The R Package geepack for Generalized Estimating Equations

Review of Software to Fit Generalized Estimating Equation Regression Models

Horton, N. J., & Lipsitz, S. R. (1999) · The American Statistician · doi:10.1080/00031305.1999.10474451 · Cited by 387

The composition and stability of the vaginal microbiota of normal pregnant women is different from that of non-pregnant women

Romero, R., Hassan, S. S., Gajer, P., Tarca, A. L., Fadrosh, D. W., Nikita, L., Galuppi, M., Lamont, R. F., Chaemsaithong, P., Miranda, J., et al. (2014) · Microbiome · doi:10.1186/2049-2618-2-4 · Cited by 852

Duration and key determinants of infectious virus shedding in hospitalized patients with coronavirus disease-2019 (COVID-19)

van Kampen, J. J. A., van de Vijver, D. A. M. C., Fraaij, P. L. A., Haagmans, B. L., Lamers, M. M., Okba, N., van den Akker, J. P. C., Endeman, H., Gommers, D. A. M. P. J., Cornelissen, J. J., et al. (2021) · Nature Communications · doi:10.1038/s41467-020-20568-4 · Cited by 838

A practical solution to pseudoreplication bias in single-cell studies

Zimmerman, K. D., Espeland, M. A., & Langefeld, C. D. (2021) · Nature Communications · doi:10.1038/s41467-021-21038-1 · Cited by 356

DNA methylation as a mediator of the association between prenatal adversity and risk factors for metabolic disease in adulthood

Tobi, E. W., Slieker, R. C., Luijk, R., Dekkers, K. F., Stein, A. D., Xu, K. M., Biobank-based Integrative Omics Studies Consortium, Slagboom, P. E., van Zwet, E. W., Lumey, L. H., et al. (2018) · Science Advances · doi:10.1126/sciadv.aao4364 · Cited by 284

A genome-wide association meta-analysis of self-reported allergy identifies shared and allergy-specific susceptibility loci

Hinds, D. A., McMahon, G., Kiefer, A. K., Do, C. B., Eriksson, N., Evans, D. M., St Pourcain, B., Ring, S. M., Mountain, J. L., Francke, U., et al. (2013) · Nature Genetics · doi:10.1038/ng.2686 · Cited by 246

Review of recent methodological developments in group-randomized trials: part 2—analysis

Turner, E. L., Prague, M., Gallis, J. A., Li, F., & Murray, D. M. (2017) · American Journal of Public Health · doi:10.2105/ajph.2017.303707 · Cited by 195

Nirmatrelvir Plus Ritonavir for Early COVID-19 in a Large U.S. Health System: A Population-Based Cohort Study

Dryden-Peterson, S., Kim, A., Kim, A. Y., Caniglia, E. C., Lennes, I. T., Patel, R., Gainer, L., Dutton, L., Donahue, E., Gandhi, R. T., et al. (2023) · Annals of Internal Medicine · doi:10.7326/m22-2141 · Cited by 182

Alternative Models for Small Samples in Psychological Research: Applying Linear Mixed Effects Models and Generalized Estimating Equations to Repeated Measures Data

Muth, C., Bales, K. L., Hinde, K., Maninger, N., Mendoza, S. P., & Ferrer, E. (2016) · Educational and Psychological Measurement · doi:10.1177/0013164415580432 · Cited by 165

Assessing habitat connectivity for ground‐dwelling animals in an urban environment

Braaker, S., Moretti, M., Boesch, R., Ghazoul, J., Obrist, M. K., & Bontadina, F. (2014) · Ecological Applications · doi:10.1890/13-1088.1 · Cited by 121

Antimicrobial de-escalation in the critically ill patient and assessment of clinical cure: The DIANA study.

De Bus, L., Depuydt, P., Steen, J., Dhaese, S., De Smet, K., Tabah, A., Akova, M., Cotta, M. O., De Pascale, G., Dimopoulos, G., et al. (2020) · Intensive Care Medicine · doi:10.1007/s00134-020-06111-5 · Cited by 114

Comparison of Smartphone‐Based Behavioral Obesity Treatment With Gold Standard Group Treatment and Control: A Randomized Trial

Thomas, J. G., Bond, D. S., Raynor, H. A., Papandonatos, G. D., & Wing, R. R. (2019) · Obesity · doi:10.1002/oby.22410 · Cited by 108

Persistence of Antibodies to Severe Acute Respiratory Syndrome Coronavirus 2 in Relation to Symptoms in a Nationwide Prospective Study

den Hartog, G., Vos, E. R. A., van den Hoogen, L. L., van Boven, M., Schepp, R. M., Smits, G., van Vliet, J., Woudstra, L., Wijmenga-Monsuur, A. J., van Hagen, C. C. E., et al. (2021) · Clinical Infectious Diseases · doi:10.1093/cid/ciab172 · Cited by 92

Tau Reduction Prevents Key Features of Autism in Mouse Models

Tai, C., Chang, C.-W., Yu, G.-Q., Lopez, I., Yu, X., Wang, X., Guo, W., & Mucke, L. (2020) · Neuron · doi:10.1016/j.neuron.2020.01.038 · Cited by 96

Deceleration, Acceleration, and Impacts Are Strong Contributors to Muscle Damage in Professional Australian Football

Gastin, P. B., Hunkin, S. L., Fahrner, B., & Robertson, S. (2019) · Journal of Strength and Conditioning Research · doi:10.1519/jsc.0000000000003023 · Cited by 82

Effectiveness of a culturally attuned Internet-based depression prevention program for Chinese adolescents: A randomized controlled trial: I p et al.

Ip, P., Chim, D., Chan, K. L., Li, T. M. H., Ho, F. K. W., Van Voorhees, B. W., Tiwari, A., Tsang, A., Chan, C. W. L., Ho, M., et al. (2016) · Depression and Anxiety · doi:10.1002/da.22554 · Cited by 82

Free establishment of primary health care providers: effects on geographical equity

Isaksson, D., Blomqvist, P., & Winblad, U. (2015) · BMC Health Services Research · doi:10.1186/s12913-016-1259-z · Cited by 81

Gamified, Automated Virtual Reality Exposure Therapy for Fear of Spiders: A Single-Subject Trial Under Simulated Real-World Conditions

Lindner, P., Miloff, A., Bergman, C., Andersson, G., Hamilton, W., & Carlbring, P. (2020) · Frontiers in Psychiatry · doi:10.3389/fpsyt.2020.00116 · Cited by 66

Associations between adolescent cannabis use and young-adult functioning in three longitudinal twin studies

Schaefer, J. D., Hamdi, N. R., Malone, S. M., Vrieze, S., Wilson, S., McGue, M., & Iacono, W. G. (2021) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2013180118 · Cited by 64

Longitudinal Autonomic Nervous System Measures Correlate With Stress and Ulcerative Colitis Disease Activity and Predict Flare

Hirten, R. P., Danieletto, M., Scheel, R., Shervey, M., Ji, J., Hu, L., Sauk, J., Chang, L., Arnrich, B., Bӧttinger, E., et al. (2021) · Inflammatory Bowel Diseases · doi:10.1093/ibd/izaa323 · Cited by 60

Assessing Real-Time Moderation for Developing Adaptive Mobile Health Interventions for Medical Interns: Micro-Randomized Trial

NeCamp, T., Sen, S., Frank, E., Walton, M. A., Ionides, E. L., Fang, Y., Tewari, A., & Wu, Z. (2020) · Journal of Medical Internet Research · doi:10.2196/15033 · Cited by 55

Aging and physical function in type 2 diabetes: 8 years of an intensive lifestyle intervention

Rejeski, W. J., Bray, G. A., Chen, S.-H., Clark, J. M., Evans, M., Hill, J. O., Jakicic, J. M., Johnson, K. C., Neiberg, R., Ip, E. H., et al. (2015) · The Journals of Gerontology Series A: Biological Sciences and Medical Sciences · doi:10.1093/gerona/glu083 · Cited by 56

Habitat Hydrology and Geomorphology Control the Distribution of Malaria Vector Larvae in Rural Africa

Hardy, A. J., Gamarra, J. G. P., Cross, D. E., Macklin, M. G., Smith, M. W., Kihonda, J., Killeen, G. F., Ling’ala, G. N., & Thomas, C. J. (2013) · PLoS ONE · doi:10.1371/journal.pone.0081931 · Cited by 55

Clinical Epidemiology, Risk Factors, and Outcomes of Encephalitis in Older Adults

Hansen, M. A., Samannodi, M. S., Castelblanco, R. L., & Hasbun, R. (2020) · Clinical Infectious Diseases · doi:10.1093/cid/ciz635 · Cited by 48

Translational delivery of Cool Little Kids to prevent child internalising problems: randomised controlled trial

Bayer, J. K., Beatson, R., Bretherton, L., Hiscock, H., Wake, M., Gilbertson, T., Mihalopoulos, C., Prendergast, L. A., & Rapee, R. M. (2018) · Australian & New Zealand Journal of Psychiatry · doi:10.1177/0004867417726582 · Cited by 46

Executive function after risk-reducing salpingo-oophorectomy in BRCA1 and BRCA2 mutation carriers: does current mood and early life adversity matter?

Shanmugan, S., Sammel, M. D., Loughead, J., Ruparel, K., Gur, R. C., Brown, T. E., Faust, J., Domchek, S., & Epperson, C. N. (2020) · Menopause · doi:10.1097/gme.0000000000001535 · Cited by 46

Initial Outcomes of Transdiagnostic Internet-Delivered Cognitive Behavioral Therapy Tailored to Public Safety Personnel: Longitudinal Observational Study

Hadjistavropoulos, H. D., McCall, H. C., Thiessen, D. L., Huang, Z., Carleton, R. N., Dear, B. F., & Titov, N. (2021) · Journal of Medical Internet Research · doi:10.2196/27610 · Cited by 42

Cumulative exposure to state-level structural sexism and risk of disordered eating: Results from a 20-year prospective cohort study

Beccia, A. L., Austin, S. B., Baek, J., Agénor, M., Forrester, S., Ding, E. Y., Jesdale, W. M., & Lapane, K. L. (2022) · Social Science & Medicine · doi:10.1016/j.socscimed.2022.114956 · Cited by 40

Threshold Effects of Circulating Angiopoietin-Like 3 Levels on Plasma Lipoproteins

Fazio, S., Minnier, J., Shapiro, M. D., Tsimikas, S., Tarugi, P., Averna, M. R., Arca, M., & Tavori, H. (2017) · The Journal of Clinical Endocrinology & Metabolism · doi:10.1210/jc.2016-4043 · Cited by 40

Low Testosterone, but Not Estradiol, Is Associated With Incident Falls in Older Men: The International MrOS Study

Vandenput, L., Mellström, D., Laughlin, G. A., Cawthon, P. M., Cauley, J. A., Hoffman, A. R., Karlsson, M. K., Rosengren, B. E., Ljunggren, Ö., Nethander, M., et al. (2017) · Journal of Bone and Mineral Research · doi:10.1002/jbmr.3088 · Cited by 40

Body mass index associates with amyotrophic lateral sclerosis survival and metabolomic profiles

Goutman, S. A., Boss, J., Iyer, G., Habra, H., Savelieff, M. G., Karnovsky, A., Mukherjee, B., & Feldman, E. L. (2023) · Muscle & Nerve · doi:10.1002/mus.27744 · Cited by 31

Effect of Thyroid Function Variations Within the Laboratory Reference Range on Health Status, Mood, and Cognition in Levothyroxine-Treated Subjects

Samuels, M. H., Kolobova, I., Smeraglio, A., Niederhausen, M., Janowsky, J. S., & Schuff, K. G. (2016) · Thyroid® · doi:10.1089/thy.2016.0141 · Cited by 26

A pragmatic factorial randomized controlled trial of transdiagnostic internet-delivered cognitive behavioural therapy: Exploring benefits of homework reflection questionnaires and twice-weekly therapist support

Hadjistavropoulos, H. D., Peynenburg, V., Thiessen, D. L., Nugent, M., Adlam, K., Owens, K. M. B., Karin, E., Dear, B. F., & Titov, N. (2020) · Internet Interventions · doi:10.1016/j.invent.2020.100357 · Cited by 25

Psychotic symptoms in 16p11.2 copy‐number variant carriers

Jutla, A., Turner, J. B., Green Snyder, L., Chung, W. K., & Veenstra‐VanderWeele, J. (2020) · Autism Research · doi:10.1002/aur.2232 · Cited by 21

Spanish in Chicago

Potowski, K., & Torres, L. (2023) · doi:10.1093/oso/9780199326143.001.0001 · Cited by 20

Acceptance and commitment-based therapy for patients with psychiatric and physical health conditions in routine general hospital care - Development, implementation and outcomes.

Burian, H., Böge, K., Burian, R., Burns, A., Nguyen, M. H., Ohse, L., Ta, T. M. T., Hahn, E., & Diefenbacher, A. (2021) · Journal of Psychosomatic Research · doi:10.1016/j.jpsychores.2021.110374 · Cited by 19

Which alcohol use disorder criteria contribute to the association of ADH1B with alcohol dependence?: ADH1B variants and AUD

Hart, A. B., Lynch, K. G., Farrer, L., Gelernter, J., & Kranzler, H. R. (2016) · Addiction Biology · doi:10.1111/adb.12244 · Cited by 17

Association of solid fuel use with a risk score capturing dementia risk among middle-aged and older adults: a prospective cohort study

Pu, F., Hu, Y., Li, C., Cao, X., Yang, Z., Liu, Y., Zhang, J., Li, X., Yang, Y., Wang, W., et al. (2023) · Environmental Research · doi:10.1016/j.envres.2022.115022 · Cited by 16

Social Dynamics of a Newly Integrated Bachelor Group of Asian Elephants (Elephas maximus): Welfare implications

Schreier, A. L., Readyhough, T. S., Moresco, A., Davis, M., & Joseph, S. (2023) · Journal of Applied Animal Welfare Science · doi:10.1080/10888705.2021.1908141 · Cited by 15

Joint Models for Estimating Determinants of Cognitive Decline in the Presence of Survival Bias

Davis-Plourde, K. L., Mayeda, E. R., Lodi, S., Filshtein, T., Beiser, A., Gross, A. L., Seshadri, S., Glymour, M. M., & Tripodis, Y. (2022) · Epidemiology · doi:10.1097/ede.0000000000001472 · Cited by 15

Impacts of socialization on bull Asian elephant (Elephas maximus) stereotypical behavior

Readyhough, T. S., Joseph, S., Davis, M., Moresco, A., & Schreier, A. L. (2022) · Journal of Zoological and Botanical Gardens · doi:10.3390/jzbg3010010 · Cited by 13

Effect of a solar lighting intervention on fuel-based lighting use and exposure to household air pollution in rural Uganda: A randomized controlled trial

Wallach, E. S., Lam, N. L., Nuwagira, E., Muyanja, D., Tayebwa, M., Valeri, L., Tsai, A. C., Vallarino, J., Allen, J. G., & Lai, P. S. (2022) · Indoor Air · doi:10.1111/ina.12986 · Cited by 13

Mobile Acceptance and Commitment Therapy With Distressed First-Generation College Students: Microrandomized Trial

Thomas, E. B. K., Sagorac Gruichich, T., Maronge, J. M., Hoel, S., Victory, A., Stowe, Z. N., & Cochran, A. (2023) · JMIR Mental Health · doi:10.2196/43065 · Cited by 9

Exploring psychological mechanisms of clinical response to an internet-delivered psychological pain management program

Gandy, M., Karin, E., Jones, M. P., McDonald, S., Sharpe, L., Titov, N., & Dear, B. F. (2018) · European Journal of Pain · doi:10.1002/ejp.1239 · Cited by 6

Physiological changes in captive elephants in northern Thailand as a result of the COVID-19 tourism ban-muscle, liver, metabolic function, and body condition

Supanta, J., Brown, J. L., Bansiddhi, P., Thitaram, C., Punyapornwithaya, V., Punturee, K., Somboon, N., Towiboon, P., & Khonmee, J. (2023) · Frontiers in Veterinary Science · doi:10.3389/fvets.2023.1303537 · Cited by 4

Initial interactions matter: Warm-up play affects 2-year-olds' cooperative ability with an unfamiliar same-aged peer

Breeland, N., Henderson, A. M. E., & Low, R. (2022) · Journal of Experimental Child Psychology · doi:10.1016/j.jecp.2021.105328 · Cited by 4

Pseudoreplication bias in single-cell studies; a practical solution

Zimmerman, K. D., Espeland, M. A., & Langefeld, C. D. (2020) · doi:10.1101/2020.01.15.906248 · Cited by 332