A Narrative Review of Evidence and Practice

Mphasha, M. H., & Mothiba, T. M. (2025) · International Journal of Environmental Research and Public Health · doi:10.3390/ijerph22071047 · Cited by 7 · see citing works

Nutritional psychology and inflammatory bowel disease: a narrative review of gut-brain axis interactions

Horovitz, O. (2025) · Frontiers in Nutrition · doi:10.3389/fnut.2025.1592528 · Cited by 7 · see citing works

Optimizing Dietary Fiber Intake: Strategies for Human Nutrition and Food Science

Walsh, S. K., Armet, A. M., Nikolaeva, D. D., Mota, J. F., Lucey, A. J., Oliero, M., & Walter, J. (2026) · Annual Review of Food Science and Technology · doi:10.1146/annurev-food-052824-044842 · Cited by 7 · see citing works

Methods in Nutrition & Gut Microbiome Research: An American Society for Nutrition Satellite Session [13 October 2022]

Hughes, R., Frankenfeld, C. L., Gohl, D. M., Huttenhower, C., Jackson, S. A., Vandeputte, D., Vogtmann, E., Comstock, S. S., & Kable, M. E. (2023) · Nutrients · doi:10.3390/nu15112451 · Cited by 6 · see citing works

Gut microbiomes of agropastoral children from the Adadle region of Ethiopia reflect their unique dietary habits

Yersin, S., Garneau, J. R., Schneeberger, P. H. H., Osman, K. A., Cercamondi, C. I., Muhummed, A. M., Tschopp, R., Zinsstag, J., & Vonaesch, P. (2023) · Scientific Reports · doi:10.1038/s41598-023-47748-8 · Cited by 6 · see citing works

Advancements in precision nutrition: Targeted strategies for personalized health

Zheng, H., Zhang, X., Su, W., Zaky, A. A., EL-Aty, A. M. A., Xu, E., Liu, D., & Tan, M. (2026) · The Innovation Life · doi:10.59717/j.xinn-life.2026.100191 · Cited by 6 · see citing works

Benefits of Stevia rebaudian root inulin on mice health in long-term exposure study

Liu, C., Wang, Y., Yang, X., Xu, Y., Wang, M., Yuan, P., Li, P., Yang, J., Chen, K., Wang, G., et al. (2023) · Journal of Functional Foods · doi:10.1016/j.jff.2023.105943 · Cited by 5 · see citing works

The Hygienic Significance of Microbiota and Probiotics for Human Wellbeing

Todorov, S. D., Tagg, J. R., Algburi, A., Tiwari, S. K., Popov, I. V., Weeks, R. M., Mitrokhin, O. V., Kudryashov, I. A., Александрович, К. Д., & Chikindas, M. L. (2024) · Probiotics and Antimicrobial Proteins · doi:10.1007/s12602-024-10419-9 · Cited by 5 · see citing works

Artificial Neural Network Algorithm in Nutritional Assessment

Oyekunle, D. O. T., Esseme, A. C. B., Oladipupo, M. A., Oseni, V. E., Adebola, N. T., Nwaiku, M., Nwanakwaugwu, A. C., & Matthew, U. O. (2024) · Advances in medical technologies and clinical practice book series · doi:10.4018/979-8-3693-4422-4.ch013 · Cited by 4 · see citing works

Comparing apples to apples: Evaluating foodomics in precision nutrition research featuring the influence of polyphenols on the gut microbiome

Keohane, E., Prenni, J. E., Johnson, S. A., & Buiten, C. B. V. (2025) · Nutrition Research · doi:10.1016/j.nutres.2025.09.003 · Cited by 4 · see citing works

Precision Nutrition for Type 2 Diabetes

Ben-Yacov, O., & Rein, M. (2022) · Springer eBooks · doi:10.1007/978-3-030-98927-9_12 · Cited by 4 · see citing works

Precise Nutrition and Metabolic Syndrome, Remodeling the Microbiome with Polyphenols, Probiotics, and Postbiotics

Brizita, D. I., & Ivanović, N. (2022) · Springer eBooks · doi:10.1007/978-3-031-10153-3_6 · Cited by 4 · see citing works

Human Nutrition Research in the Data Era: Results of 11 Reports on the Effects of a Multiple-Micronutrient-Intervention Study

Kaput, J., & Monteiro, J. P. (2024) · Nutrients · doi:10.3390/nu16020188 · Cited by 4 · see citing works

The interconnection between dietary fibre, gut microbiome and psychological well-being

Ng, H. M., Wall, C. L., Bayer, S. B., Gearry, R. B., & Roy, N. C. (2025) · Proceedings of The Nutrition Society · doi:10.1017/s002966512510061x · Cited by 4 · see citing works

High-dose Dietary Fibre Supplementation Enhances the Gut Microbiome, Health, and Athletic Performance of College Basketball Players.

Zha, Y., Xiang, M., Zuo, Y., Liu, D.-S., & Wang, Q. (2025) · International journal for vitamin and nutrition research. Internationale Zeitschrift fur Vitamin- und Ernahrungsforschung. Journal international de vitaminologie et de nutrition · doi:10.31083/ijvnr37069 · Cited by 3 · see citing works

The Interplay of Diet, Genome, Metabolome, and Gut Microbiome in Cardiovascular Disease: A Narrative Review

Mofrad, M. D., Ahn, S., & Chun, O. K. (2025) · Current Medicinal Chemistry · doi:10.2174/0109298673342364241119114722 · Cited by 3 · see citing works

Inter-Individual Responses to a Blueberry Intervention across Multiple Endpoints

Wang, Y., Haskell‐Ramsay, C. F., Lara, J., & Lodge, J. K. (2024) · Nutrients · doi:10.3390/nu16060895 · Cited by 3 · see citing works

Wish or Truth: Can Digital Interventions Stop the Obesity Crisis?

Portius, D. (2024) · Management for professionals · doi:10.1007/978-3-031-47768-3_8 · Cited by 2 · see citing works

Food-gut microbiota interactions

Berding, K., Kaulmann, D., & Cryan, J. (2022) · Probiotics · doi:10.1016/b978-0-323-85170-1.00011-7 · Cited by 3 · see citing works

Personalized Nutrition for Healthy Aging, A Review

Pointner, A., & Haslberger, A. G. (2022) · Springer eBooks · doi:10.1007/978-3-031-10153-3_5 · Cited by 3 · see citing works

Baseline gut microbiome and metabolites are correlated with alcohol consumption in a zonisamide clinical trial of heavy drinking alcoholic civiliansPreprint

Dedon, L. R., Yuan, H., Chi, J., Gu, H., Arias, A. J., Covault, J., & Zhou, Y. (2024) · medRxiv · doi:10.1101/2024.04.02.24305199 · Cited by 2 · see citing works

Major metabolic and metabolomic aspects of nutrition in the gut microbiota and sports performance: a systematic review

Ishikawa, V. N., Gontijo, G. M., Ichikawa, A. I. T., Bubna, P., Conter, F. D. S., de Queiroz, A. C. M., Picchia, R. D., Nunes, B. M. M., & Cardillo, I. C. P. (2023) · International Journal of Nutrology · doi:10.54448/ijn23224 · Cited by 1 · see citing works

Functional gut variability drives metabolic and transcriptional features in neonatal piglets

He, X., McClorry, S., Lee, H., Hartvigsen, M. L., Kvistgaard, A. S., & Slupsky, C. M. (2025) · npj Science of Food · doi:10.1038/s41538-025-00571-z · Cited by 1 · see citing works

Influence of the Gut-Brain Axis on Psychiatric Comorbidity in Inflammatory Bowel Disease

Borrego-Ruiz, A., & Borrego, J. J. (2026) · Psychiatry International · doi:10.3390/psychiatryint7020052 · Cited by 1 · see citing works

Role of diet in shaping the gut microbiome

Siddiqui, B., Tiwari, S., Fatima, S., & Abdin, M. Z. (2026) · Elsevier eBooks · doi:10.1016/b978-0-443-40483-2.00027-3 · Cited by 1 · see citing works

Dairy Bioactive Compounds as Precision Modulators of Gut Microbiota: From Molecular Mechanisms to Personalized Immunometabolic Health

Alhaj, O. A., Elsahoryi, N. A., & Jahrami, H. A. (2026) · Foods · doi:10.3390/foods15112024 · Cited by 1 · see citing works

Recommendations on nutrition to improve cardiovascular health of population of Kyrgyzstan in light of AHA dietary guidance 2021

Esenamanova, M. K., Кочкорова, Ф. А., & Tsivinskaya, T. (2022) · Heart Vessels and Transplantation · doi:10.24969/hvt.2022.304 · Cited by 1 · see citing works

Pan gourmet a base de harina de trigo, linaza y chapulín (Sphenarium purpurascens) como alimento funcional

Galicia, P. F. G., Parola-Contreras, I., González, J. G. B., & Durán-Lugo, R. (2023) · Investigación y Desarrollo en Ciencia y Tecnología de Alimentos · doi:10.29105/idcyta.v8i1.51 · Cited by 1 · see citing works

Diyet Polifenollerinin Bağırsak Mikrobiyotası Üzerindeki Etkisi

Öztürk, M., & YILMAZ, H. Ö. (2024) · Journal of Nutrition and Dietetics · doi:10.33076/2024.bdd.1827 · Cited by 1 · see citing works

Le microbiote, un nouvel outil pour le diagnostic

Clément, K., & Zucker, J. (2021) · Elsevier eBooks · doi:10.1016/b978-2-294-76753-1.00115-6 · Cited by 1 · see citing works

Analysing microbiome intervention studies: Does choice of a statistical method affect biological interpretation?Preprint

Khomich, M., Måge, I., Berget, I., & Rud, I. (2020) · doi:10.21203/rs.3.rs-30540/v1

Malnutrition Accelerates Colorectal Cancer Progression through Macrophage Activated by B Cells Immune via Gut MicrobiotaPreprint

Xu, C., Li, D., Wang, Z., Wang, Y., Xu, L., Haitao, C., Zhang, B., Runzhe, Z., Ju, H., & Qinghua, Y. (2020) · Research Square · doi:10.21203/rs.3.rs-51243/v1

Personalized nutrition

Kaput, J., Monteiro, J. P., Morine, M. J., & Kussmann, M. (2022) · Elsevier eBooks · doi:10.1016/b978-0-12-824010-6.00003-4

Analysing microbiome intervention studies: Does choice of a statistical method affect biological interpretation?

Måge, I., Berget, I., Rud, I., & Khomich, M. (2020) · doi:10.26226/morressier.5f3392ca9d1718ca4c8b2f08

Analysing microbiome intervention studies: Does choice of a statistical method affect biological interpretation?

Khomich, M., Måge, I., & Berget, I. (2020) · doi:10.26226/morressier.5f3288739a6b12016a74ff59

Precision nutrition for cardiometabolic health: insights from human dietary intervention studies

Gijbels, A. (2023) · doi:10.18174/591161

Individual effect of diet on postprandial glycemic response and its relationship with gut microbiome profile in healthy subjects: protocol for a series of randomized N-of-1 trialsPreprint

Zamparette, C. P., Teixeira, B. L., Cruz, G. N. F., Filho, V. B., & de Oliveira, L. F. V. (2023) · medRxiv · doi:10.1101/2023.12.22.23300429

Geriatric Space Travel©

Caswell, G. M. (2024) · International Journal of Geriatrics and Gerontology · doi:10.29011/2577-0748.100075

Diet-Driven Alterations in Gut Microbiota and their Implications for Cancer Therapy: A Review

Raj, S., Hegde, M., Nyamagoud, S. B., Sail, S. S., Patil, C., Kumar, K., & Bohra, N. (2024) · Journal of Young Pharmacists · doi:10.5530/jyp.2024.16.56

Host genetics and microbiota data analysis in colorectal cancer research

González, A., Fullaondo, A., & Odriozola, A. (2024) · Advances in genetics · doi:10.1016/bs.adgen.2024.08.007

Bridging the Gap: Exploring How Fruit and Vegetable Consumption Shapes Gut Microbiota in Prediabetes

Mphasha, M. H. (2024) · IntechOpen eBooks · doi:10.5772/intechopen.114237

Pectin

Tan, H., Yao, H., & Nie, S. (2025) · Elsevier eBooks · doi:10.1016/b978-0-443-21630-5.00003-4

The Role of the Gut Microbiome in Predicting Response to Diet and the Development of Precision Nutrition Models—Part I: Overview of Current Methods

Hughes, R., Marco, M. L., Hughes, J. P., Keim, N. L., & Kable, M. E. (2019) · Advances in Nutrition · doi:10.1093/advances/nmz022 · Cited by 95 · see citing works

Personalized Diets based on the Gut Microbiome as a Target for Health Maintenance: from Current Evidence to Future Possibilities

Song, E., & Shin, J. (2022) · Journal of Microbiology and Biotechnology · doi:10.4014/jmb.2209.09050 · Cited by 61 · see citing works

Diet–microbiome interactions: mechanisms, challenges, and personalized applications—a narrative review

Ramadoss, R. (2026) · Precision Nutrition · doi:10.1097/pn9.0000000000000129 · Cited by 1 · see citing works

The Gut Microbiome and Individual-Specific Responses to Diet

Leshem, A., Segal, E., & Elinav, E. (2020) · mSystems · doi:10.1128/msystems.00665-20 · Cited by 109 · see citing works

Disregulation of iron homeostasis correlates to IMT and FMT changes in patients with obstructive sleep apnea

Manolov, V., Georgiev, O. B., Vasilev, V. V., Grozdanova, R., Gramatikova, Z., Pencheva-Genova, V., Petrova, I., Tzatchev, K., Hadjidekova, S. P., Nikolova, M. H., et al. (2019) · Clinica Chimica Acta · doi:10.1016/j.cca.2019.03.1274