How to correct susceptibility distortions in spin-echo echo-planar images: application to diffusion tensor imaging
Abstract
Diffusion tensor imaging is often performed by acquiring a series of diffusion-weighted spin-echo echo-planar images with different direction diffusion gradients. A problem of echo-planar images is the geometrical distortions that obtain near junctions between tissues of differing magnetic susceptibility. This results in distorted diffusion-tensor maps. To resolve this we suggest acquiring two images for each diffusion gradient; one with bottom-up and one with top-down traversal of k-space in the phase-encode direction. This achieves the simultaneous goals of providing information on the underlying displacement field and intensity maps with adequate spatial sampling density even in distorted areas. The resulting DT maps exhibit considerably higher geometric fidelity, as assessed by comparison to an image volume acquired using a conventional 3D MR technique.
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All data sets were corrected for head motion, eddy currents and susceptibility distortions and are, in general, of very high quality.
“All data sets were corrected for head motion, eddy currents and susceptibility distortions and are, in general, of very high quality69–73.”
From Tractography-based connectomes are dominated by false-positive connections (2016) · cites this paper as [70]
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A cross‐comparative analysis of in vivo versus ex vivo MRI indices in a mouse model of concussion
Vinh To, X., Kurniawan, N. D., Cumming, P., & Nasrallah, F. A. (2023) · Brain Research · doi:10.1016/j.brainres.2023.148562 · Cited by 5 · see citing works
Scattered slice shard reconstruction for motion correction in multi-shell diffusion MRI
Christiaens, D., Cordero-Grande, L., Pietsch, M., Hutter, J., Price, A. N., Hughes, E. J., Vecchiato, K., Deprez, M., Edwards, A. D., Hajnal, J. V., et al. (2021) · NeuroImage · doi:10.1016/j.neuroimage.2020.117437 · Cited by 4 · see citing works
- Authors
- Andersson, J. L. R., Skare, S., & Ashburner, J.
- Affiliations
- Karolinska Institutet (SE)
- Wellcome Trust (GB)
- Corresponding author
- Andersson, Jesper L.R.
- Venue
- NeuroImage
- Publisher
- Elsevier BV
- Published
- 2003-10
- Volume
- 20
- Issue
- 2
- Pages
- 870-888
- ISSN
- 1053-8119 (ISSN-L)
- OpenAlex
- W1984453610
- Cited by
- 3,469
- References
- 42
- Citations by year
- 2026: 331 · 2025: 440 · 2024: 433 · 2023: 356 · 2022: 361 · 2021: 349 · 2020: 313 · 2019: 247 · 2018: 184 · 2017: 119 · 2016: 95 · 2015: 69 · 2014: 45 · 2013: 34 · 2012: 21
- FWCI
- 4.55
- Type
- journal article
- Language
- en
- Open access
- closed
- Licence
- Locations
- NeuroImage (publishedVersion)
- PubMed (publishedVersion)
- UCL Discovery (University College London) (submittedVersion)
- Funders
- Vetenskapsrådet (621-2001-2844)
- Topics
- Health Sciences › Medicine › Radiology, Nuclear Medicine and Imaging › Advanced Neuroimaging Techniques and Applications
- Health Sciences › Medicine › Radiology, Nuclear Medicine and Imaging › Advanced MRI Techniques and Applications
- Physical Sciences › Physics and Astronomy › Nuclear and High Energy Physics › NMR spectroscopy and applications
- Keywords
- diffusion tensor imaging, spin-echo echo-planar imaging, displacement field, diffusion-weighted imaging, geometric distortion correction
- MeSH terms
- Algorithms, Brain, Brain Mapping, Humans, Image Processing, Computer-Assisted, Magnetic Resonance Imaging, Models, Statistical, Echo-Planar Imaging
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