Lansoprazole interferes with fungal respiration and acts synergistically with amphotericin B against multidrug-resistant Candida auris
Open accessAbstract
Candida auris has emerged as a problematic fungal pathogen associated with high morbidity and mortality. Amphotericin B (AmB) is the most effective antifungal used to treat invasive fungal candidiasis, with resistance rarely observed among clinical isolates. However, C. auris possesses extraordinary resistant profiles against all available antifungal drugs, including AmB. In our pursuit of potential solutions, we screened a panel of 727 FDA-approved drugs. We identified the proton pump inhibitor lansoprazole (LNP) as a potent enhancer of AmB’s activity against C. auris. LNP also potentiates the antifungal activity of AmB against other medically important species of Candida and Cryptococcus. Our investigations into the mechanism of action unveiled that LNP metabolite(s) interact with a crucial target in the mitochondrial respiratory chain (complex III, known as cytochrome bc1). This interaction increases oxidative stress within fungal cells. Our results demonstrated the critical role of an active respiratory function in the antifungal activity of LNP. Most importantly, LNP restored the efficacy of AmB in an immunocompromised mouse model, resulting in a 1.7-log (∼98%) CFU reduction in the burden of C. auris in the kidneys. Our findings strongly advocate for a comprehensive evaluation of LNP as a cytochrome bc1 inhibitor for combating drug-resistant C. auris infections.
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Written from the paper’s full text.
TL;DR
Screening 727 FDA-approved drugs identified lansoprazole (LNP) as a potentiator of amphotericin B (AmB) against multidrug-resistant *Candida auris*. LNP/AmB showed broad synergy, increased ROS, targeted mitochondrial cytochrome bc1, and reduced *C. auris* kidney burden in mice.
Key findings
- LNP synergized with AmB against 90% (18/20) of *C. auris* clinical isolates, including AmB-resistant isolates; the two non-synergistic isolates still had AmB MICs reduced to susceptible levels.
- LNP (40 μg/mL) restored AmB (2 μg/mL) fungicidal activity against resistant *C. auris* within 6 hr, whereas AmB alone did not prevent growth over 24 hr.
- AmB/LNP increased ROS by 77%, compared with 29% for LNP alone and 32% for AmB alone; PISA identified mitochondrial cytochrome bc1 (complex III) as a potential LNP target.
- In an immunocompromised mouse model, AmB/LNP reduced *C. auris* kidney burden by 1.7-log (~98%) versus untreated mice and by 1 log (90%) versus AmB alone.
Methods
- In vitro screening of 727 FDA-approved drugs/clinical molecules against AmB-resistant *C. auris* AR0390, followed by checkerboard MIC assays, time-kill assays, and testing against 20 *C. auris* isolates and other *Candida*/*Cryptococcus* species.
- Mechanistic analyses included PISA proteomics, RNA-Seq, ROS measurement with H2DCFDA, *S. cerevisiae* growth assays with respiratory mutants and SOD deletions, cytochrome bc1 activity assays, and molecular docking.
- In vivo efficacy used neutropenic CD-1 mice infected with *C. auris* AR0390 and treated with vehicle, AmB (0.5 mg/kg), LNP (300 mg/kg), or AmB/LNP; kidney CFU burdens were measured.
Limitations
- Stated: elevated LNP doses were required for in vitro and in vivo synergy; LNP is unstable and yields several metabolites, so the exact active metabolite and its formation remain unknown; comprehensive toxicological studies in mice are needed.
- Evident: most *C. auris* isolates cannot grow on glycerol or ethanol, so the respiration dependence of LNP activity could not be directly tested in *C. auris*; LNP itself had hardly any direct effect on cytochrome bc1 activity, and lansoprazole sulfide was only a weak inhibitor and did not synergize with AmB.
- Evident: the in vivo kidney CFU result is described as coming from a single experiment.
Model-written summary. Check it against the paper before relying on it.
Integrity signals
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Cites
Statistics
Claims the paper makes
0 of 40 cited sources checked · 0 supported · 0 flagged
- Findingown data
Eight statistically significant proteins exhibited increased solubility in the presence of LNP.
“Proteins with increased abundance were excluded, resulting in the identification of eight statistically significant proteins that exhibited increased solubility in the presence of LNP as represented by the ΔSm distribution (Figure 2 and Table S2).”
Quote in the paperSubstantial claim - Findingown data
LNP metabolite(s) interact with a crucial target in the mitochondrial respiratory chain, complex III (cytochrome bc1).
“Our investigations into the mechanism of action unveiled that LNP metabolite(s) interact with a crucial target in the mitochondrial respiratory chain (complex III, known as cytochrome bc1).”
Quote in the paperSubstantial claim - Findingown data
LNP demonstrated a synergistic interaction with AmB in 90% (18 out of 20) of Candida auris clinical isolates.
“Notably, LNP demonstrated a synergistic interaction with AmB in 90% (18 out of 20) of the isolates.”
Quote in the paperSubstantial claim - Findingnone given
B9J08_005505 is the Candida auris ortholog of the Rieske protein, a member of the cytochrome bc1 complex, encoded by RIP1 in Candida albicans and Saccharomyces cerevisiae.
“B9J08_005505 is the C. auris ortholog of the Rieske protein, a member of cytochrome bc1 complex, which is encoded by the RIP1 gene in C. albicans and S. cerevisiae.”
Quote in the paperSubstantial claim - Findingown data
Lansoprazole (LNP) was identified as a potent enhancer of amphotericin B (AmB) activity against Candida auris.
“We identified the proton pump inhibitor lansoprazole (LNP) as a potent enhancer of AmB’s activity against C. auris.”
- Also stated in: § Drug library screen identifies LNP as a potentiator of AmB’s antifungal activity · boosted
“Thus, LNP was identified as a robust potentiator of the antifungal activity of AmB (Figure 1a).”
Quote in the paperSubstantial claim- Rests on an assumption: Lansoprazole has a favourable safety and pharmacokinetic profile.
- Also stated in: § Drug library screen identifies LNP as a potentiator of AmB’s antifungal activity · boosted
- Findingown data
The two Candida auris isolates that did not exhibit synergy also showed a reduction in the MICs of AmB to susceptible levels.
“The two isolates that did not exhibit synergy also showed a reduction in the MICs of AmB to the susceptible levels (Table 1).”
Quote in the paperNot a substantial claim - Findingown data
The fungal mitochondrial cytochrome bc1 (complex III) was identified as a potential target for LNP.
“The fungal mitochondrial cytochrome bc1 (complex III) was identified as a potential target for LNP.”
Quote in the paperSubstantial claim - Findingown data
Among the 20 Candida auris isolates, 11/20 (55%) were resistant to AmB (MIC = 2 μg/mL).
“Among these isolates, 11/20 (55%) were resistant to AmB (MIC = 2 µg/mL).”
Quote in the paperSubstantial claim - Findingown data
Tubulin is not a major target of LNP.
“Sensitivity studies using S. cerevisiae deletion strains sensitive to tubulin disruption suggest that tubulin is not a major target (Table S4).”
Quote in the paperNot a substantial claim - Findingown data
LNP (40 μg/mL) restored the fungicidal properties of AmB (2 μg/mL) against resistant Candida auris within 6 hr.
“LNP (40 μg/mL = 108 µM/mL) restored the fungicidal properties of AmB (2 μg/mL) against resistant C. auris within 6 hr.”
Quote in the paperSubstantial claim - Findingown data
AmB alone did not prevent Candida auris growth over 24 hr.
“However, AmB alone did not prevent C. auris growth over 24 hr (Figure 1b).”
Quote in the paperSubstantial claim - Findingown data
LNP potentiates the antifungal activity of AmB against other medically important species of Candida and Cryptococcus.
“LNP also potentiates the antifungal activity of AmB against other medically important species of Candida and Cryptococcus.”
Quote in the paperNot a substantial claim - Findingown data
In the presence of LNP and AmB, 90% inhibition of Candida auris growth was observed.
“In the presence of LNP and AmB, 90% inhibition of C. auris growth was observed.”
Quote in the paperSubstantial claim - Findingown data
An active respiratory function is critical for the antifungal activity of LNP.
“Our results demonstrated the critical role of an active respiratory function in the antifungal activity of LNP.”
Quote in the paperSubstantial claim - Findingown data
AmB treatment increased ROS levels compared to untreated fungal cells by 32%.
“LNP and AmB treatments increased the generated ROS levels compared to untreated fungal cells by 29% and 32%, respectively.”
Quote in the paperSubstantial claim - Findingown data
The downregulated DEGs in the LNP-treated group included orthologs to ferric reductases (FRE1, FRE2, FRE7), a copper ion transporter (CTR1), a zinc ion transporter (ZRT2), and a biotin importer (VHT1).
“The common theme amongst the downregulated DEGs was metal ion uptake because the downregulated genes included orthologs to ferric reductases (FRE1, FRE2 and FRE7), a copper ion transporter (CTR1) and a zinc ion transporter (ZRT2) (Figure 3a). Interestingly, two additional genes involved were orthologs of a C. albicans gene which is implicated as a biotin importer (VHT1).”
Quote in the paperSubstantial claim - Findingown data
Massive transcriptome changes were observed for samples treated with AmB and AmB/LNP, including 4010 and 4160 statistically significant DEGs, respectively.
“Massive transcriptome changes were observed for the samples treated with AmB and AmB/LNP, including 4010 and 4160 statistically significant DEGs, respectively, which is expected for the near subtoxic concentrations of AmB utilized.”
Quote in the paperNot a substantial claim - Findingown data
The highest dose of AmB that does not cause a significant reduction in CFU as a single daily dose is 0.5 mg/kg for two days.
“we tested different therapeutic doses of AmB and identified the highest dose that does not cause a significant reduction in CFU as a single daily dose of 0.5 mg/kg for two days (Fig. S2).”
Quote in the paperSubstantial claim - Findingown data
Only 10 DEGs (3 upregulated and 7 downregulated) were detected in the LNP-treated group.
“Remarkably, only 10 DEGs (3 upregulated and seven downregulated) were detected in the LNP-treated group (Figure 3a).”
Quote in the paperSubstantial claim - Findingown data
The AmB/LNP combination resulted in reduced weight loss in treated mice.
“The AmB/LNP combination resulted in reduced weight loss in treated mice”
Quote in the paperSubstantial claim - Findingown data
AmB and AmB/LNP compared to DMSO demonstrated similar enrichment in DEGs associated with DNA replication and repair.
“The AmB and cotreated sample of AmB/LNP, when compared to DMSO, demonstrated similar enrichment in DEGs associated with DNA replication and repair.”
Quote in the paperNot a substantial claim - Findingown data
LNP had hardly any direct effect on cytochrome bc1 activity in prepared S. cerevisiae mitochondria.
“LNP had hardly any effect on the reaction (not shown).”
- Also stated in: § Discussion · plain
“we observed that LNP had hardly any direct effect on cytochrome bc1 activity”
Quote in the paperSubstantial claim - Also stated in: § Discussion · plain
- Findingown data
LNP has an additional hydrogen bond with the sulfide oxygen and the backbone amine of Y279.
“However, LNP has an additional hydrogen bond with the sulfide oxygen and the backbone amine of Y279”
Quote in the paperNot a substantial claim - Findingown data
The LNP downregulated genes were enriched for GO terms involving metal ion transport (biological process), cell periphery (cellular component) and ferric-chelate reductase activity (molecular function).
“The LNP downregulated genes were enriched for GO terms involving metal ion transport (biological process), cell periphery (cellular component) and ferric-chelate reductase activity (molecular function).”
Quote in the paperSubstantial claim - Findingown data
The S. cerevisiae cytochrome b mutation Y279C showed substantially increased sensitivity to LNP.
“Interestingly, Y279C showed a substantially increased sensitivity to LNP (Figure 4d)”
- Also stated in: § Discussion · plain
“the cytochrome b mutation Y279C resulted in an increased sensitivity to LNP in growth assays.”
Quote in the paperSubstantial claim - Also stated in: § Discussion · plain
- Findingown data
PISA analysis identified eight potential targets for LNP, including the C. auris orthologs of S. cerevisiae RIP1 and TUB1.
“The PISA analysis identified eight potential targets for LNP, including the C. auris orthologs of S. cerevisiae RIP1 and TUB1.”
Quote in the paperSubstantial claim - Findingown data
The AmB/LNP combination was effective against other medically important fungal pathogens, including drug-resistant C. glabrata and Cryptococcus species.
“Additionally, this combination was effective against other medically important fungal pathogens, including drug-resistant C. glabrata and Cryptococcus species.”
Quote in the paperNot a substantial claim - Findingown data
Antimycin A at 0.125 μg/mL enhances the activity of AmB against C. auris AR0390 similarly to LNP.
“As expected, antimycin A (0.125 µg/mL) showed similar potential as LNP to enhance the activity of AmB against C. auris AR0390.”
Quote in the paperSubstantial claim - Findingown data
Rotenone at 40 μg/mL negates the synergistic relationship of either LNP or antimycin A with AmB.
“Our hypothesis was further supported when rotenone (40 µg/mL) negated the synergistic relationship of either LNP or antimycin A with AmB (Figure 4e).”
Quote in the paperSubstantial claim - Findingown data
Comparing AmB/LNP to AmB revealed enrichment in cellular respiration, mitochondrial organization, and ion transport under cotreatment conditions.
“However, comparing AmB/LNP to AmB revealed enrichment in cellular respiration, mitochondrial organization, and ion transport under cotreatment conditions (Table S5).”
Quote in the paperNot a substantial claim - Findingnone given
Antimycin A and atovaquone would be 1,000-fold more potent than lansoprazole sulfide in the same conditions.
“For comparison, antimycin A and atovaquone would be 1,000-fold more potent in the same conditions.”
Quote in the paperNot a substantial claim - Findingown data
The sensitivity of Δsod1 and Δsod2 mutants to LNP proved dose-dependent.
“The sensitivity of Δsod1 and Δsod2 mutants to LNP proved dose-dependent (Figure 3d).”
Quote in the paperSubstantial claim - Findingown data
Other metabolites of LNP showed worse docking scores with the wild type and tested mutants.
“Other metabolites of LNP showed worse docking scores with the wild type and tested mutants (Table S6).”
Quote in the paperNot a substantial claim - Findingown data
LNP treatment increased ROS levels compared to untreated fungal cells by 29%.
“LNP and AmB treatments increased the generated ROS levels compared to untreated fungal cells by 29% and 32%, respectively.”
Quote in the paperSubstantial claim - Findingown data
Lansoprazole sulfide acted as a weak inhibitor of cytochrome c reduction, decreasing the rate by approximately 50% at 100 μM.
“Lansoprazole sulfide acted as a weak inhibitor of the reaction. At 100 μM, the cytochrome c reduction rate was decreased by ∼50% (Figure 4c).”
Quote in the paperSubstantial claim - Findingown data
GO enrichment analysis on differentially expressed genes from LNP-treated cells highlighted the mitochondrial intermembrane space as the top Cellular Component location.
“Interestingly, the GO enrichment analysis on differentially expressed genes from LNP-treated cells highlighted the mitochondrial intermembrane space as the top Cellular Component (CC) location (Fig. S3).”
Quote in the paperNot a substantial claim - Findingreasoning
C. albicans grown in glucose medium has reduced sensitivity to LNP compared to growth in glycerol medium that favours respiration.
“the reduced sensitivity of C. albicans grown in glucose medium as compared to glycerol medium that favours respiration.”
Quote in the paperSubstantial claim - Findingown data
The common function of the genes affected by LNP alone is a cellular response to oxidative stress.
“The common function between these genes collectively is a cellular response to oxidative stress.”
Quote in the paperNot a substantial claim - Findingown data
Cells treated with LNP alone showed minimal effects, with only ten genes affected.
“In contrast, cells treated with LNP alone showed minimal effects, as only ten genes were affected.”
Quote in the paperNot a substantial claim - Findingown data
Deleting the major ROS-scavengers, superoxide dismutases, in S. cerevisiae led to a severe increase in yeast sensitivity to LNP.
“deleting the major ROS-scavengers, superoxide dismutases in S. cerevisiae led to a severe increase in yeast sensitivity to LNP.”
Quote in the paperSubstantial claim - Findingown data
Lansoprazole sulfide did not show synergy with AmB against C. auris.
“we examined the synergy between lansoprazole sulfide and AmB, but it did not show any synergy against C. auris.”
Quote in the paperNot a substantial claim - Findingown data
Molecular docking of LNP and several known metabolites to the Y279C mutant did not demonstrate greatly enhanced binding compared to the wild-type protein.
“Molecular docking of LNP and several known metabolites to Y279C mutant did not demonstrate greatly enhanced binding compared to the wild-type protein.”
Quote in the paperNot a substantial claim- Rests on an assumption: The mutated residues are located in the Qo site formed by cytochrome b interacting with the Rieske protein to create the ubiquinol oxidation site within the cytochrome bc1 complex.
- Findingown data
The S. cerevisiae rho° mutant lacking a respiratory chain has decreased sensitivity to LNP compared to its parent strain.
“the decreased sensitivity of S. cerevisiae rho° mutant (lacking a respiratory chain) to LNP as compared to its parent strain”
Quote in the paperSubstantial claim - Findingown data
Rotenone and antimycin A enhanced the antifungal activity of AmB against C. auris.
“In line with our hypothesis, rotenone and antimycin A enhanced the antifungal activity of AmB against C. auris.”
Quote in the paperSubstantial claim - Interpretationreasoning
The interaction of LNP metabolite(s) with cytochrome bc1 increases oxidative stress within fungal cells.
“This interaction increases oxidative stress within fungal cells.”
Quote in the paperSubstantial claim - Premisecitation
30% of circulating Candida auris isolates are resistant to amphotericin B.
“However, C. auris is an exception because 30% of the circulating C. auris isolates are resistant to AmB [21].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [21] Chaabane F, Graf A, Jequier L, et al. Review on antifungal resistance mechanisms in the emerging pathogen Candida auris. Front Microbiol. 2019; 10: 2788. doi: 10.3389/fmicb.2019.02788 31849919 PMC6896226 source
Not checked in the free run.
- Rests on an assumption: Resistance to amphotericin B is rare among Candida species and most fungal pathogens.
- Premisecitation
Interference with the mitochondrial electron transport chain significantly enhances AmB activity.
“Additionally, interference with the mitochondrial electron transport chain, which is involved in fungal respiration, significantly enhances AmB activity [45].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [45] Okamoto Y, Aoki S, Mataga I. Enhancement of amphotericin B activity against Candida albicans by superoxide radical. Mycopathologia. 2004 Jul; 158(1): 9– 15. doi: 10.1023/B:MYCO.0000038430.20669.80 15487314 source
Not checked in the free run.
- Premisecitation
Some Candida auris isolates are pan-drug-resistant, tolerating all available antifungal drugs.
“Recently, some C. auris isolates were classified as pan-drug-resistant, tolerating all available antifungal drugs [12,13].”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [12] O'Brien B, Liang J, Chaturvedi S, et al. Pan-resistant Candida auris: New York subcluster susceptible to antifungal combinations. Lancet Microbe. 2020 Sep; 1(5): e193– e194. doi: 10.1016/S2666-5247(20)30090-2 35544199 source
Not checked in the free run.
- cites [13] Lyman M, Forsberg K, Reuben J, et al. Notes from the field: transmission of Pan-resistant and Echinocandin-resistant Candida auris in health care facilities - Texas and the district of Columbia, January-April 2021. MMWR Morb Mortal Wkly Rep. 2021 Jul 23; 70(29): 1022– 1023. doi: 10.15585/mmwr.mm7029a2 34292928 PMC8297693 source
Not checked in the free run.
- Premisecitation
Increasing the amphotericin B dose to overcome resistance is not feasible because of potential toxicity, particularly renal insufficiency.
“Increasing the AmB dose to overcome resistance is not feasible because of potential toxicity, particularly renal insufficiency [22].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [22] Carolus H, Pierson S, Lagrou K, et al. Amphotericin B and other polyenes-discovery, clinical Use, mode of action and drug resistance. J Fungi (Basel). 2020 Nov 27; 6(4): 1– 21. PMC7724567 33261213
Not checked in the free run.
- Premisecitation
Candida auris has an extraordinary resistance profile to antifungals.
“One of the major phenotypic distinctions between other Candida species and C. auris is its extraordinary resistance profile to antifungals [5–7].”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [5] Rossato L, Colombo AL. Candida auris: what have we learned about its mechanisms of pathogenicity? Front Microbiol. 2018; 9: 3081. doi: 10.3389/fmicb.2018.03081 30631313 PMC6315175 source
Not checked in the free run.
- cites [6] Vila T, Montelongo-Jauregui D, Ahmed H, et al. Comparative evaluations of the pathogenesis of Candida auris phenotypes and Candida albicans using clinically relevant murine models of infections. mSphere. 2020 Aug 5; 5(4): 1– 13. PMC7407074 32759340 source
Not checked in the free run.
- cites [7] Eldesouky HE, Salama EA, Li X, et al. Repurposing approach identifies pitavastatin as a potent azole chemosensitizing agent effective against azole-resistant Candida species. Sci Rep. 2020 May 5; 10(1): 7525. doi: 10.1038/s41598-020-64571-7 32372011 PMC7200796 source
Not checked in the free run.
- Premisecitation
Candida auris infections frequently resist two classes of antifungal drugs, azoles and polyenes.
“C. auris infections frequently resist two classes of antifungal drugs, azoles and polyenes [8,9].”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [8] CDC. Antifungal susceptibility testing and interpretation in Candida auris, https://www.cdc.gov/fungal/candida-auris/c-auris-antifungal.html.
Not checked in the free run.
- cites [9] Eldesouky HE, Lanman NA, Hazbun TR, et al. Aprepitant, an antiemetic agent, interferes with metal ion homeostasis of Candida auris and displays potent synergistic interactions with azole drugs. Virulence. 2020 Dec; 11(1): 1466– 1481. doi: 10.1080/21505594.2020.1838741 33100149 PMC7588212 source
Not checked in the free run.
- Interpretationown data
The AmB/LNP combination has broad-spectrum synergistic interactions against a majority of significant fungal pathogens.
“The results affirm the broad-spectrum synergistic interactions between AmB and LNP against a majority of significant fungal pathogens.”
Quote in the paperSubstantial claim - Premisecitation
A recent study highlighted pan-drug-resistant isolates that do not respond to combination therapy.
“However, a recent study highlighted the alarming problem of pan-drug-resistant isolates that do not respond to combination therapy [55].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [55] Jacobs SE, Jacobs JL, Dennis EK, et al. Candida auris Pan-drug-resistant to four classes of antifungal agents. Antimicrob Agents Chemother. 2022 Jul 19; 66(7): e0005322. doi: 10.1128/aac.00053-22 35770999 PMC9295560 source
Not checked in the free run.
- Interpretationown data
The decreased sensitivity of rho° cells indicates that the respiratory function plays a role in LNP inhibitory activity.
“The decreased sensitivity of the rho° cells indicates that the respiratory function plays a role in LNP inhibitory activity.”
Quote in the paperSubstantial claim - Premisecitation
AmB's secondary mode of action involves causing oxidative cell damage, as evidenced by multiple studies.
“its overlap with the secondary mode of action of AmB, which involves causing oxidative cell damage as evidenced by multiple studies [56].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [56] Mesa-Arango AC, Trevijano-Contador N, Roman E, et al. The production of reactive oxygen species is a universal action mechanism of Amphotericin B against pathogenic yeasts and contributes to the fungicidal effect of this drug. Antimicrob Agents Chemother. 2014 Nov; 58(11): 6627– 6638. doi: 10.1128/AAC.03570-14 25155595 PMC4249417 source
Not checked in the free run.
- Interpretationown data
A cysteine replacing tyrosine at position 279 might facilitate inhibition of cytochrome bc1 by LNP or its metabolite(s).
“suggesting that a cysteine replacing the tyrosine at position 279 might facilitate the inhibition of the cytochrome bc1 by LNP or its metabolite(s).”
Quote in the paperSubstantial claim- Rests on an assumption: The mutated residues are located in the Qo site formed by cytochrome b interacting with the Rieske protein to create the ubiquinol oxidation site within the cytochrome bc1 complex.
- Interpretationown data
Docking studies provide rational support for the association between LNP and its metabolic products and binding to cytochrome bc1.
“Overall, our docking studies provide rational support for the association between LNP and its metabolic products and the binding to cytochrome bc1.”
Quote in the paperSubstantial claim- Rests on an assumption: The mutated residues are located in the Qo site formed by cytochrome b interacting with the Rieske protein to create the ubiquinol oxidation site within the cytochrome bc1 complex.
- Interpretationreasoning
The downregulation of metal ion import and upregulation of SODs suggests a cellular response that attempts to counteract oxidative damage initiated by LNP.
“The downregulation of metal ion import and upregulation of SODs suggests a cellular response that attempts to counteract oxidative damage initiated by LNP.”
Quote in the paperSubstantial claim - Interpretationown data
The in vivo results provide additional confirmation of the therapeutic potential of the AmB/LNP combination in the treatment of C. auris infections.
“The promising in vivo results of AmB/LNP combination provides an additional confirmation of the therapeutic potential of this combination in the treatment of C. auris infections.”
Quote in the paperSubstantial claim - Interpretationown data
Reduced weight loss demonstrates overall improved health of the mice.
“demonstrating the overall improved health of the mice (Figure 6a and 6b).”
Quote in the paperNot a substantial claim - Premisecitation
Most C. auris isolates cannot grow on glycerol or ethanol media as the primary carbon source.
“Due to the inability of most C. auris isolates to grow on glycerol or ethanol media as the primary carbon source [50], we could not evaluate the impact of LNP on the growth of C. auris with both media.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [50] Satoh K, Makimura K, Hasumi Y, et al. Candida auris sp. nov., a novel ascomycetous yeast isolated from the external ear canal of an inpatient in a Japanese hospital. Microbiol Immunol. 2009 Jan; 53(1): 41– 44. doi: 10.1111/j.1348-0421.2008.00083.x 19161556 source
Not checked in the free run.
- Premisecitation
Lansoprazole sulfide has been demonstrated to engage the Qo site in Mycobacterium tuberculosis.
“This site is the same target that a lansoprazole metabolite, lansoprazole sulfide, has been demonstrated to engage in Mycobacterium tuberculosis [44].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [44] Rybniker J, Vocat A, Sala C, et al. Lansoprazole is an antituberculous prodrug targeting cytochrome bc1. Nat Commun. 2015 Jul 9; 6: 7659. doi: 10.1038/ncomms8659 26158909 PMC4510652 source
Not checked in the free run.
- Rests on an assumption: The mutated residues are located in the Qo site formed by cytochrome b interacting with the Rieske protein to create the ubiquinol oxidation site within the cytochrome bc1 complex.
- Interpretationown data
The data provide additional support for the clinical potential of lansoprazole and other related compounds as a promising scaffold in overcoming resistance to amphotericin B in Candida auris.
“our data provides an additional support for the clinical potential of lansoprazole and other related compounds as a promising scaffold in overcoming resistance to amphotericin B in Candida auris.”
Quote in the paperSubstantial claim - Interpretationreasoning
It is unlikely that fungi can easily tolerate inhibition of cytochrome bc1.
“it is unlikely that fungi can easily tolerate its inhibition.”
Quote in the paperSubstantial claim - Premisecitation
Mitochondrial cytochrome bc1 (complex III) inhibition is a major source of intracellular ROS generation.
“Mitochondrial cytochrome bc1 (complex III) inhibition is a major source of intracellular ROS generation [59].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [59] Drose S, Brandt U. The mechanism of mitochondrial superoxide production by the cytochrome bc1 complex. J Biol Chem. 2008 Aug 1; 283(31): 21649– 21654. doi: 10.1074/jbc.M803236200 18522938 source
Not checked in the free run.
- Interpretationown data
The efficacy of the AmB/LNP combination in the murine model emphasizes the therapeutic potential of such combinations.
“The efficacy of the AmB/LNP combination in the murine model emphasizes the therapeutic potential of such combinations.”
Quote in the paperSubstantial claim - Study design and conductnone given
One limitation of the effectiveness of the AmB/LNP combination against C. auris is the elevated doses of LNP required to demonstrate an in vitro and in vivo synergistic relationship with AmB.
“One limitation of the effectiveness of the AmB/LNP combination against C. auris is the elevated doses of LNP required to demonstrate an in vitro and in vivo synergistic relationship with AmB.”
Quote in the paperNot a substantial claim - Interpretationown data
The study identified lansoprazole as having a potent capability to restore and enhance the in vitro and in vivo antifungal activities of amphotericin B.
“our study employed a drug repurposing strategy and identified lansoprazole as having a potent capability to restore and enhance the in vitro and in vivo antifungal activities of amphotericin B.”
Quote in the paperSubstantial claim - Premisecitation
C. auris metabolism is likely to favour respiration because proteomic profiling demonstrated relative enrichment of TCA cycle and decreased glycolysis proteins compared to C. albicans.
“C. auris metabolism is likely to favour respiration because proteomic profiling demonstrated relative enrichment of tricarboxylic acid (TCA) cycle and decreased glycolysis proteins compared to C. albicans [60].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [60] Zamith-Miranda D, Heyman HM, Cleare LG, et al. Multi-omics signature of Candida auris, an emerging and multidrug-resistant pathogen. mSystems. 2019 Jun 11; 4(4): 1– 14. PMC6561322 31186339 source
Not checked in the free run.
- Interpretationreasoning
This work emphasized the role of cytochrome bc1 as a potential antifungal target that enhances AmB's antifungal efficacy against drug-resistant C. auris isolates.
“this work emphasized the role of cytochrome bc1 as a potential antifungal target that enhances AmB's antifungal efficacy against drug-resistant C. auris isolates.”
Quote in the paperSubstantial claim - Interpretationown data
The extensive DNA-damage-driven gene expression changes are consistent with oxidative stress that AmB places on Candida cells at these concentrations.
“which is consistent with oxidative stress that AmB places on Candida cells at these concentrations.”
Quote in the paperSubstantial claim - Interpretationown data
The study demonstrated the in vivo potential of using cytochrome bc1 inhibitors in combination with AmB to treat a drug-resistant fungal infection.
“we demonstrated the in vivo potential of using cytochrome bc1 inhibitors in combination with AmB to treat a drug-resistant fungal infection.”
Quote in the paperSubstantial claim
- Classified as probably not a substantial claim. 30
- May combine two claims. 30
- The quote only partly states this claim. 2
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Findingown dataCytochrome c1 had a high ΔSm value but was excluded as a PISA hit because it also had a high protein abundance value in the LNP-treated sample.
“In addition, cytochrome c1 had a high ΔSm value but was excluded as a PISA hit because it also had a high protein abundance value in the LNP-treated sample.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Findingown dataA total of 2631 proteins were identified between the PISA and global proteomics experiments.
“A total of 2631 proteins were identified between the PISA and global proteomics experiments.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataLNP restored the efficacy of AmB in an immunocompromised mouse model, resulting in a 1.7-log (~98%) CFU reduction in the burden of Candida auris in the kidneys.
“Most importantly, LNP restored the efficacy of AmB in an immunocompromised mouse model, resulting in a 1.7-log (∼98%) CFU reduction in the burden of C. auris in the kidneys.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataCytochrome b peptides were not identified in the proteomic experiments, so the PISA analysis could not assess stabilization by LNP treatment.
“However, cytochrome b peptides were not identified in the proteomic experiments, so the PISA analysis could not assess stabilization by LNP treatment.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataIn both LNP and lansoprazole sulfide, the imidazole ring forms a T-shape stacking with Y279 and the pyridine ring forms pi-pi and halogen-pi interactions with F296.
“Similar in both compounds, the imidazole ring forms a T-shape stacking with the side chain of Y279 (Figure 5a) and the pyridine ring forms pi-pi and halogen-pi interactions with F296.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Findingown dataSimilar results were observed for C. albicans SC5314 strain growth in the presence of glucose versus glycerol as a carbon source.
“Similar results were observed for the C. albicans SC5314 strain growth in the presence of glucose versus glycerol as a carbon source (Fig. S1).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataLNP exhibited a synergistic relationship with AmB against 90% of the tested isolates and restored the fungicidal capability of AmB within 6 hr.
“LNP exhibited a synergistic relationship with AmB against 90% of the tested isolates and restored the fungicidal capability of AmB within 6 hr.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe parent strain and F129L were fully inhibited by atovaquone, while L275F, F278A and Y279C were resistant.
“The parent strain and F129L were fully inhibited by atovaquone, while L275F, F278A and Y279C were resistant.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataBoth LNP and lansoprazole sulfide adopt similar extended poses mainly stabilized by hydrophobic contacts in the pocket.
“Both LNP and Lansoprazole sulfide adopt similar extended poses, mainly stabilized by hydrophobic contacts in the pocket.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThe AmB/LNP combination led to a 77% increase in ROS levels, significantly higher than fungal cells treated with either LNP or AmB alone.
“As expected, the AmB/LNP combination led to a 77% increase in ROS levels, significantly higher than fungal cells treated with either LNP or AmB alone (Figure 3b).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataBoth Δsod1 and Δsod2 Saccharomyces cerevisiae mutants showed high sensitivity to LNP with reduced growth by 90% and 89%, respectively, compared to the parent strain AD1-9.
“Both mutants showed high sensitivity to LNP with reduced growth by 90% and 89%, respectively, as compared to the parent strain AD1-9 (Figure 3c).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataAt 48 hr, the rho+ Saccharomyces cerevisiae (in YPD and YPEtOH) was inhibited by ~95%, while the rho° was inhibited by 40%.
“At 48 hr, the rho+ (in YPD and YPEtOH) was inhibited by ∼95%, while the rho° was inhibited by 40% (Figure 4a and 4b).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataTwo out of the three upregulated genes in the LNP-treated group were superoxide dismutase homologues (SOD1 and SOD4) and the third was the multidrug transporter CDR1.
“Two out of the three upregulated genes were found to be superoxide dismutase homologues (SOD1 and SOD4) and the third gene was the multidrug transporter, CDR1.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataLNP at 300 mg/kg significantly enhanced the activity of AmB at 0.5 mg/kg in a murine model, reducing kidney fungal burden by 1.7-log (98%) compared to untreated mice and by one log (90%) compared to the AmB-treated group.
“LNP (300 mg/kg) significantly enhanced the activity of AmB (0.5 mg/kg) as the AmB/LNP combination reduced the fungal burden in the kidneys by 1.7-log (98%) reduction compared to untreated mice and by one log (90%) reduction compared to the AmB-treated group.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe docking score to bovine bc1 with UHDBT is −8.2 kcal/mol, which is 2.6 kcal/mol higher than that of the C. albicans cytochrome bc1 structure.
“the docking score to the bovine bc1 with UHDBT (PDB ID: 1SQV) structure is –8.2 kcal/mol, which is 2.6 kcal/mol higher than that of the C. albicans cytochrome bc1 structure (Figure 5b).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataLNP shows a slightly more favourable docking pose to C. albicans cytochrome bc1 with a Glide XP score of −10.8 kcal/mol, while lansoprazole sulfide has a score of −10.4.
“LNP shows a slightly more favourable pose with a Glide XP score of −10.8 kcal/mol (Figure 5a) while this score is −10.4 for Lansoprazole sulfide.”
Quote in the paperNot a substantial claimMay combine two claims.
FindingreasoningRotenone can improve the activity of AmB but also can block further synergy between AmB and either LNP or antimycin A.
“We confirmed that rotenone can improve the activity of AmB but also can block further synergy between AmB with either LNP or antimycin A.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe up- and downregulated genes after treatment with AmB or AmB/LNP were extensive and driven by DNA damage.
“The up and downregulated genes after treatment with either AmB (0.5 µg/mL) or AmB/LNP (0.5/30 µg/mL) were extensive and driven by DNA damage”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataMolecular docking analysis showed that LNP and four metabolites could possibly bind to the Qo site of cytochrome bc1 and that small changes in drug structure could alter binding to the target.
“Molecular docking analysis showed that LNP and four metabolites could possibly bind to Qo site of cytochrome bc1 and that small changes in the drug structure could alter its binding to the target.”
Quote in the paperSubstantial claim- Rests on an assumption: The mutated residues are located in the Qo site formed by cytochrome b interacting with the Rieske protein to create the ubiquinol oxidation site within the cytochrome bc1 complex.
May combine two claims.
Findingown dataLNP generates ROS in C. auris, and ROS production considerably increased when LNP was combined with AmB.
“Here, we showed that LNP generates ROS in C. auris and how the production of ROS considerably increased when LNP was combined with AmB.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe AmB/LNP combination was well tolerated, with no signs of toxicity observed in any of the treated mice.
“the AmB/LNP combination was well tolerated, with no signs of toxicity observed in any of the treated mice”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationA minor but growing resistance (1-7%) has been reported towards echinocandins in Candida auris.
“However, a minor but alarmingly growing resistance (1-7%) has been reported towards the third class (echinocandins) [10,11].”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [10] Lockhart SR, Etienne KA, Vallabhaneni S, et al. Simultaneous emergence of multidrug-resistant Candida auris on 3 continents confirmed by whole-genome sequencing and epidemiological analyses. Clin Infect Dis. 2017 Jan 15; 64(2): 134– 140. doi: 10.1093/cid/ciw691 27988485 PMC5215215 source
Not checked in the free run.
- cites [11] Chowdhary A, Prakash A, Sharma C, et al. A multicentre study of antifungal susceptibility patterns among 350 Candida auris isolates (2009–17) in India: role of the ERG11 and FKS1 genes in azole and echinocandin resistance. J Antimicrob Chemoth. 2018 Apr; 73(4): 891– 899. doi: 10.1093/jac/dkx480 29325167 source
Not checked in the free run.
May combine two claims.
InterpretationreasoningAmB/LNP therapy potentially interferes with fungal respiration, leading to increased oxidative pressure.
“The AmB/LNP therapy was recognized as potentially interfering with fungal respiration, leading to increased oxidative pressure.”
Quote in the paperSubstantial claimClassified as probably not a substantial claim.
PremisecitationCombination therapy has proven to be an effective approach in overcoming antifungal drug resistance.
“Combination therapy has proven to be an effective approach in overcoming antifungal drug resistance, significantly contributing to preserving the existing arsenal of antimicrobial agents, reducing treatment duration, and mitigating drug toxicity [18].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [18] Hill JA, Cowen LE. Using combination therapy to thwart drug resistance. Future Microbiol. 2015; 10(11): 1719– 1726. doi: 10.2217/fmb.15.68 26597425 source
Not checked in the free run.
Classified as probably not a substantial claim.
PremisecitationMitochondrial complex III (cytochrome bc1) was previously identified as a target of LNP in Mycobacterium tuberculosis.
“Among these potential targets, we focused on mitochondrial complex III, also referred to as cytochrome bc1, because the complex was previously identified as a target of LNP in Mycobacterium tuberculosis [44].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [44] Rybniker J, Vocat A, Sala C, et al. Lansoprazole is an antituberculous prodrug targeting cytochrome bc1. Nat Commun. 2015 Jul 9; 6: 7659. doi: 10.1038/ncomms8659 26158909 PMC4510652 source
Not checked in the free run.
Classified as probably not a substantial claim.
PremisecitationCombination therapy is an alternative approach to overcoming growing microbial infection resistance.
“Combination therapy is an alternative approach to overcoming the growing microbial infection resistance [23,24].”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [23] Shekhar-Guturja T, Gunaherath GM, Wijeratne EM, et al. Dual action antifungal small molecule modulates multidrug efflux and TOR signaling. Nat Chem Biol. 2016 Oct; 12(10): 867– 875. doi: 10.1038/nchembio.2165 27571477 PMC5030160 source
Not checked in the free run.
- cites [24] Eldesouky HE, Mayhoub A, Hazbun TR, et al. Reversal of azole resistance in Candida albicans by Sulfa antibacterial drugs. Antimicrob Agents Chemother. 2018 Mar; 62(3). doi: 10.1128/AAC.00701-17 PMC5826110 29263071 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing), S4 (based). The quote only partly states this claim.
Study design and conductown dataRNA-Seq analysis was performed in triplicates.
“Exponential C. auris AR0390 in RPMI 1640 medium were treated with DMSO (control), AmB (0.5 µg/mL), LNP (30 µg/mL), or the combination of AmB/LNP in triplicates for 3 hr at 35 °C.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenThe statistical analysis was carried out using a one-way ANOVA of Dunnett's test for multiple comparisons using GraphPad Prism 8.
“The number of biological replicates is noted in each experiment, and the statistical analysis was carried out using a one-way ANOVA of Dunnett’s test for multiple comparisons using GraphPad Prism 8 (GraphPad Software, La Jolla, CA) unless otherwise noted.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Study design and conductnone givenThe experiments were repeated at least twice, and the data was averaged.
“The experiments were repeated at least twice, and the data was averaged.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationMetal ion homeostasis is crucial in minimizing ROS formation.
“Consistent with the notion of LNP-mediated oxidative damage, the SODs are antioxidant enzymes that detoxify ROS [48], and metal ion homeostasis is crucial in minimizing ROS formation [49].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [49] Temple MD, Perrone GG, Dawes IW. Complex cellular responses to reactive oxygen species. Trends Cell Biol. 2005 Jun; 15(6): 319– 326. doi: 10.1016/j.tcb.2005.04.003 15953550 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
InterpretationreasoningThe effect of LNP started to fade after 72 hr potentially due to the instability of LNP in the culture media.
“The effect started to fade after 72 hr potentially due to the instability of LNP in the culture media.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationThe S. cerevisiae cytochrome b mutants F129L, L275F, F278A and Y279C were previously generated using mitochondrial transformation.
“These mutants were previously generated using the mitochondrial transformation technique [51].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [51] Hill P, Kessl J, Fisher N, et al. Recapitulation in Saccharomyces cerevisiae of cytochrome b mutations conferring resistance to atovaquone in pneumocystis jiroveci. Antimicrob Agents Chemother. 2003 Sep; 47(9): 2725– 2731. doi: 10.1128/AAC.47.9.2725-2731.2003 12936966 PMC182622 source
Not checked in the free run.
Classified as probably not a substantial claim. May combine two claims.
Study design and conductcitationMicrodilution checkerboard assays were utilized, and the ΣFICI was calculated and interpreted as previously described.
“To evaluate the in vitro effectiveness of the AmB/LNP combination against a variety of Candida species, microdilution checkerboard assays were utilized, and the ΣFICI was calculated and interpreted as previously described [26,27].”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [26] Gu W, Guo D, Zhang L, et al. The synergistic effect of azoles and fluoxetine against resistant Candida albicans strains is attributed to attenuating fungal virulence. Antimicrob Agents Chemother. 2016 Oct; 60(10): 6179– 6188. doi: 10.1128/AAC.03046-15 27503639 PMC5038273 source
Not checked in the free run.
- cites [27] Eldesouky HE, Salama EA, Hazbun TR, et al. Ospemifene displays broad-spectrum synergistic interactions with itraconazole through potent interference with fungal efflux activities. Sci Rep. 2020 Apr 8; 10(1): 6089. doi: 10.1038/s41598-020-62976-y 32269301 PMC7142066 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationSuperoxide dismutases (SODs) are antioxidant enzymes that detoxify reactive oxygen species (ROS).
“Consistent with the notion of LNP-mediated oxidative damage, the SODs are antioxidant enzymes that detoxify ROS [48], and metal ion homeostasis is crucial in minimizing ROS formation [49].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [48] Dantas Ada S, Day A, Ikeh M, et al. Oxidative stress responses in the human fungal pathogen, Candida albicans. Biomolecules. 2015 Feb 25; 5(1): 142– 165. doi: 10.3390/biom5010142 25723552 PMC4384116 source
Not checked in the free run.
Classified as probably not a substantial claim.
Study design and conductcitationThe MICs of AmB and LNP against yeast isolates were identified using the CLSI M27-A3 guidelines.
“The MICs of AmB and LNP against yeast isolates were identified using the CLSI M27-A3 guidelines [25].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [25] CLSI. Reference method for broth dilution antifungal susceptibility testing of yeasts. In: 4th ed. CLSI standard M27. Wayne, PA: Clinical and Laboratory Standards Institute; 2017.
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenThe Benjamini-Hochberg method was used to adjust the P-values for multiple testing.
“The Benjamini-Hochberg method was used to adjust the P-values for multiple testing.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductown dataThe PISA assay was performed with biological triplicates.
“We performed the PISA assay with biological triplicates to identify LNP’s target in C. auris, as previously described [30].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [30] Gaetani M, Sabatier P, Saei AA, et al. Proteome integral solubility alteration: A high-throughput proteomics assay for target deconvolution. J Proteome Res. 2019 Nov 1; 18(11): 4027– 4037. doi: 10.1021/acs.jproteome.9b00500 31545609 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Study design and conductnone givenThe measurements were repeated twice, and the data was averaged.
“The measurements were repeated twice, and the data was averaged.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationAnother cytochrome bc1 inhibitor, Inz-5, alters the configuration of the Rieske head domain in mitochondrial cytochrome bc1, demonstrating the targetability of that complex.
“a recent study showed that another cytochrome bc1 inhibitor (Inz-5) alters the configuration of the Rieske head domain in mitochondrial cytochrome bc1, demonstrating the targetability of that complex [57].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [57] Di Trani JM, Liu Z, Whitesell L, et al. Rieske head domain dynamics and indazole-derivative inhibition of Candida albicans complex III. Structure. 2022 Jan 6; 30(1): 129– 138 e4. doi: 10.1016/j.str.2021.08.006 34525326 source
Not checked in the free run.
The quote only partly states this claim.
Interpretationown dataThe additional hydrogen bond may explain the different docking scores between LNP and lansoprazole sulfide.
“which may explain the different docking scores.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationAntifungal combination therapy has potential to treat multidrug- and pandrug-resistant C. auris, as previously reported.
“The potential of antifungal combination therapy to treat multidrug- and pandrug-resistant C. auris has been previously reported [12].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [12] O'Brien B, Liang J, Chaturvedi S, et al. Pan-resistant Candida auris: New York subcluster susceptible to antifungal combinations. Lancet Microbe. 2020 Sep; 1(5): e193– e194. doi: 10.1016/S2666-5247(20)30090-2 35544199 source
Not checked in the free run.
May combine two claims.
InterpretationreasoningIn the presence of a high concentration of rotenone, the electron transport chain is disrupted at complex I, which prevents cytochrome bc1 inhibitors such as antimycin A from generating more ROS.
“The combination of inhibitors strongly supports that in the presence of a high concentration of rotenone, the electron transport chain is disrupted at an earlier step (complex I), which prevents cytochrome bc1 inhibitors, such as antimycin A, from generating more ROS.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationEarlier studies pointed to a correlation between withstanding oxidative stress and AmB resistance in other fungal species.
“earlier studies pointed to a correlation between withstanding oxidative stress and AmB resistance in other fungal species [58].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [58] Sokol-Anderson M, Sligh JE Jr., Elberg S, et al. Role of cell defense against oxidative damage in the resistance of Candida albicans to the killing effect of amphotericin B. Antimicrob Agents Chemother. 1988 May; 32(5): 702– 705. doi: 10.1128/AAC.32.5.702 3293525 PMC172255 source
Not checked in the free run.
Classified as probably not a substantial claim.
PremisecitationCytochrome bc1 is a crucial component of cellular respiration.
“The cytochrome bc1 is a crucial component of cellular respiration [61]”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [61] Musso L, Fabbrini A, Dallavalle S. Natural compound-derived cytochrome bc1 complex inhibitors as antifungal agents. Molecules. 2020 Oct 7; 25(19): 1– 28. PMC7583968 33036496 source
Not checked in the free run.
May combine two claims.
PremisecitationOther FDA-approved medications, like atovaquone, target plasmodial cytochrome bc1 safely, which validates cytochrome bc1 as a suitable drug target.
“other FDA-approved medications, like atovaquone, target plasmodial cytochrome bc1 safely, which validates cytochrome bc1 as a suitable drug target [64].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [64] Simm C, Luan CH, Weiss E, et al. High-throughput screen for identifying small molecules that target fungal zinc homeostasis. PLoS One. 2011; 6(9): e25136. doi: 10.1371/journal.pone.0025136 21980385 PMC3182986 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationCytochrome bc1 was identified as a target for a LNP metabolite in M. tuberculosis.
“Cytochrome bc1 was also identified as a target for a LNP metabolite in M. tuberculosis, which further supported the hypothesis that cytochrome bc1 is a potential target in C. auris [44].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [44] Rybniker J, Vocat A, Sala C, et al. Lansoprazole is an antituberculous prodrug targeting cytochrome bc1. Nat Commun. 2015 Jul 9; 6: 7659. doi: 10.1038/ncomms8659 26158909 PMC4510652 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
InterpretationreasoningLNP might target fungal cytochrome bc1 through other metabolites, possibly aided by AmB treatment.
“LNP might target the fungal cytochrome bc1 through other metabolites (which may be aided by the AmB treatment).”
Quote in the paperNot a substantial claim- Rests on an assumption: LNP is an unstable compound that yields several metabolites.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationThe role of oxidative damage as a secondary mode of action for AmB has been highlighted in several reports.
“The role of oxidative damage as a secondary mode of action for AmB has been highlighted in several reports [56].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [56] Mesa-Arango AC, Trevijano-Contador N, Roman E, et al. The production of reactive oxygen species is a universal action mechanism of Amphotericin B against pathogenic yeasts and contributes to the fungicidal effect of this drug. Antimicrob Agents Chemother. 2014 Nov; 58(11): 6627– 6638. doi: 10.1128/AAC.03570-14 25155595 PMC4249417 source
Not checked in the free run.
Classified as probably not a substantial claim.
InterpretationreasoningThe evidence leads to the central hypothesis that fungal cytochrome bc1 is the potential target by which LNP works synergistically with AmB.
“the evidence leads us to our central hypothesis that the fungal cytochrome bc1 is the potential target by which LNP works synergistically with AmB (Figure 7).”
Quote in the paperSubstantial claimMay combine two claims.
InterpretationreasoningThis research highlights the importance of cytochrome bc1 as a potential antifungal target, emphasizing its role in augmenting the antifungal effectiveness of amphotericin B particularly against drug-resistant C. auris.
“This research highlights the importance of cytochrome bc1 as a potential antifungal target, emphasizing its role in augmenting the antifungal effectiveness of amphotericin B particularly against drug-resistant C. auris.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationSome inhibitors of cytochrome bc1 were deemed to be toxic to human cells.
“some inhibitors to cytochrome bc1 were deemed to be toxic to human cells [63].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [63] Guidarelli A, Brambilla L, Rota C, et al. The respiratory-chain poison antimycin A promotes the formation of DNA single-strand breaks and reduces toxicity in U937 cells exposed to t-butylhydroperoxide. Biochem J. 1996 Jul 15; 317(Pt 2): 371– 375. doi: 10.1042/bj3170371 8713060 PMC1217497 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationPrevious studies reported that targeting fungal cytochrome bc1 disrupts the ability of C. albicans to tolerate antifungal drugs, sensitizes C. albicans to macrophages, and impairs the virulence of C. albicans in mice.
“previous studies reported that targeting fungal cytochrome bc1 disrupts the ability of C. albicans to tolerate exposure to antifungal drugs, sensitizes C. albicans to macrophages, and, most importantly, impairs the virulence of C. albicans in mice [62].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [62] Vincent BM, Langlois JB, Srinivas R, et al. A fungal-selective cytochrome bc(1) inhibitor impairs virulence and prevents the evolution of drug resistance. Cell Chem Biol. 2016 Aug 18; 23(8): 978– 991. doi: 10.1016/j.chembiol.2016.06.016 27524297 PMC5159300 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationPrevious research highlighted the importance of cytochrome bc1 as a potential antifungal drug target.
“Previous research highlighted the importance of cytochrome bc1 as a potential antifungal drug target [61,62].”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [61] Musso L, Fabbrini A, Dallavalle S. Natural compound-derived cytochrome bc1 complex inhibitors as antifungal agents. Molecules. 2020 Oct 7; 25(19): 1– 28. PMC7583968 33036496 source
Not checked in the free run.
- cites [62] Vincent BM, Langlois JB, Srinivas R, et al. A fungal-selective cytochrome bc(1) inhibitor impairs virulence and prevents the evolution of drug resistance. Cell Chem Biol. 2016 Aug 18; 23(8): 978– 991. doi: 10.1016/j.chembiol.2016.06.016 27524297 PMC5159300 source
Not checked in the free run.
The paper relies on this without support.
Resistance to amphotericin B is rare among Candida species and most fungal pathogens.
“Resistance to AmB is rare among Candida species and most fungal pathogens.”
The paper relies on this without support.
Lansoprazole has a favourable safety and pharmacokinetic profile.
“Among all identified hits, LNP was selected for further investigation in this study due to its favourable safety and pharmacokinetic profile.”
The paper relies on this without support.
The mutated residues are located in the Qo site formed by cytochrome b interacting with the Rieske protein to create the ubiquinol oxidation site within the cytochrome bc1 complex.
“The mutated residues are located in the so-called Qo site formed by cytochrome b interacting with the Rieske protein to create the ubiquinol oxidation site within the cytochrome bc1 complex.”
The paper relies on this without support.
LNP is an unstable compound that yields several metabolites.
“LNP is an unstable compound, yielding several metabolites”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Lansoprazole can synergize with amphotericin B by inhibiting cytochrome bc1 in C. auris, consistent with our data for AR387 and R1 yielding fractional inhibitory concentration index values of 0.625 and 0.75, respectively.
“Lansoprazole can synergize with AMB by inhibiting cytochrome bc1 in C. auris35, which is consistent with our data for AR387 and R1, yielding fractional inhibitory concentration index (FICI) values of 0.625 and 0.75, respectively.”
From Candida auris skin tropism and antifungal resistance are mediated by carbonic anhydrase Nce103 (2025) · cites this paper as [35]
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<i>Candida auris</i> : multi-omics signature of an emerging and multidrug-resistant pathogen
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“Also, previous studies reported that targeting fungal cytochrome bc 1 disrupts the ability of C. albicans to tolerate exposure to antifungal drugs, sensitizes C. albicans to macrophages, and, most importantly, impairs the virulence of C. albicans in mice [62].”
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Self-citationReversal of Azole Resistance in Candida albicans by Sulfa Antibacterial Drugs
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“One of the major phenotypic distinctions between other Candida species and C. auris is its extraordinary resistance pro fi le to antifungals [5 – 7].”
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Self-citationEnhancement of Amphotericin B Activity Against Candida albicans by Superoxide Radical
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High-Throughput Profiling of Candida auris Isolates Reveals Clade-Specific Metabolic Differences
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Self-citationCandida auris: The Canary in the Mine of Antifungal Drug Resistance
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Atazanavir Resensitizes Candida auris to Azoles
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Self-citation
Flagged first, then by citations
Research works printed but not linked: 1
- CLSI. Reference method for broth dilution antifungal susceptibility testing of yeasts. In: 4th ed. CLSI standard M27. Wayne, PA: Clinical and Laboratory Standards Institute; 2017.
Cited by
Sorted by citations
Candida auris skin tropism and antifungal resistance are mediated by carbonic anhydrase Nce103
Phan-Canh, T., Coman, C., Lackner, M., Troppmair, N., Müller, C., Cerbu, D., Seiser, S., Penninger, P., Tsymala, I., Khunweeraphong, N., et al. (2025) · Nature Microbiology · doi:10.1038/s41564-025-02189-z · Cited by 16 · see citing works
“Lansoprazole can synergize with AMB by inhibiting cytochrome bc1 in C. auris 35 , which is consistent with our data for AR387 and R1, yielding fractional inhibitory concentration index (FICI) values of 0.625 and 0.75, respectively.”
InfluentialIonescu, S. G., Luchian, I. A., Dămian, C., Goriuc, A., Porumb‐Andrese, E., Popa, C. G., Cobzaru, R. G., Ripa, C. V., & Ursu, R. G. (2024) · Current Issues in Molecular Biology · doi:10.3390/cimb46060362 · Cited by 13 · see citing works
Overcoming amphotericin B resistance in Candida auris using the antiemetic drug rolapitant
Salama, E. A., Elgammal, Y., Utturkar, S. M., Lanman, N. A., Hazbun, T. R., & Seleem, M. N. (2024) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.00556-24 · Cited by 11 · see citing works
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HIV protease inhibitors restore amphotericin B activity against Candida
Elgammal, Y., Salama, E. A., & Seleem, M. N. (2025) · PLoS ONE · doi:10.1371/journal.pone.0324080 · Cited by 5 · see citing works
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Self-citationSIP‐SRS Imaging of Cell Wall Synthesis Identifies a Synergy between Micafungin and Amphotericin B
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Repurposing antiviral agents against mucormycosis
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Candida auris can acquire antifungal resistance without selection pressurePreprint
Phan-Canh, T., Nguyen-Le, D.-M., Chauhan, M., Luu, P., Chowdhary, A., Chauhan, N., & Kuchler, K. (2026) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2026.01.07.695227 · Cited by 1 · see citing works
Salama, E. A., Elgammal, Y., Wijeratne, A. B., Lanman, N. A., Utturkar, S. M., Farhangian, A., Li, J., Meunier, B., Hazbun, T. R., & Seleem, M. N. (2024) · Emerging Microbes & Infections · doi:10.1080/22221751.2024.2396869
Self-citationMechanisms of Resistance to Antiparasitic Agents
Agwu, E. (2026) · Springer eBooks · doi:10.1007/978-3-032-17110-8_6
Meyer, K. J., Chow, V., Piliouras, E., Lee, Y., Ostapska, H., Valencia, O. O., Makhlouf, I. B., Robbins, N., Cowen, L. E., & Nodwell, J. R. (2026) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2026.10.25.761712
- Authors
- Salama, E. A., Elgammal, Y., Wijeratne, A., Lanman, N. A., Utturkar, S. M., Farhangian, A., Li, J., Meunier, B., Hazbun, T. R., & Seleem, M. N.
- Affiliations
- Virginia–Maryland College of Veterinary Medicine (US)
- Indiana University Indianapolis (US)
- Purdue University West Lafayette (US)
- Centre National de la Recherche Scientifique (FR)
- Corresponding author
- Hazbun, Tony R.
- Seleem, Mohamed N.
- ORCID
- Venue
- Emerging Microbes & Infections
- Publisher
- Informa UK Limited
- Published
- 2024-03-03
- Volume
- 13
- Issue
- 1
- Pages
- 2322649-2322649
- ISSN
- 2222-1751 (ISSN-L)
- PMC
- PMC10911247
- OpenAlex
- W4392344298
- Semantic Scholar
- 56f5c84cd3675269c0a1ddd9df08010b4db032db
- Cited by
- 16
- References
- 61
- Citations by year
- 2026: 4 · 2025: 6 · 2024: 6
- FWCI
- 5.53
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- Emerging Microbes & Infections (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- IUScholarWorks (Indiana University) (submittedVersion, cc-by)
- HAL (submittedVersion, cc-by-nc)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion)
- Funders
- National Institutes of Health (P30 CA023168)
- Topics
- Health Sciences › Medicine › Infectious Diseases › Antifungal resistance and susceptibility
- Life Sciences › Agricultural and Biological Sciences › Ecology, Evolution, Behavior and Systematics › Fungal Plant Pathogen Control
- Health Sciences › Medicine › Epidemiology › Fungal Infections and Studies
- Keywords
- lansoprazole, amphotericin B, Candida auris, multidrug resistance, antifungal synergy, proton pump inhibitors, cytochrome bc1 complex, mitochondrial respiratory chain, oxidative stress, drug repurposing, Cryptococcus, immunocompromised mouse model
- MeSH terms
- Candida auris, Amphotericin B, Animals, Antifungal Agents, Candidiasis, Cytochromes, Respiration, Mice, Lansoprazole
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Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
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