Three-dimensional organotypic culture: experimental models of mammalian biology and disease
Open accessAbstract
Mammalian organs are challenging to study as they are fairly inaccessible to experimental manipulation and optical observation. Recent advances in three-dimensional (3D) culture techniques, coupled with the ability to independently manipulate genetic and microenvironmental factors, have enabled the real-time study of mammalian tissues. These systems have been used to visualize the cellular basis of epithelial morphogenesis, to test the roles of specific genes in regulating cell behaviours within epithelial tissues and to elucidate the contribution of microenvironmental factors to normal and disease processes. Collectively, these novel models can be used to answer fundamental biological questions and generate replacement human tissues, and they enable testing of novel therapeutic approaches, often using patient-derived cells.
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Organoids developed in artificial in vitro conditions retain the organ identity.
“Organoids developed in the artificial in vitro conditions retain the organ identity,[ 16 , 17 ]”
From Sweat Gland Organoids Originating from Reprogrammed Epidermal Keratinocytes Functionally Recapitulated Damaged Skin (2021) · cites this paper as [17]
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Matrix elasticity directs stem cell lineage specification
Engler, A. J., Sen, S., Sweeney, H. L., & Discher, D. E. (2006) · Cell · doi:10.1016/j.cell.2006.06.044 · Cited by 13,915 · see citing works
RNA-Guided Human Genome Engineering via Cas9
Mali, P., Yang, L., Esvelt, K. M., Aach, J., Guell, M., DiCarlo, J. E., Norville, J. E., & Church, G. M. (2013) · Science · doi:10.1126/science.1232033 · Cited by 9,210 · see citing works
Molecular Mechanisms of Stress-Responsive Changes in Collagen and Elastin Networks in Skin
Aziz, J., Shezali, H., Radzi, Z., Yahya, N. A., Abu Kassim, N. H., Czernuszka, J., & Rahman, M. T. (2016) · Skin Pharmacology and Physiology · doi:10.1159/000447017 · Cited by 7,323 · see citing works
Single Lgr5 stem cells build crypt-villus structures in vitro without a mesenchymal niche
Sato, T., Vries, R. G., Snippert, H. J., van de Wetering, M., Barker, N., Stange, D. E., van Es, J. H., Abo, A., Kujala, P., Peters, P. J., et al. (2009) · Nature · doi:10.1038/nature07935 · Cited by 7,204 · see citing works
Cerebral organoids model human brain development and microcephaly
Lancaster, M. A., Renner, M., Martin, C.-A., Wenzel, D., Bicknell, L. S., Hurles, M. E., Homfray, T., Penninger, J. M., Jackson, A. P., & Knoblich, J. A. (2013) · Nature · doi:10.1038/nature12517 · Cited by 5,372 · see citing works
Alberts, B., Johnson, A. D., Lewis, J. H., RAFF, M. C., Roberts, K. J., & Walter, P. (2007) · W.W. Norton eBooks · doi:10.1201/9780203833445 · Cited by 4,591 · see citing works
Reconstituting organ-level lung functions on a chip
Huh, D., Matthews, B. D., Mammoto, A., Montoya-Zavala, M., Hsin, H. Y., & Ingber, D. E. (2010) · Science · doi:10.1126/science.1188302 · Cited by 4,250 · see citing works
Matrix Crosslinking Forces Tumor Progression by Enhancing Integrin Signaling
Levental, K. R., Yu, H., Kass, L., Lakins, J. N., Egeblad, M., Erler, J. T., Fong, S. F. T., Csiszar, K., Giaccia, A., Weninger, W., et al. (2009) · Cell · doi:10.1016/j.cell.2009.10.027 · Cited by 4,101 · see citing works
Tensional homeostasis and the malignant phenotype
Paszek, M. J., Zahir, N., Johnson, K. R., Lakins, J. N., Rozenberg, G. I., Gefen, A., Reinhart-King, C. A., Margulies, S. S., Dembo, M., Boettiger, D., et al. (2005) · Cancer Cell · doi:10.1016/j.ccr.2005.08.010 · Cited by 3,941 · see citing works
Sato, T., Stange, D. E., Ferrante, M., Vries, R. G. J., van Es, J. H., van den Brink, S., van Houdt, W. J., Pronk, A., van Gorp, J., Siersema, P. D., et al. (2011) · Gastroenterology · doi:10.1053/j.gastro.2011.07.050 · Cited by 3,753 · see citing works
Organoid Models and Applications in Biomedical Research
Xinaris, C., Brizi, V., & Remuzzi, G. (2015) · The Nephron journals/Nephron journals · doi:10.1159/000433566 · Cited by 3,517 · see citing works
A simple method for organotypic cultures of nervous tissue
Stoppini, L., Buchs, P., & Muller, D. (1991) · Journal of Neuroscience Methods · doi:10.1016/0165-0270(91)90128-m · Cited by 3,097 · see citing works
Taking Cell-Matrix Adhesions to the Third Dimension
Cukierman, E., Pankov, R., Stevens, D. R., & Yamada, K. M. (2001) · Science · doi:10.1126/science.1064829 · Cited by 3,027 · see citing works
Macrophages: Obligate Partners for Tumor Cell Migration, Invasion, and Metastasis
Condeelis, J. S., & Pollard, J. W. (2006) · Cell · doi:10.1016/j.cell.2006.01.007 · Cited by 2,693 · see citing works
Paneth cells constitute the niche for Lgr5 stem cells in intestinal crypts
Sato, T., van Es, J. H., Snippert, H. J., Stange, D. E., Vries, R. G., van den Born, M., Barker, N., Shroyer, N. F., van de Wetering, M., & Clevers, H. (2011) · Nature · doi:10.1038/nature09637 · Cited by 2,510 · see citing works
Vascularized and functional human liver from an iPSC-derived organ bud transplant
Takebe, T., Sekine, K., Enomura, M., Koike, H., Kimura, M., Ogaeri, T., Zhang, R.-R., Ueno, Y., Zheng, Y.-W., Koike, N., et al. (2013) · Nature · doi:10.1038/nature12271 · Cited by 2,170 · see citing works
Intra-tumour heterogeneity: a looking glass for cancer?
Marusyk, A., Almendro, V., & Polyák, K. (2012) · Nature reviews. Cancer · doi:10.1038/nrc3261 · Cited by 2,003 · see citing works
Debnath, J., Muthuswamy, S. K., & Brugge, J. S. (2003) · Methods · doi:10.1016/s1046-2023(03)00032-x · Cited by 2,001 · see citing works
Self-organizing optic-cup morphogenesis in three-dimensional culture
Eiraku, M., Takata, N., Ishibashi, H., Kawada, M., Sakakura, E., Okuda, S., Sekiguchi, K., Adachi, T., & Sasai, Y. (2011) · Nature · doi:10.1038/nature09941 · Cited by 2,001 · see citing works
Cancer Invasion and the Microenvironment: Plasticity and Reciprocity
Friedl, P., & Alexander, S. (2011) · Cell · doi:10.1016/j.cell.2011.11.016 · Cited by 1,940 · see citing works
Rapid casting of patterned vascular networks for perfusable engineered three-dimensional tissues
Miller, J. S., Stevens, K. R., Yang, M. T., Baker, B. M., Nguyen, D.-H. T., Cohen, D. M., Toro, E., Chen, A. A., Galie, P. A., Yu, X., et al. (2012) · Nature Materials · doi:10.1038/nmat3357 · Cited by 1,917 · see citing works
Directed differentiation of human pluripotent stem cells into intestinal tissue in vitro
Spence, J., Mayhew, C., Rankin, S., Kuhar, M., Vallance, J. E., Tolle, K., Hoskins, E. E., Kalinichenko, V., Wells, S., Zorn, A., et al. (2010) · Nature · doi:10.1038/nature09691 · Cited by 1,850 · see citing works
Collagen reorganization at the tumor-stromal interface facilitates local invasion
Provenzano, P. P., Eliceiri, K. W., Campbell, J. M., Inman, D. R., White, J. G., & Keely, P. J. (2006) · BMC Medicine · doi:10.1186/1741-7015-4-38 · Cited by 1,804 · see citing works
Deconstructing the third dimension – how 3D culture microenvironments alter cellular cues
Baker, B. M., & Chen, C. S. (2012) · Journal of Cell Science · doi:10.1242/jcs.079509 · Cited by 1,760 · see citing works
Matrigel: Basement membrane matrix with biological activity
Kleinman, H. K., & Martin, G. R. (2005) · Seminars in Cancer Biology · doi:10.1016/j.semcancer.2005.05.004 · Cited by 1,673 · see citing works
Gaggioli, C., Hooper, S., Hidalgo-Carcedo, C., Grosse, R., Marshall, J. F., Harrington, K., & Sahai, E. (2007) · Nature Cell Biology · doi:10.1038/ncb1658 · Cited by 1,589 · see citing works
Basal cells as stem cells of the mouse trachea and human airway epithelium
Rock, J. R., Onaitis, M. W., Rawlins, E. L., Lu, Y., Clark, C. P., Xue, Y., Randell, S. H., & Hogan, B. L. M. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0906850106 · Cited by 1,568 · see citing works
In vitro expansion of single Lgr5+ liver stem cells induced by Wnt-driven regeneration
Huch, M., Dorrell, C., Boj, S. F., van Es, J. H., Li, V. S. W., van de Wetering, M., Sato, T., Hamer, K., Sasaki, N., Finegold, M. J., et al. (2013) · Nature · doi:10.1038/nature11826 · Cited by 1,555 · see citing works
Lgr5+ve Stem Cells Drive Self-Renewal in the Stomach and Build Long-Lived Gastric Units In Vitro
Barker, N., Huch, M., Kujala, P., van de Wetering, M., Snippert, H. J., van Es, J. H., Sato, T., Stange, D. E., Begthel, H., van den Born, M., et al. (2010) · Cell Stem Cell · doi:10.1016/j.stem.2009.11.013 · Cited by 1,547 · see citing works
Eiraku, M., Watanabe, K., Matsuo-Takasaki, M., Kawada, M., Yonemura, S., Matsumura, M., Wataya, T., Nishiyama, A., Muguruma, K., & Sasai, Y. (2008) · Cell Stem Cell · doi:10.1016/j.stem.2008.09.002 · Cited by 1,522 · see citing works
Weaver, V. M., Petersen, O. W., Wang, F., Larabell, C. A., Briand, P., Damsky, C., & Bissell, M. J. (1997) · The Journal of Cell Biology · doi:10.1083/jcb.137.1.231 · Cited by 1,483 · see citing works
Calvo, F., Ege, N., Grande-Garcia, A., Hooper, S., Jenkins, R. P., Chaudhry, S. I., Harrington, K., Williamson, P., Moeendarbary, E., Charras, G., et al. (2013) · Nature Cell Biology · doi:10.1038/ncb2756 · Cited by 1,478 · see citing works
Self-formation of optic cups and storable stratified neural retina from human ESCs
Nakano, T., Ando, S., Takata, N., Kawada, M., Muguruma, K., Sekiguchi, K., Saito, K., Yonemura, S., Eiraku, M., & Sasai, Y. (2012) · Cell stem cell · doi:10.1016/j.stem.2012.05.009 · Cited by 1,447 · see citing works
Schwank, G., Koo, B.-K., Sasselli, V., Dekkers, J. F., Heo, I., Demircan, T., Sasaki, N., Boymans, S., Cuppen, E., van der Ent, C. K., et al. (2013) · Cell Stem Cell · doi:10.1016/j.stem.2013.11.002 · Cited by 1,424 · see citing works
Biology of the Laboratory Mouse
Heston, W. E. (1967) · Journal of Heredity · doi:10.1093/oxfordjournals.jhered.a107528 · Cited by 1,396 · see citing works
Nanotechnological strategies for engineering complex tissues
Dvir, T., Timko, B. P., Kohane, D. S., & Langer, R. (2011) · Nature Nanotechnology · doi:10.1038/nnano.2010.246 · Cited by 1,367 · see citing works
Collagen density promotes mammary tumor initiation and progression
Provenzano, P. P., Inman, D. R., Eliceiri, K. W., Knittel, J. G., Yan, L., Rueden, C., White, J. G., & Keely, P. J. (2008) · BMC Medicine · doi:10.1186/1741-7015-6-11 · Cited by 1,364 · see citing works
DeNardo, D. G., Barreto, J., Andreu, P., Vásquez, L. J., Tawfik, D., Kolhatkar, N. S., & Coussens, L. M. (2009) · Cancer Cell · doi:10.1016/j.ccr.2009.06.018 · Cited by 1,340 · see citing works
Aligned Collagen Is a Prognostic Signature for Survival in Human Breast Carcinoma
Conklin, M. W., Eickhoff, J. C., Riching, K. M., Pehlke, C. A., Eliceiri, K. W., Provenzano, P. P., Friedl, A., & Keely, P. J. (2011) · American Journal Of Pathology · doi:10.1016/j.ajpath.2010.11.076 · Cited by 1,293 · see citing works
Growth of cultured human epidermal cells into multiple epithelia suitable for grafting.
Green, H., Kehinde, O., & Thomas, J. M. (1979) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.76.11.5665 · Cited by 1,251 · see citing works
Tumors as Organs: Complex Tissues that Interface with the Entire Organism
Egeblad, M., Nakasone, E. S., & Werb, Z. (2010) · Developmental Cell · doi:10.1016/j.devcel.2010.05.012 · Cited by 1,230 · see citing works
Kubota, Y., Kleinman, H. K., Martin, G. R., & Lawley, T. J. (1988) · The Journal of Cell Biology · doi:10.1083/jcb.107.4.1589 · Cited by 1,210 · see citing works
The perivascular niche regulates breast tumour dormancy
Ghajar, C. M., Peinado, H., Mori, H., Matei, I. R., Evason, K. J., Brazier, H., Almeida, D., Koller, A., Hajjar, K. A., Stainier, D. Y. R., et al. (2013) · Nature Cell Biology · doi:10.1038/ncb2767 · Cited by 1,148 · see citing works
Nelson, C. M., & Bissell, M. J. (2006) · Annual Review of Cell and Developmental Biology · doi:10.1146/annurev.cellbio.22.010305.104315 · Cited by 1,121 · see citing works
Modelling glandular epithelial cancers in three-dimensional cultures
Debnath, J., & Brugge, J. S. (2005) · Nature reviews. Cancer · doi:10.1038/nrc1695 · Cited by 1,014 · see citing works
A functional CFTR assay using primary cystic fibrosis intestinal organoids
Dekkers, J. F., Wiegerinck, C. L., de Jonge, H. R., Bronsveld, I., Janssens, H. M., de Winter-de Groot, K. M., Brandsma, A. M., de Jong, N. W. M., Bijvelds, M. J. C., Scholte, B. J., et al. (2013) · Nature Medicine · doi:10.1038/nm.3201 · Cited by 999 · see citing works
Control of somatic tissue differentiation by the long non-coding RNA TINCR
Kretz, M., Siprashvili, Z., Chu, C., Webster, D., Zehnder, A., Qu, K., Lee, C. S., Flockhart, R., Groff, A., Chow, J. M., et al. (2012) · Nature · doi:10.1038/nature11661 · Cited by 920 · see citing works
Sustained in vitro intestinal epithelial culture within a Wnt-dependent stem cell niche
Ootani, A., Li, X., Sangiorgi, E., Ho, Q. T., Ueno, H., Toda, S., Sugihara, H., Fujimoto, K., Weissman, I. L., Capecchi, M. R., et al. (2009) · Nature Medicine · doi:10.1038/nm.1951 · Cited by 906 · see citing works
Dynamic interplay between the collagen scaffold and tumor evolution
Egeblad, M., Rasch, M. G., & Weaver, V. M. (2010) · Current Opinion in Cell Biology · doi:10.1016/j.ceb.2010.08.015 · Cited by 898 · see citing works
In vitro microvessels for the study of angiogenesis and thrombosis
Zheng, Y., Chen, J., Craven, M., Choi, N. W., Totorica, S., Diaz-Santana, A., Kermani, P., Hempstead, B., Fischbach-Teschl, C., López, J. A., et al. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1201240109 · Cited by 894 · see citing works
Organotypic slice cultures: a technique has come of age
Gähwiler, B. H. (1997) · Trends in Neurosciences · doi:10.1016/s0166-2236(97)01122-3 · Cited by 884 · see citing works
Directed movements and selective adhesion of embryonic amphibian cells
Townes, P. L., & Holtfreter, J. (1955) · Journal of Experimental Zoology · doi:10.1002/jez.1401280105 · Cited by 872 · see citing works
Taguchi, A., Kaku, Y., Ohmori, T., Sharmin, S., Ogawa, M., Sasaki, H., & Nishinakamura, R. (2013) · Cell stem cell · doi:10.1016/j.stem.2013.11.010 · Cited by 871 · see citing works
Collective Invasion in Breast Cancer Requires a Conserved Basal Epithelial Program
Cheung, K. J., Gabrielson, E. W., Werb, Z., & Ewald, A. J. (2013) · Cell · doi:10.1016/j.cell.2013.11.029 · Cited by 838 · see citing works
Self-citationFunctional engraftment of colon epithelium expanded in vitro from a single adult Lgr5+ stem cell
Yui, S., Nakamura, T., Sato, T., Nemoto, Y., Mizutani, T., Zheng, X., Ichinose, S., Nagaishi, T., Okamoto, R., Tsuchiya, K., et al. (2012) · Nature Medicine · doi:10.1038/nm.2695 · Cited by 805 · see citing works
Biology of the Laboratory Mouse
(1941) · JAMA · doi:10.1001/jama.1941.02820440081034 · Cited by 805 · see citing works
In vitro angiogenesis: endothelial cell tube formation on gelled basement membrane extract
Arnaoutova, I., & Kleinman, H. K. (2010) · Nature Protocols · doi:10.1038/nprot.2010.6 · Cited by 760 · see citing works
Takasato, M., Er, P. X., Becroft, M., Vanslambrouck, J. M., Stanley, E. G., Elefanty, A. G., & Little, M. H. (2013) · Nature Cell Biology · doi:10.1038/ncb2894 · Cited by 723 · see citing works
Unlimited in vitro expansion of adult bi-potent pancreas progenitors through the Lgr5/R-spondin axis
Huch, M., Bonfanti, P., Boj, S., Sato, T., Loomans, C. J. M., van de Wetering, M., Sojoodi, M., Li, V. S. W., Schuijers, J., Gračanin, A., et al. (2013) · EMBO Journal · doi:10.1038/emboj.2013.204 · Cited by 710 · see citing works
Streuli, C. H., Bailey, N., & Bissell, M. J. (1991) · The Journal of Cell Biology · doi:10.1083/jcb.115.5.1383 · Cited by 678 · see citing works
Greenburg, G., & Hay, E. D. (1982) · The Journal of Cell Biology · doi:10.1083/jcb.95.1.333 · Cited by 674 · see citing works
Epidermal differentiation: the bare essentials.
Fuchs, E. V. (1990) · The Journal of Cell Biology · doi:10.1083/jcb.111.6.2807 · Cited by 649 · see citing works
Collagen-based cell migration models in vitro and in vivo
Wolf, K., Alexander, S., Schacht, V., Coussens, L. M., von Andrian, U. H., van Rheenen, J., Deryugina, E., & Friedl, P. (2009) · Seminars in Cell & Developmental Biology · doi:10.1016/j.semcdb.2009.08.005 · Cited by 637 · see citing works
Collective Epithelial Migration and Cell Rearrangements Drive Mammary Branching Morphogenesis
Ewald, A. J., Brenot, A., Duong, M., Chan, B. S., & Werb, Z. (2008) · Developmental Cell · doi:10.1016/j.devcel.2008.03.003 · Cited by 620 · see citing works
Self-citationFundamentals of microfluidic cell culture in controlled microenvironments
Young, E. W. K., & Beebe, D. J. (2010) · Chemical Society Reviews · doi:10.1039/b909900j · Cited by 615 · see citing works
Observations on the living developing nerve fiber
Harrison, R. G. (1906) · Experimental Biology and Medicine · doi:10.3181/00379727-4-98 · Cited by 609 · see citing works
Building epithelial architecture: insights from three-dimensional culture models
O'Brien, L. E., Zegers, M. M. P., & Mostov, K. E. (2002) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm859 · Cited by 596 · see citing works
A molecular network for de novo generation of the apical surface and lumen
Bryant, D. M., Datta, A., Rodriguez-Fraticelli, A., Peränen, J., Martín‐Belmonte, F., & Mostov, K. E. (2010) · Nature Cell Biology · doi:10.1038/ncb2106 · Cited by 585 · see citing works
Fibronectin requirement in branching morphogenesis
Sakai, T., Larsen, M., & Yamada, K. M. (2003) · Nature · doi:10.1038/nature01712 · Cited by 555 · see citing works
ErbB2, but not ErbB1, reinitiates proliferation and induces luminal repopulation in epithelial acini
Muthuswamy, S. K., Li, D., Lelièvre, S. A., Bissell, M. J., & Brugge, J. S. (2001) · Nature Cell Biology · doi:10.1038/ncb0901-785 · Cited by 554 · see citing works
Guðjónsson, Þ., Rønnov‐Jessen, L., Villadsen, R., Rank, F. E., Bissell, M. J., & PETERSEN, O. W. (2002) · Journal of Cell Science · doi:10.1242/jcs.115.1.39 · Cited by 518 · see citing works
Observations of the living developing nerve fiber
Harrison, R. G., Greenman, M. J., Mall, F. P., & Jackson, C. M. (1907) · The Anatomical Record · doi:10.1002/ar.1090010503 · Cited by 515 · see citing works
Stange, D. E., Koo, B., Huch, M., Sibbel, G., Başak, O., Lyubimova, A., Kujala, P., Bartfeld, S., Köster, J., Geahlen, J. H., et al. (2013) · Cell · doi:10.1016/j.cell.2013.09.008 · Cited by 509 · see citing works
Self-formation of functional adenohypophysis in three-dimensional culture
Suga, H., Kadoshima, T., Minaguchi, M., Ohgushi, M., Soen, M., Nakano, T., Takata, N., Wataya, T., Muguruma, K., Miyoshi, H., et al. (2011) · Nature · doi:10.1038/nature10637 · Cited by 497 · see citing works
Lee, J., Bhang, D. H., Beede, A. M., Huang, T. L., Stripp, B. R., Bloch, K. D., Wagers, A. J., Tseng, Y., Ryeom, S. W., & Kim, C. F. (2014) · Cell · doi:10.1016/j.cell.2013.12.039 · Cited by 491 · see citing works
Biomimetic model to reconstitute angiogenic sprouting morphogenesis in vitro
Nguyen, D.-H. T., Stapleton, S. C., Yang, M. T., Cha, S. S., Choi, C. K., Galie, P. A., & Chen, C. S. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1221526110 · Cited by 487 · see citing works
p63 regulates proliferation and differentiation of developmentally mature keratinocytesPreprint
Truong, A. B., Kretz, M., Ridky, T. W., Kimmel, R. A., & Khavari, P. A. (2006) · Genes & Development · doi:10.1101/gad.1463206 · Cited by 480 · see citing works
Stem-cell-based, tissue engineered tracheal replacement in a child: a 2-year follow-up study
Elliott, M. J., Coppi, P. D., Speggiorin, S., Roebuck, D. J., Butler, C. R., Samuel, E. R., Crowley, C., McLaren, C. A., Fierens, A., Vondrys, D., et al. (2012) · The Lancet · doi:10.1016/s0140-6736(12)60737-5 · Cited by 477 · see citing works
Rac1 orientates epithelial apical polarity through effects on basolateral laminin assembly
O’Brien, L. E., Jou, T., Pollack, A. L., Zhang, Q., Hansen, S. H., Yurchenco, P. D., & Mostov, K. E. (2001) · Nature Cell Biology · doi:10.1038/ncb0901-831 · Cited by 468 · see citing works
Fell, H. B., & Robison, R. (1929) · Biochemical Journal · doi:10.1042/bj0230767 · Cited by 458 · see citing works
Cellular Pathology As Based upon Physiological and Pathological Histology.
(1972) · Annals of Internal Medicine · doi:10.7326/0003-4819-76-1-157_2 · Cited by 456 · see citing works
Nguyen-Ngoc, K.-V., Cheung, K. J., Brenot, A., Shamir, E. R., Gray, R. S., Hines, W. C., Yaswen, P., Werb, Z., & Ewald, A. J. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1212834109 · Cited by 449 · see citing works
Self-citationOncogenic transformation of diverse gastrointestinal tissues in primary organoid culture
Li, X., Nadauld, L. D., Ootani, A., Corney, D. C., Pai, R. K., Gevaert, O., Cantrell, M. A., Rack, P. G., Neal, J. T., Chan, C. W. M., et al. (2014) · Nature Medicine · doi:10.1038/nm.3585 · Cited by 443 · see citing works
Zhan, L., Rosenberg, A., Bergami, K. C., Yu, M., Xuan, Z., Jaffe, A. B., Allred, C., & Muthuswamy, S. K. (2008) · Cell · doi:10.1016/j.cell.2008.09.045 · Cited by 436 · see citing works
Simian, M., Hirai, Y., Navre, M., Werb, Z., Lochter, A., & Bissell, M. J. (2001) · Development · doi:10.1242/dev.128.16.3117 · Cited by 392 · see citing works
Next-generation regenerative medicine: organogenesis from stem cells in 3D culture.
Sasai, Y. (2013) · Cell Stem Cell · doi:10.1016/j.stem.2013.04.009 · Cited by 388 · see citing works
Inhibition of PI3K/mTOR Leads to Adaptive Resistance in Matrix-Attached Cancer Cells
Muranen, T. E., Selfors, L. M., Worster, D. T., Iwanicki, M., Song, L., Morales, F. C., Gao, S., Mills, G. B., & Brugge, J. S. (2012) · Cancer Cell · doi:10.1016/j.ccr.2011.12.024 · Cited by 385 · see citing works
β1-Integrin Orients Epithelial Polarity via Rac1 and Laminin
Yu, W., Datta, A., Leroy, P., O’Brien, L. E., Mak, G. Z., Jou, T., Matlin, K. S., Mostov, K. E., & Zegers, M. M. (2004) · Molecular Biology of the Cell · doi:10.1091/mbc.e04-05-0435 · Cited by 361 · see citing works
Generation of functional thyroid from embryonic stem cells
Antonica, F., Kasprzyk, D. F., Opitz, R., Iacovino, M., Liao, X.-H., Dumitrescu, A. M., Refetoff, S., Peremans, K., Manto, M., Kyba, M., et al. (2012) · Nature · doi:10.1038/nature11525 · Cited by 359 · see citing works
Assawachananont, J., Mandai, M., Okamoto, S., Yamada, C., Eiraku, M., Yonemura, S., Sasai, Y., & Takahashi, M. (2014) · Stem Cell Reports · doi:10.1016/j.stemcr.2014.03.011 · Cited by 353 · see citing works
Organ culture of mucosal biopsies of human small intestine
Browning, T. H., & Trier, J. S. (1969) · Journal of Clinical Investigation · doi:10.1172/jci106108 · Cited by 353 · see citing works
Parasympathetic Innervation Maintains Epithelial Progenitor Cells During Salivary Organogenesis
Knox, S. M., Lombaert, I. M. A., Reed, X., Vitale-Cross, L. A., Gutkind, J. S., & Hoffman, M. P. (2010) · Science · doi:10.1126/science.1192046 · Cited by 335 · see citing works
Controlled gene expression in primary Lgr5 organoid cultures
Koo, B.-K., Stange, D. E., Sato, T., Karthaus, W., Farin, H. F., Huch, M., van Es, J. H., & Clevers, H. (2012) · Nature Methods · doi:10.1038/nmeth.1802 · Cited by 320 · see citing works
Cdc42 controls spindle orientation to position the apical surface during epithelial morphogenesis
Jaffe, A. B., Kaji, N., Durgan, J., & Hall, A. (2008) · The Journal of Cell Biology · doi:10.1083/jcb.200807121 · Cited by 320 · see citing works
Programmed assembly of 3-dimensional microtissues with defined cellular connectivity
Gartner, Z. J., & Bertozzi, C. R. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0900717106 · Cited by 317 · see citing works
Preclinical model of organotypic culture for pharmacodynamic profiling of human tumors
Vaira, V., Fedele, G., Pyne, S., Fasoli, E., Zadra, G., Bailey, D., Snyder, E. L., Faversani, A., Coggi, G., Flavin, R., et al. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0907676107 · Cited by 269 · see citing works
The Role of GDNF/Ret Signaling in Ureteric Bud Cell Fate and Branching Morphogenesis
Shakya, R., Watanabe, T., & Costantini, F. D. (2005) · Developmental Cell · doi:10.1016/j.devcel.2004.11.008 · Cited by 268 · see citing works
Geometric control of vascular networks to enhance engineered tissue integration and function
Baranski, J. D., Chaturvedi, R. R., Stevens, K. R., Eyckmans, J., Carvalho, B., Solorzano, R. D., Yang, M. T., Miller, J. S., Bhatia, S. N., & Chen, C. S. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1217796110 · Cited by 267 · see citing works
Steinberg, Z. L., Myers, C., Heim, V. M., Lathrop, C. A., Rebustini, I. T., Stewart, J. S., Larsen, M., & Hoffman, M. P. (2005) · Development · doi:10.1242/dev.01690 · Cited by 264 · see citing works
Precision-cut tissue slices: Applications in pharmacology and toxicology
Parrish, A. R., Gandolfi, A. J., & Brendel, K. (1995) · Life Sciences · doi:10.1016/0024-3205(95)02176-j · Cited by 245 · see citing works
Aranda, V., Haire, T., Nolan, M. E., Calarco, J. P., Rosenberg, A. Z., Fawcett, J. P., Pawson, T. J., & Muthuswamy, S. K. (2006) · Nature Cell Biology · doi:10.1038/ncb1485 · Cited by 243 · see citing works
Taub, M. L., Wang, Y., Szczesny, T., & Kleinman, H. K. (1990) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.87.10.4002 · Cited by 241 · see citing works
Chi, X., Michos, O., Shakya, R., Riccio, P. N., Enomoto, H., Licht, J. D., Asai, N., Takahashi, M., Ohgami, N., Kato, M., et al. (2009) · Developmental Cell · doi:10.1016/j.devcel.2009.07.013 · Cited by 234 · see citing works
Srinivas, S., Goldberg, M. R., Watanabe, T., D’Agati, V. D., Al‐Awqati, Q., & Costantini, F. D. (1999) · Developmental Genetics · doi:10.1002/(sici)1520-6408(1999)24:3/4 · Cited by 234 · see citing works
Outgrowth of single oncogene-expressing cells from suppressive epithelial environments
Leung, C. T., & Brugge, J. S. (2012) · Nature · doi:10.1038/nature10826 · Cited by 227 · see citing works
Cell-Polarity Dynamics Controls the Mechanism of Lumen Formation in Epithelial Morphogenesis
Martín‐Belmonte, F., Yu, W., Rodriguez-Fraticelli, A., Ewald, A. J., Werb, Z., Alonso, M. A., & Mostov, K. E. (2008) · Current Biology · doi:10.1016/j.cub.2008.02.076 · Cited by 224 · see citing works
Self-citationSocial interactions among epithelial cells during tracheal branching morphogenesis
Ghabrial, A. S., & Krasnow, M. A. (2006) · Nature · doi:10.1038/nature04829 · Cited by 222 · see citing works
Akhtar, N., & Streuli, C. H. (2012) · Nature Cell Biology · doi:10.1038/ncb2646 · Cited by 220 · see citing works
Invasive three-dimensional organotypic neoplasia from multiple normal human epithelia
Ridky, T. W., Chow, J. M., Wong, D. J., & Khavari, P. A. (2010) · Nature Medicine · doi:10.1038/nm.2265 · Cited by 217 · see citing works
Dissociation of embryonic kidneys followed by reaggregation allows the formation of renal tissues
Unbekandt, M., & Davies, J. A. (2009) · Kidney International · doi:10.1038/ki.2009.482 · Cited by 209 · see citing works
Cell and fibronectin dynamics during branching morphogenesis
Larsen, M., Wei, C., & Yamada, K. M. (2006) · Journal of Cell Science · doi:10.1242/jcs.03079 · Cited by 208 · see citing works
Schrag, D., Garewal, H. S., Burstein, H. J., Samson, D. J., Hoff, D. D. V., & Somerfield, M. R. (2004) · Journal of Clinical Oncology · doi:10.1200/jco.2004.05.065 · Cited by 206 · see citing works
Twist1-induced dissemination preserves epithelial identity and requires E-cadherin
Shamir, E. R., Pappalardo, E., Jorgens, D. M., Coutinho, K., Tsai, W.-T., Aziz, K., Auer, M., Tran, P. T., Bader, J. S., & Ewald, A. J. (2014) · The Journal of Cell Biology · doi:10.1083/jcb.201306088 · Cited by 204 · see citing works
Self-citationThe cultivation in fluid medium of organised liver, pancreas and other tissues of foetal rats
Chen, J. M. (1954) · Experimental Cell Research · doi:10.1016/s0014-4827(54)80096-6 · Cited by 200 · see citing works
Branching morphogenesis independent of mesenchymal–epithelial contact in the developing kidney
Qiao, J., Sakurai, H., & Nigám, S. K. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.13.7330 · Cited by 192 · see citing works
Parasympathetic stimulation improves epithelial organ regeneration
Knox, S. M., Lombaert, I. M. A., Haddox, C. L., Abrams, S. R., Cotrim, A. P., Wilson, A. J., & Hoffman, M. P. (2013) · Nature Communications · doi:10.1038/ncomms2493 · Cited by 192 · see citing works
Novel Role for Netrins in Regulating Epithelial Behavior during Lung Branching Morphogenesis
Liu, Y., Stein, E., Oliver, T. N., Li, Y. H., Brunken, W. J., Koch, M., Tessier‐Lavigne, M., & Hogan, B. L. M. (2004) · Current Biology · doi:10.1016/j.cub.2004.05.020 · Cited by 192 · see citing works
Patterning Mechanisms of Branched Organs
Lu, P., & Werb, Z. (2008) · Science · doi:10.1126/science.1162783 · Cited by 189 · see citing works
Fata, J. E., Mori, H., Ewald, A. J., Zhang, H., Yao, E. S., Werb, Z., & Bissell, M. J. (2007) · Developmental Biology · doi:10.1016/j.ydbio.2007.03.013 · Cited by 187 · see citing works
Self-citationGlioblastoma Stem Cells Are Regulated by Interleukin-8 Signaling in a Tumoral Perivascular Niche
Infanger, D. W., Cho, Y., Lopez, B. S., Mohanan, S., Liu, S. C., Gursel, D. B., Boockvar, J. A., & Fischbach, C. (2013) · Cancer Research · doi:10.1158/0008-5472.can-13-1355 · Cited by 184 · see citing works
Formation of microvascular networks in vitro
Morgan, J. P., DelNero, P. F., Zheng, Y. Y., Verbridge, S. S., Chen, J., Craven, M., Choi, N., Diaz-Santana, A., Kermani, P., Hempstead, B. L., et al. (2013) · Nature Protocols · doi:10.1038/nprot.2013.110 · Cited by 178 · see citing works
Grugan, K. D., Miller, C. G., Yao, Y., Michaylira, C. Z., Ohashi, S., Klein–Szanto, A. J., Diehl, J. A., Herlyn, M., Han, M., Nakagawa, H., et al. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0914295107 · Cited by 178 · see citing works
Methods in Mammary Gland Biology and Breast Cancer Research
(2000) · Springer eBooks · doi:10.1007/978-1-4615-4295-7 · Cited by 177 · see citing works
Carey, S. P., Starchenko, A., McGregor, A. L., & Reinhart-King, C. A. (2013) · Clinical & Experimental Metastasis · doi:10.1007/s10585-013-9565-x · Cited by 174 · see citing works
Okawa, T., Michaylira, C. Z., Kalabis, J., Stairs, D. B., Nakagawa, H., Andl, C. D., Johnstone, C. N., Klein–Szanto, A. J., El‐Deiry, W. S., Cukierman, E., et al. (2007) · Genes & Development · doi:10.1101/gad.1544507 · Cited by 173 · see citing works
Engineering Three-Dimensional Pulmonary Tissue Constructs
Mondrinos, M. J., Koutzaki, S. H., Jiwanmall, E., Li, M., Dechadarevian, J.-P., Lelkes, P. I., & Finck, C. M. (2006) · Tissue Engineering · doi:10.1089/ten.2006.12.717 · Cited by 164 · see citing works
Kalabis, J., Wong, G. S., Vega, M. E., Natsuizaka, M., Robertson, E. S., Herlyn, M., Nakagawa, H., & Rustgi, A. K. (2012) · Nature Protocols · doi:10.1038/nprot.2011.437 · Cited by 163 · see citing works
Loss of Par3 promotes breast cancer metastasis by compromising cell–cell cohesion
Xue, B., Krishnamurthy, K., Allred, D. C., & Muthuswamy, S. K. (2012) · Nature Cell Biology · doi:10.1038/ncb2663 · Cited by 159 · see citing works
Ewald, A. J., Huebner, R. J., Pálsdóttir, H., Lee, J. K., Perez, M. J., Jorgens, D. M., Tauscher, A. N., Cheung, K. J., Werb, Z., & Auer, M. (2012) · Journal of Cell Science · doi:10.1242/jcs.096875 · Cited by 156 · see citing works
Self-citationPatterned Collagen Fibers Orient Branching Mammary Epithelium through Distinct Signaling Modules
Brownfield, D., Venugopalan, G., Lo, A. T., Mori, H., Tanner, K., Fletcher, D. A., & Bissell, M. J. (2013) · Current Biology · doi:10.1016/j.cub.2013.03.032 · Cited by 155 · see citing works
Townes and Holtfreter (1955): Directed movements and selective adhesion of embryonic amphibian cells
Steinberg, M. S., & Gilbert, S. F. (2004) · Journal of Experimental Zoology Part A Comparative Experimental Biology · doi:10.1002/jez.a.114 · Cited by 152 · see citing works
Btbd7 Regulates Epithelial Cell Dynamics and Branching Morphogenesis
Onodera, T., Sakai, T., Hsu, J. C., Matsumoto, K., Chiorini, J. A., & Yamada, K. M. (2010) · Science · doi:10.1126/science.1191880 · Cited by 151 · see citing works
Gálvez-Santisteban, M., Rodriguez-Fraticelli, A., Bryant, D. M., Vergarajauregui, S., Yasuda, T., Bañón‐Rodríguez, I., Bernascone, I., Datta, A., Spivak, N., Young, K., et al. (2012) · Nature Cell Biology · doi:10.1038/ncb2541 · Cited by 147 · see citing works
Self-Organization and Branching Morphogenesis of Primary Salivary Epithelial Cells
Wei, C., Larsen, M., Hoffman, M. P., & Yamada, K. M. (2007) · Tissue Engineering · doi:10.1089/ten.2006.0123 · Cited by 139 · see citing works
Burstein, H. J., Mangu, P. B., Somerfield, M. R., Schrag, D., Samson, D. J., Holt, L., Zelman, D., & Ajani, J. A. (2011) · Journal of Clinical Oncology · doi:10.1200/jco.2011.36.0354 · Cited by 139 · see citing works
Self-renewal of embryonic-stem-cell-derived progenitors by organ-matched mesenchyme
Sneddon, J. B., Borowiak, M., & Melton, D. (2012) · Nature · doi:10.1038/nature11463 · Cited by 129 · see citing works
Virchow, R., Chance, F., & Goodsir, J. (1860) · doi:10.5962/bhl.title.110759 · Cited by 127 · see citing works
Organotypic slice cultures of human glioblastoma reveal different susceptibilities to treatments
Merz, F., Gaunitz, F., Dehghani, F., Renner, C., Meixensberger, J., Gutenberg, A., Giese, A., Schopow, K., Hellwig, C. T., Schäfer, M., et al. (2013) · Neuro-Oncology · doi:10.1093/neuonc/not003 · Cited by 124 · see citing works
Kim, H. Y., Varner, V. D., & Nelson, C. M. (2013) · Development · doi:10.1242/dev.093682 · Cited by 121 · see citing works
Luminal Mitosis Drives Epithelial Cell Dispersal within the Branching Ureteric Bud
Packard, A. I., Georgas, K. M., Michos, O., Riccio, P. N., Cebrián, C., Combes, A. N., Ju, A. L., Ferrer‐Vaquer, A., Hadjantonakis, A., Zong, H., et al. (2013) · Developmental Cell · doi:10.1016/j.devcel.2013.09.001 · Cited by 120 · see citing works
Chapter 7 The Aortic Ring Model of Angiogenesis
Aplin, A. C., Fogel, E., Zorzi, P., & Nicosia, R. F. (2008) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/s0076-6879(08)02007-7 · Cited by 116 · see citing works
Explant culture of gastrointestinal tissue: a review of methods and applications
Randall, K. J., Turton, J. A., & Foster, J. R. (2011) · Cell Biology and Toxicology · doi:10.1007/s10565-011-9187-5 · Cited by 110 · see citing works
Beck, J. N., Singh, A., Rothenberg, A. R., Elisseeff, J. H., & Ewald, A. J. (2013) · Biomaterials · doi:10.1016/j.biomaterials.2013.08.077 · Cited by 108 · see citing works
Self-citationPatel, V., Likar, K. M., Zisman-Rozen, S., Cowherd, S. N., Lassiter, K. S., Sher, I., Yates, E., Turnbull, J., Ron, D., & Hoffman, M. (2008) · Journal of Biological Chemistry · doi:10.1074/jbc.m709995200 · Cited by 108 · see citing works
Lang, S., Stark, M., Collins, A. T., Paul, A., Stower, M. J., & Maitland, N. J. (2001) · PubMed · Cited by 107 · see citing works
Walker, J. L., Menko, A. S., Khalil, S., Rebustini, I. T., Hoffman, M. P., Kreidberg, J. A., & Kukuruzinska, M. A. (2008) · Developmental Dynamics · doi:10.1002/dvdy.21717 · Cited by 100 · see citing works
Pradhan-Bhatt, S., Harrington, D. A., Duncan, R. L., Jia, X., Witt, R. L., & Farach‐Carson, M. C. (2013) · Tissue Engineering Part A · doi:10.1089/ten.tea.2012.0301 · Cited by 99 · see citing works
[37] Techniques for studying development of normal mammary epithelial cells in organ culture
Topper, Y. J., Oka, T., & Vonderhaar, B. K. (1975) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/s0076-6879(75)39039-3 · Cited by 99 · see citing works
Daley, W. P., Gulfo, K. M., Sequeira, S. J., & Larsen, M. (2009) · Developmental Biology · doi:10.1016/j.ydbio.2009.09.037 · Cited by 95 · see citing works
Yu, W., Fang, X., Ewald, A. J., Wong, K., Hunt, C. A., Werb, Z., Matthay, M. A., & Mostov, K. E. (2007) · Molecular Biology of the Cell · doi:10.1091/mbc.e06-11-1052 · Cited by 91 · see citing works
Self-citationRole of PI 3-kinase and PIP3 in submandibular gland branching morphogenesis
Larsen, M., Hoffman, M. P., Sakai, T., Neibaur, J. C., Mitchell, J. M., & Yamada, K. M. (2003) · Developmental Biology · doi:10.1016/s0012-1606(02)00047-7 · Cited by 91 · see citing works
Dynamics of embryonic pancreas development using real-time imaging
Puri, S., & Hebrok, M. (2007) · Developmental Biology · doi:10.1016/j.ydbio.2007.03.003 · Cited by 89 · see citing works
Isolation, culture and genetic manipulation of mouse pancreatic ductal cells
Reichert, M., Takano, S., Heeg, S., Bakir, B. S., Botta, G., & Rustgi, A. (2013) · Nature Protocols · doi:10.1038/nprot.2013.079 · Cited by 89 · see citing works
Microfluidic Culture Models of Tumor Angiogenesis
Stroock, A. D., & Fischbach, C. (2010) · Tissue Engineering Part A · doi:10.1089/ten.tea.2009.0689 · Cited by 81 · see citing works
ROCK1-directed basement membrane positioning coordinates epithelial tissue polarity
Daley, W. P., Gervais, E. M., Centanni, S. W., Gulfo, K. M., Nelson, D. A., & Larsen, M. (2011) · Development · doi:10.1242/dev.075366 · Cited by 78 · see citing works
Yates, L. L., Schnatwinkel, C., Hazelwood, L., Chessum, L., Paudyal, A., Hilton, H., Romero, M. R., Wilde, J., Bogani, D., Sanderson, J., et al. (2013) · Developmental Biology · doi:10.1016/j.ydbio.2012.11.012 · Cited by 78 · see citing works
Morita, K., & Nogawa, H. (1999) · Developmental Dynamics · doi:10.1002/(sici)1097-0177(199906)215:2 · Cited by 77 · see citing works
Ganeva, V. V., Unbekandt, M., & Davies, J. A. (2011) · Organogenesis · doi:10.4161/org.7.2.14881 · Cited by 74 · see citing works
The ultrastructure of MCF‐10A acini
Underwood, J. M., Imbalzano, K. M., Weaver, V. M., Fischer, A. H., Imbalzano, A. N., & Nickerson, J. A. (2006) · Journal of Cellular Physiology · doi:10.1002/jcp.20639 · Cited by 73 · see citing works
Nguyen-Ngoc, K.-V., & Ewald, A. J. (2013) · Journal of Microscopy · doi:10.1111/jmi.12017 · Cited by 72 · see citing works
Self-citationBreast Cancer Subtype-Specific Interactions with the Microenvironment Dictate Mechanisms of Invasion
Dang, T. T., Prechtl, A. M., & Pearson, G. W. (2011) · Cancer Research · doi:10.1158/0008-5472.can-11-1818 · Cited by 70 · see citing works
Rosines, E., Johkura, K., Zhang, X., Schmidt, H. J., DeCambre, M. E., Bush, K. T., & Nigám, S. K. (2010) · Tissue Engineering Part A · doi:10.1089/ten.tea.2009.0548 · Cited by 69 · see citing works
del Moral, P.-M., & Warburton, D. (2010) · Methods in molecular biology · doi:10.1007/978-1-59745-019-5_5 · Cited by 68 · see citing works
Nonlinear Optical Imaging of Cellular Processes in Breast Cancer
Provenzano, P. P., Eliceiri, K. W., Yan, L., Ada-Nguema, A. S., Conklin, M. W., Inman, D. R., & Keely, P. J. (2008) · Microscopy and Microanalysis · doi:10.1017/s1431927608080884 · Cited by 64 · see citing works
Self-organization is a dynamic and lineage-intrinsic property of mammary epithelial cells
Chanson, L., Brownfield, D., Garbe, J. C., Kuhn, I., Stampfer, M. R., Bissell, M. J., & LaBarge, M. A. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1019556108 · Cited by 63 · see citing works
Magudia, K. A., Lahoz, A., & Hall, A. (2012) · The Journal of Cell Biology · doi:10.1083/jcb.201202108 · Cited by 63 · see citing works
Lobuloalveolar Differentiation in Mouse Mammary Tissues in vitro
Ichinose, R. R., & Nandi, S. (1964) · Science · doi:10.1126/science.145.3631.496 · Cited by 58 · see citing works
Biomaterials for stem cell differentiation
Singh, A., & Elisseeff, J. H. (2010) · Journal of Materials Chemistry · doi:10.1039/c0jm01613f · Cited by 57 · see citing works
Huebner, R. J., Lechler, T., & Ewald, A. J. (2014) · Development · doi:10.1242/dev.103333 · Cited by 56 · see citing works
Self-citationA strategy for in vitro propagation of rat nephrons
Steer, D. L., Bush, K. T., Meyer, T. N., Schwesinger, C., & Nigám, S. K. (2002) · Kidney International · doi:10.1046/j.1523-1755.2002.00694.x · Cited by 56 · see citing works
A Gutsy Task: Generating Intestinal Tissue from Human Pluripotent Stem Cells
Finkbeiner, S. R., & Spence, J. (2013) · Digestive Diseases and Sciences · doi:10.1007/s10620-013-2620-2 · Cited by 53 · see citing works
Morphological and Biochemical Analysis of Rac1 in Three‐Dimensional Epithelial Cell Cultures
O’Brien, L. E., Yu, W., Tang, K., Jou, T., Zegers, M. M., & Mostov, K. E. (2006) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/s0076-6879(06)06053-8 · Cited by 51 · see citing works
Human enteroids: preclinical models of non-inflammatory diarrhea
Kovbasnjuk, O. N., Zachos, N. C., In, J., Foulke-Abel, J. D., Ettayebi, K., Hyser, J. M., Broughman, J. R., Zeng, X., Middendorp, S., de Jonge, H. R., et al. (2013) · Stem Cell Research & Therapy · doi:10.1186/scrt364 · Cited by 51 · see citing works
Explant culture of rat colon: A model system for studying metabolism of chemical carcinogens
Autrup, H. N., Stoner, G. D., Jackson, F., Harris, C. C., Shamsuddin, A. K. M., Barrett, L. A., & Trump, B. F. (1978) · In Vitro Cellular & Developmental Biology - Plant · doi:10.1007/bf02616157 · Cited by 50 · see citing works
Trott, J. F., Vonderhaar, B. K., & Hovey, R. C. (2008) · Journal of Mammary Gland Biology and Neoplasia · doi:10.1007/s10911-008-9064-x · Cited by 49 · see citing works
Pancreatic Ductal Morphogenesis and the Pdx1 Homeodomain Transcription Factor
Wescott, M. P., Rovira, M., Reichert, M., von Burstin, J., Means, A. L., Leach, S. D., & Rustgi, A. K. (2009) · Molecular Biology of the Cell · doi:10.1091/mbc.e09-03-0203 · Cited by 48 · see citing works
Multiparametric image analysis of lung‐branching morphogenesis
Schnatwinkel, C., & Niswander, L. A. (2013) · Developmental Dynamics · doi:10.1002/dvdy.23961 · Cited by 47 · see citing works
Liu, J. S., Farlow, J., Paulson, A. K., LaBarge, M. A., & Gartner, Z. J. (2012) · Cell Reports · doi:10.1016/j.celrep.2012.08.037 · Cited by 45 · see citing works
Morizane, R., Monkawa, T., Fujii, S., Yamaguchi, S., Homma, K., Matsuzaki, Y., Okano, H., & Itoh, H. (2013) · PLoS ONE · doi:10.1371/journal.pone.0064843 · Cited by 43 · see citing works
Yagi, S., Matsuda, M., & Kiyokawa, E. (2012) · EMBO Reports · doi:10.1038/embor.2011.249 · Cited by 43 · see citing works
Saito, H., Takeuchi, M., Chida, K., & Miyajima, A. (2011) · PLoS ONE · doi:10.1371/journal.pone.0028209 · Cited by 42 · see citing works
Davis, G. E., Kim, D. J., Meng, C., Norden, P. R., Speichinger, K. R., Davis, M. T., Smith, A. O., Bowers, S., & Stratman, A. N. (2013) · Methods in molecular biology · doi:10.1007/978-1-62703-604-7_2 · Cited by 37 · see citing works
PI3K/mTOR signaling regulates prostatic branching morphogenesis
Ghosh, S., Lau, H., Simons, B. W., Powell, J. D., Meyers, D. J., Marzo, A. M. D., Berman, D. M., & Lotan, T. L. (2011) · Developmental Biology · doi:10.1016/j.ydbio.2011.09.027 · Cited by 34 · see citing works
Multiscale tissue engineering for liver reconstruction
Sudo, R. (2014) · Organogenesis · doi:10.4161/org.27968 · Cited by 32 · see citing works
Ewald, A. J. (2013) · Cold Spring Harbor Protocols · doi:10.1101/pdb.top072884 · Cited by 28 · see citing works
Self-citationDissection of Embryonic Mouse Kidney, Culture In Vitro, and Imaging of the Developing OrganPreprint
Costantini, F. D., Watanabe, T., Lu, B. C., Chi, X., & Srinivas, S. (2011) · Cold Spring Harbor Protocols · doi:10.1101/pdb.prot5613 · Cited by 25 · see citing works
Synthetic tissue biology: Tissue engineering meets synthetic biology
Sia, S. K., Gillette, B. M., & Yang, G. J. (2007) · Birth Defects Research Part C Embryo Today Reviews · doi:10.1002/bdrc.20105 · Cited by 22 · see citing works
Sakurai, A., Matsuda, M., & Kiyokawa, E. (2012) · Journal of Biological Chemistry · doi:10.1074/jbc.m112.377804 · Cited by 20 · see citing works
Genetic Modification and Recombination of Salivary Gland Organ Cultures
Sequeira, S. J., Gervais, E. M., Ray, S., & Larsen, M. (2013) · Journal of Visualized Experiments · doi:10.3791/50060 · Cited by 20 · see citing works
An improved organ culture method for adult mammalian lung
Guerrero, R. R., Rounds, D. E., & Booher, J. (1977) · In Vitro Cellular & Developmental Biology - Plant · doi:10.1007/bf02615145 · Cited by 20 · see citing works
In Vitro Culture of Embryonic Kidney Rudiments and Isolated Ureteric Buds
Zhang, X., Bush, K. T., & Nigám, S. K. (2012) · Methods in molecular biology · doi:10.1007/978-1-61779-851-1_2 · Cited by 16 · see citing works
Let's push things forward: disruptive technologies and the mechanics of tissue assembly
Varner, V. D., & Nelson, C. M. (2013) · Integrative Biology · doi:10.1039/c3ib40080h · Cited by 15 · see citing works
Viral Gene Transfer to Developing Mouse Salivary Glands
Hsu, J. C., Pasquale, G. D., Harunaga, J. S., Onodera, T., Hoffman, M. P., Chiorini, J. A., & Yamada, K. M. (2011) · Journal of Dental Research · doi:10.1177/0022034511429346 · Cited by 13 · see citing works
Hardman, P., Klement, B. J., & Spooner, B. S. (1993) · Development Growth & Differentiation · doi:10.1111/j.1440-169x.1993.00683.x · Cited by 13 · see citing works
Whole Organ Culture of the Mouse Mammary Gland
Ginsburg, E., & Vonderhaar, B. K. (2000) · Springer eBooks · doi:10.1007/978-1-4615-4295-7_14 · Cited by 10 · see citing works
Functional Profiling of Live Melanoma Samples Using a Novel Automated Platform
Schayowitz, A., Bertenshaw, G. P., Jeffries, E., Schatz, T. F., Cotton, J. B., Villanueva, J., Herlyn, M., Krepler, C., Vultur, A., Xu, W., et al. (2012) · PLoS ONE · doi:10.1371/journal.pone.0052760 · Cited by 9 · see citing works
Basal but not Luminal Mammary Epithelial Cells Require PI3K/mTOR Signaling for Ras-Driven Overgrowth
Plichta, K. A., Mathers, J. L., Gestl, S. A., Glick, A. B., & Gunther, E. J. (2012) · Cancer Research · doi:10.1158/0008-5472.can-12-1635 · Cited by 6 · see citing works
ATLAS AND EPITOME OF HUMAN HISTOLOGY AND MICROSCOPIC ANATOMY
SOBATTA, J., & Huber, G. C. (1903) · The American Journal of the Medical Sciences · doi:10.1097/00000441-190311000-00022 · Cited by 5 · see citing works
A Novel Three-Dimensional Cell Culture Method to Analyze Epidermal Cell Differentiation In Vitro
Okugawa, Y., & Hirai, Y. (2013) · Methods in molecular biology · doi:10.1007/7651_2013_45 · Cited by 3 · see citing works
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- [23]Aplin AC Fogel E Zorzi P Nicosia RF The aortic ring model of angiogenesis. Methods Enzymol 2008 443 119 136 18772014
- [163]Nguyen-Ngoc KV Nelson CM Tissue Morphogenesis: Methods and Protocols Vol. 1189 Methods in Molecular Biology 2014 Springer Science and Business Media
Cited by
Sorted by citations
Three-dimensional in vitro cell culture models in drug discovery and drug repositioning
Langhans, S. A. (2018) · Frontiers in Pharmacology · doi:10.3389/fphar.2018.00006 · Cited by 1,522 · see citing works
Organoids as an in vitro model of human development and disease
Fatehullah, A., Tan, S. H., & Barker, N. (2016) · Nature Cell Biology · doi:10.1038/ncb3312 · Cited by 1,508 · see citing works
Human primary liver cancer–derived organoid cultures for disease modeling and drug screening
Broutier, L., Mastrogiovanni, G., Verstegen, M. M., Francies, H. E., Gavarró, L. M., Bradshaw, C. R., Allen, G. E., Arnes-Benito, R., Sidorova, O., Gaspersz, M. P., et al. (2017) · Nature Medicine · doi:10.1038/nm.4438 · Cited by 1,471 · see citing works
Organs-on-chips at the frontiers of drug discovery
Esch, E. W., Bahinski, A., & Huh, D. (2015) · Nature Reviews Drug Discovery · doi:10.1038/nrd4539 · Cited by 1,185 · see citing works
Three-Dimensional Cell Cultures in Drug Discovery and Development
Fang, Y., & Eglen, R. M. (2017) · SLAS Discovery · doi:10.1177/1087057117696795 · Cited by 849 · see citing works
Patient-derived lung cancer organoids as in vitro cancer models for therapeutic screening
Kim, M., Mun, H., Sung, C. O., Cho, E. J., Jeon, H.-J., Chun, S.-M., Jung, D. J., Shin, T. H., Jeong, G. S., Kim, D. K., et al. (2019) · Nature Communications · doi:10.1038/s41467-019-11867-6 · Cited by 812 · see citing works
Modes of cancer cell invasion and the role of the microenvironment
Clark, A. G., & Vignjevic, D. M. (2015) · Current Opinion in Cell Biology · doi:10.1016/j.ceb.2015.06.004 · Cited by 743 · see citing works
Hubert, C. G., Rivera, M., Spangler, L. C., Wu, Q., Mack, S. C., Prager, B. C., Couce, M., McLendon, R. E., Sloan, A. E., & Rich, J. N. (2016) · Cancer Research · doi:10.1158/0008-5472.can-15-2402 · Cited by 673 · see citing works
Organoids: A historical perspective of thinking in three dimensions
Simian, M., & Bissell, M. J. (2017) · Journal of Cell Biology · doi:10.1083/jcb.201610056 · Cited by 620 · see citing works
Raja, W. K., Mungenast, A. E., Lin, Y.-T., Ko, T., Abdurrob, F., Seo, J., & Tsai, L.-H. (2016) · PLOS ONE · doi:10.1371/journal.pone.0161969 · Cited by 569 · see citing works
Screening out irrelevant cell-based models of disease
Horvath, P., Aulner, N., Bickle, M., Davies, A. M., Nery, E. D., Ebner, D., Montoya, M. C., Östling, P., Pietiäinen, V., Price, L. S., et al. (2016) · Nature Reviews Drug Discovery · doi:10.1038/nrd.2016.175 · Cited by 525 · see citing works
Organotypic brain slice cultures: A review
Humpel, C. (2015) · Neuroscience · doi:10.1016/j.neuroscience.2015.07.086 · Cited by 480 · see citing works
Takebe, T., & Wells, J. M. (2019) · Science · doi:10.1126/science.aaw7567 · Cited by 417 · see citing works
Tsai, S., McOlash, L., Palen, K., Johnson, B., Duris, C., Yang, Q., Dwinell, M. B., Hunt, B., Evans, D. B., Gershan, J., et al. (2018) · BMC Cancer · doi:10.1186/s12885-018-4238-4 · Cited by 400 · see citing works
Vascularized cancer on a chip: the effect of perfusion on growth and drug delivery of tumor spheroid
Nashimoto, Y., Okada, R., Hanada, S., Arima, Y., Nishiyama, K., Miura, T., & Yokokawa, R. (2020) · Biomaterials · doi:10.1016/j.biomaterials.2019.119547 · Cited by 332 · see citing works
Microenvironmental Determinants of Pancreatic Cancer
Heßmann, E., Buchholz, S., Demir, İ. E., Singh, S. K., Gress, T. M., Ellenrieder, V., & Neeße, A. (2020) · Physiological Reviews · doi:10.1152/physrev.00042.2019 · Cited by 329 · see citing works
Building consensus on definition and nomenclature of hepatic, pancreatic, and biliary organoids
Marsee, A., Roos, F. J. M., Verstegen, M. M. A., Marsee, A., Roos, F., Verstegen, M., Clevers, H., Vallier, L., Takebe, T., Huch, M., et al. (2021) · Cell Stem Cell · doi:10.1016/j.stem.2021.04.005 · Cited by 310 · see citing works
Tumor organoids: applications in cancer modeling and potentials in precision medicine
Xu, H., Jiao, D., Liu, A., & Wu, K. (2022) · Journal of Hematology & Oncology · doi:10.1186/s13045-022-01278-4 · Cited by 286 · see citing works
3D neural tissue models: From spheroids to bioprinting
Zhuang, P., Sun, A. X., An, J., Chua, C. K., & Chew, S. Y. (2017) · Biomaterials · doi:10.1016/j.biomaterials.2017.10.002 · Cited by 269 · see citing works
Integrating perfusable vascular networks with a three-dimensional tissue in a microfluidic device
Nashimoto, Y., Hayashi, T., Kunita, I., Nakamasu, A., Torisawa, Y.-S., Nakayama, M., Takigawa-Imamura, H., Kotera, H., Nishiyama, K., Miura, T., et al. (2017) · Integrative Biology · doi:10.1039/c7ib00024c · Cited by 266 · see citing works
Microbiome in Colorectal Cancer: How to Get from Meta-omics to Mechanism?
Ternes, D., Karta, J., Tsenkova, M., Wilmes, P., Haan, S., & Letellier, E. (2020) · Trends in Microbiology · doi:10.1016/j.tim.2020.01.001 · Cited by 256 · see citing works
Organoid Models of Human Gastrointestinal Development and Disease
Dedhia, P. H., Bertaux‐Skeirik, N., Zavros, Y. L., & Spence, J. R. (2016) · Gastroenterology · doi:10.1053/j.gastro.2015.12.042 · Cited by 246 · see citing works
Programmed synthesis of three-dimensional tissues
Todhunter, M. E., Jee, N. Y., Hughes, A. J., Coyle, M. C., Cerchiari, A. E., Farlow, J., Garbe, J. C., LaBarge, M. A., Desai, T. A., & Gartner, Z. J. (2015) · Nature Methods · doi:10.1038/nmeth.3553 · Cited by 243 · see citing works
Organ‐on‐chip models: Implications in drug discovery and clinical applications
Mittal, R., Woo, F. W., Castro, C. S., Cohen, M. A., Karanxha, J., Mittal, J., Chhibber, T., & Jhaveri, V. M. (2018) · Journal of Cellular Physiology · doi:10.1002/jcp.27729 · Cited by 235 · see citing works
Multiplexed Epitope-Based Tissue Imaging for Discovery and Healthcare Applications
Bodenmiller, B. (2016) · Cell Systems · doi:10.1016/j.cels.2016.03.008 · Cited by 230 · see citing works
Stem cell-derived organoids and their application for medical research and patient treatment
Bartfeld, S., & Clevers, H. C. (2017) · Journal of Molecular Medicine · doi:10.1007/s00109-017-1531-7 · Cited by 219 · see citing works
Organoids for Drug Discovery and Personalized Medicine
Takahashi, T. (2018) · The Annual Review of Pharmacology and Toxicology · doi:10.1146/annurev-pharmtox-010818-021108 · Cited by 202 · see citing works
Jo, Y., Choi, N., Kim, K., Koo, H., Choi, J. H., & Kim, H. N. (2018) · Theranostics · doi:10.7150/thno.29098 · Cited by 185 · see citing works
In Vitro three-dimensional (3D) cell culture tools for spheroid and organoid models
Lee, S., Koo, I.-S., Hwang, H. J., & Lee, D. W. (2023) · SLAS DISCOVERY · doi:10.1016/j.slasd.2023.03.006 · Cited by 184 · see citing works
Advances in Engineering Human Tissue Models
Moysidou, C., Barberio, C., & Owens, R. M. (2021) · Frontiers in Bioengineering and Biotechnology · doi:10.3389/fbioe.2020.620962 · Cited by 182 · see citing works
Stachowiak, E. K., Benson, C. A., Narla, S. T., Dimitri, A., Chuye, L. E. B., Dhiman, S., Harikrishnan, K., Elahi, S., Freedman, D., Brennand, K. J., et al. (2017) · Translational Psychiatry · doi:10.1038/s41398-017-0054-x · Cited by 179 · see citing works
Prantil-Baun, R., Novak, R., Das, D., Somayaji, M. R., Przekwas, A., & Ingber, D. E. (2018) · Annual Review of Pharmacology and Toxicology · doi:10.1146/annurev-pharmtox-010716-104748 · Cited by 176 · see citing works
Testicular organoid generation by a novel in vitro three-layer gradient system
Alves-Lopes, J. P., Söder, O., & Stukenborg, J. (2017) · Biomaterials · doi:10.1016/j.biomaterials.2017.03.025 · Cited by 176 · see citing works
Somatic cell-derived organoids as prototypes of human epithelial tissues and diseases
Fujii, M., & Sato, T. (2020) · Nature Materials · doi:10.1038/s41563-020-0754-0 · Cited by 165 · see citing works
Rapid 3D Extrusion of Synthetic Tumor Microenvironments
Grolman, J. M., Zhang, D., Smith, A. M., Moore, J. S., & Kilian, K. A. (2015) · Advanced Materials · doi:10.1002/adma.201501729 · Cited by 163 · see citing works
Innovative Human Three-Dimensional Tissue-Engineered Models as an Alternative to Animal Testing
Bédard, P., Gauvin, S., Ferland, K., Caneparo, C., Pellerin, È., Chabaud, S., & Bolduc, S. (2020) · Bioengineering · doi:10.3390/bioengineering7030115 · Cited by 160 · see citing works
Barrila, J., Crabbé, A., Yang, J., Franco, K., Nydam, S. D., Forsyth, R. J., Davis, R. R., Gangaraju, S., Ott, C. M., Coyne, C. B., et al. (2018) · Infection and Immunity · doi:10.1128/iai.00282-18 · Cited by 159 · see citing works
The biology of beta human papillomaviruses
Tommasino, M. (2016) · Virus Research · doi:10.1016/j.virusres.2016.11.013 · Cited by 156 · see citing works
Engineered cell and tissue models of pulmonary fibrosis
Sundarakrishnan, A., Chen, Y. G., Black, L. D., Aldridge, B. B., & Kaplan, D. L. (2017) · Advanced Drug Delivery Reviews · doi:10.1016/j.addr.2017.12.013 · Cited by 150 · see citing works
Automated brightfield morphometry of 3D organoid populations by OrganoSeg
Borten, M. A., Bajikar, S. S., Sasaki, N., Clevers, H. C., & Janes, K. A. (2018) · Scientific Reports · doi:10.1038/s41598-017-18815-8 · Cited by 150 · see citing works
Understanding cell‐cell communication and signaling in the colorectal cancer microenvironment
AlMusawi, S., Ahmed, M., & Nateri, A. S. (2021) · Clinical and Translational Medicine · doi:10.1002/ctm2.308 · Cited by 150 · see citing works
Cell polarity signaling in the plasticity of cancer cell invasiveness
Gandalovičová, A., Vomastek, T., Rösel, D., & Brábek, J. (2016) · Oncotarget · doi:10.18632/oncotarget.7214 · Cited by 149 · see citing works
Raimondi, I., Izzo, L., Tunesi, M., Comar, M., Albani, D., & Giordano, C. (2020) · Frontiers in Bioengineering and Biotechnology · doi:10.3389/fbioe.2019.00435 · Cited by 147 · see citing works
Emerging Biotechnology Applications of Aqueous Two‐Phase Systems
Teixeira, A. G., Agarwal, R., Ko, K. R., Grant‐Burt, J., Leung, B. M., & Frampton, J. P. (2017) · Advanced Healthcare Materials · doi:10.1002/adhm.201701036 · Cited by 146 · see citing works
Kassis, T., Hernandez‐Gordillo, V., Langer, R., & Griffith, L. G. (2019) · Scientific Reports · doi:10.1038/s41598-019-48874-y · Cited by 141 · see citing works
Qin, X., Wang, X., Rottmar, M., Nelson, B. J., & Maniura‐Weber, K. (2018) · Advanced Materials · doi:10.1002/adma.201705564 · Cited by 137 · see citing works
Organic Bioelectronics for In Vitro Systems
Pitsalidis, C., Pappa, A., Boys, A. J., Fu, Y., Moysidou, C., van Niekerk, D. C., Sáez, J., Savva, A., Iandolo, D., & Owens, R. M. (2021) · Chemical Reviews · doi:10.1021/acs.chemrev.1c00539 · Cited by 137 · see citing works
Harms, M., Li, Q., Lee, S., Zhang, C., Kull, B., Hallén, S., Thorell, A., Alexandersson, I., Hagberg, C. E., Peng, X., et al. (2019) · Cell Reports · doi:10.1016/j.celrep.2019.03.026 · Cited by 131 · see citing works
Human airway organoids and microplastic fibers: A new exposure model for emerging contaminants
Winkler, A., Cherubini, A., Rusconi, F., Santo, N., Madaschi, L., Pistoni, C., Moschetti, G., Sarnicola, M. L., Crosti, M., Rosso, L., et al. (2022) · Environment International · doi:10.1016/j.envint.2022.107200 · Cited by 131 · see citing works
Synthetic hydrogels mimicking basement membrane matrices to promote cell-matrix interactions
Cruz‐Acuña, R., & Garcı́a, A. J. (2016) · Matrix Biology · doi:10.1016/j.matbio.2016.06.002 · Cited by 130 · see citing works
Conducting Polymer Scaffolds for Hosting and Monitoring 3D Cell Culture
Inal, S., Hama, A., Ferro, M. P., Pitsalidis, C., Oziat, J., Iandolo, D., Pappa, A., Hadida, M., Huerta, M., Marchat, D., et al. (2017) · Advanced Biosystems · doi:10.1002/adbi.201700052 · Cited by 123 · see citing works
Davies, E. J., Dong, M., Gutekunst, M., Närhi, K. M., Zoggel, H. J. A. A. V., Blom, S., Nagaraj, A. S., Metsalu, T., Oswald, E., Erkens‐Schulze, S., et al. (2015) · Scientific Reports · doi:10.1038/srep17187 · Cited by 122 · see citing works
Hydrogel-in-hydrogel live bioprinting for guidance and control of organoids and organotypic cultures
Urciuolo, A., Giobbe, G. G., Dong, Y., Michielin, F., Brandolino, L., Magnussen, M., Gagliano, O., Selmin, G., Scattolini, V., Raffa, P., et al. (2023) · Nature Communications · doi:10.1038/s41467-023-37953-4 · Cited by 121 · see citing works
Drug Discovery Approaches Utilizing Three-Dimensional Cell Culture
Ryan, S.-L., Baird, A., Vaz, G. M. F., Urquhart, A. J., Senge, M. O., Richard, D. J., O'Byrne, K. J., & Davies, A. M. (2016) · Assay and Drug Development Technologies · doi:10.1089/adt.2015.670 · Cited by 120 · see citing works
Karolak, A. M., Markov, D. A., McCawley, L. J., & Rejniak, K. A. (2018) · Journal of The Royal Society Interface · doi:10.1098/rsif.2017.0703 · Cited by 118 · see citing works
Human biomimetic liver microphysiology systems in drug development and precision medicine
Gough, A., Soto-Gutierrez, A., Vernetti, L., Ebrahimkhani, M. R., Stern, A. M., & Taylor, D. L. (2021) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/s41575-020-00386-1 · Cited by 117 · see citing works
Combinatorial therapy in tumor microenvironment: Where do we stand?
Kumari, S., Advani, D., Sharma, S., Ambasta, R. K., & Kumar, P. (2021) · Biochimica et Biophysica Acta (BBA) - Reviews on Cancer · doi:10.1016/j.bbcan.2021.188585 · Cited by 116 · see citing works
Organoids and the genetically encoded self‐assembly of embryonic stem cells
Turner, D. A., Baillie‐Johnson, P., & Arias, A. M. (2015) · BioEssays · doi:10.1002/bies.201500111 · Cited by 115 · see citing works
Wnt and Neuregulin1/ErbB signalling extends 3D culture of hormone responsive mammary organoids
Jardé, T., Lloyd‐Lewis, B., Thomas, M., Kendrick, H. D., Melchor, L., Bougaret, L., Watson, P., Ewan, K., Smalley, M. J., & Dale, T. C. (2016) · Nature Communications · doi:10.1038/ncomms13207 · Cited by 114 · see citing works
On human pluripotent stem cell control: The rise of 3D bioengineering and mechanobiology
Shao, Y., Sang, J., & Fu, J. (2015) · Biomaterials · doi:10.1016/j.biomaterials.2015.01.078 · Cited by 113 · see citing works
Microtubules in 3D cell motility
Bouchet, B. P., & Akhmanova, A. S. (2017) · Journal of Cell Science · doi:10.1242/jcs.189431 · Cited by 112 · see citing works
The molecular basis of mammary gland development and epithelial differentiation
Slepicka, P. F., Somasundara, A. V. H., & dos Santos, C. O. (2020) · Seminars in Cell and Developmental Biology · doi:10.1016/j.semcdb.2020.09.014 · Cited by 112 · see citing works
Glioblastoma stem cell differentiation into endothelial cells evidenced through live-cell imaging
Mei, X., Chen, Y.-S., Chen, F., Xi, S., & Chen, Z.-P. (2017) · Neuro-Oncology · doi:10.1093/neuonc/nox016 · Cited by 110 · see citing works
Application of a 3D Bioprinted Hepatocellular Carcinoma Cell Model in Antitumor Drug Research
Sun, L., Yang, H., Wang, Y., Zhang, X., Jin, B., Xie, F., Jin, Y., Pang, Y., Zhao, H., Lu, X., et al. (2020) · Frontiers in Oncology · doi:10.3389/fonc.2020.00878 · Cited by 109 · see citing works
Seidlitz, T., Koo, B., & Stange, D. E. (2020) · Cell Death and Differentiation · doi:10.1038/s41418-020-00662-2 · Cited by 108 · see citing works
Stem Cells: A Renaissance in Human Biology Research
Wu, J., & Belmonte, J. C. I. (2016) · Cell · doi:10.1016/j.cell.2016.05.043 · Cited by 107 · see citing works
Zhao, Y., Li, S., Zhu, L., Huang, M., Xie, Y., Song, X., Chen, Z., Lau, H. C.-H., Sung, J. J.-Y., Xu, L., et al. (2024) · Cell Reports Medicine · doi:10.1016/j.xcrm.2024.101627 · Cited by 106 · see citing works
Three dimensional in vitro models of cancer: Bioprinting multilineage glioblastoma models
Hermida, M. A., Kumar, J. D., Schwarz, D., Laverty, K. G., Bartolo, A. D., Ardron, M., Bogomolnijs, M., Clavreul, A., Brennan, P. M., Wiegand, U. K., et al. (2019) · Advances in Biological Regulation · doi:10.1016/j.jbior.2019.100658 · Cited by 105 · see citing works
Badr-Eldin, S. M., Aldawsari, H. M., Kotta, S., Deb, P. K., & Venugopala, K. N. (2022) · Pharmaceuticals · doi:10.3390/ph15080926 · Cited by 103 · see citing works
Three‐Dimensional Models of the Human Brain Development and Diseases
Jorfi, M., D’Avanzo, C., Kim, D. Y., & Irimia, D. (2017) · Advanced Healthcare Materials · doi:10.1002/adhm.201700723 · Cited by 102 · see citing works
Engineered Microsystems for Spheroid and Organoid Studies
Kang, S., Kim, D., Lee, J., Takayama, S., & Park, J. Y. (2021) · Advanced Healthcare Materials · doi:10.1002/adhm.202001284 · Cited by 100 · see citing works
Saglam‐Metiner, P., İz, S. G., & Avcı, Ç. B. (2018) · Gene · doi:10.1016/j.gene.2018.11.058 · Cited by 100 · see citing works
Cantor, J. R. (2019) · Trends in Cell Biology · doi:10.1016/j.tcb.2019.08.009 · Cited by 100 · see citing works
Patterned cell and matrix dynamics in branching morphogenesis
Wang, S., Sekiguchi, R., Daley, W. P., & Yamada, K. M. (2017) · The Journal of Cell Biology · doi:10.1083/jcb.201610048 · Cited by 99 · see citing works
Organoids of the female reproductive tract
Chumduri, C., & Turco, M. Y. (2021) · Journal of Molecular Medicine · doi:10.1007/s00109-020-02028-0 · Cited by 99 · see citing works
Roca, M., Alcoriza‐Balaguer, M. I., García‐Cañaveras, J. C., & Lahoz, A. (2020) · Analytica Chimica Acta · doi:10.1016/j.aca.2020.12.025 · Cited by 94 · see citing works
Primary Mammary Organoid Model of Lactation and Involution
Sumbal, J., Chiche, A., Charifou, E., Koledova, Z. S., & Li, H. (2020) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2020.00068 · Cited by 93 · see citing works
Development and application of human adult stem or progenitor cell organoids
Rookmaaker, M. B., Schutgens, F., Verhaar, M. C., & Clevers, H. C. (2015) · Nature Reviews Nephrology · doi:10.1038/nrneph.2015.118 · Cited by 88 · see citing works
The potential of organoids in urological cancer research
Wang, S., Gao, D., & Chen, Y. (2017) · Nature Reviews Urology · doi:10.1038/nrurol.2017.65 · Cited by 87 · see citing works
Bajikar, S. S., Wang, C., Borten, M. A., Pereira, E. J., Atkins, K. A., & Janes, K. A. (2017) · Developmental Cell · doi:10.1016/j.devcel.2017.10.027 · Cited by 86 · see citing works
Human brain metastatic stroma attracts breast cancer cells via chemokines CXCL16 and CXCL12
Chung, B., Esmaeili, A. A., Gopalakrishna-Pillai, S., Murad, J. P., Andersen, E. S., Reddy, N. K., Srinivasan, G., Armstrong, B., Chu, C. T., Kim, Y., et al. (2017) · npj Breast Cancer · doi:10.1038/s41523-017-0008-8 · Cited by 85 · see citing works
Huang, W., Navarro-Serer, B., Jeong, Y. J., Chianchiano, P. E., Xia, L., Luchini, C., Veronese, N., Dowiak, C., Ng, T., Trujillo, M. A. M., et al. (2020) · Cancer Research · doi:10.1158/0008-5472.can-19-1523 · Cited by 85 · see citing works
Self-citationOrganoids as Models for Neoplastic Transformation
Neal, J. T., & Kuo, C. J. (2016) · Annual Review of Pathology Mechanisms of Disease · doi:10.1146/annurev-pathol-012615-044249 · Cited by 85 · see citing works
Varone, A., Nguyen, J. K., Leng, L., Barrile, R., Sliz, J. D., Lucchesi, C., Wen, N., Gravanis, A., Hamilton, G. A., Karalis, K., et al. (2021) · Biomaterials · doi:10.1016/j.biomaterials.2021.120957 · Cited by 83 · see citing works
Bioprinting Methods for Fabricating In Vitro Tubular Blood Vessel Models
Kim, S. J., Kim, M.-G., Kim, J., Jeon, J. S., Park, J., & Yi, H. (2023) · Cyborg and Bionic Systems · doi:10.34133/cbsystems.0043 · Cited by 81 · see citing works
Rodenhizer, D., Dean, T., D'Arcangelo, E., & McGuigan, A. P. (2018) · Advanced Healthcare Materials · doi:10.1002/adhm.201701174 · Cited by 80 · see citing works
Conditional Reprogramming for Patient-Derived Cancer Models and Next-Generation Living Biobanks
Palechor-Ceron, N., Krawczyk, E., Dakic, A., Simić, V., Yuan, H., Blancato, J. K., Wang, W., Hubbard, F. A., Zheng, Y., Dan, H., et al. (2019) · Cells · doi:10.3390/cells8111327 · Cited by 80 · see citing works
Scaffold‐Free Liver‐On‐A‐Chip with Multiscale Organotypic Cultures
Weng, Y., Chang, S., Shih, M., Tseng, S., & Lai, C. (2017) · Advanced Materials · doi:10.1002/adma.201701545 · Cited by 80 · see citing works
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Koledova, Z. S. (2017) · Methods in molecular biology · doi:10.1007/978-1-4939-7021-6_1 · Cited by 79 · see citing works
Rijal, G., & Li, W. (2018) · Journal of Biological Engineering · doi:10.1186/s13036-018-0114-7 · Cited by 79 · see citing works
Son, M., Sim, H., Son, Y., Jung, K. B., Lee, M. ‐., Oh, J., Chung, S. ‐., Jung, C., & Kim, J. (2017) · Neuropathology and Applied Neurobiology · doi:10.1111/nan.12396 · Cited by 78 · see citing works
Drug Discovery Goes Three-Dimensional: Goodbye to Flat High-Throughput Screening?
Eglen, R. M., & Randle, D. H. (2015) · Assay and Drug Development Technologies · doi:10.1089/adt.2015.647 · Cited by 78 · see citing works
A 3D co-culture microtissue model of the human placenta for nanotoxicity assessment
Muoth, C., Wichser, A., Monopoli, M. P., Correia, M., Ehrlich, N., Loeschner, K., Gallud, A., Kucki, M., Diener, L., Manser, P., et al. (2016) · Nanoscale · doi:10.1039/c6nr06749b · Cited by 76 · see citing works
Stem Cell-Based Therapies for Liver Diseases: An Overview and Update
Wang, J., Sun, M., Liu, W., Li, Y., & Li, M. (2019) · Tissue Engineering and Regenerative Medicine · doi:10.1007/s13770-019-00178-y · Cited by 76 · see citing works
Yamanaka, M., Teranishi, T., Kawagoe, H., & Nishizawa, N. (2016) · Scientific Reports · doi:10.1038/srep31715 · Cited by 76 · see citing works
3D high throughput screening and profiling of embryoid bodies in thermoformed microwell plates
Vrij, E., Espinoza, S., Heilig, M. A., Kolew, A., Schneider, M., van Blitterswijk, C., Truckenmüller, R. K., & Rivron, N. C. (2016) · Lab on a Chip · doi:10.1039/c5lc01499a · Cited by 75 · see citing works
Takahashi, N., Hoshi, H., Higa, A., Hiyama, G., Tamura, H., Ogawa, M., Takagi, K., Goda, K., Okabe, N., Muto, S., et al. (2019) · Cells · doi:10.3390/cells8050481 · Cited by 75 · see citing works
Neural Lineage Differentiation From Pluripotent Stem Cells to Mimic Human Brain Tissues
Hong, Y. J., & Tae, J. (2019) · Frontiers in Bioengineering and Biotechnology · doi:10.3389/fbioe.2019.00400 · Cited by 74 · see citing works
Multicomponent hydrogels for the formation of vascularized bone-like constructs in vitro
Derkuş, B., Okesola, B. O., Barrett, D. W., D’Este, M., Chowdhury, T. T., Eglin, D., & Mata, Á. (2020) · Acta Biomaterialia · doi:10.1016/j.actbio.2020.03.025 · Cited by 74 · see citing works
Engineered tissues and strategies to overcome challenges in drug development
Khalil, A. S., Jaenisch, R., & Mooney, D. J. (2020) · Advanced Drug Delivery Reviews · doi:10.1016/j.addr.2020.09.012 · Cited by 74 · see citing works
- Authors
- Shamir, E. R., & Ewald, A. J.
- Affiliations
- Johns Hopkins University (US)
- Corresponding author
- Ewald, Andrew J.
- Venue
- Nature Reviews Molecular Cell Biology
- Published
- 2014-09-17
- Volume
- 15
- Issue
- 10
- Pages
- 647-664
- ISSN
- 1471-0072 (ISSN-L)
- 1471-0080
- PMC
- PMC4352326
- OpenAlex
- W2052700237
- Cited by
- 719
- References
- 199
- Citations by year
- 2026: 19 · 2025: 40 · 2024: 41 · 2023: 51 · 2022: 67 · 2021: 71 · 2020: 95 · 2019: 64 · 2018: 71 · 2017: 90 · 2016: 74 · 2015: 36
- FWCI
- 5.73
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature Reviews Molecular Cell Biology (publishedVersion)
- PubMed (publishedVersion)
- Helmholtz Centre for Ocean Research Kiel (GEOMAR) (acceptedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- Funders
- National Cancer Institute (U01CA155758, P30CA006973)
- National Institute of General Medical Sciences (T32GM007309)
- Topics
- Physical Sciences › Engineering › Biomedical Engineering › 3D Printing in Biomedical Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular Mechanics and Interactions
- Health Sciences › Medicine › Oncology › Cancer Cells and Metastasis
- Keywords
- organotypic culture, 3D cell culture, epithelial morphogenesis, micro-environmental factors, organ models, tissue engineering, patient-derived cells, disease models, therapeutic testing
- MeSH terms
- Animals, Epithelial Cells, Epithelium, Gene Expression Regulation, Mammals, Morphogenesis, Organ Culture Techniques, Cell Culture Techniques, Cell Proliferation, Cellular Microenvironment
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