Iron-Responsive Elements: Regulatory RNA Sequences That Control mRNA Levels and Translation
Abstract
The biosynthetic rates for both the transferrin receptor (TfR) and ferritin are regulated by iron. An iron-responsive element (IRE) in the 5′ untranslated portion of the ferritin messenger RNA (mRNA) mediates iron-dependent control of its translation. In this report the 3′ untranslated region of the mRNA for the human TfR was shown to be necessary and sufficient for iron-dependent control of mRNA levels. Deletion studies identified a 678-nucleotide fragment of the TfR complementary DNA that is critical for this iron regulation. Five potential stem-loops that resemble the ferritin IRE are contained within the region critical for TfR regulation. Each of two of the five TfR elements was independently inserted into the 5′ untranslated region of an indicator gene transcript. In this location they conferred iron regulation of translation. Thus, an mRNA element has been implicated in the mediation of distinct regulatory phenomena dependent on the context of the element within the transcript.
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Thermodynamic predictions indicated that the UTR sequences could form stable RNA hairpins with a characteristic secondary structure, termed iron responsive elements (IREs).
“Thermodynamic predictions indicated that the UTR sequences could form stable RNA hairpins with a characteristic secondary structure, termed iron responsive (or regulatory) elements (IREs).24”
From Forging a field: the golden age of iron biology. (2008) · cites this paper as [24]
Levels of accumulation of iron in the striatum of rhesus monkeys were positively correlated with aging-related motor deficits.
“Levels of accumulation of iron in the striatum of rhesus monkeys were positively correlated with aging-related motor deficits (42).”
From Intracellular iron transport and storage: from molecular mechanisms to health implications (2008) · cites this paper as [42]
Monkeys exhibited age-related declines in motor function and dopamine release in the striatum, whereas iron concentration in the striatum increased.
“Monkeys exhibited age-related declines in motor function and dopamine release in the striatum, whereas iron concentration in the striatum increased.”
From Intracellular iron transport and storage: from molecular mechanisms to health implications (2008) · cites this paper as [42]
Iron content was the best predictor of motor deficit.
“Iron content was the best predictor of motor deficit (42).”
From Intracellular iron transport and storage: from molecular mechanisms to health implications (2008) · cites this paper as [42]
Cites
DNA sequencing with chain-terminating inhibitors
Sanger, F., Nicklen, S., & Coulson, A. R. (1977) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.74.12.5463 · Cited by 68,572 · see citing works
Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information
Zuker, M., & Stiegler, P. (1981) · Nucleic Acids Research · doi:10.1093/nar/9.1.133 · Cited by 3,604 · see citing works
Hentze, M. W., Caughman, S. W., Rouault, T. A., Barriocanal, J. G., Dancis, A., Harford, J. B., & Klausner, R. D. (1987) · Science · doi:10.1126/science.3685996 · Cited by 571 · see citing works
Self-citationFerritin: structure, biosynthesis, and role in iron metabolism.
Munro, H. N., & Linder, M. C. (1978) · Physiological Reviews · doi:10.1152/physrev.1978.58.2.317 · Cited by 404 · see citing works
Iron regulates ferritin mRNA translation through a segment of its 5′-untranslated region.
Aziz, N., & Munro, H. N. (1987) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.84.23.8478 · Cited by 368 · see citing works
Primary structure of human transferrin receptor deduced from the mRNA sequence
Schneider, C., Owen, M. J., Banville, D. L., & Williams, J. G. (1984) · Nature · doi:10.1038/311675b0 · Cited by 347 · see citing works
McClelland, A., Kühn, L. C., & Ruddle, F. H. (1984) · Cell · doi:10.1016/0092-8674(84)90004-7 · Cited by 342 · see citing works
Novel mechanism for translational control in regulation of ferritin synthesis by iron.
Zähringer, J., Baliga, B. S., & Munro, H. N. (1976) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.73.3.857 · Cited by 318 · see citing works
Hentze, M. W., Rouault, T. A., Caughman, S. W., Dancis, A., Harford, J. B., & Klausner, R. D. (1987) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.84.19.6730 · Cited by 249 · see citing works
Self-citationGene transfer, expression, and molecular cloning of the human transferrin receptor gene
Kühn, L. C., McClelland, A., & Ruddle, F. H. (1984) · Cell · doi:10.1016/0092-8674(84)90304-0 · Cited by 227 · see citing works
Noncoding 3′ sequences of the transferrin receptor gene are required for mRNA regulation by iron.
Owen, D., & Kühn, L. C. (1987) · The EMBO Journal · doi:10.1002/j.1460-2075.1987.tb02366.x · Cited by 223 · see citing works
Regulation of HeLa cell transferrin receptors.
Ward, J. H., Kushner, J. P., & Kaplan, J. (1982) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)34022-5 · Cited by 182 · see citing works
Rogers, J. T., & Munro, H. N. (1987) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.84.8.2277 · Cited by 162 · see citing works
Both subunits of rat liver ferritin are regulated at a translational level by iron induction
Aziz, N., & Munro, H. N. (1986) · Nucleic Acids Research · doi:10.1093/nar/14.2.915 · Cited by 161 · see citing works
Biosynthetic regulation of the human transferrin receptor by desferrioxamine in K562 cells.
Mattia, E. D., Rao, K., Shapiro, D. S., Sussman, H. H., & Klausner, R. D. (1984) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)43197-8 · Cited by 143 · see citing works
Self-citationSecretion of endogenous and exogenous proteins from polarized MDCK cell monolayers.
Gottlieb, T. A., Beaudry, G. A., Rizzolo, L. J., et al. (1986) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.83.7.2100 · Cited by 136 · see citing works
Transcriptional Regulation by Iron of the Gene for the Transferrin Receptor
Rao, K., Harford, J. B., Rouault, T. A., McClelland, A., Ruddle, F. H., & Klausner, R. D. (1986) · Molecular and Cellular Biology · doi:10.1128/mcb.6.1.236 · Cited by 128 · see citing works
Self-citationStructure of gene and pseudogenes of human apoferritin H
Costanzo, F. S., Colombo, M. P., Staempfli, S., Santoro, C., Marone, M., Frank, R., Delius, H., & Cortese, R. (1986) · Nucleic Acids Research · doi:10.1093/nar/14.2.721 · Cited by 126 · see citing works
Effects of Alterations in Cellular Iron on Biosynthesis of the Transferrin Receptor in K562 Cells
Rao, K. K., Shapiro, D. S., Mattia, E. D., Bridges, K. R., & Klausner, R. E. (1985) · Molecular and Cellular Biology · doi:10.1128/mcb.5.4.595 · Cited by 111 · see citing works
Self-citationMurray, M. T., White, K., & Munro, H. N. (1987) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.84.21.7438 · Cited by 109 · see citing works
Cloning of the gene coding for human L apoferritin
Santoro, C., Marone, M., Ferrone, M., Costanzo, F. S., Colombo, M., Minganti, C., Cortese, R., & Silengo, L. (1986) · Nucleic Acids Research · doi:10.1093/nar/14.7.2863 · Cited by 101 · see citing works
Leibold, E. A., & Munro, H. N. (1987) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)48241-5 · Cited by 95 · see citing works
Casey, J. L., Jeso, B. D., Rao, K., Klausner, R. D., & Harford, J. B. (1988) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.85.6.1787 · Cited by 92 · see citing works
Self-citationStructure and expression of the chicken ferritin H-subunit gene.
Stevens, P. W., Dodgson, J. B., & Engel, J. D. (1987) · Molecular and Cellular Biology · doi:10.1128/mcb.7.5.1751 · Cited by 84 · see citing works
Hentze, M. W., Keim, S., Papadopoulos, P., O'Brien, S., Modi, W., Drysdale, J., Leonard, W. J., Harford, J. B., & Klausner, R. D. (1986) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.83.19.7226 · Cited by 79 · see citing works
Self-citationStudies of the ATP-dependent proteolytic enzyme, protease La, from Escherichia coli.
Larimore, F., Waxman, L., & Goldberg, A. L. (1982) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)34704-5 · Cited by 78 · see citing works
Didsbury, J. R., Theil, E. C., Kaufman, R. E., & Dickey, L. F. (1986) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)36189-6 · Cited by 66 · see citing works
Influence of altered transcription on the translational control of human ferritin expression.
Rouault, T. A., Hentze, M. W., Dancis, A., Caughman, W., Harford, J. B., & Klausner, R. D. (1987) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.84.18.6335 · Cited by 62 · see citing works
Self-citationIsolation of cDNA clones for the human transferrin receptor.
Schneider, C., Kurkinen, M. T., & Greaves, M. F. (1983) · The EMBO Journal · doi:10.1002/j.1460-2075.1983.tb01732.x · Cited by 47 · see citing works
Shull, G. E., & Theil, E. C. (1983) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(20)82005-5 · Cited by 46 · see citing works
Hemin regulates the expression of transferrin receptors in human hematopoietic cell lines
Pelicci, P. G., Tabilio, A., THOMOPOULOS, P., Titeux, M., Vainchenker, W., Rochant, H., & Testa, U. (1982) · FEBS Letters · doi:10.1016/0014-5793(82)80198-1 · Cited by 45 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Cloning and characterization of a mammalian proton-coupled metal-ion transporter
Gunshin, H., Mackenzie, B., Berger, U. V., Gunshin, Y., Romero, M. F., Boron, W. F., Nussberger, S., Gollan, J. L., & Hediger, M. A. (1997) · Nature · doi:10.1038/41343 · Cited by 3,166 · see citing works
The ferritins: molecular properties, iron storage function and cellular regulation
Harrison, P. M., & Arosio, P. (1996) · Biochimica et Biophysica Acta (BBA) - Bioenergetics · doi:10.1016/0005-2728(96)00022-9 · Cited by 2,667 · see citing works
Regulation of ferritin genes and protein
Torti, F. M., & Torti, S. V. (2002) · Blood · doi:10.1182/blood.v99.10.3505 · Cited by 1,173 · see citing works
Dexter, D. T., Wells, F. R., Lee, A. J., Agid, F., Agid, Y., Jenner, P., & Marsden, C. D. (1989) · Journal of Neurochemistry · doi:10.1111/j.1471-4159.1989.tb07264.x · Cited by 1,149 · see citing works
NFS1 undergoes positive selection in lung tumours and protects cells from ferroptosis
Alvarez, S. W., Sviderskiy, V. O., Terzi, E. M., Papagiannakopoulos, T., Moreira, A. L., Adams, S., Sabatini, D. M., Birsoy, K., & Possemato, R. (2017) · Nature · doi:10.1038/nature24637 · Cited by 787 · see citing works
Forging a field: the golden age of iron biology.
Andrews, N. C. (2008) · Blood · doi:10.1182/blood-2007-12-077388 · Cited by 623 · see citing works
Intracellular iron transport and storage: from molecular mechanisms to health implications
Mackenzie, E. L., Iwasaki, K., & Tsuji, Y. (2008) · Antioxidants & Redox Signaling · doi:10.1089/ars.2007.1893 · Cited by 526 · see citing works
Mammalian iron metabolism and its control by iron regulatory proteins
Anderson, C. P., Shen, M., Eisenstein, R. S., & Leibold, E. A. (2012) · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research · doi:10.1016/j.bbamcr.2012.05.010 · Cited by 493 · see citing works
Brain iron and ferritin in Parkinson’s and Alzheimer’s diseases
Jellinger, K., Paulus, W., Grundke-Iqbal, I., Riederer, P., & Youdim, M. B. H. (1990) · Journal of Neural Transmission - Parkinson's Disease and Dementia Section · doi:10.1007/bf02252926 · Cited by 445 · see citing works
Hubert, N., & Hentze, M. W. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.192423399 · Cited by 428 · see citing works
Self-citationBiosynthesis of nitric oxide activates iron regulatory factor in macrophages.
Drapier, J. C., Hirling, H., Wietzerbin, J., Kaldy, P., & Kühn, L. C. (1993) · The EMBO Journal · doi:10.1002/j.1460-2075.1993.tb06038.x · Cited by 401 · see citing works
Translational regulation via iron‐responsive elements by the nitric oxide/NO‐synthase pathway.
Weiss, G., Goossen, B., Doppler, W., Fuchs, D., Pantopoulos, K., Werner‐Felmayer, G., Wachter, H., & Hentze, M. W. (1993) · The EMBO Journal · doi:10.1002/j.1460-2075.1993.tb06039.x · Cited by 389 · see citing works
Self-citationThe IRP/IRE system in vivo: insights from mouse models
Wilkinson, N., & Pantopoulos, K. (2014) · Frontiers in Pharmacology · doi:10.3389/fphar.2014.00176 · Cited by 366 · see citing works
Binding of a Cytosolic Protein to the Iron-Responsive Element of Human Ferritin Messenger RNA
Rouault, T. A., Hentze, M. W., Caughman, S. W., Harford, J. B., & Klausner, R. D. (1988) · Science · doi:10.1126/science.3413484 · Cited by 351 · see citing works
Self-citationIron-dependent regulation of the divalent metal ion transporter
Gunshin, H., Allerson, C. R., Polycarpou-Schwarz, M., Rofts, A., Rogers, J. T., Kishi, F., Hentze, M. W., Rouault, T. A., Andrews, N. C., & Hediger, M. A. (2001) · FEBS Letters · doi:10.1016/s0014-5793(01)03189-1 · Cited by 305 · see citing works
Self-citationMolecular control of vertebrate iron homeostasis by iron regulatory proteins
Wallander, M. L., Leibold, E. A., & Eisenstein, R. S. (2006) · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research · doi:10.1016/j.bbamcr.2006.05.004 · Cited by 287 · see citing works
Iron–sulfur proteins with nonredox functions
Flint, D. H., & Allen, R. M. (1996) · Chemical Reviews · doi:10.1021/cr950041r · Cited by 280 · see citing works
Gray, N. K., & Hentze, M. W. (1994) · The EMBO Journal · doi:10.1002/j.1460-2075.1994.tb06699.x · Cited by 276 · see citing works
Self-citationLiving with Iron (and Oxygen): Questions and Answers about Iron Homeostasis
Theil, E. C., & Goss, D. J. (2009) · Chemical Reviews · doi:10.1021/cr900052g · Cited by 265 · see citing works
Chapter 17 Messenger RNA Half‐Life Measurements in Mammalian Cells
Chen, C. A., Ezzeddine, N., & Shyu, A. (2008) · Methods in Enzymology · doi:10.1016/s0076-6879(08)02617-7 · Cited by 256 · see citing works
Decreased ferritin levels in brain in Parkinson's disease
Dexter, D. T., Carayon, A., Vidailhet, M., Ruberg, M., Agid, F., Agid, Y., Lees, A. J., Wells, F. R., Jenner, P., & Marsden, C. D. (1990) · Journal of Neurochemistry · doi:10.1111/j.1471-4159.1990.tb08814.x · Cited by 258 · see citing works
Molecular mechanisms involved in intestinal iron absorption
Sharp, P. (2007) · World Journal of Gastroenterology · doi:10.3748/wjg.v13.i35.4716 · Cited by 205 · see citing works
Pantopoulos, K., Weiss, G., & Hentze, M. W. (1996) · Molecular and Cellular Biology · doi:10.1128/mcb.16.7.3781 · Cited by 195 · see citing works
Self-citationWang, X., Kiledjian, M., Weiss, I. M., & Liebhaber, S. A. (1995) · Molecular and Cellular Biology · doi:10.1128/mcb.15.3.1769 · Cited by 192 · see citing works
Byrd, T. F., & Horwitz, M. A. (1993) · Journal of Clinical Investigation · doi:10.1172/jci116318 · Cited by 149 · see citing works
Goossen, B., Caughman, S. W., Harford, J. B., Klausner, R. D., & Hentze, M. W. (1990) · The EMBO Journal · doi:10.1002/j.1460-2075.1990.tb07635.x · Cited by 144 · see citing works
Self-citationA model for the structure and functions of iron-responsive elements
Hentze, M. W., Caughman, S. W., Casey, J. L., Kodier, D. M., Rouault, T. A., Harford, J. B., & Klausner, R. D. (1988) · Gene · doi:10.1016/0378-1119(88)90145-x · Cited by 116 · see citing works
Self-citationZoller, H., Theurl, I., Koch, R., Kaser, A., & Weiss, G. (2002) · Blood Cells, Molecules, and Diseases · doi:10.1006/bcmd.2002.0587 · Cited by 106 · see citing works
Tsuji, Y., Miller, L. L., Miller, S. C., Torti, S. V., & Torti, F. M. (1991) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(20)89638-0 · Cited by 103 · see citing works
Mitochondrial Mayhem: The Mitochondrion as a Modulator of Iron Metabolism and Its Role in Disease
Huang, M. L.-H., Lane, D. J. R., & Richardson, D. R. (2011) · Antioxidants & Redox Signaling · doi:10.1089/ars.2011.3921 · Cited by 103 · see citing works
Caughman, S. W., Hentze, M. W., Rouault, T. A., Harford, J. B., & Klausner, R. D. (1988) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)37387-3 · Cited by 85 · see citing works
Self-citationThe role of iron in tumour cell proliferation
Steegmann-Olmedillas, J. L. (2011) · Clinical and Translational Oncology · doi:10.1007/s12094-011-0621-1 · Cited by 84 · see citing works
- Authors
- Casey, J. L., Hentze, M. W., Koeller, D. M., Caughman, S. W., Rouault, T. A., Klausner, R. D., & Harford, J. B.
- Affiliations
- National Institutes of Health (US)
- Venue
- Science
- Published
- 1988-05-13
- Volume
- 240
- Issue
- 4854
- Pages
- 924-928
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- OpenAlex
- W1999347013
- Cited by
- 709
- References
- 31
- Citations by year
- 2026: 8 · 2025: 17 · 2024: 10 · 2023: 14 · 2022: 8 · 2021: 15 · 2020: 6 · 2019: 6 · 2018: 15 · 2017: 6 · 2016: 12 · 2015: 9 · 2014: 16 · 2013: 11 · 2012: 11
- FWCI
- 31.56
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Science (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Health Sciences › Medicine › Hematology › Iron Metabolism and Disorders
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA and protein synthesis mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Research and Splicing
- Keywords
- iron-responsive element, transferrin receptor, ferritin, iron regulation, mRNA stability, translational regulation, 3' untranslated region, 5' untranslated region, stem-loop structure, post-transcriptional regulation, iron homeostasis
- MeSH terms
- Animals, Base Sequence, DNA, DNA, Recombinant, Ferritins, Humans, Iron, Plasmids, Receptors, Transferrin, Regulatory Sequences, Nucleic Acid, RNA, RNA, Messenger, Growth Hormone, Transcription, Genetic, Transfection, Transformation, Genetic, Protein Biosynthesis, Mice
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