Cited by 22Pluripotent Stem Cells Research3D Printing in Biomedical ResearchHair Growth and Disorders

Efficient Generation of Skin Organoids from Pluripotent Cells via Defined Extracellular Matrix Cues and Morphogen Gradients in a Spindle‐Shaped Microfluidic Device

Open access
Quílez, Cristina, Jeon, Eun Y., Pappalardo, Alberto, Pathak, Pooja, Abaci, Hasan E.·2024·Advanced Healthcare Materials

Abstract

Pluripotent stem cell‐derived skin organoids (PSOs) emerge as a developmental skin model that is self‐organized into multiple components, such as hair follicles. Despite their impressive complexity, PSOs are currently generated in the absence of 3D extracellular matrix (ECM) signals and have several major limitations, including an inverted anatomy (e.g., epidermis inside/dermis outside). In this work, a method is established to generate PSOs effectively in a chemically‐defined 3D ECM environment. After examining various dermal ECM molecules, it is found that PSOs generated in collagen ‐type I (COLI) supplemented with laminin 511 (LAM511) exhibit increased growth compared to conventional free‐floating conditions, but fail to induce complete skin differentiation due in part to necrosis. This problem is addressed by generating the PSOs in a 3D bioprinted spindle‐shaped hydrogel device, which constrains organoid growth longitudinally. This culture system significantly reduces organoid necrosis and leads to a twofold increase in keratinocyte differentiation and an eightfold increase in hair follicle formation. Finally, the system is adapted as a microfluidic device to create asymmetrical gradients of differentiation factors and improves the spatial organization of dermal and epidermal cells. This study highlights the pivotal role of ECM and morphogen gradients in promoting and spatially‐controlling skin differentiation in the PSO framework.

AI snapshot

Written from the paper’s full text.

TL;DR

This paper develops a defined 3D ECM culture system for pluripotent stem cell-derived skin organoids (PSOs), using collagen I supplemented with laminin 511 and a 3D-bioprinted spindle-shaped microfluidic device. The spindle geometry reduces necrosis and improves epidermal and hair follicle differentiation, while microfluidic morphogen gradients spatially bias dermal/epidermal organization.

Key findings

  • Collagen I + laminin 511 (COL I+LAM511) supported the highest PSO growth, with a ~6-fold increase in cross-sectional area versus floating culture and a ~3-fold increase versus COL I alone.
  • Spherical COL I+LAM511 PSOs grew but failed to complete skin differentiation, with necrosis and loss of neural differentiation; spindle-shaped culture reduced early and late apoptosis and lowered LDH-based death ratio.
  • Spindle culture increased keratinocyte differentiation two-fold and hair follicle formation eight-fold, reaching up to 80% hair follicle formation efficiency versus other conditions.
  • A microfluidic spindle device generated bidirectional chemical gradients and, with asymmetric BMP4/SB versus FGF-2/LDN perfusion, spatially controlled K14+ epidermal differentiation near the BMP4 channel.

Methods

  • Mouse embryonic stem cells (Atoh1/nGFP reporter) were aggregated into embryoid bodies, embedded on day 3 in Matrigel, COL I, or COL I supplemented with skin ECM molecules, and differentiated with BMP4/SB and FGF-2/LDN before maturation to day 32.
  • PSOs were cultured in 3D-bioprinted PEGDA spindle devices or GelMA/PEGDA microfluidic devices; oxygen profiles were simulated in COMSOL, and differentiation was assessed by immunofluorescence, qPCR, LDH/PrestoBlue viability assays, TUNEL, and hair bulb counts.
  • HUVEC spheroid sprouting under a VEGF gradient validated microfluidic gradient function; statistical comparisons used one-way ANOVA with Tukey’s test or Student’s t-test.

Limitations

  • The paper states that the mechanism of cell death in PSOs remains unclear and may involve deprivation of oxygen, glucose, or larger molecules.
  • The paper states that hair follicle numbers per PSO remain variable across samples and experiments, and that further optimization of growth factor level/timing or ECM composition may be needed for anatomically relevant complex skin structures.
  • The paper states that working collagen I concentrations do not recapitulate native ECM mechanical properties; the study focuses on chemical ECM cues, and the text makes evident that the findings are in mouse ESCs rather than human pluripotent cells.

Model-written summary. Check it against the paper before relying on it.

Integrity signals

Registry

Crossref · 10.1002/adhm.202400405

Cites

75 of 75 references verified0 citation errors · 0 not checkable

Statistics

Nothing to recompute.

Claims the paper makes

41 of 58 cited sources checked · 16 supported · 1 flagged · accuracy not yet measured

  • Premisecitation

    Skin organoids with inside-out anatomy have to be precisely incised and/or manually inverted to generate functional grafts and models.

    “Moreover, skin organoids with inside-out anatomy have to be precisely incised and/or manually inverted to generate functional grafts and models [3,5].”
    Quote in the paperSubstantial claim2 of 2 sources checked
    • cites [3] Lee J, van der Valk WH, Serdy SA, Deakin CC, Kim J, Le AP, Koehler KR, Nat. Protoc. 2022, 17, 1266. 35322210 PMC10461778 source

      The Introduction’s “Limitations” section confirms the inside-out cystic anatomy. But “Skin reconstruction and wound healing” says intact organoids were placed into incisions in mouse skin, then unfurled and integrated after transplantation. It does not describe incising or manually inverting the organoids as necessary to make grafts. (LLM, conf=0.88)

      Checked by a reasoning model — may be wrong.

      Experimental — accuracy not yet measured
    • cites [5] Jung S-Y, You HJ, Kim M-J, Ko G, Lee S, Kang K-S, iScience 2022, 25, 105150. 36193049 PMC9526179 source

      The Introduction describes enclosed skin organoids with inside-out anatomy. In Results > Air-liquid interface (ALI)-skin organoids (page unavailable), the authors report dissecting organoids into four portions and placing them dermis-down to expose the epidermis, producing a skin model. The paper does not establish that precise incision or manual inversion is necessary for functional grafts, and it does not describe generating grafts. (LLM, conf=0.86)

      Experimental — accuracy not yet measured
  • Premisecitation

    Collagen type I is the major constituent of the dermis, interlaced with other important ECM components such as collagen III and VII, fibronectin, vitronectin, hyaluronic acid, and glycosaminoglycans, such as heparin.

    “Unlike Matrigel, the major constituent of the dermis is collagen type I, which is interlaced with other important ECM components such as collagen III and VII [23,24], fibronectin [25], vitronectin [11], hyaluronic acid [26,27], and glycosaminoglycans, such as heparin [28], all of which contribute to key physiological skin functions.”
    Quote in the paperSubstantial claim2 of 4 sources checked
    • cites [23] Smith LT, Holbrook KA, Madri JA, Am. J. Anat. 1986, 175, 507. 3521252 source
    • cites [24] Mouw JK, Ou G, Weaver VM, Nat. Rev. Mol. Cell Biol. 2014, 15, 771. 25370693 PMC4682873 source

      The citation to this source is attached specifically to vitronectin. In our copy, searches for vitronectin and dermis found vitronectin only in the References section; the substantive ECM passages do not establish that it is a component of the dermis. (LLM, conf=0.72)

      Experimental — accuracy not yet measured
    • cites [25] Tracy LE, Minasian RA, Caterson EJ, Adv. Wound Care 2016, 5, 119. PMC4779293 26989578 source
    • cites [11] Huang J, Heng S, Zhang W, Liu Y, Xia T, Ji C, juan Zhang L, Semin. Cell Dev. Biol. 2022, 128, 137. 35339360 source
  • Premisecitation

    Current PSO protocols generate skin as free-floating cellular aggregates in medium suspension in the absence of physiological 3D ECM cues normally found in skin development.

    “Despite the ECM’s critical role during organogenesis, the current PSO protocols generate skin as free-floating cellular aggregates in medium suspension in the absence of physiological 3D ECM cues normally found in skin development.”
    Quote in the paperSubstantial claim2 of 2 sources checked
    • cites [2] Lee J, Bӧscke R, Tang PC, Hartman BH, Heller S, Koehler KR, Cell Rep. 2018, 22, 242. 29298425 PMC5806130 source

      The Discussion describes floating aggregates, and Experimental Procedures (PSC differentiation; page unavailable) places individual aggregates in low-adhesion wells containing medium. But the paper does not establish that they lack physiological 3D ECM cues: the protocol adds Matrigel, and the Results (Self-assembly of skin organoids recapitulates embryonic development; page unavailable) report ECM proteins at the epidermal–dermal interface. (LLM, conf=0.86)

      Experimental — accuracy not yet measured
    • cites [3] Lee J, van der Valk WH, Serdy SA, Deakin CC, Kim J, Le AP, Koehler KR, Nat. Protoc. 2022, 17, 1266. 35322210 PMC10461778 source

      The Materials > Equipment setup procedure describes a transition to floating culture in medium, supporting the free-floating aggregate portion of the claim. But Materials > Reagents setup specifies Matrigel in both the initial differentiation medium (2%) and the floating-culture medium (1%). The paper does not establish that these cultures lack physiological 3D ECM cues, so that part is not supported by this source. (LLM, conf=0.86)

      Experimental — accuracy not yet measured
  • Premisecitation

    In mouse PSOs, Atoh1 is expressed in pluripotent cells.

    “According to previous studies in mouse PSOs [2], Atoh1 is expressed in pluripotent cells; it switches off with the loss of pluripotency, and then turns back on after day 10 of differentiation as an indicator of epidermal differentiation.”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [2] Lee J, Bӧscke R, Tang PC, Hartman BH, Heller S, Koehler KR, Cell Rep. 2018, 22, 242. 29298425 PMC5806130 source

      The Results section identifies an Atoh1/nGFP mouse embryonic stem-cell line used to produce skin organoids, but it does not say that Atoh1 is expressed in pluripotent cells. Searches for Atoh1 expression in pluripotent cells and for the claimed differentiation timeline found no passage establishing that expression pattern. (LLM, conf=0.74)

      Experimental — accuracy not yet measured
  • Premisecitation

    Formation of necrotic cores was previously observed in other large organoid systems.

    “The formation of necrotic cores was previously observed in other large organoid systems [19].”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [19] Kozlowski MT, Crook CJ, Ku HT, Commun. Biol. 2021, 4, DOI 10.1038/s42003-021-02910-8. 34893703 PMC8664924 source

      In “Synthetic hydrogels in action: Modeling difficult tissues such as the brain and pancreas” (page unavailable), the review says larger islets are known to form necrotic centers because oxygen and nutrients cannot diffuse sufficiently. It raises this as a concern while discussing the size of islet-organoid aggregates, but does not say necrotic cores were observed in those organoids or in other large organoid systems. (LLM, conf=0.82)

      Experimental — accuracy not yet measured
  • May combine two claims. 23
  • Classified as probably not a substantial claim. 14
  • May combine two claims.

    Premisecitation

    Matrigel has an ill-defined chemistry and composition, and major lot-to-lot variation, and thus offers poor control over ECM composition.

    “Although Matrigel provides important biochemical cues, it has an ill-defined chemistry and composition, and major lot-to-lot variation [18,19], and thus offers a poor control over ECM composition [20].”
    Quote in the paperSubstantial claim3 of 3 sources checked
    • cites [18] Hofer M, Lutolf MP, Nat. Rev. Mater. 2021, 6, 402. 33623712 PMC7893133 source
    • cites [19] Kozlowski MT, Crook CJ, Ku HT, Commun. Biol. 2021, 4, DOI 10.1038/s42003-021-02910-8. 34893703 PMC8664924 source
    • cites [20] Aisenbrey EA, Murphy WL, Nat. Rev. Mater. 2020, 5, 539. 32953138 PMC7500703 source
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Premisecitation

    Matrigel is likely the most widely-used material used for organoid generation, composed of collagen IV, laminin, and entactin derived from the Engelbreth− Holm−Swarm (EHS) mouse sarcoma which thermally crosslink to form a hydrogel.

    “Matrigel is likely the most widely-used material used for organoid generation [17], composed of collagen IV, laminin, and entactin derived from the Engelbreth− Holm−Swarm (EHS) mouse sarcoma which thermally crosslink to form a hydrogel.”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [17] Yin X, Mead BE, Safaee H, Langer R, Karp JM, Levy O, Cell Stem Cell 2016, 18, 25. 26748754 PMC4728053 source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    PSOs harbor anatomically complex structures, such as hair follicles and sebaceous glands.

    “In addition to the dermal and epidermal compartments, they harbor anatomically complex structures, such as hair follicles and sebaceous glands [3,4].”
    Quote in the paperNot a substantial claim2 of 2 sources checked
    • cites [3] Lee J, van der Valk WH, Serdy SA, Deakin CC, Kim J, Le AP, Koehler KR, Nat. Protoc. 2022, 17, 1266. 35322210 PMC10461778 source
    • cites [4] Lee J, Rabbani CC, Gao H, Steinhart MR, Woodruff BM, Pflum ZE, Kim A, Heller S, Liu Y, Shipchandler TZ,, Nature 2020, 582, 399. 32494013 PMC7593871 source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    Several alternative methods have highlighted advantages of replacing Matrigel with tissue-relevant ECM components for other organs.

    “Several alternative methods have highlighted advantages of replacing Matrigel with tissue-relevant ECM components for other organs [16,21,22].”
    Quote in the paperNot a substantial claim2 of 3 sources checked
    • cites [16] Dorgau B, Felemban M, Hilgen G, Kiening M, Zerti D, Hunt NC, Doherty M, Whitfield P, Hallam D, White K,, Biomaterials 2019, 199, 63. 30738336 source

      The Discussion (page not provided) reports that adding retina- and RPE-derived ECM peptides improved synaptic-marker expression and light responsiveness in retinal organoids. But Methods §2.5 says the stem cells were grown on Matrigel-coated plates and the ECM was added as a supplement, not used to replace Matrigel. (LLM, conf=0.88)

      Experimental — accuracy not yet measured
    • cites [21] Bi H, Karanth SS, Ye K, Stein R, Jin S, ACS Biomater. Sci. Eng. 2020, 6, 4155. 33463310 source
    • cites [22] Giobbe GG, Crowley C, Luni C, Campinoti S, Khedr M, Kretzschmar K, De Santis MM, Zambaiti E, Michielin F, Meran L,, Nat. Commun. 2019, 10, DOI 10.1038/s41467-019-13605-4. 31827102 PMC6906306 source
  • May combine two claims.

    Premisecitation

    Current PSO protocols include Matrigel either as a supplement dissolved in the differentiation media (1-2%) or for post-embedding of PSO only after day 20 in 3D Matrigel for further maturation.

    “The current PSO protocols include Matrigel either as a supplement dissolved in the differentiation media (1–2%) or for post-embedding of PSO only after day 20 in 3D Matrigel for further maturation [2,3].”
    Quote in the paperSubstantial claim2 of 2 sources checked
    • cites [2] Lee J, Bӧscke R, Tang PC, Hartman BH, Heller S, Koehler KR, Cell Rep. 2018, 22, 242. 29298425 PMC5806130 source
    • cites [3] Lee J, van der Valk WH, Serdy SA, Deakin CC, Kim J, Le AP, Koehler KR, Nat. Protoc. 2022, 17, 1266. 35322210 PMC10461778 source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    A recent study reported a slicing culture method for neocortical organoid generation that sectioned organoids into 500-μm-thick slices to overcome interior hypoxia and cell death over long-term cultures.

    “A recent study reported a slicing culture method for neocortical organoid generation that sectioned the organoids into 500-μm-thick slices to overcome interior hypoxia and cell death over long-term cultures [39].”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [39] Qian X, Su Y, Adam CD, Deutschmann AU, Pather SR, Goldberg EM, Su K, Li S, Lu L, Jacob F,, Cell Stem Cell 2020, 26, 766. 32142682 PMC7366517 source
  • Classified as probably not a substantial claim.

    Premisecitation

    Atoh1 turns back on after day 10 of differentiation as an indicator of epidermal differentiation.

    “According to previous studies in mouse PSOs [2], Atoh1 is expressed in pluripotent cells; it switches off with the loss of pluripotency, and then turns back on after day 10 of differentiation as an indicator of epidermal differentiation.”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [2] Lee J, Bӧscke R, Tang PC, Hartman BH, Heller S, Koehler KR, Cell Rep. 2018, 22, 242. 29298425 PMC5806130 source

      In Results, ‘Specialized epidermal and dermal cellular compartments arise in skin organoids’ (page unavailable), the paper reports Atoh1/nGFP-positive cells arising in the epithelium on days 14–16, resembling Merkel cells. It does not report Atoh1 expression in pluripotent cells, its switching off and back on, or its use as a general indicator of epidermal differentiation; the epidermal-development Results section instead identifies KRT5 expression from day 10. (LLM, conf=0.84)

      Experimental — accuracy not yet measured
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    PSOs are already being adopted for various applications including disease modeling and regenerative therapy.

    “Despite their recent discovery, PSOs are already being adopted for various applications including disease modeling and regenerative therapy [5,7–9], yet several considerations remain, such as their limited maturation and efficiency, and non-anatomical organization of dermal and epidermal compartments.”
    Quote in the paperNot a substantial claim3 of 4 sources checked
    • cites [5] Jung S-Y, You HJ, Kim M-J, Ko G, Lee S, Kang K-S, iScience 2022, 25, 105150. 36193049 PMC9526179 source

      The Introduction describes pluripotent stem cell-derived skin organoids as a platform for investigating disease and regeneration, and the Discussion reports their use to model atopic dermatitis. It does not establish that they are already being adopted for regenerative therapy; investigating regeneration is not the same as therapeutic use. The indexed passages provide no page numbers. (LLM, conf=0.86)

      Experimental — accuracy not yet measured
    • cites [7] Ma J, Li W, Cao R, Gao D, Zhang Q, Li X, Li B, Lv L, Li M, Jiang J,, Adv. Sci. 2022, 9, DOI 10.1002/advs.202106075. PMC9165518 35315234 source

      The Introduction and Discussion (page unavailable) describe iPSC-derived skin organoids used to treat localized scleroderma in mice, supporting regenerative therapy as an application. The Results identify the disease model as a bleomycin-induced mouse model; the copy does not show the organoids being used for disease modeling. (LLM, conf=0.85)

      Experimental — accuracy not yet measured
    • cites [8] Ramovs V, Janssen H, Fuentes I, Pitaval A, Rachidi W, Chuva SM de Sousa Lopes, C. Freund, X. Gidrol, C. L. Mummery, K. Raymond, Stem Cell Reports 2022, 17, 1279. 35561682 PMC9213820

      Not checked in the free run.

    • cites [9] Ma J, Liu J, Gao D, Li X, Zhang Q, Lv L, Wang Y, Li J, Zhu Y, Wu Z,, Adv. Sci. 2022, 9, DOI 10.1002/advs.202104192. source

      The Introduction (page not provided) says the authors used a skin organoid to model SARS-CoV-2 infection, supporting disease modeling. The Discussion (page not provided) proposes treating complex skin disease with organoids as a possible future application; it does not show that PSOs are already being adopted for regenerative therapy. (LLM, conf=0.88)

      Experimental — accuracy not yet measured
  • Classified as probably not a substantial claim.

    Premisecitation

    Atoh1 switches off with the loss of pluripotency.

    “According to previous studies in mouse PSOs [2], Atoh1 is expressed in pluripotent cells; it switches off with the loss of pluripotency, and then turns back on after day 10 of differentiation as an indicator of epidermal differentiation.”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [2] Lee J, Bӧscke R, Tang PC, Hartman BH, Heller S, Koehler KR, Cell Rep. 2018, 22, 242. 29298425 PMC5806130 source

      The Results section (‘HF formation is cell line- and aggregate morphology-dependent’; page unavailable) describes differentiation of an Atoh1/nGFP stem-cell line, but does not report when Atoh1 expression switches off. Searches for Atoh1 expression and loss of pluripotency found no passage addressing that transition. (LLM, conf=0.75)

      Experimental — accuracy not yet measured
  • Classified as probably not a substantial claim. May combine two claims.

    Premisecitation

    Atoh-1 is expressed by hair-follicle stem cells and progenitors, and by embryonic melanocytes and placode cells.

    “Atoh-1 gene was previously shown to be expressed by hair-follicle stem cells and progenitors, and by embryonic melanocytes and placode cells [2,34,35].”
    Quote in the paperSubstantial claim3 of 3 sources checked
    • cites [2] Lee J, Bӧscke R, Tang PC, Hartman BH, Heller S, Koehler KR, Cell Rep. 2018, 22, 242. 29298425 PMC5806130 source

      The Results sections on HF formation and specialized cellular compartments (page not available in our copy) describe an Atoh1/nGFP stem-cell line and melanocytes in its skin organoids. They do not report Atoh1 expression in hair-follicle stem cells, progenitors, embryonic melanocytes, or placode cells. Searches for those cell types and Atoh1 expression found no passage establishing the claim. (LLM, conf=0.73)

      Experimental — accuracy not yet measured
    • cites [34] Sennett R, Wang Z, Rezza A, Grisanti L, Roitershtein N, Sicchio C, Mok KW, Heitman NJ, Clavel C, Ma’ayan A,, Dev. Cell 2015, 34, 577. 26256211 PMC4573840 source

      The Results sections describe embryonic placode progenitors and melanocytes and identify other genes expressed in those cells, but the passages do not identify Atoh-1 as one of them. Searches for Atoh1, Atoh-1, and atonal homolog 1 found no passage addressing its expression; page numbers are unavailable in our copy. (LLM, conf=0.72)

      Experimental — accuracy not yet measured
    • cites [35] Rezza A, Wang Z, Sennett R, Qiao W, Wang D, Heitman N, Mok KW, Clavel C, Yi R, Zandstra P,, Cell Rep. 2016, 14, 3001. 27009580 PMC4826467 source

      The Results passages on cell isolation and progenitor signatures identify markers for hair-follicle cells and melanocytes, but do not identify Atoh-1 as one of them. The Discussion mentions shared signature genes in placode cells without naming Atoh-1; searches for “Atoh1,” “Atoh-1,” and “atonal homolog 1” found no passage establishing the claimed expression pattern. Page numbers were not provided in our copy. (LLM, conf=0.76)

      Experimental — accuracy not yet measured
  • May combine two claims.

    Findingown data

    GFP-Atoh1 expression was reestablished after day 14 and was located in areas close to the epidermal channel and absent near the dermal channel.

    “GFP-Atoh1 expression (indicative of epidermal progenitor differentiation [2]) was reestablished after day 14, and remarkably, the expression was located in areas close to the epidermal channel, and was absent near the dermal channel, suggesting the effect of morphogen gradients at early time points.”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [2] Lee J, Bӧscke R, Tang PC, Hartman BH, Heller S, Koehler KR, Cell Rep. 2018, 22, 242. 29298425 PMC5806130 source

      The Results section, “Specialized epidermal and dermal cellular compartments arise in skin organoids” (page not provided), reports Atoh1/nGFP-positive cells arising in the epithelium between days 14 and 16. It describes them as Merkel-like cells, not as an indicator of epidermal progenitor differentiation. It does not report expression relative to epidermal or dermal channels; that spatial claim is not supported by this source. (LLM, conf=0.85)

      Experimental — accuracy not yet measured
  • Classified as probably not a substantial claim.

    Premisecitation

    Mechanical properties of the cell and tissue microenvironment play an important role in cell survival, proliferation, migration, and tissue differentiation.

    “Mechanical properties, e.g., ECM stiffness, of the cell and tissue microenvironment are known to play an important role in cell survival [53,54], proliferation[55], migration[56], and tissue differentiation[57,58].”
    Quote in the paperSubstantial claim2 of 4 sources checked
    • cites [53] Cassel De Camps C, Aslani S, Stylianesis N, Nami H, Mohamed NV, Durcan TM, Moraes C, ACS Appl. Bio Mater. 2022, 5, 214. 35014820 source
    • cites [54] Capeling MM, Czerwinski M, Huang S, Tsai YH, Wu A, Nagy MS, Juliar B, Sundaram N, Song Y, Han WM,, Stem Cell Reports 2019, 12, 381. 30612954 PMC6373433 source
    • cites [55] Lu P, Weaver VM, Werb Z, Cell Biol J. 2012, 196, 395. PMC3283993 22351925 source
    • cites [56] C. A. Reinhart-King, M. Dembo, D. A. Hammer, Biophys. J. 2008, 95, 6044. 18775964 PMC2599854

      Not checked in the free run.

  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Premisecitation

    Collagen I is the most abundant protein in human ECM, comprising 25% dry weight.

    “Collagen I is the most abundant protein in human ECM, comprising 25% (dry weight)[59].”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [59] Antoine EE, Vlachos PP, Rylander MN, Tissue Eng. - Part B Rev. 2014, 20, 683. PMC4241868 24923709 source

      The Introduction says collagen comprises 25% by dry weight of total protein in vivo and that type I is the most prevalent collagen type. It does not assign the 25% figure specifically to collagen I or state that it is 25% of human ECM dry weight. (LLM, conf=0.88)

      Experimental — accuracy not yet measured
  • May combine two claims.

    Premisecitation

    Collagen I presents a consistent and controllable material composition while showing biochemical and biophysical characteristics of tissue microenvironment, including cell adhesion sites.

    “It presents a consistent and controllable material composition while showing biochemical and biophysical characteristics of tissue microenvironment, including cell adhesion sites[60,61].”
    Quote in the paperSubstantial claim1 of 2 sources checked
    • cites [60] Drury JL, Mooney DJ, Biomaterials 2003, 24, 4337. 12922147 source
    • cites [61] Shoulders MD, Raines RT, Annu. Rev. Biochem. 2009, 78, 929. 19344236 PMC2846778 source

      The Introduction identifies collagen as a major extracellular-matrix component, and the Biological and Biomedical Applications section describes collagen domains that interact with biomolecules and collagen-related peptides that bind cells. However, the Collagenous Biomaterials section says isolated bovine collagen suffers from heterogeneity; it does not establish that collagen I has a consistent, controllable material composition. The paper also says synthetic collagen mimics still lack many properties of natural fibrils. (LLM, conf=0.86)

      Experimental — accuracy not yet measured
  • May combine two claims.

    Findingown data

    Spindle culture in COL I+LAM511 increased the efficiency of keratinocyte differentiation and enabled differentiation of PDGFRα+ dermal progenitors, neurons (TUJ1+), neural crest-derived cells (p75+), and Merkel cells (Krt8+), which were missing in spherical COL I+LAM511 culture.

    “The spindle culture in COL I+LAM511 increased the efficiency of keratinocyte differentiation and enabled differentiation of PDGFRα+ dermal progenitors (Figure 5A–C), neurons (TUJ1+), neural crest-derived cells (p75+), and Merkel cells (Krt8+) (Figure S4A), which were missing in the spherical COL I+LAM511 culture [43,44].”
    Quote in the paperSubstantial claim1 of 2 sources checked
    • cites [43] Abraham J, Mathew S, Int. J. Appl. basic Med. Res. 2019, 9, 9. 30820413 PMC6385537 source

      The Origin section discusses Merkel-cell development and CK8 expression, but not the claimed culture experiment. Searches for spindle versus spherical COL I+LAM511 culture and for the listed cell markers found no passage reporting the differentiation outcomes; page numbers were not available in our copy. (LLM, conf=0.77)

      Experimental — accuracy not yet measured
    • cites [44] Moll I, Roessler M, Brandner JM, Eispert A-C, Houdek P, Moll R, Eur. J. Cell Biol. 2005, 84, 259. 15819406 source
  • May combine two claims.

    Findingown data

    Neural differentiation was proven by positive expression of TUJ1 for floating and Matrigel culture conditions, but it was absent in EBs cultured in COL I+LAM511 hydrogels.

    “Moreover, whereas neural differentiation was proven by positive expression of TUJ1 for floating and Matrigel culture conditions, it was absent in EBs cultured in COL I+LAM511 hydrogels.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    PSOs generated in COL I+LAM511 continued to grow up to day 28, whereas growth under other conditions slowed after day 14.

    “Furthermore, PSOs generated in COL I+LAM511 continued to grow up to day 28, whereas the growth of PSOs generated under other conditions slowed after day 14 (Figure 3B).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Krt8 expression for early epithelia differentiation and adipocyte staining were consistent for all culture conditions.

    “Conversely, Krt8 expression for early epithelia differentiation and adipocyte staining (Figure 3D) were consistent for all culture conditions.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Floating culture, COL I alone, Matrigel and FN showed irregular and scattered GFP expression (patchy), whereas other ECM conditions including COL I+LAM511 displayed uniform GFP expression in the outer surface.

    “The floating culture, COL I alone (red square), Matrigel and FN showed irregular and scattered GFP expression (e.g., patchy), whereas those in other ECM conditions (blue square), including COL I supplemented with LAM511 (COL I+LAM511), displayed uniform GFP expression in the outer surface (Figure 2B–D).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    COL I+LAM511 generated the highest growth, with a ~6-fold increase compared with floating culture and a ~3-fold increase compared with COL I alone.

    “Although PSOs in each ECM type outgrew those in floating culture, COL I+LAM511 generated the highest growth, with a ~6-fold increase compared with floating culture and a ~3-fold increase compared with COL I alone.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Epidermal and mesenchymal differentiation was confirmed by positive expression of Krt14 and PDGFα for all culture conditions, but it was considerably less in COL I+LAM511 culture.

    “Although epidermal and mesenchymal differentiation was confirmed by positive expression of Krt14 and PDGFα for all culture conditions, it was considerably less in COL I+LAM511 culture (Figure 3C).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Spherical COL I+LAM511 culture led to cell death and an increase in the death ratio.

    “Measurement of lactate dehydrogenase (LDH) and PrestoBlue activity in the culture medium (Figure S3B–C) indicated that spherical COL I+LAM511 culture led to cell death, and hence an increase in the death ratio (Figure 4G), supporting our hypothesis that limited nutrient availability causes failure of ECM-embedded PSOs in later stages.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Reduction of BMP4 to 15 ng/ml while maintaining LDN moved the localization of epidermal differentiation to the peripheries, albeit with uniform expression on all sides.

    “Reduction of BMP4 to 15 ng/ml while maintaining the LDN (Figure 7E-left) moved the localization of epidermal differentiation to the peripheries, albeit with uniform expression on all sides.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    The number of sprouts and their length significantly increased in the area exposed to higher VEGF concentrations compared to lower VEGF concentrations.

    “Quantitative representation of this phenomenon is represented in terms of the number of sprouts (Figure 6E) and their length (Figure 6F), showing a significant increase when compared to the area exposed to lower VEGF concentrations (Figure 6G).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Lowering LDN concentration together with reduced BMP4 led to differential K14 expression and formation of epidermal cells near the BMP4 channel.

    “Lowering LDN concentration together with reduced BMP4 led to the differential K14 expression and formation of epidermal cells near the BMP4 channel (Figure 7E-right and Figure 7G).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Spindle culture in COL I+LAM511 resulted in generation of adipose tissue as a thick layer over the entire PSO, whereas floating culture generated sparse adipose tissue preferentially located near the hair follicles.

    “Although there was no difference in the total amount of quantified oil-red-o staining compared to floating culture, spindle culture in COL I+LAM511 resulted in generation of adipose tissue as thick layer over the entire PSO (Figure 5H–I), whereas floating culture generated sparse adipose tissue preferentially located near the hair follicles (Figure 3D).”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductnone given

    The mESCs used for the study were below passage 30.

    “The mESCs used for the study were below passage 30.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    Human dermis ECM components comprise >50-60% of the dermis volume during the first trimester of skin development.

    “Human dermis is a major connective tissue with specialized extracellular matrix (ECM) components comprising >50–60% of the dermis volume during the first trimester of skin development [10].”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites [10] Van Exan RJ, Hardy MH, Am. J. Anat. 1984, 169, 149. 6711458 source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductnone given

    Matrigel is also present in the floating culture condition at a low concentration, e.g., 1-2% (v/v), as dissolved in culture medium without forming a 3D hydrogel.

    “Noteworthy, Matrigel is also present in the floating culture condition at a low concentration, e.g.,1–2% (v/v), as dissolved in culture medium without forming a 3D hydrogel.”
    Quote in the paperNot a substantial claim
  • Classified as probably not a substantial claim.

    Premisecitation

    How cells interact with their cellular and extracellular microenvironment in the stem cell niche during embryogenesis is crucial for the correct differentiation of the tissues.

    “How cells interact with their cellular and extracellular microenvironment in the stem cell niche during embryogenesis is crucial for the correct differentiation of the tissues [11].”
    Quote in the paperSubstantial claim0 of 1 sources checked
    • cites [11] Huang J, Heng S, Zhang W, Liu Y, Xia T, Ji C, juan Zhang L, Semin. Cell Dev. Biol. 2022, 128, 137. 35339360 source
  • May combine two claims.

    Premisenone given

    Spherical organoids grown without boundaries enlarge in all directions, which over time reduces the availability of nutrients to cells in the center.

    “Spherical organoids grown without boundaries enlarge in all directions, which over time reduces the availability of nutrients to cells in the center.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Premisecitation

    PSOs offer a comprehensive physiological complexity compared to the previous 3D reconstructed skin models, representing a wide range of skin cell types, including melanocytes, neurons, adipocytes and Merkel cells.

    “PSOs offer a comprehensive physiological complexity compared to the previous 3D reconstructed skin models [6], representing a wide range of skin cell types, including melanocytes, neurons, adipocytes and Merkel cells.”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites [6] Abaci HE, Guo Z, Doucet Y, Jacków J, Christiano A, Exp. Biol. Med. 2017, 242, 1657. PMC5786367 28592171 source
  • May combine two claims.

    Interpretationown data

    The use of a spindle-shaped culture system enabled ECM-embedded culture of PSOs and extended growth of PSOs through reducing cell death.

    “The use of a spindle-shaped culture system enabled ECM-embedded culture of PSOs and the extended growth of PSOs through reducing cell death.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationown data

    Spindle geometry overcomes the limitation of cell death in ECM-embedded PSOs, as evidenced by LDH activity in spindle COL I+LAM511 similar to floating culture.

    “This limitation is overcome by the spindle geometry of the PSO, as evidenced by LDH activity in the spindle COL I+LAM511 culture, which was similar to that in the floating culture.”
    Quote in the paperSubstantial claim
34 of 34
  • The paper relies on this without support.

    Skin organoids have inverted anatomy, with the epidermis on the interior and the dermis on the exterior.

    “A major limitation of skin organoids is their inverted anatomy— with the epidermis on the interior and the dermis on the exterior.”
  • The paper relies on this without support.

    The same 3D ECM-based hydrogel approach has not been explored for skin yet.

    “While many other organoid models, including brain[13], intestinal [14], mammary gland [15], and retinal organoids [16], employ 3D ECM-based hydrogels to induce complex tissue architecture that cannot be achieved in ECM-free floating culture, the same has not been explored for skin yet.”
  • The paper relies on this without support.

    PSOs have limited maturation and efficiency, and non-anatomical organization of dermal and epidermal compartments.

    “Despite their recent discovery, PSOs are already being adopted for various applications including disease modeling and regenerative therapy [5,7–9], yet several considerations remain, such as their limited maturation and efficiency, and non-anatomical organization of dermal and epidermal compartments.”
  • The paper relies on this without support.

    BMP4/SB promote epidermal differentiation and FGF-2/LDN promote dermal differentiation.

    “On day 4, we perfused one channel with epidermal differentiation factors BMP4/SB, and the opposite channel with dermal differentiation factors FGF-2/LDN.”
4 of 4

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

Each contradiction between two passages listed here was confirmed by an independent check.

  • Merkel-cell differentiation is both present and missing in spherical collagen culture

    Major

    One results section says Krt8 staining was consistent across all culture conditions, including spherical COL I+LAM511 culture. A later section says Merkel cells (Krt8+) were missing in that culture.

  • Cy5 is assigned two molecular weights

    Minor

    The methods identify Cy5 as 519 Da, but the results identify the Cy5 used to validate the device as 667 Da.

  • Dermal differentiation factors are assigned different start days

    Minor

    The microfluidic-device protocol introduces FGF-2 and LDN into the opposite chamber on day 5, whereas the results say that channel was perfused with those factors on day 4.

3 of 3

Cites

Flagged first, then by citations

Research works printed but not linked: 3

  1. Kozlowski M. T., 2021, Commun. Bio.l, 4, 3642
  2. Patel D., 2008, Anticancer Res., 28, 2679
  3. Griffin M. F., 2017, J Otolaryngol, 46

Cited by

Still being checked.

Authors
Quílez, C., Jeon, E. Y., Pappalardo, A., Pathak, P., & Abaci, H. E.
Affiliations
  • Columbia University Irving Medical Center (US)
  • Korea Food Research Institute (KR)
Corresponding author
Abaci, Hasan E.
Venue
Advanced Healthcare Materials
Publisher
Wiley
Published
2024-03-15
Volume
13
Issue
20
Pages
e2400405-e2400405
ISSN
  • 2192-2640 (ISSN-L)
  • 2192-2659
OpenAlex
W4392542952
Cited by
22
References
75
Citations by year
2026: 9 · 2025: 10 · 2024: 3
FWCI
2.54
Type
journal article
Language
en
Open access
Locations
  • Advanced Healthcare Materials (publishedVersion)
  • PubMed (publishedVersion)
  • PubMed Central (submittedVersion)
  • Europe PMC (PubMed Central) (submittedVersion)
Funders
  • National Institute of Biomedical Imaging and Bioengineering (R21EB028970)
  • Ministerio de Universidades
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Pluripotent Stem Cells Research
  • Physical Sciences › Engineering › Biomedical Engineering › 3D Printing in Biomedical Research
  • Health Sciences › Medicine › Urology › Hair Growth and Disorders
Keywords
skin organoids, pluripotent stem cells, extracellular matrix, type I collagen, laminin-511, 3D bioprinting, microfluidics, morphogen gradients, hair follicle formation, keratinocyte differentiation
MeSH terms
Animals, Cell Differentiation, Extracellular Matrix, Humans, Organoids, Skin, Keratinocytes, Hair Follicle, Hydrogels, Tissue Engineering, Pluripotent Stem Cells, Mice, Lab-On-A-Chip Devices

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Claims read by deepseek-v4.1-flash under definition version 3 (extract-v3) on 2026-10-23.

Classified by jev-1.13-20260917 (gold-guideline-v0.2) on 2026-10-23.

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Statistics and arithmetic are recomputed, not judged.

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