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The genomic formation of First American ancestors in East and Northeast Asia

Ning, Chao, Fernandes, Daniel, Changmai, Piya, Flegontova, Olga, Yüncü, Eren, Maier, Robert, Altınışık, N. Ezgi, Kassian, Alexei S., Krause, Johannes, Lalueza-Fox, Carles, Manica, Andrea, Potter, Ben A., Robbeets, Martine, Sirak, Kendra, Siska, Veronika, Vajda, Edward J., Vyazov, Leonid A., Wang, Ke, Wang, Lixin, Wu, Xiyan, Xiao, Xiaoming, Zhang, Fan, Reich, David, Schiffels, Stephan, Pinhasi, Ron, Cui, Yinqiu, Flegontov, Pavel·2020

Abstract

Upward Sun River 1, an individual from a unique burial of the Denali tradition in Alaska (11500 calBP), is considered a type representative of Ancient Beringians who split from other First Americans 22000–18000 calBP in Beringia. Using a new admixture graph model-comparison approach resistant to overfitting, we show that Ancient Beringians do not form the deepest American lineage, but instead harbor ancestry from a lineage more closely related to northern North Americans than to southern North Americans. Ancient Beringians also harbor substantial admixture from a lineage that did not contribute to other Native Americans: Amur River Basin populations represented by a newly reported site in northeastern China. Relying on these results, we propose a new model for the genomic formation of First American ancestors in Asia. One Sentence Summary: Ancient Beringians do not form the deepest American lineage, but harbor admixture from Amur River Basin populations.

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  • This East Asian lineage is the primary ancestor (60-70%) of the Indigenous peoples of the Americas (arctic and non-arctic peoples).

    “It reflects early admixture with the Denisovans and is the primary ancestor (60–70%) of the Indigenous peoples of the Americas (arctic and non-arctic peoples) [61,71,72].”

    From Beringia and the peopling of the Western Hemisphere (2023) · cites this paper as [71]

  • This East Asian lineage reflects early admixture with the Denisovans.

    “It reflects early admixture with the Denisovans and is the primary ancestor (60–70%) of the Indigenous peoples of the Americas (arctic and non-arctic peoples) [61,71,72].”

    From Beringia and the peopling of the Western Hemisphere (2023) · cites this paper as [71]

  • The 'Ancient Beringians' were a later offshoot of the North American ANA population.

    “It now appears, however, that the ‘Ancient Beringians’ were a later offshoot of the North American ANA population [71].”

    From Beringia and the peopling of the Western Hemisphere (2023) · cites this paper as [71]

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Authors
Ning, C., Fernandes, D., Changmai, P., Flegontova, O., Yüncü, E., Maier, R., Altınışık, N. E., Kassian, A. S., Krause, J., Lalueza-Fox, C., Manica, A., Potter, B. A., Robbeets, M., Sirak, K., Siska, V., Vajda, E. J., Vyazov, L. A., Wang, K., Wang, L., Wu, X., Xiao, X., Zhang, F., Reich, D., Schiffels, S., Pinhasi, R., Cui, Y., & Flegontov, P.
Publisher
openRxiv
Published
2020-10-12
Cited by
19
References
25
Type
Preprint

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