AU-rich elements: characterization and importance in mRNA degradation
Abstract
Adenylate/uridylate-rich elements (AREs) are found in the 3' untranslated region (UTR) of many messenger RNAs (mRNAs) that code for proto-oncogenes, nuclear transcription factors and cytokines. They represent the most common determinant of RNA stability in mammalian cells. Moreover, ARE-directed mRNA degradation is influenced by many exogenous factors, including phorbol esters, calcium ionophores, cytokines and transcription inhibitors. These observations suggest that AREs play a critical role in the regulation of gene expression during cell growth and differentiation, and in the immune response.
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Inserting AU-rich regions into 3′-UTRs ensures fast mRNA breakdown and a short duration of protein expression.
“This effect can be achieved by inserting AU-rich regions into 3′-UTRs ensuring fast mRNA breakdown and a short duration of protein expression (Chen and Shyu 1995).”
From Modifications of mRNA vaccine structural elements for improving mRNA stability and translation efficiency (2022) · cites this paper as Chen and Shyu 1995
A 3′UTR participates in alternative cleavage and polyadenylation, translation, and localization of mRNA, affecting mRNA stability.
“A 3′UTR participates in such processes as alternative cleavage and polyadenylation, translation, and localization of mRNA [19], affecting mRNA stability [20].”
From Effects of Combinations of Untranslated-Region Sequences on Translation of mRNA (2023) · cites this paper as [20]
Engineered UTR sequences minimize mRNA degradation by excluding miRNA-binding sites and AU-rich regions in the 3′ UTR.
“These engineered UTR sequences minimize mRNA degradation by excluding miRNA-binding sites11 and AU-rich regions in the 3′ UTR19.”
From mRNA vaccines for infectious diseases: principles, delivery and clinical translation (2021) · cites this paper as [19]
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The plasminogen activator system: biology and regulation
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Identification of a Human Decapping Complex Associated with hUpf Proteins in Nonsense-Mediated Decay
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Recognition of the mRNA AU-rich element by the zinc finger domain of TIS11d
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The mammalian exosome mediates the efficient degradation of mRNAs that contain AU‐rich elements
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Multiple modes of RNA recognition by zinc finger proteins
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Self-citationStabilization of Interleukin-2 mRNA by the c-Jun NH 2 -Terminal Kinase Pathway
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Self-citationMessenger RNA Turnover in Eukaryotes: Pathways and Enzymes
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Mouse glucocorticoid-induced tumor necrosis factor receptor ligand is costimulatory for T cells
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Evolution and Biological Roles of Alternative 3′UTRs
Mayr, C. (2015) · Trends in Cell Biology · doi:10.1016/j.tcb.2015.10.012 · Cited by 329 · see citing works
Mechanisms of deadenylation‐dependent decay
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Self-citationLife and death in the cytoplasm: messages from the 3′ end
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HuR binding to cytoplasmic mRNA is perturbed by heat shock
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ARED 3.0: the large and diverse AU-rich transcriptome
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Post‐transcriptional regulation of gene expression by degradation of messenger RNAs
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Control of messenger RNA stability in higher eukaryotes
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The urokinase plasminogen activator system: a target for anti-cancer therapy
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Cytoplasmic Polyadenylation in Development and Beyond
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Identification of HuR as a protein implicated in AUUUA‐mediated mRNA decay
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New insights into the molecular mechanism of interleukin-10-mediated immunosuppression
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A Mechanism for Translationally Coupled mRNA Turnover
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Why is Hu where? Shuttling of early-response-gene messenger RNA subsets
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Self-citation
- Authors
- Chen, C.-Y. A., & Shyu, A.-B.
- Affiliations
- The University of Texas Health Science Center at Houston (US)
- Venue
- Trends in Biochemical Sciences
- Publisher
- Elsevier BV
- Published
- 1995-11
- Volume
- 20
- Issue
- 11
- Pages
- 465-470
- ISSN
- 0968-0004 (ISSN-L)
- OpenAlex
- W2029706883
- Cited by
- 1,948
- References
- 38
- Citations by year
- 2026: 13 · 2025: 29 · 2024: 28 · 2023: 33 · 2022: 36 · 2021: 36 · 2020: 49 · 2019: 32 · 2018: 52 · 2017: 33 · 2016: 33 · 2015: 52 · 2014: 61 · 2013: 68 · 2012: 63
- FWCI
- 4.31
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Trends in Biochemical Sciences (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Institute of General Medical Sciences (R01GM046454, GM-46454)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Research and Splicing
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA regulation and disease
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA and protein synthesis mechanisms
- Keywords
- AU-rich elements, mRNA degradation, 3' untranslated region, RNA stability, proto-oncogenes, transcription factors, cytokines, phorbol ester, calcium ionophore, gene expression regulation, cell growth and differentiation, immune response
- MeSH terms
- Adenine, Animals, Base Composition, Gene Expression Regulation, RNA, Messenger, Transcription, Genetic, Protein Biosynthesis, Uracil, Signal Transduction, RNA-Binding Proteins, Conserved Sequence
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