Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

Cited by (764)

Items 401–500 of 764

1. Canine osteosarcoma genome sequencing identifies recurrent mutations in DMD and the histone methyltransferase gene SETD2
   Gardner, Heather L., Sivaprakasam, Karthigayini, Briones, Natalia, Zismann, Victoria, Perdigones, Nieves, Drenner, Kevin, Facista, Salvatore, Richholt, Ryan, Liang, Winnie, Aldrich, Jessica et al. · 2019 · Communications Biology
2. Functional Genomic Analyses Identify Pathways Dysregulated by Progranulin Deficiency, Implicating Wnt Signaling
   Rosen, Ezra Y., Wexler, Eric M., Versano, Revital, Coppola, Giovanni, Gao, Fuying, Winden, Kellen D., Oldham, Michael C., Martens, Lauren Herl, Zhou, Ping, Farese, Robert V. et al. · 2011 · Neuron
3. Minimal PU.1 reduction induces a preleukemic state and promotes development of acute myeloid leukemia
   Will, Britta, Vogler, Thomas O, Narayanagari, Swathi, Bartholdy, Boris, Todorova, Tihomira I, da Silva Ferreira, Mariana, Chen, Jiahao, Yu, Yiting, Mayer, Jillian, Barreyro, Laura et al. · 2015 · Nature Medicine
4. E2F7 represses a network of oscillating cell cycle genes to control S-phase progression
   Westendorp, Bart, Mokry, Michal, Groot Koerkamp, Marian J.A., Holstege, Frank C.P., Cuppen, Edwin, de Bruin, Alain · 2012 · Nucleic Acids Research
5. Transcriptomic and proteomic analyses of the Aspergillus fumigatus hypoxia response using an oxygen-controlled fermenter
   Barker, Bridget M, Kroll, Kristin, Vödisch, Martin, Mazurie, Aurélien, Kniemeyer, Olaf, Cramer, Robert A · 2012 · BMC Genomics
6. Proteome response of Phaeodactylum tricornutum , during lipid accumulation induced by nitrogen depletion
   Longworth, Joseph, Wu, Danying, Huete-Ortega, María, Wright, Phillip C., Vaidyanathan, Seetharaman · 2016 · Algal Research
7. Trem2 deletion enhances tau dispersion and pathology through microglia exosomes
   Zhu, Bing, Liu, Yan, Hwang, Spring, Archuleta, Kailey, Huang, Huijie, Campos, Alex, Murad, Rabi, Piña-Crespo, Juan, Xu, Huaxi, Huang, Timothy Y. · 2022 · Molecular Neurodegeneration
8. Deficiency of TYROBP, an adapter protein for TREM2 and CR3 receptors, is neuroprotective in a mouse model of early Alzheimer’s pathology
   Haure-Mirande, Jean-Vianney, Audrain, Mickael, Fanutza, Tomas, Kim, Soong Ho, Klein, William L., Glabe, Charles, Readhead, Ben, Dudley, Joel T., Blitzer, Robert D., Wang, Minghui et al. · 2017 · Acta Neuropathologica
9. MiR-146a Negatively Regulates TLR2-Induced Inflammatory Responses in Keratinocytes
   Meisgen, Florian, Xu Landén, Ning, Wang, Aoxue, Réthi, Bence, Bouez, Charbel, Zuccolo, Michela, Gueniche, Audrey, Ståhle, Mona, Sonkoly, Enikö, Breton, Lionel et al. · 2014 · Journal of Investigative Dermatology
10. Chromosomal contacts connect loci associated with autism, BMI and head circumference phenotypes
    2p15 Consortium, Loviglio, M N, 16p11.2 Consortium, Leleu, M, Männik, K, Passeggeri, M, Giannuzzi, G, van der Werf, I, Waszak, S M, Zazhytska, M et al. · 2017 · Molecular Psychiatry
11. DNA Methylation Patterns Separate Senescence from Transformation Potential and Indicate Cancer Risk
    Xie, Wenbing, Kagiampakis, Ioannis, Pan, Lixia, Zhang, Yang W., Murphy, Lauren, Tao, Yong, Kong, Xiangqian, Kang, Byunghak, Xia, Limin, Carvalho, Filipe L.F. et al. · 2018 · Cancer Cell
12. Deep proteome analysis identifies age-related processes in C. elegans
    Narayan, Vikram, Ly, Tony, Pourkarimi, Ehsan, Murillo, Alejandro Brenes, Gartner, Anton, Lamond, Angus I., Kenyon, Cynthia · 2016 · Cell Systems
13. Widespread activation of developmental gene expression characterized by PRC1-dependent chromatin looping
    Loubiere, V., Papadopoulos, G. L., Szabo, Q., Martinez, A-M., Cavalli, G. · 2020 · Science Advances
14. CELF4 regulates translation and local abundance of a vast set of mRNAs, including genes associated with regulation of synaptic function
    Wagnon, Jacy L., Briese, Michael, Sun, Wenzhi, Mahaffey, Connie L., Curk, Tomaž, Rot, Gregor, Ule, Jernej, Frankel, Wayne N. · 2012 · PLoS Genetics
15. GeneFriends: a human RNA-seq-based gene and transcript co-expression database
    van Dam, Sipko, Craig, Thomas, de Magalhães, João Pedro · 2015 · Nucleic Acids Research
16. Systems‐wide analysis of BCR signalosomes and downstream phosphorylation and ubiquitylation
    Satpathy, Shankha, Wagner, Sebastian A, Beli, Petra, Gupta, Rajat, Kristiansen, Trine A, Malinova, Dessislava, Francavilla, Chiara, Tolar, Pavel, Bishop, Gail A, Hostager, Bruce S et al. · 2015 · Molecular Systems Biology
17. Induced pluripotent stem cells from human revertant keratinocytes for the treatment of epidermolysis bullosa
    Umegaki-Arao, Noriko, Pasmooij, Anna M. G., Itoh, Munenari, Cerise, Jane E., Guo, Zongyou, Levy, Brynn, Gostyński, Antoni, Rothman, Lisa R., Jonkman, Marcel F., Christiano, Angela M. · 2014 · Science Translational Medicine
18. Elongation Factor TFIIS Prevents Transcription Stress and R-Loop Accumulation to Maintain Genome Stability
    Zatreanu, Diana, Han, Zhong, Mitter, Richard, Tumini, Emanuela, Williams, Hannah, Gregersen, Lea, Dirac-Svejstrup, A. Barbara, Roma, Stefania, Stewart, Aengus, Aguilera, Andres et al. · 2019 · Molecular Cell
19. Tau drives translational selectivity by interacting with ribosomal proteins
    Koren, Shon A., Hamm, Matthew J., Meier, Shelby E., Weiss, Blaine E., Nation, Grant K., Chishti, Emad A., Arango, Juan Pablo, Chen, Jing, Zhu, Haining, Blalock, Eric M. et al. · 2019 · Acta Neuropathologica
20. LEDGF/p75 interacts with mRNA splicing factors and targets HIV-1 integration to highly spliced genes
    Singh, Parmit Kumar, Plumb, Matthew R., Ferris, Andrea L., Iben, James R., Wu, Xiaolin, Fadel, Hind J., Luke, Brian T., Esnault, Caroline, Poeschla, Eric M., Hughes, Stephen H. et al. · 2015 · Genes & Development
21. Mistimed food intake and sleep alters 24-hour time-of-day patterns of the human plasma proteome
    Depner, Christopher M., Melanson, Edward L., McHill, Andrew W., Wright, Kenneth P. · 2018 · Proceedings of the National Academy of Sciences
22. Zwitterionic PEG-PC Hydrogels Modulate the Foreign Body Response in a Modulus-Dependent Manner
    Jansen, Lauren E., Amer, Luke D., Chen, Esther Y.-T., Nguyen, Thuy V., Saleh, Leila S., Emrick, Todd, Liu, Wendy F., Bryant, Stephanie J., Peyton, Shelly R. · 2018 · Biomacromolecules
23. REV-ERBα Regulates TH17 Cell Development and Autoimmunity
    Amir, Mohammed, Chaudhari, Sweena, Wang, Ran, Campbell, Sean, Mosure, Sarah A., Chopp, Laura B., Lu, Qun, Shang, Jinsai, Pelletier, Oliver B., He, Yuanjun et al. · 2018 · Cell Reports
24. Specific Glial Functions Contribute to Schizophrenia Susceptibility
    Goudriaan, A., de Leeuw, C., Ripke, S., Hultman, C. M., Sklar, P., Sullivan, P. F., Smit, A. B., Posthuma, D., Verheijen, M. H. G. · 2014 · Schizophrenia Bulletin
25. NOVA-dependent regulation of cryptic NMD exons controls synaptic protein levels after seizure
    Eom, Taesun, Zhang, Chaolin, Wang, Huidong, Lay, Kenneth, Fak, John, Noebels, Jeffrey L, Darnell, Robert B · 2013 · eLife
26. 3′ UTR lengthening as a novel mechanism in regulating cellular senescence.
    Chen, Meng, Lyu, Guoliang, Han, Miao, Nie, Hongbo, Shen, Ting, Chen, Wei, Niu, Yichi, Song, Yifan, Li, Xueping, Li, Huan et al. · 2018 · Genome Research
27. Lifespan analysis of brain development, gene expression and behavioral phenotypes in the Ts1Cje, Ts65Dn and Dp(16)1/Yey mouse models of Down syndrome
    Aziz, Nadine M., Guedj, Faycal, Pennings, Jeroen L. A., Olmos-Serrano, Jose Luis, Siegel, Ashley, Haydar, Tarik F., Bianchi, Diana W. · 2018 · Disease Models & Mechanisms
28. Activation of interferon signaling pathways in spinal cord astrocytes from an ALS mouse model
    Wang, Rengang, Yang, Bo, Zhang, Dongxian · 2011 · Glia
29. Gut microbiota–driven brain Aβ amyloidosis in mice requires microglia
    Dodiya, Hemraj B., Lutz, Holly L., Weigle, Ian Q., Patel, Priyam, Michalkiewicz, Julia, Roman-Santiago, Carlos J., Zhang, Can Martin, Liang, Yingxia, Srinath, Abhinav, Zhang, Xulun et al. · 2022 · Journal of Experimental Medicine
30. Evidence for additive and synergistic action of mammalian enhancers during cell fate determination
    Choi, Jinmi, Lysakovskaia, Kseniia, Stik, Gregoire, Demel, Carina, Söding, Johannes, Tian, Tian V, Graf, Thomas, Cramer, Patrick · 2021 · eLife
31. RNA-sequencing of the brain transcriptome implicates dysregulation of neuroplasticity, circadian rhythms and GTPase binding in bipolar disorder
    Akula, N, Barb, J, Jiang, X, Wendland, J R, Choi, K H, Sen, S K, Hou, L, Chen, D T W, Laje, G, Johnson, K et al. · 2014 · Molecular Psychiatry
32. Genome-wide siRNA screen for mediators of NF-κB activation
    Gewurz, Benjamin E., Towfic, Fadi, Mar, Jessica C., Shinners, Nicholas P., Takasaki, Kaoru, Zhao, Bo, Cahir-McFarland, Ellen D., Quackenbush, John, Xavier, Ramnik J., Kieff, Elliott · 2012 · Proceedings of the National Academy of Sciences
33. Arthritis flares mediated by tissue-resident memory T cells in the joint
    Chang, Margaret H., Levescot, Anaïs, Nelson-Maney, Nathan, Blaustein, Rachel B., Winden, Kellen D., Morris, Allyn, Wactor, Alexandra, Balu, Spoorthi, Grieshaber-Bouyer, Ricardo, Wei, Kevin et al. · 2021 · Cell Reports
34. Collagen-rich stroma in aggressive colon tumors induces mesenchymal gene expression and tumor cell invasion
    Vellinga, T T, den Uil, S, Rinkes, I H B, Marvin, D, Ponsioen, B, Alvarez-Varela, A, Fatrai, S, Scheele, C, Zwijnenburg, D A, Snippert, H et al. · 2016 · Oncogene
35. Aberrant Endometrial DNA Methylome and Associated Gene Expression in Women with Endometriosis
    Houshdaran, S., Nezhat, C. R., Vo, K. C., Zelenko, Z., Irwin, J. C., Giudice, L. C. · 2016 · Biology of Reproduction
36. Mutation of a U2 snRNA Gene Causes Global Disruption of Alternative Splicing and Neurodegeneration
    Jia, Yichang, Mu, John C., Ackerman, Susan L. · 2012 · Cell
37. Lambda interferon restructures the nasal microbiome and increases susceptibility to staphylococcus aureus superinfection
    Planet, Paul J., Parker, Dane, Cohen, Taylor S., Smith, Hannah, Leon, Justinne D., Ryan, Chanelle, Hammer, Tobin J., Fierer, Noah, Chen, Emily I., Prince, Alice S. · 2016 · mBio
38. Depletion of NK Cells Improves Cognitive Function in the Alzheimer Disease Mouse Model
    Zhang, Yuanyue, Fung, Ivan Ting Hin, Sankar, Poornima, Chen, Xiangyu, Robison, Lisa S, Ye, Longyun, D’Souza, Shanti S, Salinero, Abigail E, Kuentzel, Marcy L, Chittur, Sridar V et al. · 2020 · The Journal of Immunology
39. Active DNA demethylation promotes cell fate specification and the DNA damage response
    Wang, Dongpeng, Wu, Wei, Callen, Elsa, Pavani, Raphael, Zolnerowich, Nicholas, Kodali, Srikanth, Zong, Dali, Wong, Nancy, Noriega, Santiago, Nathan, William J. et al. · 2022 · Science
40. A limited capacity for microglial repopulation in the adult brain
    Najafi, Allison R., Crapser, Joshua, Jiang, Shan, Ng, Winnie, Mortazavi, Ali, West, Brian L., Green, Kim N. · 2018 · Glia
41. Identification of a Gene Regulatory Network Necessary for the Initiation of Oligodendrocyte Differentiation
    Swiss, Victoria A., Nguyen, Tung, Dugas, Jason, Ibrahim, Adiljan, Barres, Ben, Androulakis, Ioannis P., Casaccia, Patrizia · 2011 · PLoS ONE
42. Genome-wide identification of FoxO-dependent gene networks in skeletal muscle during C26 cancer cachexia
    Judge, Sarah M, Wu, Chia-Ling, Beharry, Adam W, Roberts, Brandon M, Ferreira, Leonardo F, Kandarian, Susan C, Judge, Andrew R · 2014 · BMC Cancer
43. HDAC6 inhibition restores TDP‐43 pathology and axonal transport defects in human motor neurons with TARDBP mutations
    Fazal, Raheem, Boeynaems, Steven, Swijsen, Ann, De Decker, Mathias, Fumagalli, Laura, Moisse, Matthieu, Vanneste, Joni, Guo, Wenting, Boon, Ruben, Vercruysse, Thomas et al. · 2021 · The EMBO Journal
44. Controlled induction of DNA double-strand breaks in the mouse liver induces features of tissue ageing
    White, Ryan R., Milholland, Brandon, de Bruin, Alain, Curran, Samuel, Laberge, Remi-Martin, van Steeg, Harry, Campisi, Judith, Maslov, Alexander Y., Vijg, Jan · 2015 · Nature Communications
45. Multi-Omics Approaches to Define Calcific Aortic Valve Disease Pathogenesis
    Blaser, Mark C., Kraler, Simon, Lüscher, Thomas F., Aikawa, Elena · 2021 · Circulation Research
46. Changes in the Transcriptome of Human Astrocytes Accompanying Oxidative Stress-Induced Senescence
    Crowe, Elizabeth P., Tuzer, Ferit, Gregory, Brian D., Donahue, Greg, Gosai, Sager J., Cohen, Justin, Leung, Yuk Y., Yetkin, Emre, Nativio, Raffaella, Wang, Li-San et al. · 2016 · Frontiers in Aging Neuroscience
47. Clock Genes Control Cortical Critical Period Timing
    Kobayashi, Yohei, Ye, Zhanlei, Hensch, Takao K. · 2015 · Neuron
48. Targeting histone K4 trimethylation for treatment of cognitive and synaptic deficits in mouse models of Alzheimer’s disease
    Cao, Qing, Wang, Wei, Williams, Jamal B., Yang, Fengwei, Wang, Zi-Jun, Yan, Zhen · 2020 · Science Advances
49. The MiDAC histone deacetylase complex is essential for embryonic development and has a unique multivalent structure
    Turnbull, Robert E., Fairall, Louise, Saleh, Almutasem, Kelsall, Emma, Morris, Kyle L., Ragan, T. J., Savva, Christos G., Chandru, Aditya, Millard, Christopher J., Makarova, Olga V. et al. · 2020 · Nature Communications
50. Whole transcriptome sequencing of the aging rat brain reveals dynamic RNA changes in the dark matter of the genome
    Wood, Shona H., Craig, Thomas, Li, Yang, Merry, Brian, de Magalhães, João Pedro · 2013 · AGE
51. A reference genome of the Chinese hamster based on a hybrid assembly strategy
    Rupp, Oliver, MacDonald, Madolyn L., Li, Shangzhong, Dhiman, Heena, Polson, Shawn, Griep, Sven, Heffner, Kelley, Hernandez, Inmaculada, Brinkrolf, Karina, Jadhav, Vaibhav et al. · 2018 · Biotechnology and Bioengineering
52. Evidences of Early Senescence in Multiple Myeloma Bone Marrow Mesenchymal Stromal Cells
    André, Thibaud, Meuleman, Nathalie, Stamatopoulos, Basile, De Bruyn, Cécile, Pieters, Karlien, Bron, Dominique, Lagneaux, Laurence · 2013 · PLoS ONE
53. Derivation, expansion and differentiation of induced pluripotent stem cells in continuous suspension cultures
    Fluri, David A, Tonge, Peter D, Song, Hannah, Baptista, Ricardo P, Shakiba, Nika, Shukla, Shreya, Clarke, Geoffrey, Nagy, Andras, Zandstra, Peter W · 2012 · Nature Methods
54. Social interaction-induced activation of RNA splicing in the amygdala of microbiome-deficient mice
    Stilling, Roman M, Moloney, Gerard M, Ryan, Feargal J, Hoban, Alan E, Bastiaanssen, Thomaz FS, Shanahan, Fergus, Clarke, Gerard, Claesson, Marcus J, Dinan, Timothy G, Cryan, John F · 2018 · eLife
55. Alzheimer disease pathology and the cerebrospinal fluid proteome
    Dayon, Loïc, Núñez Galindo, Antonio, Wojcik, Jérôme, Cominetti, Ornella, Corthésy, John, Oikonomidi, Aikaterini, Henry, Hugues, Kussmann, Martin, Migliavacca, Eugenia, Severin, India et al. · 2018 · Alzheimer's Research & Therapy
56. Epigenomic map of human liver reveals principles of zonated morphogenic and metabolic control
    Brosch, Mario, Kattler, Kathrin, Herrmann, Alexander, von Schönfels, Witigo, Nordström, Karl, Seehofer, Daniel, Damm, Georg, Becker, Thomas, Zeissig, Sebastian, Nehring, Sophie et al. · 2018 · Nature Communications
57. Demographically-based evaluation of genomic regions under selection in domestic dogs
    Freedman, Adam H., Schweizer, Rena M., Ortega-Del Vecchyo, Diego, Han, Eunjung, Davis, Brian W., Gronau, Ilan, Silva, Pedro M., Galaverni, Marco, Fan, Zhenxin, Marx, Peter et al. · 2016 · PLoS Genetics
58. miRNAs that Induce Human Cardiomyocyte Proliferation Converge on the Hippo Pathway
    Diez-Cuñado, Marta, Wei, Ke, Bushway, Paul J., Maurya, Mano R., Perera, Ranjan, Subramaniam, Shankar, Ruiz-Lozano, Pilar, Mercola, Mark · 2018 · Cell Reports
59. Neuronal Apolipoprotein E4 Expression Results in Proteome-Wide Alterations and Compromises Bioenergetic Capacity by Disrupting Mitochondrial Function
    Orr, Adam L., Kim, Chaeyoung, Jimenez-Morales, David, Newton, Billy W., Johnson, Jeffrey R., Krogan, Nevan J., Swaney, Danielle L., Mahley, Robert W. · 2019 · Journal of Alzheimer's Disease
60. A Comparative Review of microRNA Expression Patterns in Autism Spectrum Disorder
    Hicks, Steven D., Middleton, Frank A. · 2016 · Frontiers in Psychiatry
61. ESRP2 controls an adult splicing programme in hepatocytes to support postnatal liver maturation
    Bhate, Amruta, Parker, Darren J., Bebee, Thomas W., Ahn, Jaegyoon, Arif, Waqar, Rashan, Edrees H., Chorghade, Sandip, Chau, Anthony, Lee, Jae-Hyung, Anakk, Sayeepriyadarshini et al. · 2015 · Nature Communications
62. Identification of potential blood biomarkers for early diagnosis of Alzheimer’s disease through RNA sequencing analysis
    Shigemizu, Daichi, Mori, Taiki, Akiyama, Shintaro, Higaki, Sayuri, Watanabe, Hiroshi, Sakurai, Takashi, Niida, Shumpei, Ozaki, Kouichi · 2020 · Alzheimer's Research & Therapy
63. Single-cell joint detection of chromatin occupancy and transcriptome enables higher-dimensional epigenomic reconstructions
    Xiong, Haiqing, Luo, Yingjie, Wang, Qianhao, Yu, Xianhong, He, Aibin · 2021 · Nature Methods
64. Bhlhe40 and Bhlhe41 Transcription Factors Regulate Alveolar Macrophage Self‐renewal and Identity
    Rauschmeier, René, Gustafsson, Charlotte, Reinhardt, Annika, A‐Gonzalez, Noelia, Tortola, Luigi, Cansever, Dilay, Subramanian, Sethuraman, Taneja, Reshma, Rossner, Moritz J, Sieweke, Michael H et al. · 2019 · The EMBO Journal
65. Disrupting glutamine metabolic pathways to sensitize gemcitabine-resistant pancreatic cancer
    Chen, Ru, Lai, Lisa A, Sullivan, Yumi, Wong, Melissa, Wang, Lei, Riddell, Jonah, Jung, Linda, Pillarisetty, Venu G., Brentnall, Teresa A., Pan, Sheng · 2017 · Scientific Reports
66. An epigenome-wide association meta-analysis of prenatal maternal stress in neonates: A model approach for replication
    Rijlaarsdam, Jolien, Pappa, Irene, Walton, Esther, Bakermans-Kranenburg, Marian J., Mileva-Seitz, Viara R., Rippe, Ralph C.A., Roza, Sabine J., Jaddoe, Vincent W.V., Verhulst, Frank C., Felix, Janine F. et al. · 2016 · Epigenetics
67. FABP5 controls macrophage alternative activation and allergic asthma by selectively programming long-chain unsaturated fatty acid metabolism
    Hou, Yangxiao, Wei, Dong, Zhang, Zhaoqi, Guo, Han, Li, Sihong, Zhang, Jiayu, Zhang, Peng, Zhang, Lianfeng, Zhao, Yong · 2022 · Cell Reports
68. Evaluation of large language models for discovery of gene set function
    Hu, Mengzhou, Alkhairy, Sahar, Lee, Ingoo, Pillich, Rudolf T., Fong, Dylan, Smith, Kevin, Bachelder, Robin, Ideker, Trey, Pratt, Dexter · 2025 · Nature Methods
69. Multi-omics Signature of Candida auris , an Emerging and Multidrug-Resistant Pathogen
    Zamith-Miranda, Daniel, Heyman, Heino M., Cleare, Levi G., Couvillion, Sneha P., Clair, Geremy C., Bredeweg, Erin L., Gacser, Attila, Nimrichter, Leonardo, Nakayasu, Ernesto S., Nosanchuk, Joshua D. · 2019 · mSystems
70. Candida auris : multi-omics signature of an emerging and multidrug-resistant pathogen
    Zamith-Miranda, Daniel, Heyman, Heino M., Cleare, Levi G., Couvillion, Sneha, Clair, Geremy, Bredeweg, Erin, Gacser, Attila, Nimrichter, Leonardo, Nakayasu, Ernesto S., Nosanchuk, Joshua D. · 2019
71. Regulation of constitutive and alternative mRNA splicing across the human transcriptome by PRPF8 is determined by 5′ splice site strength
    Wickramasinghe, Vihandha O., Gonzàlez-Porta, Mar, Perera, David, Bartolozzi, Arthur R., Sibley, Christopher R., Hallegger, Martina, Ule, Jernej, Marioni, John C., Venkitaraman, Ashok R. · 2015 · Genome Biology
72. Detecting heterogeneity in single-cell RNA-Seq data by non-negative matrix factorization
    Zhu, Xun, Ching, Travers, Pan, Xinghua, Weissman, Sherman M., Garmire, Lana · 2017 · PeerJ
73. Temporally defined neocortical translation and polysome assembly are determined by the RNA-binding protein Hu antigen R
    Kraushar, Matthew L., Thompson, Kevin, Wijeratne, H. R. Sagara, Viljetic, Barbara, Sakers, Kristina, Marson, Justin W., Kontoyiannis, Dimitris L., Buyske, Steven, Hart, Ronald P., Rasin, Mladen-Roko · 2014 · Proceedings of the National Academy of Sciences
74. Additional Selection for Insecticide Resistance in Urban Malaria Vectors: DDT Resistance in Anopheles arabiensis from Bobo-Dioulasso, Burkina Faso
    Jones, Christopher M., Toé, Hyacinthe K., Sanou, Antoine, Namountougou, Moussa, Hughes, Angela, Diabaté, Abdoulaye, Dabiré, Roch, Simard, Frederic, Ranson, Hilary · 2012 · PLoS ONE
75. Molecular and functional signatures in a novel Alzheimer’s disease mouse model assessed by quantitative proteomics
    Kim, Dong Kyu, Park, Joonho, Han, Dohyun, Yang, Jinhee, Kim, Ahbin, Woo, Jongmin, Kim, Youngsoo, Mook-Jung, Inhee · 2018 · Molecular Neurodegeneration
76. HSV-1-induced disruption of transcription termination resembles a cellular stress response but selectively increases chromatin accessibility downstream of genes
    Hennig, Thomas, Michalski, Marco, Rutkowski, Andrzej J., Djakovic, Lara, Whisnant, Adam W., Friedl, Marie-Sophie, Jha, Bhaskar Anand, Baptista, Marisa A. P., L’Hernault, Anne, Erhard, Florian et al. · 2018 · PLOS Pathogens
77. Histone/protein deacetylase 11 targeting promotes Foxp3+ Treg function
    Huang, Jianbing, Wang, Liqing, Dahiya, Satinder, Beier, Ulf H., Han, Rongxiang, Samanta, Arabinda, Bergman, Joel, Sotomayor, Eduardo M., Seto, Edward, Kozikowski, Alan P. et al. · 2017 · Scientific Reports
78. Systematic Identification of the HSP90 Regulated Proteome
    Wu, Zhixiang, Moghaddas Gholami, Amin, Kuster, Bernhard · 2012 · Molecular & Cellular Proteomics
79. Alterations of microRNA-124 expression in peripheral blood mononuclear cells in pre- and post-treatment patients with major depressive disorder
    He, Shen, Liu, Xiaohua, Jiang, Kaida, Peng, Daihui, Hong, Wu, Fang, Yiru, Qian, Yiping, Yu, Shunying, Li, Huafang · 2016 · Journal of Psychiatric Research
80. Spatially distinct and metabolically active membrane domain in mycobacteria
    Hayashi, Jennifer M., Luo, Chu-Yuan, Mayfield, Jacob A., Hsu, Tsungda, Fukuda, Takeshi, Walfield, Andrew L., Giffen, Samantha R., Leszyk, John D., Baer, Christina E., Bennion, Owen T. et al. · 2016 · Proceedings of the National Academy of Sciences
81. Integrated network pharmacology and metabolomics to dissect the combination mechanisms of Bupleurum chinense DC-Paeonia lactiflora Pall herb pair for treating depression.
    Li, Xiao, Qin, Xue-Mei, Tian, Jun-Sheng, Gao, Xiao-Xia, Du, Guan-Hua, Zhou, Yu-Zhi · 2021 · Journal of Ethnopharmacology
82. Cerebrospinal fluid proteomics implicates the granin family in Parkinson’s disease
    Rotunno, Melissa S., Lane, Monica, Zhang, Wenfei, Wolf, Pavlina, Oliva, Petra, Viel, Catherine, Wills, Anne-Marie, Alcalay, Roy N., Scherzer, Clemens R., Shihabuddin, Lamya S. et al. · 2020 · Scientific Reports
83. Extensive accumulation of misfolded protein aggregates during natural aging and senescence
    Cuanalo-Contreras, Karina, Schulz, Jonathan, Mukherjee, Abhisek, Park, Kyung-Won, Armijo, Enrique, Soto, Claudio · 2023 · Frontiers in Aging Neuroscience
84. PU.1 enforces quiescence and limits hematopoietic stem cell expansion during inflammatory stress
    Chavez, James S., Rabe, Jennifer L., Loeffler, Dirk, Higa, Kelly C., Hernandez, Giovanny, Mills, Taylor S., Ahmed, Nouraiz, Gessner, Rachel L., Ke, Zhonghe, Idler, Beau M. et al. · 2021 · Journal of Experimental Medicine
85. Genome-wide expression and methylation profiling in the aged rodent brain due to early-life Pb exposure and its relevance to aging
    Dosunmu, Remi, Alashwal, Hany, Zawia, Nasser H. · 2012 · Mechanisms of Ageing and Development
86. Protein phosphatase 2A enables expression of interleukin 17 (IL-17) through chromatin remodeling
    Apostolidis, Sokratis A., Rauen, Thomas, Hedrich, Christian M., Tsokos, George C., Crispín, José C. · 2013 · Journal of Biological Chemistry
87. Comparative proteomics reveals a significant bias toward alternative protein isoforms with conserved structure and function
    Ezkurdia, I., del Pozo, A., Frankish, A., Rodriguez, J. M., Harrow, J., Ashman, K., Valencia, A., Tress, M. L. · 2012 · Molecular Biology and Evolution
88. Skeletal muscle fibrosis in pancreatic Cancer patients with respect to survival
    Judge, Sarah M, Nosacka, Rachel L, Delitto, Daniel, Gerber, Michael H, Cameron, Miles E, Trevino, Jose G, Judge, Andrew R · 2018 · JNCI Cancer Spectrum
89. Cell culture-based profiling across mammals reveals DNA repair and metabolism as determinants of species longevity
    Ma, Siming, Upneja, Akhil, Galecki, Andrzej, Tsai, Yi-Miau, Burant, Charles F, Raskind, Sasha, Zhang, Quanwei, Zhang, Zhengdong D, Seluanov, Andrei, Gorbunova, Vera et al. · 2016 · eLife
90. Generation of Mouse and Human Organoid-Forming Intestinal Progenitor Cells by Direct Lineage Reprogramming
    Miura, Shizuka, Suzuki, Atsushi · 2017 · Cell Stem Cell
91. ARID1A Maintains Differentiation of Pancreatic Ductal Cells and Inhibits Development of Pancreatic Ductal Adenocarcinoma in Mice
    Kimura, Yoshito, Fukuda, Akihisa, Ogawa, Satoshi, Maruno, Takahisa, Takada, Yutaka, Tsuda, Motoyuki, Hiramatsu, Yukiko, Araki, Osamu, Nagao, Munemasa, Yoshikawa, Takaaki et al. · 2018 · Gastroenterology
92. Activation of protein phosphatase 2A tumor suppressor as potential treatment of pancreatic cancer
    Chien, Wenwen, Sun, Qiao-Yang, Lee, Kian Leong, Ding, Ling-Wen, Wuensche, Peer, Torres-Fernandez, Lucia A., Tan, Siew Zhuan, Tokatly, Itay, Zaiden, Norazean, Poellinger, Lorenz et al. · 2015 · Molecular Oncology
93. MicroRNA-26a-3p rescues depression-like behaviors in male rats via preventing hippocampal neuronal anomalies
    Li, Ye, Fan, Cuiqin, Wang, Liyan, Lan, Tian, Gao, Rui, Wang, Wenjing, Yu, Shu Yan · 2021 · Journal of Clinical Investigation
94. DNA methylation loci associated with atopy and high serum IgE: a genome-wide application of recursive Random Forest feature selection
    Everson, Todd M., Lyons, Genevieve, Zhang, Hongmei, Soto-Ramírez, Nelís, Lockett, Gabrielle A., Patil, Veeresh K., Merid, Simon K., Sӧderhӓll, Cilla, Melén, Erik, Holloway, John W. et al. · 2015 · Genome Medicine
95. Hair follicle stem cell cultures reveal self‐organizing plasticity of stem cells and their progeny
    Chacón‐Martínez, Carlos Andrés, Klose, Markus, Niemann, Catherin, Glauche, Ingmar, Wickström, Sara A · 2017 · The EMBO Journal
96. Advancing Top-down Analysis of the Human Proteome Using a Benchtop Quadrupole-Orbitrap Mass Spectrometer
    Fornelli, Luca, Durbin, Kenneth R., Fellers, Ryan T., Early, Bryan P., Greer, Joseph B., LeDuc, Richard D., Compton, Philip D., Kelleher, Neil L. · 2017 · Journal of Proteome Research
97. Modeling inducible human tissue neoplasia identifies an extracellular matrix interaction network involved in cancer progression
    Reuter, Jason A., Ortiz-Urda, Susana, Kretz, Markus, Garcia, John, Scholl, Florence A., Pasmooij, Anna M.G., Cassarino, David, Chang, Howard Y., Khavari, Paul A. · 2009 · Cancer Cell
98. Growth of the Developing Cerebral Cortex Is Controlled by MicroRNA-7 through the p53 Pathway
    Pollock, Andrew, Bian, Shan, Zhang, Chao, Chen, Zhengming, Sun, Tao · 2014 · Cell Reports
99. Systematic detection of functional proteoform groups from bottom-up proteomic datasets
    Bludau, Isabell, Frank, Max, Dörig, Christian, Cai, Yujia, Heusel, Moritz, Rosenberger, George, Picotti, Paola, Collins, Ben C., Röst, Hannes, Aebersold, Ruedi · 2021 · Nature Communications
100. An optimized quantitative proteomics method establishes the cell type‐resolved mouse brain secretome
     Tüshaus, Johanna, Müller, Stephan A, Kataka, Evans Sioma, Zaucha, Jan, Sebastian Monasor, Laura, Su, Minhui, Güner, Gökhan, Jocher, Georg, Tahirovic, Sabina, Frishman, Dmitrij et al. · 2020 · The EMBO Journal