MicroRNA-124 promotes microglia quiescence and suppresses EAE by deactivating macrophages via the C/EBP-α–PU.1 pathway
Open accessAbstract
MicroRNAs are a family of regulatory molecules involved in many physiological processes, including differentiation and activation of cells of the immune system. We found that brain-specific miR-124 is expressed in microglia but not in peripheral monocytes or macrophages. When overexpressed in macrophages, miR-124 directly inhibited the transcription factor CCAAT/enhancer-binding protein-α (C/EBP-α) and its downstream target PU.1, resulting in transformation of these cells from an activated phenotype into a quiescent CD45(low), major histocompatibility complex (MHC) class II(low) phenotype resembling resting microglia. During experimental autoimmune encephalomyelitis (EAE), miR-124 was downregulated in activated microglia. Peripheral administration of miR-124 in EAE caused systemic deactivation of macrophages, reduced activation of myelin-specific T cells and marked suppression of disease. Conversely, knockdown of miR-124 in microglia and macrophages resulted in activation of these cells in vitro and in vivo. These findings identify miR-124 both as a key regulator of microglia quiescence in the central nervous system and as a previously unknown modulator of monocyte and macrophage activation.
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- Findingown data
Most peripheral macrophages that infiltrate the CNS during EAE onset and at the peak of disease show an activated CD45hi MHC class II+ phenotype.
“Most of the peripheral macrophages that infiltrated the CNS during EAE onset and at the peak of disease also showed an activated CD45hiMHC class II+ phenotype (Fig. 2a).”
Quote in the paperNot a substantial claim - Findingown data
In microglia, miR-124 expression decreases by approximately 70% during the course of EAE compared to healthy chimeras.
“In microglia, miR-124 expression decreased by ~70% during the course of the disease, compared to healthy chimeras (Fig. 1d).”
Quote in the paperSubstantial claim - Findingown data
Peripheral administration of miR-124 in EAE causes systemic deactivation of macrophages.
“Peripheral administration of miR-124 in EAE caused systemic deactivation of macrophages”
- Also stated in: § miR-124 inhibits EAE and reduces CNS inflammation · plain
“Subsequent experiments showed that peripheral administration of miR-124 during EAE directly affected macrophages and deactivated them”
Quote in the paperSubstantial claim - Also stated in: § miR-124 inhibits EAE and reduces CNS inflammation · plain
- Findingown data
Conditional knockout of Cebpa ameliorates EAE.
“Finally, we found that conditional knockout of the Cebpa gene also ameliorated EAE (Supplementary Data and Supplementary Fig. 9b).”
Quote in the paperSubstantial claim - Findingown data
During EAE, miR-124 is downregulated in activated microglia.
“During experimental autoimmune encephalomyelitis (EAE), miR-124 was downregulated in activated microglia.”
- Also stated in: § miR-124 is highly expressed by CNS-resident microglia · plain
“In microglia, miR-124 expression decreased by ~70% during the course of the disease, compared to healthy chimeras (Fig. 1d).”
Quote in the paperSubstantial claim - Also stated in: § miR-124 is highly expressed by CNS-resident microglia · plain
- Findingown data
Peripheral macrophages begin to express low levels of miR-124 during onset and in the recovery phase of EAE.
“Peripheral macrophages, however, began to express low levels of miR-124 during onset and in the recovery phase (Fig. 1d, days 14 and 40).”
Quote in the paperNot a substantial claim - Findingown data
According to target-prediction analysis in silico, miR-124 does not directly regulate PU.1 mRNA or mRNAs for activation markers CD45, CD11b, F4/80, MHC class II and CD86.
“According to the target-prediction analysis in silico, miR-124 does not directly regulate either PU.1 mRNA or mRNAs for activation markers CD45, CD11b, F4/80, MHC class II and CD86.”
Quote in the paperSubstantial claim - Findingown data
Transfection of macrophages with anti-miR-124 attenuates the downregulation of MHC class II and CD45 in coculture.
“Using the coculture system, we found that transfection of macrophages with anti–miR-124 attenuated the downregulation of MHC class II and CD45 (Fig. 6c–e).”
Quote in the paperSubstantial claim - Findingown data
Among 31 miRNAs known to be expressed in immune cells and the CNS, only resident macrophages from brain and spinal cord (microglia) expressed miR-124.
“This analysis revealed that only resident macrophages from brain and spinal cord (microglia) expressed miR-124 (Fig. 1a)”
Quote in the paperSubstantial claim - Findingown data
Coculturing GFP+ BMDMs with an astroglial or neuronal cell line causes macrophages to acquire a deactivated microglia-like phenotype, indicated by downregulation of CD45 and MHC class II and upregulation of miR-124.
“In these cocultures, the macrophages acquired a deactivated microglia-like phenotype, as indicated by downregulation of both CD45 and MHC class II (Fig. 6a) and upregulation of miR-124 (Fig. 6b).”
Quote in the paperSubstantial claim - Findingown data
miR-124 inhibits expression of TNF-α in macrophages.
“We also found that miR-124 inhibited expression of TNF-α in macrophages.”
Quote in the paperNot a substantial claim - Findingown data
Microglia cultured with GM-CSF and IFN-γ or with LPS and IFN-γ downregulate miR-124 compared to ex vivo-isolated cells or cells cultured in media alone.
“Microglia cultured with GM-CSF and IFN-γ or with LPS and IFN-γ downregulated miR-124 compared to ex vivo–isolated cells or cells cultured in media alone (Fig. 2c).”
Quote in the paperSubstantial claim - Findingcitation
Peripheral macrophages in the CNS of healthy mice show an activated CD45hi MHC class IIhi phenotype.
“Peripheral macrophages in the CNS of healthy mice showed an activated CD45hiMHC class IIhi phenotype, which was consistent with previous studies25.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [25] Hickey, W.F. & Kimura, H. Perivascular microglial cells of the CNS are bone marrow-derived and present antigen in vivo. Science 239, 290–292 (1988). source
- Findingown data
Overexpression of miR-124 in macrophages directly inhibits C/EBP-α.
“When overexpressed in macrophages, miR-124 directly inhibited the transcription factor CCAAT/enhancer-binding protein-α (C/EBP-α)”
- Also stated in: § miR-124 downregulates C/EBP-α and PU.1 · boosted
“These data confirm that miR-124 directly targets the mRNA encoding C/EBP-α and reduces expression of this protein.”
Quote in the paperSubstantial claim - Also stated in: § miR-124 downregulates C/EBP-α and PU.1 · boosted
- Findingown data
Transfection of BMDMs with miR-124 downregulates CD45, CD11b, F4/80, MHC class II and CD86.
“Transfection of BMDMs with miR-124 resulted in downregulation of CD45, CD11b, F4/80, MHC class II and CD86 (Fig. 3a,b).”
Quote in the paperSubstantial claim - Findingown data
Knockdown of miR-124 in microglia and macrophages results in activation of these cells in vitro and in vivo.
“Conversely, knockdown of miR-124 in microglia and macrophages resulted in activation of these cells in vitro and in vivo.”
- Also stated in: § Effect of miR-124 inhibitors on microglia and macrophages · plain
“anti–miR-124 induced the activation of CD11b+GFP+ microglia and altered their morphology”
Quote in the paperSubstantial claim - Also stated in: § Effect of miR-124 inhibitors on microglia and macrophages · plain
- Findingown data
In healthy chimeric mice, microglia have a CD45low MHC class II− phenotype.
“In our model, microglia in healthy chimeric mice had a CD45lowMHC class II− phenotype”
Quote in the paperNot a substantial claim - Findingown data
Overexpression of miR-124 in macrophages transforms them from an activated phenotype into a quiescent CD45low MHC class IIlow phenotype resembling resting microglia.
“resulting in transformation of these cells from an activated phenotype into a quiescent CD45low, major histocompatibility complex (MHC) class IIlow phenotype resembling resting microglia.”
- Also stated in: § miR-124 deactivates bone marrow–derived macrophages in vitro · plain
“Transfection of BMDMs with miR-124 resulted in downregulation of CD45, CD11b, F4/80, MHC class II and CD86 (Fig. 3a,b).”
Quote in the paperSubstantial claim - Also stated in: § miR-124 deactivates bone marrow–derived macrophages in vitro · plain
- Findingown data
Administration of miR-124 during the preclinical stage of EAE completely prevents disease symptoms.
“Administration of miR-124 during the preclinical stage of EAE (beginning on day 7 after disease induction) completely prevented disease symptoms (Fig. 5a).”
Quote in the paperSubstantial claim - Findingown data
During the onset and peak of EAE, microglia upregulate CD45 and MHC class II.
“whereas during the onset and peak of EAE, microglia upregulated CD45 and MHC class II (Fig. 2a).”
Quote in the paperNot a substantial claim - Findingown data
Peripheral administration of miR-124 in EAE markedly suppresses disease.
“and marked suppression of disease.”
- Also stated in: § miR-124 inhibits EAE and reduces CNS inflammation · boosted
“Administration of miR-124 during the preclinical stage of EAE (beginning on day 7 after disease induction) completely prevented disease symptoms (Fig. 5a).”
Quote in the paperSubstantial claim - Also stated in: § miR-124 inhibits EAE and reduces CNS inflammation · boosted
- Findingreasoning
Peripheral administration of miR-124 in EAE reduces activation of myelin-specific T cells.
“reduced activation of myelin-specific T cells”
- Also stated in: § miR-124 inhibits EAE and reduces CNS inflammation · plain
“and indirectly reduced the activation of autoimmune CD4 T cells”
Quote in the paperSubstantial claim - Also stated in: § miR-124 inhibits EAE and reduces CNS inflammation · plain
- Findingown data
Overexpression of miR-124 in macrophages downregulates PU.1.
“Expression of the transcription factor PU.1, which is regulated by C/EBP-α and is also required for differentiation of monocytic-lineage cells29–31, was downregulated by miR-124 as well (Fig. 4c).”
Quote in the paperSubstantial claim - Findingown data
Cotransfection with miR-124 inhibits luciferase activity of a C/EBP-α 3′ UTR reporter by 72%.
“The transfected cells showed luciferase activity, which the cotransfection with miR-124 inhibited by 72% (Fig. 4e).”
Quote in the paperSubstantial claim - Findingown data
The level of miR-124 expression in microglia is comparable to that in cultured cortical neurons.
“The level of miR-124 expression in microglia was comparable to that in cultured cortical neurons”
Quote in the paperNot a substantial claim - Interpretationown data
In vivo administration of miR-124 suppresses EAE by affecting macrophages.
“Furthermore, in vivo administration of miR-124 suppresses EAE by affecting macrophages”
Quote in the paperSubstantial claim - Premisecitation
PU.1 can induce expression of CD45, CD11b, F4/80 and MHC class II.
“which, in turn, can induce expression of CD45, CD11b, F4/80 and MHC class II32,33.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [32] Anderson, K.L. et al. PU.1 is a lineage-specific regulator of tyrosine phosphatase CD45. J. Biol. Chem. 276, 7637–7642 (2001). source
Queued — the background check reaches it, usually within a day.
- cites [33] Nishiyama, C. et al. Functional analysis of PU.1 domains in monocyte-specific gene regulation. FEBS Lett. 561, 63–68 (2004). source
Queued — the background check reaches it, usually within a day.
- Interpretationown data
miR-124 expression correlates inversely with the activation state of microglia and macrophages in the CNS.
“Collectively, these data demonstrate that miR-124 expression correlates inversely with the activation state of microglia and macrophages in the CNS.”
Quote in the paperSubstantial claim - Study design and conductreasoning
Chimeric mice were used to discriminate microglia from peripheral macrophages during EAE.
“As there are no markers to distinguish microglia from peripheral macrophages that migrate into the CNS during inflammation, we used chimeric mice to discriminate between these populations.”
Quote in the paperSubstantial claim- Rests on an assumption: There are no markers to distinguish microglia from peripheral macrophages that migrate into the CNS during inflammation.
- Premisecitation
C/EBP-α directly activates transcription of PU.1 in monocytes.
“It has previously been shown that C/EBP-α directly activates transcription of PU.1 in monocytes30”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [30] Cai, D.H. et al. C/EBPα:AP-1 leucine zipper heterodimers bind novel DNA elements, activate the PU.1 promoter and direct monocyte lineage commitment more potently than C/EBPα homodimers or AP-1. Oncogene 27, 2772–2779 (2008). source
- Interpretationown data
The miR-124 expression pattern suggests a link between miR-124 and the activation state of microglia and macrophages.
“The miR-124 expression pattern (downregulation in microglia at EAE onset when the cells become activated, and upregulation in peripheral macrophages at EAE onset and recovery when the subset of cells deactivates) suggests a link between miR-124 and the activation state of microglia and macrophages (Figs. 1 and 2).”
Quote in the paperSubstantial claim - Interpretationown data
miR-124 is a key regulator of microglia quiescence in the central nervous system.
“These findings identify miR-124 both as a key regulator of microglia quiescence in the central nervous system”
- Also stated in: § DISCUSSION · plain
“We found that miR-124 is also expressed in microglia of the normal CNS, where it has a role in maintaining the cells in a quiescent state, as shown in our in vitro and in vivo knockdown experiments.”
Quote in the paperSubstantial claim - Also stated in: § DISCUSSION · plain
- Premisecitation
C/EBP-α binds the promoter region of PU.1 and induces its transcription.
“As C/EBP-α binds the promoter region of PU.1 and induces its transcription30,31”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [30] Cai, D.H. et al. C/EBPα:AP-1 leucine zipper heterodimers bind novel DNA elements, activate the PU.1 promoter and direct monocyte lineage commitment more potently than C/EBPα homodimers or AP-1. Oncogene 27, 2772–2779 (2008). source
- cites [31] Yeamans, C. et al. C/EBPα binds and activates the PU.1 distal enhancer to induce monocyte lineage commitment. Blood 110, 3136–3142 (2007). source
- Interpretationown data
Deactivation of macrophages by intravenous injection of miR-124 led to suppression of EAE in three different mouse models of the disease.
“Indeed, we found that deactivation of macrophages by intravenous injection of miR-124 led to suppression of EAE in three different mouse models of the disease.”
Quote in the paperSubstantial claim - Interpretationown data
miR-124 is a modulator of monocyte and macrophage activation.
“and as a previously unknown modulator of monocyte and macrophage activation.”
- Also stated in: § DISCUSSION · boosted
“Our investigation provides new insights into the role of CNS-specific miR-124 in the function of normal microglia and the control of macrophage activation during inflammation.”
Quote in the paperSubstantial claim - Also stated in: § DISCUSSION · boosted
- Classified as probably not a substantial claim. 8
- May combine two claims. 35
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationmiR-124 is expressed in the CNS by neuronal cells.
“miR-124 is known to be expressed in the CNS by neuronal cells23,39–41.”
Quote in the paperNot a substantial claim1 of 4 sources checked- cites [23] Smirnova, L. et al. Regulation of miRNA expression during neural cell specification. Eur. J. Neurosci. 21, 1469–1477 (2005). source
- cites [39] Mishima, T., Mizuguchi, Y., Kawahigashi, Y. & Takizawa, T. RT-PCR–based analysis of microRNA (miR-1 and -124) expression in mouse CNS. Brain Res. 1131, 37–43 (2007). source
- cites [40] Visvanathan, J., Lee, S., Lee, B., Lee, J.W. & Lee, S.K. The microRNA miR-124 antagonizes the anti-neural REST/SCP1 pathway during embryonic CNS development. Genes Dev. 21, 744–749 (2007). source
- cites [41] Kapsimali, M. et al. MicroRNAs show a wide diversity of expression profiles in the developing and mature central nervous system. Genome Biol. 8, R173 (2007). source
May combine two claims.
Findingown dataDuring EAE onset, approximately 40% of peripheral macrophages show a partially deactivated MHC class II− phenotype, whereas during recovery, approximately 40% become CD45low MHC class II−.
“During onset of EAE, ~40% of peripheral macrophages showed a partially deactivated MHC class II− phenotype, whereas during recovery, ~40% of peripheral macrophages became CD45lowMHC class II− (Fig. 2a).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataDuring recovery, the level of MHC class II in microglia returns to normal, but a subset of cells remains CD45hi.
“During recovery, the level of MHC class II in microglia returned to normal, but a subset of cells remained CD45hi, suggesting some residual level of activation.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataIn our experiments, activated microglia downregulated miR-124, and high levels of C/EBP-α expression were associated with the activated CD45hi phenotype.
“In our experiments, activated microglia downregulated miR-124, and high levels of C/EBP-α expression were associated with the activated CD45hi phenotype.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataTreatment with miR-124 decreases the absolute numbers of lymphocytes, CD4 T cells, macrophages and activated CD45hi microglia in the CNS.
“Figure 5d shows how the treatment with miR-124 decreased the absolute numbers of lymphocytes, CD4 T cells and macrophages and activated CD45hi microglia in the CNS.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataMutations within two predicted miR-124 binding sites substantially reduce luciferase responsiveness to miR-124, and mutations within all three predicted sites nearly abolish it.
“Mutations of this reporter construct within two predicted miR-124 binding sites (C/EBP-αmut1–2) substantially reduced the luciferase responsiveness to miR-124, and mutations within all three predicted sites (C/EBP-αmut1–3) nearly abolished it (Fig. 4e).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIntravenously injected siRNA specific for C/EBP-α has similar effects on disease symptoms as miR-124, whereas mutant miR-124 lacking the C/EBP-α mRNA binding sequence has no effect on disease score.
“Intravenously injected small interfering RNA (siRNA) specific for C/EBP-α had similar effects on disease symptoms, whereas mutant miR-124 lacking the C/EBP-α mRNA binding sequence had no effect on the disease score (Supplementary Data and Supplementary Fig. 9a).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataConditional knockout of Cebpa reduces C/EBP-α protein and results in reduced expression of PU.1, CD11b, MHC class II and CD86.
“This conditional knockout reduced levels of C/EBP-α protein, which resulted in reduced expression of PU.1, CD11b, MHC class II and CD86 (Supplementary Data and Supplementary Fig. 7).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown datamiR-124 is expressed in microglia but not in peripheral monocytes or macrophages.
“We found that brain-specific miR-124 is expressed in microglia but not in peripheral monocytes or macrophages.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataInflammatory lesions in the white matter of the lumbar spinal cord were evident in the control group but undetectable in miR-124-treated mice.
“Inflammatory lesions containing nucleated and CD11b+ cells in the white matter of the lumbar spinal cord were evident in the control group but undetectable in the miR-124–treated mice (Fig. 5e).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIntracranial injection of anti-miR-124 induces activation of CD11b+GFP+ microglia and alters their morphology.
“When injected into C57BL/6→Cx3cr1GFP/+ chimeric mice that express GFP in microglia but not in peripheral macrophages, anti–miR-124 induced the activation of CD11b+GFP+ microglia and altered their morphology (Supplementary Data and Supplementary Fig. 16b–e).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown datamiR-124 overexpression decreases the proportion of CD45hi C/EBP-α+ and CD45hi PU.1+ cells by 70% and 80%, respectively.
“Quantification of the four experiments shows that miR-124 overexpression decreased the proportion of CD45hi C/EBP-α+ and CD45hiPU.1+ cells by 70% and 80%, respectively (Fig. 4d).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataActivated MHC class II+ peripheral macrophages express very low levels of miR-124, whereas deactivated MHC class II− macrophages upregulate miR-124 by 4.2-fold.
“Activated MHC class II+ peripheral macrophages expressed very low levels of miR-124, whereas deactivated MHC class II− macrophages upregulated miR-124 by 4.2-fold (Fig. 2b).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataDuring mouse prenatal and postnatal development, microglia show an activated phenotype with a low level of miR-124 expression.
“During mouse prenatal and postnatal development, microglia showed an activated phenotype with a low level of miR-124 expression (Supplementary Data and Supplementary Fig. 3).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataTransfection of macrophages with miR-124 inhibits expression of TNF-α and inducible nitric oxide synthase, and upregulates TGF-β1 and M2 markers arginase I and FIZZ1.
“Transfection of macrophages with miR-124 also inhibited expression of TNF-α (Fig. 3c) and inducible nitric oxide synthase (Fig. 3d) by these cells, and upregulated both the anti-inflammatory cytokine TGF-β1 (Fig. 3d,e) and markers of alternatively activated (M2) macrophages arginase I and FIZZ1 (Fig. 3d).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataTransfection with miR-124 reduces the number of proliferating cells and alters cell morphology.
“Transfection with miR-124 also resulted in a reduced number of proliferating cells and altered cell morphology (Supplementary Data and Supplementary Fig. 4).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown datamiR-124 suppresses EAE in SJL mice and in Ifng−/− mice.
“Disease symptoms were also substantially ameliorated in both EAE-prone SJL mice as well as in Ifng−/− mice, which have a more severe form of EAE (Supplementary Data and Supplementary Fig. 8a,b).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataTransfection of macrophages with miR-124 downregulates both CD45 and C/EBP-α, and the C/EBP-α− phenotype corresponds to the CD45low phenotype.
“Two-color flow cytometry further confirmed that transfection of macrophages with miR-124 resulted in downregulation of both CD45 and C/EBP-α (Fig. 4c), and indicated that the C/EBP-α− phenotype corresponded to the CD45low phenotype of macrophages.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown datamiR-223 is expressed in peripheral macrophages but not in microglia.
“whereas myeloid-specific miR-223 (refs. 6,22) was expressed in the macrophages in the periphery, but not in the microglia (Fig. 1b).”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [6] Johnnidis, J.B. et al. Regulation of progenitor cell proliferation and granulocyte function by microRNA-223. Nature 451, 1125–1129 (2008). source
- cites [22] Fukao, T. et al. An evolutionarily conserved mechanism for microRNA-223 expression revealed by microRNA gene profiling. Cell 129, 617–631 (2007). source
May combine two claims.
Findingown dataIn mice with EAE treated with miR-124, the CNS had primarily CD11b+CD45low resting microglia and no signs of microglia activation or leukocyte infiltration, whereas control mice had activated macrophages/microglia and leukocytes.
“In contrast, the mice treated with miR-124 had primarily CD11b+CD45low resting microglia (Fig. 5c, miR-124, region R1) and no signs of microglia activation or leukocyte infiltration in the CNS (Fig. 5c, miR-124, regions R2 and R3).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataTreatment of mice with miR-124 at the onset of EAE substantially ameliorates clinical symptoms and enhances recovery.
“Treatment of mice with miR-124 at the onset of EAE (starting day 13 after EAE induction) also substantially ameliorated clinical symptoms and enhanced recovery (Fig. 5b).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataPeripheral administration of miR-124 during EAE directly affects macrophages and deactivates them, and indirectly reduces activation of autoimmune CD4 T cells.
“Subsequent experiments showed that peripheral administration of miR-124 during EAE directly affected macrophages and deactivated them, and indirectly reduced the activation of autoimmune CD4 T cells (Supplementary Data, Supplementary Figs. 10–15 and Supplementary Table 3).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataC/EBP-α expression is reduced in miR-124-transfected BMDMs by 50-70% at the protein level and by 50% at the mRNA level.
“C/EBP-α expression was reduced in miR-124–transfected BMDMs by 50–70% on the protein level (Fig. 4b) and by 50% on the mRNA level (Fig. 3d).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe highest level of miR-124 expression is in resting CD45low MHC class II− microglia, whereas activated MHC class II+ microglia express 60% lower miR-124.
“The highest level of miR-124 expression was observed in resting CD45lowMHC class II− microglia, whereas activated MHC class II+ microglia expressed a 60% lower level of miR-124 (Fig. 2b).”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown datamiR-124 not only deactivates macrophages but also skews their polarization from an M1 toward an M2 phenotype.
“These data suggest that miR-124 not only deactivates macrophages but also skews their polarization from an M1 toward an M2 phenotype.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Study design and conductcitationThe study acknowledges that CD11b+F4/80+ cells may include small numbers of myeloid dendritic cells and that peripheral macrophages may be contaminated by small numbers of GFP+ microglia.
“In this study, we refer to cells expressing CD11b+F4/80+ as ‘macrophages’ even though they may include small numbers of CD11b+CD11c+F4/80+ myeloid dendritic cells. Peripheral macrophages may also be contaminated by small numbers of GFP+ microglia that enter the CNS during reconstitution14.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [14] Ponomarev, E.D., Shriver, L.P., Maresz, K. & Dittel, B.N. Microglial cell activation and proliferation precedes the onset of CNS autoimmunity. J. Neurosci. Res. 81, 374–389 (2005). source
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationTNFR1 is a direct downstream target for C/EBP-α and C/EBP-β.
“It has previously been shown that the TNF receptor (TNFR1) is a direct downstream target for C/EBP-α and C/EBP-β35”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [35] Bristol, J.A., Morrison, T.E. & Kenney, S.C. CCAAT/enhancer binding proteins α and β regulate the tumor necrosis factor receptor 1 gene promoter. Mol. Immunol. 46, 2706–2713 (2009). source
May combine two claims.
Interpretationown dataIn vivo administration of miR-124 directly affects macrophages, and this results in deficient activation of encephalitogenic T cells.
“Our extensive analysis showed that in vivo administration of miR-124 directly affected macrophages, and this, in turn, resulted in deficient activation of encephalitogenic T cells (Supplementary Discussion).”
Quote in the paperSubstantial claimMay combine two claims.
InterpretationreasoningmiR-124 controls multiple markers of macrophage activation by direct inhibition of C/EBP-α and its downstream transcription factor PU.1.
“These data suggest that miR-124 controls multiple markers of macrophage activation by direct inhibition of C/EBP-α and its downstream transcription factor PU.1.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown datamiR-124 directly targets the mRNA encoding C/EBP-α and reduces expression of this protein.
“These data confirm that miR-124 directly targets the mRNA encoding C/EBP-α and reduces expression of this protein.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationmiR-124 inhibits proliferation and induces differentiation of medulloblastoma and glioblastoma cancer cells.
“In addition, miR-124 inhibits proliferation and induces differentiation of medulloblastoma and glioblastoma cancer cells, which originate from immature neural cells43,44.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [43] Pierson, J., Hostager, B., Fan, R. & Vibhakar, R. Regulation of cyclin dependent kinase 6 by microRNA 124 in medulloblastoma. J. Neurooncol. 90, 1–7 (2008). source
- cites [44] Silber, J. et al. miR-124 and miR-137 inhibit proliferation of glioblastoma multiforme cells and induce differentiation of brain tumor stem cells. BMC Med. 6, 14 (2008). source
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationTNF-α and TNFR1 may enhance each other's expression by an autocrine-paracrine mechanism.
“and that TNF-α and TNFR1 may enhance each other's expression by an autocrine-paracrince mechanism36,37.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [36] Trefzer, U. et al. The 55-kD tumor necrosis factor receptor on human keratinocytes is regulated by tumor necrosis factor-α and by ultraviolet B radiation. J. Clin. Invest. 92, 462–470 (1993). source
- cites [37] Cardinaux, J.R., Allaman, I. & Magistretti, P.J. Pro-inflammatory cytokines induce the transcription factors C/EBPβ and C/EBPδ in astrocytes. Glia 29, 91–97 (2000). source
Not checked in the free run.
May combine two claims.
Interpretationown dataTreatment of mice with miR-124 ameliorates both EAE symptoms and inflammation in the CNS.
“Thus, treatment of mice with miR-124 ameliorated both EAE symptoms and inflammation in the CNS.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationmiR-124 promotes differentiation of neuronal progenitors to mature neurons by targeting small C-terminal domain phosphatase-1 and polypyrimidine tract-binding protein-1.
“It promotes differentiation of neuronal progenitors to mature neurons by targeting small C-terminal domain phosphatase-1 and polypyrimidine tract–binding protein-1 that repress expression of neuronal genes in non-neuronal cells18,20,40.”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [18] Cheng, L.C., Pastrana, E., Tavazoie, M. & Doetsch, F. miR-124 regulates adult neurogenesis in the subventricular zone stem cell niche. Nat. Neurosci. 12, 399–408 (2009). source
- cites [20] Makeyev, E.V., Zhang, J., Carrasco, M.A. & Maniatis, T. The MicroRNA miR-124 promotes neuronal differentiation by triggering brain-specific alternative pre-mRNA splicing. Mol. Cell 27, 435–448 (2007). source
- cites [40] Visvanathan, J., Lee, S., Lee, B., Lee, J.W. & Lee, S.K. The microRNA miR-124 antagonizes the anti-neural REST/SCP1 pathway during embryonic CNS development. Genes Dev. 21, 744–749 (2007). source
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationmiR-124 can regulate expression of multiple target genes, including those encoding CDKs and MCP-1.
“It has been shown with human HeLa cells and synoviocytes that miR-124 can regulate expression of multiple target genes, including those encoding CDKs and MCP-1 (refs. 17,42).”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [17] Lim, L.P. et al. Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs. Nature 433, 769–773 (2005). source
- cites [42] Nakamachi, Y. et al. MicroRNA-124a is a key regulator of proliferation and monocyte chemoattractant protein 1 secretion in fibroblast-like synoviocytes from patients with rheumatoid arthritis. Arthritis Rheum. 60, 1294–1304 (2009). source
May combine two claims.
Interpretationown datamiR-124 directly inhibits expression of C/EBP-α, which results in downregulation of PU.1 and decreases expression of macrophage activation markers CD45, CD11b, F4/80, MHC class II and CD86.
“We have demonstrated that miR-124 directly inhibits expression of the C/EBP-α transcription factor, which results in downregulation of PU.1, another master regulator of monocytic cell differentiation and decreases expression of the macrophage activation markers CD45, CD11b, F4/80, MHC class II and CD86.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationNormal adult microglia do not express C/EBP-α, but this transcription factor can be induced during inflammation.
“Normal adult microglia do not express C/EBP-α, but this transcription factor can be induced during inflammation38.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [38] Walton, M. et al. CCAAT-enhancer binding proteinα is expressed in activated microglial cells after brain injury. Brain Res. Mol. Brain Res. 61, 11–22 (1998). source
May combine two claims.
PremisecitationQuiescent microglia show properties of M2 macrophages and M2 macrophages are crucial for suppression of EAE.
“These results are consistent with our observations that quiescent microglia show properties of M2 macrophages and that M2 macrophages are crucial for the suppression of EAE45.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [45] Ponomarev, E.D., Maresz, K., Tan, Y. & Dittel, B.N. CNS-derived interleukin-4 is essential for the regulation of autoimmune inflammation and induces a state of alternative activation in microglial cells. J. Neurosci. 27, 10714–10721 (2007). source
May combine two claims.
Interpretationown datamiR-124 has a key role in inhibiting macrophage activation and promoting microglial differentiation under physiological conditions in the CNS microenvironment.
“In summary, our findings demonstrate that miR-124 has a key role in inhibiting macrophage activation and promoting microglial differentiation under physiological conditions in the CNS microenvironment.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationPU.1 controls proliferation of macrophages by upregulating the receptor for M-CSF.
“Moreover, PU.1 controls proliferation of macrophages by upregulating the receptor for M-CSF34.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [34] Celada, A. et al. The transcription factor PU.1 is involved in macrophage proliferation. J. Exp. Med. 184, 61–69 (1996). source
Not checked in the free run.
May combine two claims.
Interpretationown datamiR-124 has a role in maintaining the quiescent phenotype of microglia in the normal CNS, and this phenotype is driven by paracrine interaction of microglia with local stromal cells.
“These data demonstrate that miR-124 has a role in maintaining the quiescent phenotype of microglia in the normal CNS, and this phenotype is driven by the paracrine interaction of microglia with local stromal cells.”
Quote in the paperSubstantial claim
The paper relies on this without support.
There are no markers to distinguish microglia from peripheral macrophages that migrate into the CNS during inflammation.
“As there are no markers to distinguish microglia from peripheral macrophages that migrate into the CNS during inflammation, we used chimeric mice to discriminate between these populations.”
The paper relies on this without support.
The mechanisms maintaining the unique resting phenotype of microglia in the normal CNS remain unknown.
“In contrast to other tissue-specific resident macrophages, microglia show a resting phenotype with low expression of both the pan-leukocyte marker CD45 and MHC class II (CD45lowMHC class IIlow) in the normal CNS, but the mechanisms maintaining this unique phenotype remain unknown.”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Attenuating PU.1 can potentially restrain microglia-mediated neuroinflammation in various neurological disorders.
“In various neurological disorders, attenuating PU.1 can potentially restrain microglia-mediated neuroinflammation (16).”
From Arresting the bad seed: HDAC3 regulates proliferation of different microglia after ischemic stroke (2024) · cites this paper as [16]
The Results (‘miR-124 downregulates C/EBP-α and PU.1’; page unavailable) show that miR-124 indirectly lowers PU.1 and macrophage activation markers. The Results (‘miR-124 inhibits EAE and reduces CNS inflammation’; page unavailable) report reduced activated microglia and CNS inflammation in treated EAE mice. The paper does not establish that attenuating PU.1 itself restrains microglia-mediated neuroinflammation across various neurological disorders; its intervention was miR-124, tested for inflammation in EAE. (LLM, conf=0.83)
Experimental — accuracy not yet measuredThe latter role is also found in the model of experimental autoimmune encephalomyelitis (EAE) and optic nerve injury.
“The latter role is also found in the model of experimental autoimmune encephalomyelitis (EAE) (16) and optic nerve injury (57).”
From Arresting the bad seed: HDAC3 regulates proliferation of different microglia after ischemic stroke (2024) · cites this paper as [16]
In murine microglia, miR-124 downregulates C/EBP-α and subsequently PU.1, inducing microglia quiescence in the central nervous system.
“In murine microglia, miR-124 downregulates C/EBP-α (and subsequently PU.1, its downstream effector), and thus induces microglia quiescence in the central nervous system.”
From MicroRNAs as Regulators of Phagocytosis (2022) · cites this paper as [232]
In experimental autoimmune encephalomyelitis, a murine model of multiple sclerosis, symptoms may be completely prevented by miR-124 overexpression.
“In experimental autoimmune encephalomyelitis, a murine model of multiple sclerosis, symptoms may be completely prevented by miR-124 overexpression [232].”
From MicroRNAs as Regulators of Phagocytosis (2022) · cites this paper as [232]
Reducing PU.1 levels through miR124 overexpression decreases expression of TNF-α, iNOS and MHC-II, thereby suppressing neuroinflammatory response in macrophages.
“Reducing PU.1 levels through miR124 overexpression can decrease expression of TNF-α, iNOS and MHC-II, thereby suppressing neuroinflammatory response in macrophages [491].”
From Molecular and cellular mechanisms underlying the pathogenesis of Alzheimer’s disease (2020) · cites this paper as [491]
Agonizing miR-124 is beneficial in models of multiple sclerosis.
“For example, it has been shown that agonizing miR-124 is beneficial in models of MS196.”
From Microglial signatures and their role in health and disease (2018) · cites this paper as [196]
LXRα/β agonists have known anti-inflammatory and Aβ-clearing effects in AD models, and Cebpα regulates PU.1 which maintains microglial quiescence.
“These observations agree with known anti-inflammatory and Aβ-clearing effects of LXRα/β agonists in AD models [40–42] as well as the role of Cebpα in regulating PU.1 which maintains microglial quiescence [43].”
From Identification and therapeutic modulation of a pro-inflammatory subset of disease-associated-microglia in Alzheimer’s disease (2018) · cites this paper as [43]
miR-124 is suggested to directly inhibit C/EBPa and PU.1 to prevent acquisition of a reactive microglia state.
“miR-124 is suggested to directly inhibit C/EBPa and PU.1 to prevent acquisition of a reactive microglia state [44].”
From Transcriptional and Epigenetic Regulation of Microglia in Health and Disease (2019) · cites this paper as [44]
These studies suggest that miRNAs including miR124 and miR155 act as key regulators of microglia quiescence in the CNS.
“These studies suggest that miRNAs including miR124 and miR155 act as key regulators of microglia quiescence in the CNS.”
From Transcriptional and Epigenetic Regulation of Microglia in Health and Disease (2019) · cites this paper as [44]
Several miRNAs including miR-124 and miR-155 modulate the development of microglial cells.
“Several miRNAs including miR-124 and miR-155 modulate the development of microglial cells.”
From Transcriptional and Epigenetic Regulation of Microglia in Health and Disease (2019) · cites this paper as [44]
miR-124 is a brain-enriched microRNA that is highly expressed in microglia and is critical for maintaining microglia in a quiescent state.
“MicroRNA-124 (miR-124), a brain-enriched microRNA, is known to regulate microglial quiescence.”
From Engineered Extracellular Vesicles Loaded With miR-124 Attenuate Cocaine-Mediated Activation of Microglia (2020) · cites this paper as Ponomarev et al., 2011
miR-124 is highly expressed in microglia and is critical for maintaining microglia in a quiescent state.
“It has been well-recognized that miR-124 is highly expressed in microglia and is critical for maintaining microglia in a quiescent state (Ponomarev et al., 2011; Veremeyko et al., 2013; Svahn et al., 2016).”
From Engineered Extracellular Vesicles Loaded With miR-124 Attenuate Cocaine-Mediated Activation of Microglia (2020) · cites this paper as Ponomarev et al., 2011
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- Authors
- Ponomarev, E. D., Veremeyko, T., Barteneva, N., Krichevsky, A. M., & Weiner, H. L.
- Affiliations
- Brigham and Women's Hospital (US)
- Harvard University (US)
- Corresponding author
- Krichevsky, Anna M
- Weiner, Howard L
- Venue
- Nature Medicine
- Published
- 2010-12-05
- Volume
- 17
- Issue
- 1
- Pages
- 64-70
- ISSN
- 1078-8956 (ISSN-L)
- 1546-170X
- PMC
- PMC3044940
- OpenAlex
- W2156023352
- Semantic Scholar
- 201a8fce4fc51465ff93360ee1e1b291babf5337
- Cited by
- 787
- References
- 45
- Citations by year
- 2026: 21 · 2025: 40 · 2024: 34 · 2023: 42 · 2022: 44 · 2021: 53 · 2020: 64 · 2019: 54 · 2018: 64 · 2017: 64 · 2016: 66 · 2015: 53 · 2014: 49 · 2013: 73 · 2012: 42
- FWCI
- 25.61
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature Medicine (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- Funders
- National Institute of Neurological Disorders and Stroke (R01NS071039)
- Topics
- Life Sciences › Neuroscience › Neurology › Neuroinflammation and Neurodegeneration Mechanisms
- Health Sciences › Medicine › Pathology and Forensic Medicine › Multiple Sclerosis Research Studies
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › MicroRNA in disease regulation
- Keywords
- miR-124, experimental autoimmune encephalomyelitis, macrophage deactivation, C/EBPα, PU.1, myelin-specific T cells, neuroinflammation, monocyte activation
- MeSH terms
- Animals, Brain, Encephalomyelitis, Autoimmune, Experimental, Homeostasis, Humans, Inflammation, Macrophages, Monocytes, Neurons, Microglia, CCAAT-Enhancer-Binding Proteins, MicroRNAs, Mice, Rats
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