Oligodendrocyte heterogeneity in the mouse juvenile and adult central nervous system
Open accessAbstract
One size does not fit all: Oligodendrocytes are best known for their ability to myelinate brain neurons, thus increasing the speed of signal transmission. Marques et al. surveyed oligodendrocytes of developing mice and found unexpected heterogeneity. Transcriptional analysis identified 12 populations, ranging from precursors to mature oligodendrocytes. Transcriptional profiles diverged as the oligodendrocytes matured, building distinct populations. One population was responsive to motor learning, and another, with a different transcriptome, traveled along blood vessels. Science , this issue p. 1326
AI snapshot
Written from the paper’s full text.
TL;DR
Single-cell RNA sequencing of 5,072 oligodendrocyte-lineage cells from ten mouse CNS regions revealed multiple transcriptionally distinct populations along a differentiation continuum, with mature subtypes varying by region. The study also identified a Pdgfra+ vascular/leptomeningeal population and an ITPR2+ oligodendrocyte population responsive to motor learning.
Key findings
- Across 5,072 cells from ten CNS regions, clustering resolved a continuum from Pdgfra+ OPCs through committed precursors and newly formed oligodendrocytes to six mature oligodendrocyte states; the abstract describes 12 populations while the main text describes 13 distinct cell populations.
- OPCs co-expressed Pdgfra and Cspg4, with about 10% co-expressing cell cycle genes; 16% of juvenile OPCs were cycling versus roughly 3% of adult OPCs. Committed precursors lacked Pdgfra/Cspg4 and expressed Neu4, Sox6, Bmp4, and Gpr17; newly formed oligodendrocytes expressed Tcf7l2 and Casr; myelin-forming cells expressed Mal, Mog, Plp1, Opalin, and Serinc5; mature cells expressed Klk6, Apod, Trf, and Pmp22.
- Mature oligodendrocyte subsets were region-enriched: MOL5 was broadly present, while subsets of MOL5 and MOL6 were mainly found in adult S1 cortex and corpus callosum. Regions were classified as immature, intermediate, or mature based on juvenile cell-type distributions.
- A second Pdgfra+ population, VLMCs, was distinct from OPCs, expressed Lum, pericyte markers Vtn and Tbx18, and basal lamina components, and localized to blood vessels and meninges. ITPR2+/SOX10+ cells increased about 50% in the corpus callosum after 2 days of complex wheel running versus non-runners; ITPR2+/SOX10+ percentages were 77±4% in CA1 and 48±7% in S1 cortex at P7, falling below 20% later, and 47±4% at P7 and 37±1% at P21 in corpus callosum, with 10–20% remaining at P90.
Methods
- Single-cell RNA-Seq was performed on 5,072 cells expressing oligodendrocyte-lineage markers from ten regions of the mouse juvenile and adult CNS, including sorting from Pdgfra-H2B-GFP and Pdgfra-Cre-RCE mice.
- Main analyses included biclustering, hierarchical clustering, t-SNE projection, pseudotime analysis, differential expression, and Gene Ontology enrichment; findings were validated with single-molecule fluorescence in situ hybridization, immunostaining, and lineage tracing.
- Motor learning was assessed using the complex wheel paradigm, comparing runners and non-runners after 2 days and counting ITPR2+/SOX10+ cells in the corpus callosum.
Limitations
- The paper does not state limitations explicitly. Evident limitations include the mouse-only juvenile/adult design, which may not translate to human development or disease, and sampling of ten CNS regions that may miss other populations.
- Evident: most mature oligodendrocyte subtype distinctions rely on transcriptomic clustering and marker expression, with functional roles for most subsets not directly tested; the complex wheel result is correlative and based on a short 2-day paradigm.
- Evident: the abstract and main text differ in population count (12 versus 13), and the described transcriptional continuum may make boundaries between discrete states uncertain.
Model-written summary. Check it against the paper before relying on it.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
15 of 23 cited sources checked · 5 supported · 1 flagged · accuracy not yet measured
- Findingcitation
COL1A1-/PDGFRA+ OPCs are distributed in the parenchyma, in close association but not overlapping with the vasculature.
“COL1A1-/PDGFRA+ OPCs were distributed in the parenchyma, in close association but not overlapping with the vasculature”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [18] Tsai HH Oligodendrocyte precursors migrate along vasculature in the developing nervous system Science 2016 351 379 384 26798014 PMC5472053 source
The paper reports that PDGFRα+ OPCs associate closely with vessels during migration and describes their dispersal into CNS parenchyma (Abstract; page not provided). It does not identify the OPCs as COL1A1− or establish that they do not overlap with the vasculature; many are described as having cell bodies directly on vessel walls. (LLM, conf=0.85)
Experimental — accuracy not yet measured
- Premisecitation
OPC cell division turnover in the juvenile cortex is 19 days.
“consistent with a cell division turnover of 19 days in the juvenile cortex (7).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites [7] Young KM Oligodendrocyte dynamics in the healthy adult CNS: evidence for myelin remodeling Neuron 2013 77 873 885 23473318 PMC3842597 source
- Premisecitation
The complex wheel paradigm requires active myelination.
“a process that requires active myelination (20).”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [20] McKenzie IA Motor skill learning requires active central myelination Science 2014 346 318 322 25324381 PMC6324726 source
- Interpretationcitation
Oligodendrocyte lineage cells contribute to learning already within the first 2 days.
“suggesting that oligodendrocyte lineage cells contribute to learning already within the first 2 days.”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [20] McKenzie IA Motor skill learning requires active central myelination Science 2014 346 318 322 25324381 PMC6324726 source
- Premisecitation
Non-proliferative Nkx2.2+ precursors with a profile consistent with these cells have been observed in lesions of multiple sclerosis patients.
“Non-proliferative Nkx2.2+ precursors with a profile consistent with these cells (Fig. S10) have been observed in lesions of multiple sclerosis patients (26).”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [26] Kuhlmann T Differentiation block of oligodendroglial progenitor cells as a cause for remyelination failure in chronic multiple sclerosis Brain 2008 131 1749 1758 18515322 source
The Discussion identifies strongly Nkx2.2-positive cells as progenitors in adult human CNS. The ‘In early multiple sclerosis lesions’ section reports Olig2-positive progenitors in lesions and finds that only rare Olig2-positive cells co-express the proliferation marker Ki67. The lesion and proliferation analyses focused on Olig2, however, so they do not directly establish that the non-proliferative cells observed in lesions were Nkx2.2-positive. (LLM, conf=0.87)
Experimental — accuracy not yet measured
- Findingown data
ITPR2 exhibits close to 100% overlap with SOX10 positive cells.
“exhibited close to 100% overlap with SOX10 positive cells”
Quote in the paperSubstantial claim - Findingown data
These tissues still maintained 10-20% ITPR2+ cells at adult stages (P90).
“These tissues still maintained 10-20% ITPR2+ cells at adult stages (P90”
Quote in the paperNot a substantial claim - Findingown data
Gpr17 expression decreases in NFOLs.
“While Gpr17 expression decreased in these cells”
Quote in the paperNot a substantial claim - Findingown data
A second Pdgfra+ population, distinct from OPCs, was found along vessels.
“A second Pdgfra+ population, distinct from OPCs, was found along vessels.”
Quote in the paperSubstantial claim - Findingown data
Twelve populations were identified, representing a continuum from Pdgfra+ OPCs to distinct mature oligodendrocytes.
“Twelve populations were identified, representing a continuum from Pdgfra+ oligodendrocyte precursors (OPCs) to distinct mature oligodendrocytes.”
Quote in the paperSubstantial claim - Findingown data
MFOL1-2 express Mal, Mog, Plp1, Opalin, Serinc5.
“Myelin-forming oligodendrocytes (MFOL1-2) expressed genes responsible for myelin formation (Mal, Mog, Plp1, Opalin and Serinc5”
Quote in the paperSubstantial claim - Findingown data
COPs express migration genes Tns3 and Fyn.
“while expressing genes involved in migration (Tns3 and Fyn)”
Quote in the paperNot a substantial claim - Findingown data
Thirteen distinct cell populations were identified.
“led to the identification of thirteen distinct cell populations.”
Quote in the paperSubstantial claim- Rests on an assumption: Transcriptional clusters identified by clustering analyses correspond to biologically distinct oligodendrocyte populations.
- Findingown data
COPs present lower levels of cell cycle markers than OPCs.
“They presented lower levels of cell cycle markers”
Quote in the paperSubstantial claim - Findingown data
OPCs co-express Pdgfra and Cspg4.
“OPCs co-expressed Pdgfra and Cspg4”
Quote in the paperSubstantial claim - Findingown data
Tcf7l2 expression peaks in NFOLs.
“Tcf7l2, involved in oligodendrocyte differentiation (15), peaked”
Quote in the paperNot a substantial claim - Findingown data
These populations exhibit unique expression of Tcf7l2, Itpr2, Tmem2 and Pdgfa.
“These populations exhibited unique expression of Tcf7l2, Itpr2, Tmem2 and Pdgfa”
Quote in the paperSubstantial claim - Findingown data
VLMCs express laminins and collagens characteristic of basal lamina.
“and laminins and collagens characteristic of the basal lamina.”
Quote in the paperNot a substantial claim - Findingown data
ITPR2 is more specific to oligodendrocytes than TCF7L2.
“ITPR2, encoding an intracellular Ca2+ channel, was more specific to oligodendrocytes than TCF7L2”
Quote in the paperNot a substantial claim - Findingown data
NFOL1-2 present genes involved in steroid biosynthesis, ensheathment of neurons and cell projection organization.
“newly-formed oligodendrocytes (1-2) already presented genes involved in steroid biosynthesis, ensheathment of neurons and cell projection organization”
Quote in the paperSubstantial claim - Findingown data
Pdgfra+/Sox10- VLMCs are localized on blood vessels and meninges.
“Pdgfra+/Sox10- VLMCs were localized on blood vessels (Fig. 2D, S4 and S11A-B) and meninges”
Quote in the paperSubstantial claim - Findingcitation
Several genes identified in OPCs were previously associated with astrocytes/radial glia.
“Several genes identified in OPCs were previously associated with astrocytes/radial glia (6) (Fabp7 and Tmem100”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [6] Zeisel A Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq Science 2015 347 1138 1142 25700174 source
- Findingown data
VLMCs specifically express Lum.
“specifically expressed Lum”
Quote in the paperSubstantial claim - Findingown data
VLMCs express pericyte lineage markers Vtn and Tbx18.
“markers of the pericyte lineage (Vtn, Tbx18”
Quote in the paperSubstantial claim - Findingown data
The percentage of ITPR2+/Sox10+ cells in corpus callosum remained within the same range at P7 (47±4%) and P21 (37±1%).
“The percentage of ITPR2+/Sox10+ cells in the corpus callosum remained within the same range at P7 (47±4%) and P21 (37±1%”
Quote in the paperNot a substantial claim - Findingown data
Subsets of mature oligodendrocytes were enriched in specific regions in the adult brain.
“whereas subsets of mature oligodendrocytes were enriched in specific regions in the adult brain.”
Quote in the paperSubstantial claim - Findingown data
Newly-formed oligodendrocytes are responsive to complex motor learning.
“and responsive to complex motor learning.”
Quote in the paperSubstantial claim - Findingown data
10% of OPCs co-express cell cycle genes.
“10% co-expressed cell cycle genes”
Quote in the paperNot a substantial claim - Findingown data
Newly-formed oligodendrocytes are resident in the adult CNS.
“Newly-formed oligodendrocytes were found to be resident in the adult CNS”
Quote in the paperSubstantial claim - Findingown data
VLMCs exhibit low levels of Cspg4.
“These cells exhibited low levels of Cspg4 (NG2)”
Quote in the paperSubstantial claim - Findingown data
ITPR2+ cells are the progeny of OPCs.
“lineage tracing confirmed that ITPR2+ cells are the progeny of OPCs”
Quote in the paperSubstantial claim - Findingown data
ITPR2 immunoreactive cells are distinct from PDGFRA+ OPCs.
“ITPR2 immunoreactive cells were distinct from PDGFRA+ OPCs”
Quote in the paperSubstantial claim - Findingown data
Initial stages of oligodendrocyte differentiation were similar across the juvenile CNS.
“Initial stages of differentiation were similar across the juvenile CNS”
- Also stated in: § Abstract · plain
“Initial differentiation was uniform throughout the CNS”
Quote in the paperSubstantial claim - Also stated in: § Abstract · plain
- Findingown data
The number of ITPR2+/SOX10+ cells was increased ~50% in mice that ran on the complex wheel for 2 days, relative to non-runners.
“We found that the number of ITPR2+/SOX10+ was increased ~50% in mice that ran on the complex wheel for 2 days, relative to non-runners”
Quote in the paperSubstantial claim - Findingown data
COPs and NFOLs were present in all regions in juvenile mice.
“differentiation-committed oligodendrocyte precursors and newly-formed oligodendrocytes were present in all regions in juvenile mice”
Quote in the paperSubstantial claim - Findingown data
Different regions of the CNS were populated by diverse mature oligodendrocytes.
“Different regions of the CNS were populated by diverse mature oligodendrocytes”
Quote in the paperSubstantial claim - Findingown data
GO analysis indicated a divergence already at the stage of myelin formation.
“GO analysis indicated a divergence already at the stage of myelin formation”
Quote in the paperSubstantial claim - Findingown data
MOL1-4 are enriched in lipid biosynthesis and myelination genes (Far1 and Pmp22).
“segregation of MOL1-4, enriched in lipid biosynthesis and myelination genes (Far1 and Pmp22)”
Quote in the paperSubstantial claim - Findingown data
Subsets of MOL5 and MOL6 were mainly present in S1 cortex and corpus callosum in adult mice.
“Subsets of MOL5 and MOL6, were mainly present in S1 cortex and corpus callosum in the adult mice”
Quote in the paperSubstantial claim - Findingown data
MOL5-6 (adult) are enriched for synapse parts such as Grm3 and Jph4.
“from MOL5-6 (adult), enriched for synapse parts such as Grm3 (metabotropic glutamate receptor, mainly enriched in MOL6) and Jph4.”
Quote in the paperSubstantial claim - Findingown data
We were unable to identify region- or age-specific subpopulations of OPCs in our dataset.
“We were unable to identify region- or age- (juvenile versus adult) specific subpopulations of OPCs in our dataset”
Quote in the paperSubstantial claim - Findingown data
Regions can be classified as immature (anterior regions such as amygdala and hippocampus), intermediate (corpus callosum, zona incerta, striatum and hypothalamus) and mature (cortex and posterior regions such as dorsal horn and SN-VTA) based on distribution of cell types in juvenile mice.
“we classified regions as immature (anterior regions such as amygdala and hippocampus), intermediate (corpus callosum, zona incerta, striatum and hypothalamus) and mature (cortex and posterior regions such as dorsal horn and SN-VTA)”
Quote in the paperSubstantial claim- Rests on an assumption: The classification of regions as immature, intermediate or mature based on cell type distribution reflects developmental maturation.
- Interpretationcitation
The distribution of ITPR2+ oligodendrocytes correlates with active and prolonged differentiation in the juvenile rat corpus callosum.
“This distribution of ITPR2+ oligodendrocytes correlates with active and prolonged differentiation in the juvenile rat corpus callosum (19).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [19] Hamano K A quantitative study of the progress of myelination in the rat central nervous system, using the immunohistochemical method for proteolipid protein Brain Res Dev Brain Res 1998 108 287 293 9693804 source
- Interpretationown data
VLMCs were most likely previously assigned to OPCs due to co-purification.
“most likely previously assigned to OPCs due to co-purification.”
Quote in the paperSubstantial claim - Interpretationown data
Oligodendrocyte differentiation and maturation are uncoupled at a transcriptional level.
“Our study reveals the dynamics of oligodendrocyte differentiation and maturation, uncoupling them at a transcriptional level”
Quote in the paperSubstantial claim - Interpretationown data
Oligodendrocytes are a transcriptionally heterogeneous cell lineage in the CNS.
“highlighting oligodendrocyte heterogeneity in the CNS.”
- Also stated in: § Abstract · plain
“by establishing oligodendrocytes as a transcriptionally heterogeneous cell lineage”
Quote in the paperSubstantial claim - Also stated in: § Abstract · plain
- Interpretationown data
Novel motor activity might trigger rapid differentiation of OPCs into ITPR2+ committed precursors/newly-formed oligodendrocytes that contribute to early learning by facilitating electrical transmission.
“Thus, novel motor activity might trigger rapid differentiation of OPCs into ITPR2+ committed precursors/newly-formed oligodendrocytes that contribute to early learning by facilitating electrical transmission”
Quote in the paperSubstantial claim- Rests on an assumption: The increase in ITPR2+/SOX10+ cells after complex wheel running reflects differentiation of OPCs into ITPR2+ cells rather than other sources.
- Interpretationown data
ITPR2+ oligodendrocytes are involved in rapid myelination in complex motor learning.
“Our data also indicate that ITPR2+ oligodendrocytes are involved in rapid myelination in complex motor learning”
Quote in the paperSubstantial claim- Rests on an assumption: The increase in ITPR2+/SOX10+ cells after complex wheel running reflects differentiation of OPCs into ITPR2+ cells rather than other sources.
- Interpretationreasoning
Communication of mature oligodendrocytes with neighbouring neurons might be mediated through specific receptors and channels, following synaptic input or vesicular release.
“Thus, the communication of mature oligodendrocytes with neighbouring neurons might be mediated through specific receptors and channels, following synaptic input or vesicular release.”
Quote in the paperNot a substantial claim - Interpretationreasoning
Each brain region appears to optimize its circuitry by representation of unique proportions and combinations of mature oligodendrocytes.
“Each brain region appears to optimize its circuitry by representation of unique proportions and combinations of mature oligodendrocytes.”
Quote in the paperSubstantial claim - Interpretationown data
Even within MOL1-4, specific populations, such as MOL3, are more likely to be involved in synaptic activity.
“Even within MOL1-4, enriched in myelin-related genes, specific populations, such as MOL3, are more likely to be involved in synaptic activity”
Quote in the paperSubstantial claim - Interpretationown data
Single cells display combinations of glutamate receptor subunits that might determine function.
“with single cells displaying combinations of subunits that might determine function.”
Quote in the paperSubstantial claim - Interpretationown data
There is a common trajectory of differentiation between different regions.
“revealing a common trajectory of differentiation between the different regions”
Quote in the paperSubstantial claim - Interpretationcitation
Regional differences could result from different timing of oligodendrocyte maturation during post-natal development.
“These regional differences could result from different timing of oligodendrocyte maturation during post-natal development (21, 22).”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [21] Kinney HC Brody BA Kloman AS Gilles FH Sequence of central nervous system myelination in human infancy. II. Patterns of myelination in autopsied infants J Neuropathol Exp Neurol 1988 47 217 234 3367155 source
- cites [22] Brody BA Kinney HC Kloman AS Gilles FH Sequence of central nervous system myelination in human infancy. I. An autopsy study of myelination J Neuropathol Exp Neurol 1987 46 283 301 3559630 source
- May combine two claims. 20
- Classified as probably not a substantial claim. 3
- The quote only partly states this claim. 1
May combine two claims.
Findingown dataNFOL1-2 express Tcf7l2 and Casr.
“Newly-formed oligodendrocytes (NFOL1-2) expressed genes induced at early stages of differentiation (12–14) (Tcf7l2, Casr”
Quote in the paperSubstantial claim3 of 3 sources checked- cites [12] Cahoy JD A transcriptome database for astrocytes, neurons, and oligodendrocytes: a new resource for understanding brain development and function J Neurosci 2008 28 264 278 18171944 PMC6671143 source
The ‘Gene expression changes during astrocyte and oligodendrocyte development’ section discusses differentiation from OPCs to oligodendrocytes, but the passages found do not identify an NFOL1–2 population or report Tcf7l2 and Casr expression in it. Searches for both gene names and early oligodendrocyte differentiation found no passage establishing the attributed claim. (LLM, conf=0.73)
Experimental — accuracy not yet measured - cites [13] Swiss VA Identification of a gene regulatory network necessary for the initiation of oligodendrocyte differentiation PLoS One 2011 6 e18088 21490970 PMC3072388 source
The Discussion (page unavailable) says Tcf7l2 must be down-regulated during early oligodendrocyte differentiation, contrary to the citing sentence’s description of it as induced at that stage. Our copy does not address Casr or expression in the NFOL1–2 subgroups. (LLM, conf=0.82)
Checked by a reasoning model — may be wrong.
Experimental — accuracy not yet measured - cites [14] Zhang Y An RNA-sequencing transcriptome and splicing database of glia, neurons, and vascular cells of the cerebral cortex J Neurosci 2014 34 11929 11947 25186741 PMC4152602 source
The Additional information (Table 2; page unavailable) lists Casr among cell-type-enriched receptors, and the paper profiles newly formed oligodendrocytes (NFOs). The passages do not establish that Casr is expressed specifically by NFOL1-2, and a search for Tcf7l2 found no supporting passage. The paper uses NFO rather than the NFOL1-2 classification. (LLM, conf=0.72)
Experimental — accuracy not yet measured
May combine two claims.
Findingown dataMOL1-6 express Klk6, Apod, Trf, Pmp22.
“Mature oligodendrocytes (MOL1-6) expressed late oligodendrocyte differentiation genes (12) (Klk6, Apod) and genes present in myelinating cells (Trf and Pmp22)”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [12] Cahoy JD A transcriptome database for astrocytes, neurons, and oligodendrocytes: a new resource for understanding brain development and function J Neurosci 2008 28 264 278 18171944 PMC6671143 source
The Additional information gene list includes Apod and Trf, and the Analysis of genes expressed by oligodendrocytes section identifies Trf as an established oligodendrocyte gene (pages unavailable). Our copy does not identify MOL1–6 or establish their expression of Klk6 and Pmp22, so it supports only part of the attributed claim. (LLM, conf=0.86)
Experimental — accuracy not yet measured
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationTcf7l2 is involved in oligodendrocyte differentiation.
“Tcf7l2, involved in oligodendrocyte differentiation (15)”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites [15] Ye F HDAC1 and HDAC2 regulate oligodendrocyte differentiation by disrupting the beta-catenin-TCF interaction Nat Neurosci 2009 12 829 838 19503085 PMC2701973 source
Classified as probably not a substantial claim.
PremisecitationOligodendrocytes have been considered a functionally homogeneous population in the CNS.
“Oligodendrocytes have been considered as a functionally homogenous population in the central nervous system (CNS).”
- Also stated in: § Abstract · hedged
“While a largely homogeneous oligodendrocyte population is thought to execute these functions throughout the CNS (1)”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [1] Kessaris N Competing waves of oligodendrocytes in the forebrain and postnatal elimination of an embryonic lineage Nat Neurosci 2006 9 173 179 16388308 PMC6328015 source
The Introduction reports no evidence of functional heterogeneity among oligodendrocyte lineages in the forebrain, and the Discussion describes those populations as functionally equivalent. The claim extends that finding to oligodendrocytes throughout the CNS; the paper also notes that subtle functional differences remain possible. The supplied passages have section labels but no page numbers. (LLM, conf=0.84)
Experimental — accuracy not yet measured
- Also stated in: § Abstract · hedged
May combine two claims.
FindingcitationCOPs express Neu4 and genes involved in keeping oligodendrocytes undifferentiated (Sox6, Bmp4, Gpr17).
“expressed Neu4 and genes involved in keeping oligodendrocytes undifferentiated (Sox6, Bmp4 and Gpr17) (9–11)”
Quote in the paperSubstantial claim2 of 3 sources checked- cites [9] Stolt CC SoxD proteins influence multiple stages of oligodendrocyte development and modulate SoxE protein function Dev Cell 2006 11 697 709 17084361 source
- cites [10] Samanta J Kessler JA Interactions between ID and OLIG proteins mediate the inhibitory effects of BMP4 on oligodendroglial differentiation Development 2004 131 4131 4142 15280210 source
The BMP4-inhibition results (Fig. 1; page unavailable in our copy) show that BMP4 treatment reduced oligodendrocyte-lineage cells, supporting BMP4’s inhibitory role. The paper does not establish that COPs express Neu4, Sox6, BMP4, or Gpr17, or address the roles of the other listed genes. (LLM, conf=0.86)
Experimental — accuracy not yet measured - cites [11] Chen Y The oligodendrocyte-specific G protein-coupled receptor GPR17 is a cell-intrinsic timer of myelination Nat Neurosci 2009 12 1398 1406 19838178 PMC2783566 source
May combine two claims.
PremisecitationIncreased motor skills were apparent after 2 days in wild type mice, but not in mutant mice unable to synthesize new myelin.
“increased motor skills were already apparent after 2 days in wild type mice, but not in mutant mice that were unable to synthesize new myelin (20)”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [20] McKenzie IA Motor skill learning requires active central myelination Science 2014 346 318 322 25324381 PMC6324726 source
In “Active myelination is required for motor skill learning” (page unavailable), the paper reports that Myrf-mutant mice performed worse than their control littermates on the complex wheel. It does not establish the claimed two-day milestone, and it says both groups improved during the first week—not that the mutants showed no improvement. The controls were Myrf(+/−) littermates, rather than wild-type mice. (LLM, conf=0.88)
Experimental — accuracy not yet measured
May combine two claims.
PremisecitationIn the complex wheel paradigm, running leads to an increase in proliferating OPCs after 4 days, followed by an increase in oligodendrocytes after 8 days.
“running on the wheel leads to an increase in the number of proliferating OPCs after 4 days, followed by an increase in oligodendrocytes after 8 days (20).”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [20] McKenzie IA Motor skill learning requires active central myelination Science 2014 346 318 322 25324381 PMC6324726 source
In “Running stimulates OP proliferation and OL production” (page unavailable), the paper reports an increased fraction of EdU-labeled OPCs after 4 days on the complex wheel, consistent with increased proliferation. It reports an increase in the absolute number of OPCs at 6 days and in oligodendrocyte-lineage cells at 11 days, not an increase in oligodendrocytes at 8 days. (LLM, conf=0.90)
Experimental — accuracy not yet measured
May combine two claims.
Findingown data77±4% and 48±7% of SOX10+ oligodendrocytes were ITPR2+ at P7 in CA1 hippocampus and S1 cortex, respectively, and decreased to less than 20% thereafter.
“77±4% and 48±7% of SOX10+ oligodendrocytes were ITPR2+ at P7 in the CA1 hippocampus and S1 cortex, respectively, and decreased to less than 20% thereafter”
Quote in the paperSubstantial claimThe quote only partly states this claim.
Findingown dataCOPs are enriched in cell fate commitment and adhesion genes.
“Differentiation-committed oligodendrocyte precursors were enriched in cell fate commitment and adhesion genes”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataCOPs are distinct from OPCs, lacking Pdgfra and Cspg4.
“Differentiation-committed oligodendrocyte precursors (COPs) were distinct from OPCs (lacking Pdgfra and Cspg4)”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataAt P21, 22±2% of OPC-derived Pdgfra-H2B-GFP+ cells in S1 cortex, 25±1.5% in CA1 hippocampus, and 43±3.7% in corpus callosum were ITPR2+.
“22±2% and 25±1.5% of the OPC-derived Pdgfra-H2B-GFP+ cells were ITPR2+ in the somatosensory (S1) cortex and CA1 hippocampus at P21 respectively, while 43±3.7% double positive cells were found in the corpus callosum”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataVLMCs are a second Pdgfra+ population distinct from OPCs and segregated from all oligodendrocyte lineage cells.
“We identified a second Pdgfra+ population, vascular and leptomeningeal cells (VLMCs), distinct from OPCs and segregated from all oligodendrocyte lineage cells”
Quote in the paperSubstantial claimMay combine two claims.
Findingown data16% of juvenile OPCs were in the cell cycle, compared to ~3% of adult OPCs.
“16% of the juvenile OPCs were in the cell cycle (as determined by the simultaneous expression of more than 2 cell cycle markers, Fig. S2F), compared to ~3% of the adult OPCs.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataPotassium channels and TRPs were expressed in a cell type-specific manner, displaying a scattered distribution within populations.
“Potassium channels and TRPs were also expressed in a cell type-specific manner, displaying a scattered distribution within populations”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataSome populations, such as MOL5, were present throughout the regions, while other MOLs were enriched in certain regions.
“While some populations, such as MOL5, were present throughout the regions, other MOLs where enriched in certain regions”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataCOPs and NFOLs were observed in adult corpus callosum and S1 cortex, albeit in considerably lower numbers compared to juvenile mice.
“These populations were also observed in the adult corpus callosum and S1 cortex, albeit in considerably lower numbers compared to juvenile mice”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataMost glutamate receptor subunits were expressed throughout oligodendrocyte lineage cells, but there was preferential expression in some populations.
“Although most glutamate receptor subunits were expressed throughout oligodendrocyte lineage cells, there was preferential expression in some populations”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataGRM3 is present in the oligodendrocyte lineage and specifically in CC1+ mature oligodendrocytes in the juvenile cortex.
“We confirmed the presence of GRM3 in the oligodendrocyte lineage (Pdgfra-Cre-RCE) and specifically in CC1+ mature oligodendrocytes in the juvenile cortex”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataMature oligodendrocyte subtype specification occurred later at postnatal stages and in a region-specific manner.
“mature oligodendrocyte subtype specification occurred later at postnatal stages and in a region specific manner.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationOligodendrocytes were originally described as morphologically heterogeneous.
“these cells were originally described as morphologically heterogeneous (2).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [2] Rio-Hortega Pd Tercera aportacion al conocimiento morfologico e interpretacion funcional de la oligodendroglia Mem Real Soc Espan Hist Nat 1928 14 40 122
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
May combine two claims.
InterpretationreasoningFinal maturation of oligodendrocytes might already be achieved in juvenile mice in certain regions, such as dorsal horn, but only in adulthood in others, such as corpus callosum.
“final maturation of oligodendrocyte might already be achieved in the juvenile mice in certain regions, such as the dorsal horn, but only in adulthood in others, such as the corpus callosum.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationIn the rat, myelination first starts in posterior regions (dorsal horn) around P7, while in anterior regions of the CNS (amygdala, hippocampus, striatum and cortex) it occurs between P21 and P28.
“myelination first starts in the rat in posterior regions (dorsal horn) around P7, while in anterior regions of the CNS (amygdala, hippocampus, striatum and cortex) it occurs between P21 and P28 (23).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [23] Coffey JC McDermott KW The regional distribution of myelin oligodendrocyte glycoprotein (MOG) in the developing rat CNS: an in vivo immunohistochemical study J Neurocytol 1997 26 149 161 9192283 source
May combine two claims.
PremisecitationOptic nerve oligodendrocytes can form axon-myelinic synapses, responding to axonal action potentials via glutamate ionotropic NMDA receptors.
“Optic nerve oligodendrocytes can form axon-myelinic synapses, responding to axonal action potentials via glutamate ionotropic NMDA receptors (24).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [24] Micu I The molecular physiology of the axo-myelinic synapse Exp Neurol 2016 276 41 50 26515690 source
May combine two claims.
Interpretationown dataThere is a transcriptional continuum between oligodendrocyte populations, with a subset representing distinct but connected stages in the maturation path from an OPC to mature oligodendrocytes.
“indicates a transcriptional continuum between oligodendrocyte populations, with a subset representing distinct but nevertheless connected stages in the maturation path from an OPC to mature oligodendrocytes”
Quote in the paperSubstantial claim
The paper relies on this without support.
Transcriptional clusters identified by clustering analyses correspond to biologically distinct oligodendrocyte populations.
“Biclustering analysis (6) (Fig. S1B and S15), hierarchical clustering (Fig. 1C) and differential expression analysis (Supporting File Supplementary Excel S1 and S2) led to the identification of thirteen distinct cell populations.”
The paper relies on this without support.
The sampled regions and cells are representative of the mouse CNS oligodendrocyte lineage.
“We analyzed 5072 transcriptomes of single cells expressing markers from the oligodendrocyte lineage, isolated from ten distinct regions of the anterior-posterior and dorsal-ventral axis of the mouse juvenile and adult CNS”
The paper relies on this without support.
The increase in ITPR2+/SOX10+ cells after complex wheel running reflects differentiation of OPCs into ITPR2+ cells rather than other sources.
“Thus, novel motor activity might trigger rapid differentiation of OPCs into ITPR2+ committed precursors/newly-formed oligodendrocytes that contribute to early learning by facilitating electrical transmission”
The paper relies on this without support.
The classification of regions as immature, intermediate or mature based on cell type distribution reflects developmental maturation.
“Based on the distribution of cell types in the juvenile mice, we classified regions as immature (anterior regions such as amygdala and hippocampus), intermediate (corpus callosum, zona incerta, striatum and hypothalamus) and mature (cortex and posterior regions such as dorsal horn and SN-VTA)”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Although the oligodendrocyte lineage clusters aligned well with those previously published, there was not a perfect correspondence, and subtype labels in this paper do not correspond exactly to those previously described.
“Note that although the oligodendrocyte lineage clusters aligned well with those previously published (Figure S1H; Marques et al., 2016), there was not a perfect correspondence, and subtype labels in this paper do not correspond exactly to those previously described.”
From Molecular Architecture of the Mouse Nervous System (2018) · cites this paper as Marques et al., 2016
Brain fibroblast-like cells are likely identical to the vascular leptomeningeal cells (VLMCs) previously described in the mouse CNS.
“Brain fibroblast-like cells are likely identical to the vascular leptomeningeal cells (VLMCs) that we previously described in the mouse CNS (Marques et al., 2016).”
From Molecular Architecture of the Mouse Nervous System (2018) · cites this paper as Marques et al., 2016
Oligodendrocytes wrap myelin sheets around axons to support long-range neurotransmission and were previously analyzed by scRNA-seq.
“Oligodendrocytes wrap myelin sheets around axons to support long-range neurotransmission and were previously analyzed by scRNA-seq (Marques et al., 2016).”
From Molecular Architecture of the Mouse Nervous System (2018) · cites this paper as Marques et al., 2016
Oligodendrocytes may modulate axon myelination in response to synaptic input, given their expression of glutamate receptor genes in mice and of excitatory synaptic proteins in zebrafish.
“Oligodendrocytes may modulate axon myelination in response to synaptic input, given their expression of glutamate receptor genes in mice 63 and of excitatory synaptic proteins in zebrafish. 64”
From Unique transcriptomic alterations in 5XFAD;PS19 mouse model identify glial lipid dysregulation and coordinated microglial–oligodendrocyte responses (2026) · cites this paper as [63]
Along the oligodendroglial lineage, myelinated mature oligodendrocytes exhibit enriched expression of MAG, MOBP, and OPALIN.
“Along the oligodendroglial lineage, myelinated mature oligodendrocytes exhibit enriched expression of MAG, MOBP, and OPALIN (21).”
From Single-nucleus transcriptome analysis reveals dysregulation of angiogenic endothelial cells and neuroprotective glia in Alzheimer’s disease (2020) · cites this paper as [21]
The BackSPIN algorithm has been extensively validated using computational and biological validation tools.
“The algorithm has by now been extensively validated using both computational (including comparisons to PCA, and independent-component analysis, tSNE, and GP-LVM) biological validation tools 9, 63–66.”
From Molecular interrogation of hypothalamic organization reveals distinct dopamine neuronal subtypes (2017) · cites this paper as [66]
sc/snRNA-seq provides insight into diversity of glial cells including oligodendrocyte lineage and functional states of microglia.
“sc/snRNA-seq also provides insight into the diversity of glial cells including the oligodendrocyte lineage (Marques et al., 2016) and functional states of microglia (Masuda et al., 2019).”
From Single-Cell Sequencing of Brain Cell Transcriptomes and Epigenomes (2021) · cites this paper as Marques et al., 2016
Differentiation trajectories of newborn neurons and oligodendrocytes in adults can also be reconstructed.
“Differentiation trajectories of newborn neurons and oligodendrocytes in adults can also be reconstructed (Habib et al., 2016; Marques et al., 2016).”
From Single-Cell Sequencing of Brain Cell Transcriptomes and Epigenomes (2021) · cites this paper as Marques et al., 2016
Continuous trajectories appear in brain development and in adult differentiating populations, including oligodendrocyte lineage cells and newborn dentate gyrus granule cells.
“Continuous trajectories occur during brain development (Nowakowski et al., 2017) and in differentiating cell populations in the adult, such as oligodendrocyte lineage cells (Marques et al., 2016) or newborn granule cells in the dentate gyrus of the hippocampus (Habib et al., 2016).”
From Single-Cell Sequencing of Brain Cell Transcriptomes and Epigenomes (2021) · cites this paper as Marques et al., 2016
Ptprz1 is a marker of oligodendrocyte precursor cells.
“such as Ptprz1, a marker of oligodendrocyte precursor cells38,39”
From Spatial epigenome–transcriptome co-profiling of mammalian tissues (2023) · cites this paper as [38]
These previously uncharacterized temporal modules comprised oligodendrocyte lineage progression TFs and co-expression partners.
“These previously uncharacterized temporal modules comprised oligodendrocyte lineage progression TFs (e.g., Kcnip3, Olig2, Sox2, and Klf9; Maki et al., 2013; Marques et al., 2016; Tokumoto et al., 2017; Wu et al., 2012) and co-expression partners (e.g., Hes5, Eno1, Sox21, Purb, Zfp275, Foxj2, Zeb2, Tsc22d3, and Hopx; Figure 4F).”
From Single-Cell Analysis of Regional Differences in Adult V-SVZ Neural Stem Cell Lineages (2019) · cites this paper as Marques et al., 2016
Force-directed visualization of the oligodendrocyte lineage k-nearest neighbors graph recapitulated the predicted lineage order previously reported from single-cell RNA-seq profiles of oligodendrocyte differentiation.
“We next generated a force-directed visualization of the oligodendrocyte lineage k-nearest neighbors graph to define their lineage order (Figure 4A), which recapitulated the predicted lineage order previously reported from single cell RNA (scRNA)-seq profiles of oligodendrocyte differentiation (Marques et al., 2016; Figure S2E).”
From Single-Cell Analysis of Regional Differences in Adult V-SVZ Neural Stem Cell Lineages (2019) · cites this paper as Marques et al., 2016
Aging-driven down-regulation of ribosomal genes had been widely accepted, mostly based on transcriptomic studies in yeast.
“It appears that aging-driven down-regulation of ribosomal genes had been widely accepted, mostly based on transcriptomic studies in yeast 56,57 .”
From Single-cell transcriptomic profiling of the aging mouse brain (2019) · cites this paper as [57]
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Scenic: single-cell regulatory network inference and clustering.
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“Note that this cancer trajectory represents a different “trajectory” compared to normal oligodendrocyte differentiation (Figure S14 for the SCENIC analysis of 5069 oligodendrocytes 58 ).”
BackgroundMolecular Architecture of the Mouse Nervous System
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Self-citationA molecular atlas of cell types and zonation in the brain vasculature
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Molecular diversity and specializations among the cells of the adult mouse brain
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“The first stage of analysis robustly grouped cells into 8–11 broad classes (Data S2), including neurons, astrocytes, microglia/macrophages, oligodendrocytes, polydendrocytes (oligodendrocyte progenitor cells), and components of the vasculature—endothelial cells, fibroblast-like cells, andmural cells (Abbott et al., 20…”
BackgroundConserved cell types with divergent features in human versus mouse cortex
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Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
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Single-cell transcriptional diversity is a hallmark of developmental potential
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Cell diversity and network dynamics in photosensitive human brain organoids
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“Cluster c9 (17,103 cells) contained progenitors of neuroepithelial origin, including cells with an oligodendrocyte-precursor-like identity 20,26 .”
BackgroundA high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain
Yao, Z., van Velthoven, C. T. J., Kunst, M., Zhang, M., McMillen, D., Lee, C., Jung, W., Goldy, J., Abdelhak, A., Aitken, M., et al. (2023) · Nature · doi:10.1038/s41586-023-06812-z · Cited by 1,194 · see citing works
Integrative single-cell analysis of transcriptional and epigenetic states in the human adult brain
Lake, B. B., Chen, S., Sos, B. C., Fan, J., Kaeser, G. E., Yung, Y. C., Duong, T. E., Gao, D., Chun, J., Kharchenko, P. V., et al. (2018) · Nature Biotechnology · doi:10.1038/nbt.4038 · Cited by 983 · see citing works
“Further, although snDrop-seq permits more wide-ranging tissue profiling compared to our previously published method 4 , we were unable to distinguish subpopulations of cortical astrocytes and oligodendrocytes found in mouse studies 56, 57 .”
Altered human oligodendrocyte heterogeneity in multiple sclerosis
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Self-citationA molecular census of arcuate hypothalamus and median eminence cell types
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“To compare oligodendrocyte clusters to maturational stages, we generated a heatmap showing single-cell expression of oligodendrocyte stage-specific marker genes identified by reference 9 .”
MethodMolecular diversity of midbrain development in mouse, human, and stem cells
La Manno, G., Gyllborg, D., Codeluppi, S., Nishimura, K., Salto, C., Zeisel, A., Borm, L. E., Stott, S. R. W., Toledo, E. M., Villaescusa, J. C., et al. (2016) · Cell · doi:10.1016/j.cell.2016.09.027 · Cited by 835 · see citing works
Self-citationSingle-cell transcriptomic profiling of the aging mouse brain
Ximerakis, M., Lipnick, S. L., Innes, B. T., Simmons, S. K., Adiconis, X., Dionne, D., Mayweather, B. A., Nguyen, L., Niziolek, Z., Ozek, C., et al. (2019) · Nature Neuroscience · doi:10.1038/s41593-019-0491-3 · Cited by 736 · see citing works
Single-nucleus chromatin accessibility and transcriptomic characterization of Alzheimer’s disease
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White matter changes in Alzheimer’s disease: A focus on myelin and oligodendrocytes
Nasrabady, S. E., Rizvi, B., Goldman, J. E., & Brickman, A. M. (2018) · Acta Neuropathologica Communications · doi:10.1186/s40478-018-0515-3 · Cited by 723 · see citing works
“These OPCs are located along vessels and they show similarities with pericyte lineage cells [51].”
Developmental and oncogenic programs in H3K27M gliomas dissected by single-cell RNA-seq
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Spatial organization of the somatosensory cortex revealed by osmFISH
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Functional diversity of astrocytes in neural circuit regulation
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“Importantly, the transcriptional dynamics of stage-specific genes along the developmental axis revealed in our study is highly similar to the other study (Marques et al., 2016) (Figure S3), thus validating our approach.”
BackgroundResultDisease-specific oligodendrocyte lineage cells arise in multiple sclerosis
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Myelin remodeling through experience-dependent oligodendrogenesis in the adult somatosensory cortex
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Molecular architecture of the developing mouse brain
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“Along the oligodendroglial lineage, myelinated mature oligodendrocytes exhibit enriched expression of MAG, MOBP, and OPALIN (21).”
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Brain Cell Type Specific Gene Expression and Co-expression Network Architectures
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What is a cell type and how to define it?
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Self-citationSingle-cell CUT&Tag profiles histone modifications and transcription factors in complex tissues
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Whole-organism clone tracing using single-cell sequencing
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Single-cell RNA sequencing of mouse brain and lung vascular and vessel-associated cell types
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Single-Cell Transcriptomics Meets Lineage Tracing
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Oligodendrocyte Progenitor Cells Become Regionally Diverse and Heterogeneous with Age
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Genetic mapping of cell type specificity for complex traits
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Motor learning promotes remyelination via new and surviving oligodendrocytes
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Myelin plasticity and nervous system function
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“…lineage in detail, Marques et al. Furthermore, they showed that based on their gene expression profile, during their final developmental stage mature OLs can be clustered into six additional subsets, indicating that also mature OLs eventually form a heterogeneous population (Marques et al., 2016).”
InfluentialSingle-cell RNA-seq reveals the transcriptional landscape in ischemic stroke
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Transcriptional Convergence of Oligodendrocyte Lineage Progenitors during Development
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Self-citationComprehensive cell atlas of the first-trimester developing human brain
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“Although oligodendrocytes have been described to be morphologically (52), regionally (53– 55) and transcriptionally (56, 57) diverse, heterogeneity among developing OPCs has not been consistently observed.”
BackgroundSelf-citationA connectomic study of a petascale fragment of human cerebral cortex
Shapson-Coe, A., Januszewski, M., Berger, D. R., Pope, A., Wu, Y., Blakely, T., Schalek, R. L., Li, P. H., Wang, S., Maitin-Shepard, J., et al. (2021) · doi:10.1101/2021.05.29.446289 · Cited by 243 · see citing works
BANKSY unifies cell typing and tissue domain segmentation for scalable spatial omics data analysis
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“The latter set and their top neighbors are associated with functional and signaling roles, such as maintenance of synapses and ion transport 43 .”
Remyelination therapies: a new direction and challenge in multiple sclerosis
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Single-Cell Sequencing of Brain Cell Transcriptomes and Epigenomes
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“Broader surveys have covered multiple regions in both the central and peripheral nervous systems of mouse (Marques et al., 2016; Saunders et al., 2018; Zeisel et al., 2018) with as many as 1.”
BackgroundInfluentialMolecular and anatomical organization of the dorsal raphe nucleus
Huang, K. W., Ochandarena, N. E., Philson, A. C., Hyun, M., Birnbaum, J. E., Cicconet, M., & Sabatini, B. L. (2019) · eLife · doi:10.7554/elife.46464 · Cited by 267 · see citing works
Mapping gene regulatory networks from single-cell omics data
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Molecular and cellular evolution of the primate dorsolateral prefrontal cortex
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“conserved gene expression cascades across the four primates and transcriptomically resembled that described in mice (21) (fig.”
BackgroundDiversity of Interneurons in the Dorsal Striatum Revealed by Single-Cell RNA Sequencing and PatchSeq
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Self-citationMyelin dynamics: protecting and shaping neuronal functions
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“As opposite to the rare NSCs, oligodendrocytes in the adult brain are widespread, but they display a high degree of regional heterogeneity (Marques et al., 2016).”
Wrapped to Adapt: Experience-Dependent Myelination
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Single-Cell Analysis of Regional Differences in Adult V-SVZ Neural Stem Cell Lineages
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“…uncharacterized temporal modules comprised oligodendrocyte lineage progression TFs (e.g., Kcnip3, Olig2, Sox2, and Klf9; Maki et al., 2013; Marques et al., 2016; Tokumoto et al., 2017; Wu et al., 2012) and co-expression partners (e.g., Hes5, Eno1, Sox21, Purb, Zfp275, Foxj2, Zeb2,…”
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“Recent single RNA sequencing transcriptome analyses confirm oligodendrocyte heterogeneity (35, 36).”
BackgroundMarisca, R., Hoche, T., Agirre, E., Hoodless, L. J., Barkey, W., Auer, F., Castelo‐Branco, G., & Czopka, T. (2020) · Nature Neuroscience · doi:10.1038/s41593-019-0581-2 · Cited by 246 · see citing works
Self-citationOligodendrocyte lineage cells and depression
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Origins and Proliferative States of Human Oligodendrocyte Precursor Cells
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“While fluorescence-activated cell sorting (FACS) of labeled transgenic mouse OPCs (e.g., PDGFRA-H2B-GFP) has been used for scRNA-seq (Marques et al., 2016, 2018), we purified human embryonic OPCs by immunopanning (Dugas and Emery, 2013; Barres, 2014) (Figure 1A).”
BackgroundMethodWatanabe, K., Jansen, P. R., Savage, J. E., Nandakumar, P., Wang, X., Agee, M., Aslibekyan, S. W., Auton, A., Bell, R. K., Bryc, K., et al. (2022) · Nature Genetics · doi:10.1038/s41588-022-01124-w · Cited by 234 · see citing works
Single-cell spatial transcriptome reveals cell-type organization in the macaque cortex
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“For OPC andOLG cell types, we performed pseudo-time analysis of snRNA-seq data and found a lineage trajectory from OPCs to mature OLGs (Figures S6F–S6H), consistent with previous reports in mouse and human.(35,45) Furthermore, stereo-seq data showed that OLGs were enriched in L6, whereas OPCs (highly expressing PDGFRA…”
ResultSelf-citationDisease-associated oligodendrocyte responses across neurodegenerative diseases
Pandey, S., Shen, K., Lee, S.-H., Shen, Y.-A. A., Wang, Y., Otero-García, M., Kotova, N., Vito, S. T., Laufer, B. I., Newton, D. F., et al. (2022) · Cell Reports · doi:10.1016/j.celrep.2022.111189 · Cited by 227 · see citing works
CD8+ T cells induce interferon-responsive oligodendrocytes and microglia in white matter aging
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“Oligodendrocytes were separated into four different subclusters, of which the most abundant two clusters represent the heterogeneity of oligodendrocytes previously identified in juvenile and adult mouse by Marques et al.26.”
BackgroundOn Myelinated Axon Plasticity and Neuronal Circuit Formation and Function
Almeida, R. G., & Lyons, D. A. (2017) · The Journal of Neuroscience · doi:10.1523/jneurosci.3185-16.2017 · Cited by 221 · see citing works
“which will be important to consider from the point of view of circuit formation and function in future studies (Butt et al., 2005; Káradóttir et al., 2008; Nishiyama et al., 2009; Viganò et al., 2013; Bechler et al., 2015; Marques et al., 2016).”
BackgroundCell fixation and preservation for droplet-based single-cell transcriptomics
Alles, J., Karaiskos, N., Praktiknjo, S. D., Grosswendt, S., Wahle, P., Ruffault, P.-L., Ayoub, S., Schreyer, L., Boltengagen, A., Birchmeier, C., et al. (2017) · BMC Biology · doi:10.1186/s12915-017-0383-5 · Cited by 218 · see citing works
Cell-type specialization is encoded by specific chromatin topologies
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Self-citationThe Dimensions, Dynamics, and Relevance of the Mammalian Noncoding Transcriptome
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“Partnering single-cell RNA-Seq with modern histology and microscopy provides powerful insight into the physical and transcriptomic architecture of complex tissues [116,117].”
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Glucose metabolic crosstalk and regulation in brain function and diseases
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Spatially resolved single-cell translatomics at molecular resolution
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“5F) (43), and by the spatial enrichment of the more mature OLG2 in fiber tracts for myelination-based axon ensheathment (Fig.”
BackgroundIntroduction to Single‐Cell RNA Sequencing
Olsen, T. K., & Baryawno, N. (2018) · Current Protocols in Molecular Biology · doi:10.1002/cpmb.57 · Cited by 192 · see citing works
“…specialized functions. scRNAseq has been used by several groups to identify and characterize neuronal subtypes in different regions of the murine central nervous system (La Manno et al., 2016; Marques et al., 2016; Poulin et al., 2016) and the human brain (Darmanis et al., 2015; Lake et al., 2016).”
BackgroundCellular communities reveal trajectories of brain ageing and Alzheimer’s disease
Green, G. S., Fujita, M., Yang, H.-S., Taga, M., Cain, A., McCabe, C., Comandante-Lou, N., White, C. C., Schmidtner, A. K., Zeng, L., et al. (2024) · Nature · doi:10.1038/s41586-024-07871-6 · Cited by 204 · see citing works
A Single-Cell Transcriptional Atlas of the Developing Murine Cerebellum
Carter, R. A., Bihannic, L., Rosencrance, C. D., Hadley, J. L., Tong, Y., Phoenix, T. N., Natarajan, S., Easton, J. B., Northcott, P. A., & Gawad, C. (2018) · Current Biology · doi:10.1016/j.cub.2018.07.062 · Cited by 190 · see citing works
“identified a series of distinct oligodendrocyte subtypes [24].”
Emerging roles for CNS fibroblasts in health, injury and disease
Dorrier, C., Jones, H. E., Pintarić, L., Siegenthaler, J. A., & Daneman, R. (2021) · Nature reviews. Neuroscience · doi:10.1038/s41583-021-00525-w · Cited by 194 · see citing works
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“Similarly, in the mouse brain, Marques et al. demonstrated that transcriptionally distinct OL subpopulations exist between the mouse juvenile and adult (P21-60) brain by single-cell RNA sequencing (Marques et al., 2016).”
BackgroundOxidative stress, prefrontal cortex hypomyelination and cognitive symptoms in schizophrenia
Maas, D. A., Vallès, A., & Martens, G. J. M. (2017) · Translational Psychiatry · doi:10.1038/tp.2017.138 · Cited by 181 · see citing works
CNS myelination and remyelination depend on fatty acid synthesis by oligodendrocytes
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Microglia regulation of central nervous system myelin health and regeneration
Kent, S. A., & Miron, V. E. (2024) · Nature Reviews Immunology · doi:10.1038/s41577-023-00907-4 · Cited by 183 · see citing works
A comparative atlas of single-cell chromatin accessibility in the human brain
Li, Y. E., Preissl, S., Miller, M., Johnson, N. D., Wang, Z., Jiao, H., Zhu, C., Wang, Z., Xie, Y., Poirion, O., et al. (2023) · Science · doi:10.1126/science.adf7044 · Cited by 173 · see citing works
Self-citationA latent lineage potential in resident neural stem cells enables spinal cord repair
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“During developmental oligodendrogenesis, oligodendrocyte progenitors undergo a stepwise differentiation process that was recently characterized at the single-cell level (19).”
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- Authors
- Marques, S., Zeisel, A., Codeluppi, S., van Bruggen, D., Mendanha Falcão, A., Xiao, L., Li, H., Häring, M., Hochgerner, H., Romanov, R. A., Gyllborg, D., Muñoz-Manchado, A. B., La Manno, G., Lönnerberg, P., Floriddia, E. M., Rezayee, F., Ernfors, P., Arenas, E., Hjerling-Leffler, J., Harkany, T., Richardson, W. D., Linnarsson, S., & Castelo-Branco, G.
- Affiliations
- Karolinska Institutet (SE)
- Laboratory of Molecular Neurobiology, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, SE-17177 Stockholm, Sweden.
- Second Military Medical University (CN)
- University College London (GB)
- Corresponding author
- Marques, Sueli
- Zeisel, Amit
- Linnarsson, Sten
- ORCID
- Venue
- Science
- Published
- 2016-06-10
- Volume
- 352
- Issue
- 6291
- Pages
- 1326-1329
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- PMC
- PMC5221728
- OpenAlex
- W2415341492
- Cited by
- 1,246
- References
- 33
- Citations by year
- 2026: 94 · 2025: 132 · 2024: 147 · 2023: 126 · 2022: 131 · 2021: 146 · 2020: 113 · 2019: 100 · 2018: 79 · 2017: 64 · 2016: 8 · 2013: 1 · 2012: 1
- FWCI
- 40.79
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Science (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (submittedVersion)
- UCL Discovery (University College London) (submittedVersion)
- Infoscience (Ecole Polytechnique Fédérale de Lausanne) (submittedVersion, cc-by-nc-nd)
- RODIN (Universidad de Cádiz) (submittedVersion, cc-by-nc-nd)
- Funders
- Swedish Research Council
- Swedish Cancer Society
- Wallenberg Scholar
- Söderberg Foundation
- Linnaeus Center in Developmental Biology for Regenerative Medicine (2011-3116, 2011-3318)
- Swedish Foundation for Strategic Research
- European Union (EU)
- Karolinska Institutet
- EU FP7 (GA-2012-600394)
- Petrus and Augusta Hedlunds Foundation
- Novo Nordisk Foundation
- European Research Council (ERC)
- National Natural Science Foundation of China (31471013)
- UK Biotechnology and Biological Sciences Research Council (BB/L003236/1)
- Human Frontier Science Program
- ERC (293544, 261063)
- Wellcome Trust (100269/Z/12/Z, 108726/Z/15/Z)
- Topics
- Life Sciences › Neuroscience › Developmental Neuroscience › Neurogenesis and neuroplasticity mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Single-cell and spatial transcriptomics
- Life Sciences › Neuroscience › Neurology › Neuroinflammation and Neurodegeneration Mechanisms
- Keywords
- oligodendrocyte differentiation, oligodendrocyte precursor cells, PDGFRA, single-cell transcriptomics, mouse brain development, adult brain, motor learning, transcriptional dynamics
- MeSH terms
- Chondroitin Sulfate Proteoglycan 4, Animals, Antigens, Brain
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