Regulation of the HIF-1α Level Is Essential for Hematopoietic Stem Cells
Open accessAbstract
Hematopoietic stem cells (HSCs) are sustained in a specific microenvironment known as the stem cell niche. Mammalian HSCs are kept quiescent in the endosteal niche, a hypoxic zone of the bone marrow (BM). In this study, we show that normal HSCs maintain intracellular hypoxia and stabilize hypoxia-inducible factor-1alpha (HIF-1alpha) protein. In HIF-1alpha-deficient mice, the HSCs lost their cell cycle quiescence and HSC numbers decreased during various stress settings including bone marrow transplantation, myelosuppression, or aging, in a p16(Ink4a)/p19(Arf)-dependent manner. Overstabilization of HIF-1alpha by biallelic loss of an E3 ubiquitin ligase for HIF-1alpha (VHL) induced cell cycle quiescence in HSCs and their progenitors but resulted in an impairment in transplantation capacity. In contrast, monoallelic loss of VHL induced cell cycle quiescence and improved BM engraftment during bone marrow transplantation. These data indicate that HSCs maintain cell cycle quiescence through the precise regulation of HIF-1alpha levels.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Cebpa-deficient MPPGM show nearly identical patterns of overexpression in genes like Bmi1, Foxo3 and Mycn.
“Our previously published analysis (Higa et al., 2021) of Cebpa-deficient MPPGM shows nearly identical patterns of overexpression in genes like Bmi1, Foxo3 and Mycn (Tothova et al., 2007; Takubo et al., 2010; Merchant et al., 2011; Warr et al., 2013; Murakami et al., 2014; Scognamiglio et al., 2016).”
From PU.1 is required to restrain myelopoiesis during chronic inflammatory stress (2023) · cites this paper as Takubo et al., 2010
The Results passages discuss Bmi1-mediated rescue in HIF-1α-deficient stem cells and Foxo3a as a marker of quiescent stem cells (page unavailable). A search for Cebpa-deficient MPPGM, Mycn, and the claimed overexpression pattern found no passage addressing that comparison. The citing sentence identifies the analysis as Higa et al.'s own; Takubo et al. does not verify its reported pattern in our copy. (LLM, conf=0.76)
Experimental — accuracy not yet measured
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Part of this paper’s reference list could not be split into single entries.
FoxOs Are Critical Mediators of Hematopoietic Stem Cell Resistance to Physiologic Oxidative Stress
Tothova, Z., Kollipara, R., Huntly, B. J., Lee, B. H., Castrillon, D. H., Cullen, D. E., McDowell, E. P., Lazo-Kallanian, S., Williams, I. R., Sears, C., et al. (2007) · Cell · doi:10.1016/j.cell.2007.01.003 · Cited by 1,562 · see citing works
Multilineage embryonic hematopoiesis requires hypoxic ARNT activity
Adelman, D. M., Maltepe, E., & Simon, M. C. (1999) · Genes & Development · doi:10.1101/gad.13.19.2478 · Cited by 185 · see citing works
Very Low O2 Concentration (0.1%) Favors G0 Return of Dividing CD34+ Cells
Hermitte, F., Brunet de la Grange, P., Belloc, F., Praloran, V., & Ivanovic, Z. (2006) · Stem Cells · doi:10.1634/stemcells.2004-0351 · Cited by 133 · see citing works
Flagged first, then by citations
Research works printed but not linked: 33
- [2]2. Arai, F. ∙ Hirao, A. ∙ Ohmura, M. ... Tie2/angiopoietin-1 signaling regulates hematopoietic stem cell quiescence in the bone marrow niche Cell. 2004; 118:149-161 Full Text Full Text (PDF) Scopus (1608) PubMed Google Scholar
- [3]3. Cipolleschi, M.G. ∙ Dello Sbarba, P. ∙ Olivotto, M. The role of hypoxia in the maintenance of hematopoietic stem cells Blood. 1993; 82:2031-2037 Crossref PubMed Google Scholar
- [4]4. Danet, G.H. ∙ Pan, Y. ∙ Luongo, J.L. ... Expansion of human SCID-repopulating cells under hypoxic conditions J. Clin. Invest. 2003; 112:126-135 Crossref Scopus (295) PubMed Google Scholar
- [5]5. Haase, V.H. ∙ Glickman, J.N. ∙ Socolovsky, M. ... Vascular tumors in livers with targeted inactivation of the von Hippel-Lindau tumor suppressor Proc. Natl. Acad. Sci. USA. 2001; 98:1583-1588 Crossref Scopus (355) PubMed Google Scholar
- [6]6. Hackney, J.A. ∙ Moore, K.A. A functional genomics approach to hematopoietic stem cell regulation Methods Mol. Med. 2005; 105:439-452 PubMed Google Scholar
- [8]8. Iwama, A. ∙ Oguro, H. ∙ Negishi, M. ... Enhanced self-renewal of hematopoietic stem cells mediated by the polycomb gene product Bmi-1 Immunity. 2004; 21:843-851 Full Text Full Text (PDF) Scopus (449) PubMed Google Scholar
- [9]9. Jang, Y.Y. ∙ Sharkis, S.J. A low level of reactive oxygen species selects for primitive hematopoietic stem cells that may reside in the low-oxygenic niche Blood. 2007; 110:3056-3063 Crossref Scopus (719) PubMed Google Scholar
- [10]10. Kiel, M.J. ∙ Yilmaz, O.H. ∙ Iwashita, T. ... SLAM family receptors distinguish hematopoietic stem and progenitor cells and reveal endothelial niches for stem cells Cell. 2005; 121:1109-1121 Full Text Full Text (PDF) Scopus (2539) PubMed Google Scholar
- [11]11. Kim, M. ∙ Cooper, D.D. ∙ Hayes, S.F. ... Rhodamine-123 staining in hematopoietic stem cells of young mice indicates mitochondrial activation rather than dye efflux Blood. 1998; 91:4106-4117 Crossref PubMed Google Scholar
- [12]12. Kirito, K. ∙ Fox, N. ∙ Komatsu, N. ... Thrombopoietin enhances expression of vascular endothelial growth factor (VEGF) in primitive hematopoietic cells through induction of HIF-1alpha Blood. 2005; 105:4258-4263 Crossref Scopus (84) PubMed Google Scholar
- [13]13. Kranc, K.R. ∙ Schepers, H. ∙ Rodrigues, N.P. ... Cited2 is an essential regulator of adult hematopoietic stem cells Cell Stem Cell. 2009; 5:659-665 Full Text Full Text (PDF) Scopus (93) PubMed Google Scholar
- [14]14. Kubota, Y. ∙ Takubo, K. ∙ Suda, T. Bone marrow long label-retaining cells reside in the sinusoidal hypoxic niche Biochem. Biophys. Res. Commun. 2008; 366:335-339 Crossref Scopus (120) PubMed Google Scholar
- [15]15. Kuhn, R. ∙ Schwenk, F. ∙ Aguet, M. ... Inducible gene targeting in mice Science. 1995; 269:1427-1429 Crossref Scopus (1577) PubMed Google Scholar
- [16]16. Levesque, J.P. ∙ Winkler, I.G. ∙ Hendy, J. ... Hematopoietic progenitor cell mobilization results in hypoxia with increased hypoxia-inducible transcription factor-1 alpha and vascular endothelial growth factor A in bone marrow Stem Cells. 2007; 25:1954-1965 Crossref Scopus (128) PubMed Google Scholar
- [17]17. Li, L. ∙ Xie, T. Stem cell niche: Structure and function Annu. Rev. Cell Dev. Biol. 2005; 21:605-631 Crossref Scopus (995) PubMed Google Scholar
- [18]18. Liu, J. ∙ Cao, L. ∙ Chen, J. ... Bmi1 regulates mitochondrial function and the DNA damage response pathway Nature. 2009; 459:387-392 Crossref Scopus (403) PubMed Google Scholar
- [19]19. Lo Celso, C. ∙ Fleming, H.E. ∙ Wu, J.W. ... Live-animal tracking of individual haematopoietic stem/progenitor cells in their niche Nature. 2009; 457:92-96 Crossref Scopus (728) PubMed Google Scholar
- [20]20. Miyamoto, K. ∙ Araki, K.Y. ∙ Naka, K. ... Foxo3a is essential for maintenance of the hematopoietic stem cell pool Cell Stem Cell. 2007; 1:101-112 Full Text Full Text (PDF) Scopus (728) PubMed Google Scholar
- [21]21. Morrison, S.J. ∙ Spradling, A.C. Stem cells and niches: Mechanisms that promote stem cell maintenance throughout life Cell. 2008; 132:598-611 Full Text Full Text (PDF) Scopus (1583) PubMed Google Scholar
- [22]22. Naka, K. ∙ Muraguchi, T. ∙ Hoshii, T. ... Regulation of reactive oxygen species and genomic stability in hematopoietic stem cells Antioxid. Redox Signal. 2008; 10:1883-1894 Crossref Scopus (205) PubMed Google Scholar
- [23]23. Oguro, H. ∙ Yuan, J. ∙ Ichikawa, H. ... Poised lineage specification in multipotential hematopoietic stem and progenitor cells by the polycomb protein Bmi1 Cell Stem Cell. 2010; 6:279-286 Full Text Full Text (PDF) Scopus (161) PubMed Google Scholar
- [24]24. Osawa, M. ∙ Hanada, K. ∙ Hamada, H. ... Long-term lymphohematopoietic reconstitution by a single CD34-low/negative hematopoietic stem cell Science. 1996; 273:242-245 Crossref Scopus (1772) PubMed Google Scholar
- [25]25. Parmar, K. ∙ Mauch, P. ∙ Vergilio, J.A. ... Distribution of hematopoietic stem cells in the bone marrow according to regional hypoxia Proc. Natl. Acad. Sci. USA. 2007; 104:5431-5436 Crossref Scopus (700) PubMed Google Scholar
- [26]26. Pedersen, M. ∙ Lofstedt, T. ∙ Sun, J. ... Stem cell factor induces HIF-1alpha at normoxia in hematopoietic cells Biochem. Biophys. Res. Commun. 2008; 377:98-103 Crossref Scopus (61) PubMed Google Scholar
- [27]27. Ryan, H.E. ∙ Lo, J. ∙ Johnson, R.S. HIF-1 alpha is required for solid tumor formation and embryonic vascularization EMBO J. 1998; 17:3005-3015 Crossref Scopus (1374) PubMed Google Scholar
- [28]28. Scadden, D.T. The stem-cell niche as an entity of action Nature. 2006; 441:1075-1079 Crossref Scopus (1586) PubMed Google Scholar
- [30]30. Simon, M.C. ∙ Keith, B. The role of oxygen availability in embryonic development and stem cell function Nat. Rev. Mol. Cell Biol. 2008; 9:285-296 Crossref Scopus (783) PubMed Google Scholar
- [31]31. Sudo, K. ∙ Ema, H. ∙ Morita, Y. ... Age-associated characteristics of murine hematopoietic stem cells J. Exp. Med. 2000; 192:1273-1280 Crossref Scopus (580) PubMed Google Scholar
- [32]32. Sugiyama, T. ∙ Kohara, H. ∙ Noda, M. ... Maintenance of the hematopoietic stem cell pool by CXCL12-CXCR4 chemokine signaling in bone marrow stromal cell niches Immunity. 2006; 25:977-988 Full Text Full Text (PDF) Scopus (1849) PubMed Google Scholar
- [33]33. Takubo, K. ∙ Ohmura, M. ∙ Azuma, M. ... Stem cell defects in ATM-deficient undifferentiated spermatogonia through DNA damage-induced cell-cycle arrest Cell Stem Cell. 2008; 2:170-182 Full Text Full Text (PDF) Scopus (110) PubMed Google Scholar
- [34]34. Tanaka, T. ∙ Wiesener, M. ∙ Bernhardt, W. ... The human HIF (hypoxia-inducible factor)-3alpha gene is a HIF-1 target gene and may modulate hypoxic gene induction Biochem. J. 2009; 424:143-151 Crossref Scopus (95) PubMed Google Scholar
- [35]35. Tipping, A.J. ∙ Pina, C. ∙ Castor, A. ... High GATA-2 expression inhibits human hematopoietic stem and progenitor cell function by effects on cell cycle Blood. 2009; 113:2661-2672 Crossref Scopus (93) PubMed Google Scholar
- [37]37. Xie, Y. ∙ Yin, T. ∙ Wiegraebe, W. ... Detection of functional haematopoietic stem cell niche using real-time imaging Nature. 2009; 457:97-101 Crossref Scopus (441) PubMed Google Scholar
Cited by
Sorted by citations
Hypoxia-inducible factors in physiology and medicine
Semenza, G. L. (2012) · Cell · doi:10.1016/j.cell.2012.01.021 · Cited by 3,645 · see citing works
The bone marrow niche for haematopoietic stem cells
Morrison, S. J., & Scadden, D. T. (2014) · Nature · doi:10.1038/nature12984 · Cited by 2,451 · see citing works
Molecular regulation of stem cell quiescence
Cheung, T. H., & Rando, T. A. (2013) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm3591 · Cited by 1,148 · see citing works
Direct measurement of local oxygen concentration in the bone marrow of live animals
Spencer, J. A., Ferraro, F., Roussakis, E., Klein, A., Wu, J., Runnels, J. M., Zaher, W., Mortensen, L. J., Alt, C., Turcotte, R., et al. (2014) · Nature · doi:10.1038/nature13034 · Cited by 1,167 · see citing works
Metabolic Regulation of Hematopoietic Stem Cells in the Hypoxic Niche
Suda, T., Takubo, K., & Semenza, G. L. (2011) · Cell Stem Cell · doi:10.1016/j.stem.2011.09.010 · Cited by 844 · see citing works
Self-citationRegulation of Immunity and Inflammation by Hypoxia in Immunological Niches
Taylor, C. T., & Colgan, S. P. (2017) · Nature reviews. Immunology · doi:10.1038/nri.2017.103 · Cited by 713 · see citing works
Losman, J.-A., Looper, R. E., Koivunen, P., Lee, S., Schneider, R. K., McMahon, C., Cowley, G. S., Root, D. E., Ebert, B. L., & Kaelin, W. G. (2013) · Science · doi:10.1126/science.1231677 · Cited by 703 · see citing works
The autophagy protein Atg7 is essential for hematopoietic stem cell maintenance
Mortensen, M., Soilleux, E. J., Djordjevic, G., Tripp, R., Lutteropp, M., Sadighi-Akha, E., Stranks, A. J., Glanville, J., Knight, S., W. Jacobsen, S.-E., et al. (2011) · Journal of Experimental Medicine · doi:10.1084/jem.20101145 · Cited by 657 · see citing works
The updated biology of hypoxia-inducible factor
Greer, S. N., Metcalf, J. L., Wang, Y., & Ohh, M. (2012) · The EMBO Journal · doi:10.1038/emboj.2012.125 · Cited by 545 · see citing works
Beerman, I., Seita, J., Inlay, M. A., Weissman, I. L., & Rossi, D. J. (2014) · Cell Stem Cell · doi:10.1016/j.stem.2014.04.016 · Cited by 445 · see citing works
Metabolic regulation of stem cell function in tissue homeostasis and organismal ageing
Chandel, N. S., Jasper, H., Ho, T. T., & Passegué, E. (2016) · Nature Cell Biology · doi:10.1038/ncb3385 · Cited by 326 · see citing works
Mechanisms that Regulate Stem Cell Aging and Life Span
Signer, R. A. J., & Morrison, S. J. (2013) · Cell Stem Cell · doi:10.1016/j.stem.2013.01.001 · Cited by 320 · see citing works
Human T <sub>H</sub> 17 Cells Are Long-Lived Effector Memory Cells
Kryczek, I., Zhao, E., Liu, Y., Wang, Y., Vatan, L., Szeliga, W., Moyer, J., Klimczak, A., Lange, A., & Zou, W. (2011) · Science Translational Medicine · doi:10.1126/scitranslmed.3002949 · Cited by 278 · see citing works
Changes in primary lymphoid organs with aging
Chinn, I. K., Blackburn, C. C., Manley, N. R., & Sempowski, G. D. (2012) · Seminars in Immunology · doi:10.1016/j.smim.2012.04.005 · Cited by 282 · see citing works
Cellular and epigenetic drivers of stem cell ageing
Ermolaeva, M., Neri, F., Ori, A., & Rudolph, K. L. (2018) · Nature Reviews Molecular Cell Biology · doi:10.1038/s41580-018-0020-3 · Cited by 272 · see citing works
Heterochronic parabiosis for the study of the effects of aging on stem cells and their niches
Conboy, I. M., & Rando, T. A. (2012) · Cell Cycle · doi:10.4161/cc.20437 · Cited by 239 · see citing works
McNamee, E. N., Korns Johnson, D., Homann, D., & Clambey, E. T. (2013) · Immunologic Research · doi:10.1007/s12026-012-8349-8 · Cited by 234 · see citing works
Pala, F., Di Girolamo, D., Mella, S., Yennek, S., Chatre, L., Ricchetti, M., & Tajbakhsh, S. (2018) · Journal of Cell Science · doi:10.1242/jcs.212977 · Cited by 184 · see citing works
Protein neddylation and its role in health and diseases
Zhang, S., Yu, Q., Li, Z., Zhao, Y., & Sun, Y. (2024) · Signal Transduction and Targeted Therapy · doi:10.1038/s41392-024-01800-9 · Cited by 171 · see citing works
Nutrient-sensing pathways and metabolic regulation in stem cells
Ochocki, J. D., & Simon, M. C. (2013) · Journal of Cell Biology · doi:10.1083/jcb.201303110 · Cited by 140 · see citing works
Xiang, L., Gilkes, D. M., Hu, H., Takano, N., Luo, W., Lu, H., Bullen, J. W., Samanta, D., Liang, H., & Semenza, G. L. (2014) · Oncotarget · doi:10.18632/oncotarget.2997 · Cited by 119 · see citing works
Stem Cells, Redox Signaling, and Stem Cell Aging
Liang, R., & Ghaffari, S. (2014) · Antioxidants & Redox Signaling · doi:10.1089/ars.2013.5300 · Cited by 106 · see citing works
<scp>HIF</scp> 3α: the little we know
Ravenna, L., Salvatori, L., & Russo, M. A. (2016) · The FEBS Journal · doi:10.1111/febs.13572 · Cited by 97 · see citing works
A Central Role for Hypoxic Signaling in Cartilage, Bone, and Hematopoiesis
Rankin, E. B., Giaccia, A. J., & Schipani, E. (2011) · Current Osteoporosis Reports · doi:10.1007/s11914-011-0047-2 · Cited by 93 · see citing works
Fumarate hydratase is a critical metabolic regulator of hematopoietic stem cell functions
Guitart, A. V., Panagopoulou, T. I., Villacreces, A., Vukovic, M., Sepulveda, C., Allen, L., Carter, R. N., van de Lagemaat, L. N., Morgan, M., Giles, P., et al. (2017) · Journal of Experimental Medicine · doi:10.1084/jem.20161087 · Cited by 86 · see citing works
Wang, Y., Liu, Y., Tang, F., Bernot, K. M., Schore, R., Marcucci, G., Caligiuri, M. A., Zheng, P., & Liu, Y. (2014) · Blood · doi:10.1182/blood-2013-12-544221 · Cited by 69 · see citing works
DNA damage in aging, the stem cell perspective
McNeely, T., Leone, M., Yanai, H., & Beerman, I. (2020) · Human Genetics · doi:10.1007/s00439-019-02047-z · Cited by 52 · see citing works
“2011), hypoxic intracellular state (Takubo et al. 2010), and reliance on glycolytic metabolism (Simsek et al.”
BackgroundThe force is strong with this one: metabolism (Over)powers stem cell fate
Wei, P., Dove, K. K., Bensard, C., Schell, J. C., & Rutter, J. (2018) · Trends in Cell Biology · doi:10.1016/j.tcb.2018.02.007 · Cited by 47 · see citing works
Acute Myeloid Leukaemia Drives Metabolic Changes in the Bone Marrow Niche
Maynard, R. S., Hellmich, C., Bowles, K. M., & Rushworth, S. A. (2022) · Frontiers in Oncology · doi:10.3389/fonc.2022.924567 · Cited by 17 · see citing works
Tokumoto, Y., Tamaki, S., Kabe, Y., Takubo, K., & Suematsu, M. (2017) · Scientific Reports · doi:10.1038/s41598-017-01023-9 · Cited by 16 · see citing works
Self-citationPU.1 is required to restrain myelopoiesis during chronic inflammatory stress
Chavez, J. S., Rabe, J. L., Niño, K. E., Wells, H. H., Gessner, R. L., Mills, T. S., Hernandez, G., & Pietras, E. M. (2023) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2023.1204160 · Cited by 14 · see citing works
“shows nearly identical patterns of overexpression in genes like Bmi1, Foxo3 andMycn (Tothova et al., 2007; Takubo et al., 2010; Merchant et al., 2011; Warr et al., 2013; Murakami et al., 2014; Scognamiglio et al., 2016).”
Background
- Authors
- Takubo, K., Goda, N., Yamada, W., Iriuchishima, H., Ikeda, E., Kubota, Y., Shima, H., Johnson, R. S., Hirao, A., Suematsu, M., & Suda, T.
- Affiliations
- Keio University (JP)
- Waseda University (JP)
- Yamaguchi University (JP)
- University of California San Diego (US)
- Kanazawa University (JP)
- Corresponding author
- Takubo, Keiyo
- Suda, Toshio
- ORCID
- Venue
- Cell Stem Cell
- Publisher
- Elsevier BV
- Published
- 2010-09
- Volume
- 7
- Issue
- 3
- Pages
- 391-402
- ISSN
- 1875-9777 (ISSN-L)
- 1934-5909
- OpenAlex
- W2068141056
- Cited by
- 891
- References
- 3
- Citations by year
- 2026: 17 · 2025: 27 · 2024: 37 · 2023: 41 · 2022: 62 · 2021: 59 · 2020: 62 · 2019: 59 · 2018: 61 · 2017: 54 · 2016: 58 · 2015: 80 · 2014: 69 · 2013: 77 · 2012: 78
- FWCI
- 40.54
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Cell stem cell (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Japan Society for the Promotion of Science (21390290)
- Topics
- Health Sciences › Medicine › Hematology › Hematopoietic Stem Cell Transplantation
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › Cancer, Hypoxia, and Metabolism
- Health Sciences › Medicine › Genetics › Mesenchymal stem cell research
- Keywords
- hematopoietic stem cells, HIF-1α, protein stabilization, hypoxia, endosteal niche, bone marrow, cell cycle quiescence, VHL E3 ubiquitin ligase, bone marrow transplantation, myelosuppression, aging, HSC maintenance
- MeSH terms
- Animals, Hypoxia, Bone Marrow, Cell Count, Cell Cycle, Hematopoietic Stem Cells, Homeostasis, Bone Marrow Transplantation, Mice, Knockout, Mice, Hypoxia-Inducible Factor 1, alpha Subunit, Stem Cell Niche
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review