Cited by 371Mass Spectrometry Techniques and ApplicationsAdvanced Proteomics Techniques and ApplicationsMetabolomics and Mass Spectrometry Studies

Complete Protein Characterization Using Top-Down Mass Spectrometry and Ultraviolet Photodissociation

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Shaw, Jared B., Li, Wenzong, Holden, Dustin D., Zhang, Yan, Griep-Raming, Jens, Fellers, Ryan T., Early, Bryan P., Thomas, Paul M. +2 more·2013·Journal of the American Chemical Society

Abstract

The top-down approach to proteomics offers compelling advantages due to the potential to provide complete characterization of protein sequence and post-translational modifications. Here we describe the implementation of 193 nm ultraviolet photodissociation (UVPD) in an Orbitrap mass spectrometer for characterization of intact proteins. Near-complete fragmentation of proteins up to 29 kDa is achieved with UVPD including the unambiguous localization of a single residue mutation and several protein modifications on Pin1 (Q13526), a protein implicated in the development of Alzheimer's disease and in cancer pathogenesis. The 5 ns, high-energy activation afforded by UVPD exhibits far less precursor ion-charge state dependence than conventional collision- and electron-based dissociation methods.

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  1. [35]Ping Lu K Hanes SD Hunter T Nature 1996 380 544 547 8606777

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Authors
Shaw, J. B., Li, W., Holden, D. D., Zhang, Y., Griep-Raming, J., Fellers, R. T., Early, B. P., Thomas, P. M., Kelleher, N. L., & Brodbelt, J. S.
Affiliations
  • The University of Texas at Austin (US)
  • Thermo Fisher Scientific GmbH, 28199 Bremen, Germany
  • Northwestern University (US)
Corresponding author
Brodbelt, Jennifer S.
Venue
Journal of the American Chemical Society
Published
2013-06-04
Volume
135
Issue
34
Pages
12646-12651
ISSN
  • 0002-7863 (ISSN-L)
  • 1520-5126
OpenAlex
W1969050666
Cited by
371
References
40
Citations by year
2026: 21 · 2025: 11 · 2024: 24 · 2023: 27 · 2022: 24 · 2021: 25 · 2020: 31 · 2019: 29 · 2018: 35 · 2017: 42 · 2016: 29 · 2015: 27 · 2014: 34 · 2013: 10
FWCI
14.98
Type
journal article
Language
en
Open access
Locations
  • Journal of the American Chemical Society (publishedVersion)
  • PubMed (publishedVersion)
  • PubMed Central (acceptedVersion)
Funders
National Institute of General Medical Sciences (R01GM067193, GM 067193)
Topics
  • Physical Sciences › Chemistry › Spectroscopy › Mass Spectrometry Techniques and Applications
  • Physical Sciences › Chemistry › Spectroscopy › Advanced Proteomics Techniques and Applications
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Metabolomics and Mass Spectrometry Studies
Keywords
top-down proteomics, ultraviolet photodissociation, protein fragmentation, post-translational modification, Pin1, site-directed mutagenesis, 193 nm photodissociation, charge state dependence, Alzheimer's disease
MeSH terms
NIMA-Interacting Peptidylprolyl Isomerase, Humans, Models, Molecular, Mass Spectrometry, Ultraviolet Rays, Peptidylprolyl Isomerase, Proteomics, Photochemical Processes

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