Check biochemistry, genetics and molecular biology papers: citations, claims and retractions

AQUA and PROCHECK-NMR: Programs for checking the quality of protein structures solved by NMR

Laskowski, R., Rullmann, J. A., MacArthur, M., Kaptein, R., & Thornton, J. (1996) · Journal of Biomolecular NMR

Protein Structure and DynamicsAdvanced NMR Techniques and Applications

Cited by 5,502

The Inflammasomes

Schroder, K., & Tschopp, J. (2010) · Cell

Inflammasome and immune disordersImmune Response and Inflammation

Cited by 5,475

Molecular mechanisms and clinical applications of angiogenesis

Carmeliet, P., & Jain, R. K. (2011) · Nature

Angiogenesis and VEGF in CancerLymphatic System and Diseases

Cited by 5,467

Regulation of microRNA biogenesis

Ha, M., & Kim, V. N. (2014) · Nature Reviews Molecular Cell Biology

MicroRNA in disease regulationRNA regulation and disease

Cited by 5,462

Mutational heterogeneity in cancer and the search for new cancer-associated genes

Lawrence, M. S., Stojanov, P., Polak, P., Kryukov, G. V., Cibulskis, K., Sivachenko, A., Carter, S. L., Stewart, C., Mermel, C. H., Roberts, S. A., et al. (2013) · Nature

Cancer Genomics and DiagnosticsChromatin Remodeling and Cancer

Cited by 5,461

Targeting cancer cells by ROS-mediated mechanisms: a radical therapeutic approach?

Trachootham, D., Alexandre, J., & Huang, P. (2009) · Nature Reviews Drug Discovery

Redox biology and oxidative stressCancer and biochemical research

Cited by 5,452

RELION: Implementation of a Bayesian approach to cryo-EM structure determination

Scheres, S. H. W. (2012) · Journal of Structural Biology

Advanced Electron Microscopy Techniques and ApplicationsEnzyme Structure and Function

Cited by 5,446

Stochastic Gene Expression in a Single Cell

Elowitz, M. B., Levine, A. J., Siggia, E. D., & Swain, P. S. (2002) · Science

Gene Regulatory Network Analysisstochastic dynamics and bifurcation

Cited by 5,441

Oxidative stress, inflammation, and cancer: How are they linked?

Reuter, S., Gupta, S. C., Chaturvedi, M. M., & Aggarwal, B. B. (2010) · Free Radical Biology and Medicine

Redox biology and oxidative stressAntioxidant Activity and Oxidative Stress

Cited by 5,441

Base-Calling of Automated Sequencer Traces Using Phred. II. Error Probabilities

Ewing, B., & Green, P. (1998) · Genome Research

Genomics and Phylogenetic StudiesFractal and DNA sequence analysis

Cited by 5,439

Osteoprotegerin ligand is a cytokine that regulates osteoclast differentiation and activation.

Lacey, D. L., Timms, E., Tan, H.-L., Kelley, M. J., Dunstan, C. R., Burgess, T., Elliott, R., Colombero, A., Elliott, G., Scully, S., et al. (1998) · Cell

Bone Metabolism and DiseasesRheumatoid Arthritis Research and Therapies

Cited by 5,439

DNA double-stranded breaks induce histone H2AX phosphorylation on serine 139

Rogakou, E. P., Pilch, D. R., Orr, A. H., Ivanova, V. S., & Bonner, W. M. (1998) · Journal of Biological Chemistry

DNA Repair MechanismsEffects of Radiation Exposure

Cited by 5,438

Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage

Komor, A. C., Kim, Y. B., Packer, M. S., Zuris, J. A., & Liu, D. R. (2016) · Nature

CRISPR and Genetic EngineeringRNA regulation and disease

Cited by 5,437

Revised Estimates for the Number of Human and Bacteria Cells in the Body

Sender, R., Fuchs, S., & Milo, R. (2016) · PLOS Biology

Gut microbiota and healthMicrobial Community Ecology and Physiology

Cited by 5,425

The Microbial Metabolites, Short-Chain Fatty Acids, Regulate Colonic T reg Cell Homeostasis

Smith, P. M., Howitt, M. R., Panikov, N., Michaud, M., Gallini, C. A., Bohlooly-Y, M., Glickman, J. N., & Garrett, W. S. (2013) · Science

Gut microbiota and healthT-cell and B-cell Immunology

Cited by 5,413

Comparison of the predicted and observed secondary structure of T4 phage lysozyme

Matthews, B. W. (1975) · Biochimica et Biophysica Acta (BBA) - Protein Structure

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 5,399

Regulation of the mevalonate pathway

Goldstein, J. L., & Brown, M. S. (1990) · Nature

Cholesterol and Lipid MetabolismCancer, Lipids, and Metabolism

Cited by 5,394

Role of the microbiota in immunity and inflammation.

Belkaid, Y., & Hand, T. W. (2014) · Cell

Gut microbiota and healthImmune Response and Inflammation

Cited by 5,385

Mitochondrial Reactive Oxygen Species (ROS) and ROS-Induced ROS Release

Zorov, D. B., Juhaszova, M., & Sollott, S. J. (2014) · Physiological Reviews

Mitochondrial Function and PathologyCell death mechanisms and regulation

Cited by 5,383

Prions

Prusiner, S. B. (1998) · Proceedings of the National Academy of Sciences

Prion Diseases and Protein MisfoldingAlzheimer's disease research and treatments

Cited by 5,373

Proposed minimum reporting standards for chemical analysis: Chemical Analysis Working Group (CAWG) Metabolomics Standards Initiative (MSI)

Sumner, L. W., Amberg, A., Barrett, D., Beale, M. H., Beger, R., Daykin, C. A., Fan, T. W.-M., Fiehn, O., Goodacre, R., Griffin, J. L., et al. (2007) · Metabolomics

Metabolomics and Mass Spectrometry StudiesAdvanced Proteomics Techniques and Applications

Cited by 5,368

A bivalent chromatin structure marks key developmental genes in embryonic stem cells

Bernstein, B. E., Mikkelsen, T. S., Xie, X., Kamal, M., Huebert, D. J., Cuff, J., Fry, B., Meissner, A., Wernig, M., Plath, K., et al. (2006) · Cell

Epigenetics and DNA MethylationGenomics and Chromatin Dynamics

Cited by 5,361

Inflamm‐aging: An Evolutionary Perspective on Immunosenescence

FRANCESCHI, C., BONAFÈ, M., VALENSIN, S., OLIVIERI, F., DE LUCA, M., OTTAVIANI, E., & DE BENEDICTIS, G. (2000) · Annals of the New York Academy of Sciences

Genetics, Aging, and Longevity in Model OrganismsImmune Response and Inflammation

Cited by 5,358

Dimensionality reduction for visualizing single-cell data using UMAP

Becht, E., McInnes, L., Healy, J., Dutertre, C.-A., Kwok, I. W. H., Ng, L. G., Ginhoux, F., & Newell, E. W. (2019) · Nature Biotechnology

Single-cell and spatial transcriptomicsFace and Expression Recognition

Cited by 5,358