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InterProScan – an integration platform for the signature-recognition methods in InterPro
Open accessAbstract
Summary: InterProScan is a tool that scans given protein sequences against the protein signatures of the InterPro member databases, currently – PROSITE, PRINTS, Pfam, ProDom and SMART. The number of signature databases and their associated scanning tools as well as the further refinement procedures make the problem complex. InterProScan is designed to be a scalable and extensible system with a robust internal architecture. Availability: The Perl-based InterProScan implementation is available from the EBI ftp server (ftp://ftp.ebi.ac.uk/pub/software/unix/iprscan/) and the SRS-basedInterProScan is available upon request. We provide the public web interface (http://www.ebi.ac.uk/interpro/scan.html) as well as email submission server (interproscan@ebi.ac.uk). Contact: Evgueni.Zdobnov@EBI.ac.uk * To whom correspondence should be addressed.
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Metadata
- Authors
- Zdobnov, E. M., & Apweiler, R.
- Venue
- Bioinformatics
- Publisher
- Oxford University Press (OUP)
- Published
- 2001-09-01
- Volume
- 17
- Issue
- 9
- Pages
- 847-848
- ISSN
- 1367-4803 (ISSN-L)
- 1367-4811
- OpenAlex
- W2022366078
- Cited by
- 2,939
- References
- 1
- FWCI
- 11.07
- Type
- journal article
- Language
- en
- Open access
- green
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