Population phenomena inflate genetic associations of complex social traits
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In this paper, we review and demonstrate how population phenomena can inflate genotype-phenotype associations.
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GWAS associations can be interpreted as estimates of direct individual genetic effects, that is, the effect of inheriting a genetic variant (or a correlated variant) on a phenotype.
“GWAS associations can be interpreted as estimates of direct individual genetic effects, that is, the effect of inheriting a genetic variant (or a correlated variant) on a phenotype4–6.”
From Within-sibship genome-wide association analyses decrease bias in estimates of direct genetic effects (2022) · cites this paper as [4]
The Introduction (Estimation of genotype-phenotype associations; page unavailable) identifies individual-level variant substitution effects as the usual target of genotype–phenotype analyses and describes GWAS associations as per-SNP estimates. But the Discussion (page unavailable) cautions that a genetic association does not necessarily imply such an effect: population stratification, assortative mating, and dynastic effects can confound it. The claim omits that qualification on interpreting GWAS associations as direct effects. (LLM, conf=0.85)
Experimental — accuracy not yet measuredPre-registration of study protocols has not been widely adopted in observational epidemiology, although it could in principle be applied and help protect against bias such as publication bias against null results or findings that do not fit the anticipated conclusion.
“Pre-registration of study protocols has not been widely adopted in observational epidemiology, although it could in principle be applied and help protect against bias, such as publication bias against null results or findings that do not fit with the anticipated conclusion.161,162”
From Mendelian randomization (2022) · cites this paper as [162]
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Morris, T., Dorling, D., & Smith, G. D. (2016) · Contemporary Social Science · doi:10.1080/21582041.2016.1138502 · Cited by 41 · see citing works
Self-citationThe causal meaning of Fisher's average effect
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Social inequality and assortative mating: Cause or consequence?
Heath, A. C., Eaves, L. J., Nance, W. E., & Corey, L. A. (1987) · Behavior Genetics · doi:10.1007/bf01066007 · Cited by 30 · see citing works
Testing the validity of value‐added measures of educational progress with genetic data
Morris, T., Davies, N. M., Dorling, D., Richmond, R. C., & Smith, G. D. (2018) · British Educational Research Journal · doi:10.1002/berj.3466 · Cited by 29 · see citing works
Self-citationDavies, N. M., Hemani, G., Timpson, N. J., Windmeijer, F. A. G., & Smith, G. D. (2015) · Scientific Reports · doi:10.1038/srep16509 · Cited by 16 · see citing works
Self-citationA brief note on the resemblance between relatives in the presence of population stratification
Sebro, R., & RISCH, N. J. (2012) · Heredity · doi:10.1038/hdy.2011.124 · Cited by 13 · see citing works
de Vlaming, R., Okbay, A., Rietveld, C. A., Johannesson, M., Magnusson, P. K. E., Uitterlinden, A. G., van Rooij, F. J. A., Hofman, A., Groenen, P. J. F., Thurik, A. R., et al. (2017) · PLOS Genetics · doi:10.1371/journal.pgen.1006495 · Cited by 8 · see citing works
Kendler, K. S., Ohlsson, H., Sundquist, J., & Sundquist, K. (2019) · Psychological Medicine · doi:10.1017/s0033291719000874 · Cited by 6 · see citing works
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- [49]D. Wilson, G. Bridge, School choice and equality of opportunity: An international systematic review (Report for the Nuffield Foundation, 2019).
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Sanderson, E., Glymour, M. M., Holmes, M. V., Kang, H., Morrison, J., Munafò, M. R., Palmer, T., Schooling, C. M., Wallace, C., Zhao, Q., et al. (2022) · Nature Reviews Methods Primers · doi:10.1038/s43586-021-00092-5 · Cited by 2,229 · see citing works
Within-sibship genome-wide association analyses decrease bias in estimates of direct genetic effects
Howe, L. J., Nivard, M. G., Morris, T. T., Hansen, A. F., Rasheed, H., Cho, Y., Chittoor, G., Ahlskog, R., Lind, P. A., Palviainen, T., et al. (2022) · Nature Genetics · doi:10.1038/s41588-022-01062-7 · Cited by 377 · see citing works
Self-citationYang, Q., Sanderson, E., Tilling, K., Borges, M. C., & Lawlor, D. A. (2019) · doi:10.1101/19009605 · Cited by 85 · see citing works
Genetic nurturing, missing heritability, and causal analysis in genetic statistics
Shen, H., & Feldman, M. W. (2020) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2015869117 · Cited by 28 · see citing works
Bird, K. A. (2021) · American Journal of Physical Anthropology · doi:10.1002/ajpa.24216 · Cited by 19 · see citing works
- Authors
- Morris, T. T., Davies, N. M., Hemani, G., & Smith, G. D.
- Affiliations
- University of Bristol (GB)
- Norwegian University of Science and Technology (NO)
- Corresponding author
- Morris, Tim T.
- Venue
- Science Advances
- Published
- 2020-04-17
- Volume
- 6
- Issue
- 16
- Pages
- eaay0328-eaay0328
- ISSN
- 2375-2548 (ISSN-L)
- PMC
- PMC7159920
- OpenAlex
- W2944638675
- Cited by
- 20
- References
- 97
- Citations by year
- 2025: 1 · 2024: 1 · 2023: 3 · 2022: 5 · 2021: 5 · 2020: 4 · 2019: 1
- FWCI
- 2.49
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- cc-by
- Locations
- Science Advances (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- NORA - Norwegian Open Research Archives (submittedVersion, cc-by)
- Explore Bristol Research (submittedVersion, cc-by)
- Funders
- Wellcome (102215/2/13/2)
- Medical Research Council (102215/2/13/2, MC_UU_12013/1, MC_UU_12013/9, MC_UU_00011/1)
- Economic and Social Research Council (ES/N000757/1, ES/S011021/1)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Associations and Epidemiology
- Social Sciences › Sociology and Political Science › Intergenerational and Educational Inequality Studies
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic and phenotypic traits in livestock
- Keywords
- population stratification, assortative mating, heritability, genetic correlation, genetic association, genotype-phenotype correlation, academic performance, parental socioeconomic position, family-based designs
- MeSH terms
- Genotype, Models, Genetic, Phenotype, Reproduction, Genetic Association Studies, Sociological Factors
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