Fermented Foods, Health and the Gut Microbiome
Open accessAbstract
Fermented foods have been a part of human diet for almost 10,000 years, and their level of diversity in the 21st century is substantial. The health benefits of fermented foods have been intensively investigated; identification of bioactive peptides and microbial metabolites in fermented foods that can positively affect human health has consolidated this interest. Each fermented food typically hosts a distinct population of microorganisms. Once ingested, nutrients and microorganisms from fermented foods may survive to interact with the gut microbiome, which can now be resolved at the species and strain level by metagenomics. Transient or long-term colonization of the gut by fermented food strains or impacts of fermented foods on indigenous gut microbes can therefore be determined. This review considers the primary food fermentation pathways and microorganisms involved, the potential health benefits, and the ability of these foodstuffs to impact the gut microbiome once ingested either through compounds produced during the fermentation process or through interactions with microorganisms from the fermented food that are capable of surviving in the gastro-intestinal transit. This review clearly shows that fermented foods can affect the gut microbiome in both the short and long term, and should be considered an important element of the human diet.
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“While we investigated possible transmission events (Figures 6, 7, S6, and S7), the timing cannot currently be estimated with precision and is hindered by concurrent person-to-person transmission.”
Self-citationProbiotic Functions in Fermented Foods: Anti-Viral, Immunomodulatory, and Anti-Cancer Benefits
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- Authors
- Leeuwendaal, N. K., Stanton, C., O’Toole, P. W., & Beresford, T. P.
- Affiliations
- Teagasc - The Irish Agriculture and Food Development Authority (IE)
- University College Cork (IE)
- Corresponding author
- Beresford, Tom P.
- Venue
- Nutrients
- Publisher
- MDPI AG
- Published
- 2022-04-06
- Volume
- 14
- Issue
- 7
- Pages
- 1527
- ISSN
- 2072-6643 (ISSN-L)
- PMC
- PMC9003261
- OpenAlex
- W4223558168
- Cited by
- 496
- References
- 185
- Citations by year
- 2026: 140 · 2025: 190 · 2024: 101 · 2023: 48 · 2022: 16
- FWCI
- 8.11
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- Nutrients (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Funders
- Teagasc - The Irish Agriculture and Food Development Authority (6555)
- Topics
- Life Sciences › Agricultural and Biological Sciences › Food Science › Probiotics and Fermented Foods
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Life Sciences › Agricultural and Biological Sciences › Food Science › Fermentation and Sensory Analysis
- Keywords
- fermented foods, gut microbiota, health benefits, bioactive peptides, microbial metabolites, microbial colonization, metagenomics, gastrointestinal transit
- MeSH terms
- Gastrointestinal Microbiome, Fermented Foods, Diet, Fermentation, Humans
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
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