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Agrobacterium-Mediated Plant Transformation: Biology and Applications
Open accessAbstract
Plant genetic transformation heavily relies on the bacterial pathogen Agrobacterium tumefaciens as a powerful tool to deliver genes of interest into a host plant. Inside the plant nucleus, the transferred DNA is capable of integrating into the plant genome for inheritance to the next generation (i.e. stable transformation). Alternatively, the foreign DNA can transiently remain in the nucleus without integrating into the genome but still be transcribed to produce desirable gene products (i.e. transient transformation). From the discovery of A. tumefaciens to its wide application in plant biotechnology, numerous aspects of the interaction between A. tumefaciens and plants have been elucidated. This article aims to provide a comprehensive review of the biology and the applications of Agrobacterium-mediated plant transformation, which may be useful for both microbiologists and plant biologists who desire a better understanding of plant transformation, protein expression in plants, and plant-microbe interaction.
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Cites
Floral dip: a simplified method forAgrobacterium‐mediated transformation ofArabidopsis thaliana
Clough, S. J., & Bent, A. F. (1998) · The Plant Journal · doi:10.1046/j.1365-313x.1998.00343.x · Cited by 21,934
Multiplex Genome Engineering Using CRISPR/Cas Systems
Cong, L., Ran, F. A., Cox, D., Lin, S., Barretto, R., Habib, N., Hsu, P. D., Wu, X., Jiang, W., Marraffini, L. A., et al. (2013) · Science · doi:10.1126/science.1231143 · Cited by 15,339
Genome-Wide Insertional Mutagenesis of Arabidopsis thaliana
Alonso, J. M., Stepanova, A. N., Leisse, T. J., Kim, C. J., Chen, H., Shinn, P., Stevenson, D. K., Zimmerman, J., Barajas, P., Cheuk, R., et al. (2003) · Science · doi:10.1126/science.1086391 · Cited by 5,102
Wang, H., Yang, H., Shivalila, C. S., Dawlaty, M. M., Cheng, A. W., Zhang, F., & Jaenisch, R. (2013) · Cell · doi:10.1016/j.cell.2013.04.025 · Cited by 3,495
Efficient genome editing in zebrafish using a CRISPR-Cas system
Hwang, W. Y., Fu, Y., Reyon, D., Maeder, M. L., Tsai, S. Q., Sander, J. D., Peterson, R. T., Yeh, J.-R. J., & Joung, J. K. (2013) · Nature Biotechnology · doi:10.1038/nbt.2501 · Cited by 2,937
The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools
Lamesch, P., Berardini, T. Z., Li, D., Swarbreck, D., Wilks, C., Sasidharan, R., Muller, R., Dreher, K., Alexander, D. L., Garcia-Hernandez, M., et al. (2012) · Nucleic Acids Research · doi:10.1093/nar/gkr1090 · Cited by 2,399
Agrobacterium-mediated transformation of Arabidopsis thaliana using the floral dip method
Zhang, X., Henriques, R., Lin, S.-S., Niu, Q.-W., & Chua, N.-H. (2006) · Nature Protocols · doi:10.1038/nprot.2006.97 · Cited by 2,335
Binary Agrobacterium vectors for plant transformation
Bevan, M. (1984) · Nucleic Acids Research · doi:10.1093/nar/12.22.8711 · Cited by 2,166
Zipfel, C., Kunze, G., Chinchilla, D., Caniard, A., Jones, J. D. G., Boller, T., & Felix, G. (2006) · Cell · doi:10.1016/j.cell.2006.03.037 · Cited by 2,064
Koncz, C., & Schell, J. (1986) · Molecular and General Genetics MGG · doi:10.1007/bf00331014 · Cited by 2,032
In planta Agrobacterium mediated gene transfer by infiltration of adult Arabidopsis thaliana plants
Bechtold, N., Baquero, M., Bonhomme, S., Ferault, M., Horlow, C., Laroche, L., Migdal, M., Mollier, P., Montoro, P., Roux, D., et al. (1993) · HAL · Cited by 1,774
Hoekema, A., Hirsch, P. R., Hooykaas, P. J. J., & Schilperoort, R. A. (1983) · Nature · doi:10.1038/303179a0 · Cited by 1,756
NewAgrobacterium helper plasmids for gene transfer to plants
Hood, E. E., Gelvin, S. B., Melchers, L. S., & Hoekema, A. (1993) · Transgenic Research · doi:10.1007/bf01977351 · Cited by 1,413
Valvekens, D., Montagu, M. V., & Lijsebettens, M. V. (1988) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.85.15.5536 · Cited by 1,277
The Arabidopsis Information Resource (TAIR): gene structure and function annotation
Swarbreck, D., Wilks, C., Lamesch, P., Berardini, T. Z., Garcia-Hernandez, M., Foerster, H., Li, D., Meyer, T., Muller, R., Ploetz, L., et al. (2007) · Nucleic Acids Research · doi:10.1093/nar/gkm965 · Cited by 1,074
A DNA Transformation–Competent Arabidopsis Genomic Library in Agrobacterium
Lazo, G. R., Stein, P. A., & Ludwig, R. A. (1991) · Bio/Technology · doi:10.1038/nbt1091-963 · Cited by 1,048
Stachel, S. E., Messens, E., MONTAGU, M. V., & Zambryski, P. (1985) · Nature · doi:10.1038/318624a0 · Cited by 1,022
Bechtold, N., & Pelletier, G. (1998) · Arabidopsis Protocols · doi:10.1385/0-89603-391-0:259 · Cited by 1,018
Rhee, S. Y. (2003) · Nucleic Acids Research · doi:10.1093/nar/gkg076 · Cited by 920
Agrobacterium tumefaciens-mediated transformation of filamentous fungi
de Groot, M. J. A., Bundock, P., Hooykaas, P. J. J., & Beijersbergen, A. G. M. (1998) · Nature Biotechnology · doi:10.1038/nbt0998-839 · Cited by 892
Hood, E. E., Helmer, G. L., Fraley, R. T., & Chilton, M. D. (1986) · Journal of Bacteriology · doi:10.1128/jb.168.3.1291-1301.1986 · Cited by 873
Zambryski, P., Joos, H., Genetello, C., Leemans, J., Van Montagu, M., & Schell, J. (1983) · The EMBO Journal · doi:10.1002/j.1460-2075.1983.tb01715.x · Cited by 790
Mammalian polymerase θ promotes alternative NHEJ and suppresses recombination
Mateos-Gomez, P. A., Gong, F., Nair, N., Miller, K. M., Lazzerini-Denchi, E., & Sfeir, A. (2015) · Nature · doi:10.1038/nature14157 · Cited by 765
Biological Diversity of Prokaryotic Type IV Secretion Systems
Alvarez-Martinez, C. E., & Christie, P. J. (2009) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00023-09 · Cited by 729
Efficient octopine Ti plasmid-derived vectors for Agrobacterium-mediated gene transfer to plants
Deblaere, R., Bytebier, B., De Greve, H., Deboeck, F., Schell, J., Van Montagu, M., & Leemans, J. (1985) · Nucleic Acids Research · doi:10.1093/nar/13.13.4777 · Cited by 705
De Cleene, M., & De Ley, J. (1976) · The Botanical Review · doi:10.1007/bf02860827 · Cited by 682
Plasmid required for virulence of Agrobacterium tumefaciens
Watson, B., Currier, T. C., Gordon, M. P., Chilton, M. D., & Nester, E. W. (1975) · Journal of Bacteriology · doi:10.1128/jb.123.1.255-264.1975 · Cited by 671
Trans-kingdom T-DNA transfer from Agrobacterium tumefaciens to Saccharomyces cerevisiae.
Bundock, P., den Dulk-Ras, A., Beijersbergen, A., & Hooykaas, P. J. (1995) · The EMBO Journal · doi:10.1002/j.1460-2075.1995.tb07323.x · Cited by 653
Stable transformation of maize after gene transfer by electroporation
Fromm, M. E., Taylor, L. P., & Walbot, V. (1986) · Nature · doi:10.1038/319791a0 · Cited by 637
BIOGENESIS, ARCHITECTURE, AND FUNCTION OF BACTERIAL TYPE IV SECRETION SYSTEMS
Christie, P. J., Atmakuri, K., Krishnamoorthy, V., Jakubowski, S., & Cascales, E. (2005) · Annual Review of Microbiology · doi:10.1146/annurev.micro.58.030603.123630 · Cited by 630
Helicobacter exploits integrin for type IV secretion and kinase activation
Kwok, T., Zabler, D., Urman, S., Rohde, M., Hartig, R., Wessler, S., Misselwitz, R., Berger, J., Sewald, N., König, W., et al. (2007) · Nature · doi:10.1038/nature06187 · Cited by 619
Huala, E. (2001) · Nucleic Acids Research · doi:10.1093/nar/29.1.102 · Cited by 575
Wroblewski, T., Tomczak, A., & Michelmore, R. (2005) · Plant Biotechnology Journal · doi:10.1111/j.1467-7652.2005.00123.x · Cited by 558
Feldmann, K. A., & David Marks, M. (1987) · Molecular and General Genetics MGG · doi:10.1007/bf00330414 · Cited by 515
Hauck, P., Thilmony, R., & He, S. Y. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1431173100 · Cited by 515
Agrobacterium-mediated transformation as a tool for functional genomics in fungi
Michielse, C. B., Hooykaas, P. J. J., van den Hondel, C. A. M. J. J., & Ram, A. F. J. (2005) · Current Genetics · doi:10.1007/s00294-005-0578-0 · Cited by 515
Technical Focus:A guide to Agrobacterium binary Ti vectors
Hellens, R., Mullineaux, P., & Klee, H. (2000) · Trends in Plant Science · doi:10.1016/s1360-1385(00)01740-4 · Cited by 489
BHATTACHARYA, A., SOOD, P., & CITOVSKY, V. (2010) · Molecular Plant Pathology · doi:10.1111/j.1364-3703.2010.00625.x · Cited by 485
Pseudomonas syringae Effector AvrPto Blocks Innate Immunity by Targeting Receptor Kinases
Xiang, T., Zong, N., Zou, Y., Wu, Y., Zhang, J., Xing, W., Li, Y., Tang, X., Zhu, L., Chai, J., et al. (2008) · Current Biology · doi:10.1016/j.cub.2007.12.020 · Cited by 482
The functional organization of the nopaline A. tumefaciens plasmid pTiC58
Holsters, M., Silva, B., Van Vliet, F., Genetello, C., De Block, M., Dhaese, P., Depicker, A., Inzé, D., Engler, G., Villarroel, R., et al. (1980) · Plasmid · doi:10.1016/0147-619x(80)90110-9 · Cited by 455
Inan, G., Zhang, Q., Li, P., Wang, Z., Cao, Z., Zhang, H., Zhang, C., Quist, T. M., Goodwin, S. M., Zhu, J., et al. (2004) · Plant Physiology · doi:10.1104/pp.104.041723 · Cited by 444
The structural biology of type IV secretion systems
Fronzes, R., Christie, P. J., & Waksman, G. (2009) · Nature Reviews Microbiology · doi:10.1038/nrmicro2218 · Cited by 399
Gene transfer to plants by diverse species of bacteria
Broothaerts, W., Mitchell, H. J., Weir, B., Kaines, S., Smith, L. M. A., Yang, W., Mayer, J. E., Roa-Rodríguez, C., & Jefferson, R. A. (2005) · Nature · doi:10.1038/nature03309 · Cited by 387
GABI-Kat SimpleSearch: new features of the Arabidopsis thaliana T-DNA mutant database
Kleinboelting, N., Huep, G., Kloetgen, A., Viehoever, P., & Weisshaar, B. (2012) · Nucleic Acids Research · doi:10.1093/nar/gkr1047 · Cited by 372
Particle bombardment and the genetic enhancement of crops: myths and realities
Altpeter, F., Baisakh, N., Beachy, R., Bock, R., Capell, T., Christou, P., Daniell, H., Datta, K., Datta, S., Dix, P. J., et al. (2005) · Molecular Breeding · doi:10.1007/s11032-004-8001-y · Cited by 371
Efficient Virus-Induced Gene Silencing in Arabidopsis
Burch-Smith, T. M., Schiff, M., Liu, Y., & Dinesh-Kumar, S. P. (2006) · Plant Physiology · doi:10.1104/pp.106.084624 · Cited by 368
Definition of a Bacterial Type IV Secretion Pathway for a DNA Substrate
Cascales, E., & Christie, P. J. (2004) · Science · doi:10.1126/science.1095211 · Cited by 353
Wallden, K., Rivera-Calzada, A., & Waksman, G. (2010) · Cellular Microbiology · doi:10.1111/j.1462-5822.2010.01499.x · Cited by 344
Improved binary vectors for Agrobacterium-mediated plant transformation
McBride, K. E., & Summerfelt, K. R. (1990) · Plant Molecular Biology · doi:10.1007/bf00018567 · Cited by 338
Limpens, E. (2004) · Journal of Experimental Botany · doi:10.1093/jxb/erh122 · Cited by 336
Ma, L.-S., Hachani, A., Lin, J.-S., Filloux, A., & Lai, E.-M. (2014) · Cell Host & Microbe · doi:10.1016/j.chom.2014.06.002 · Cited by 331
Self-citationAgrobacterium T-DNA integration: molecules and models
TZFIRA, T. (2004) · Trends in Genetics · doi:10.1016/j.tig.2004.06.004 · Cited by 311
Structure of a Type IV Secretion System Core Complex
Fronzes, R., Schäfer, E., Wang, L., Saibil, H. R., Orlova, E. V., & Waksman, G. (2009) · Science · doi:10.1126/science.1166101 · Cited by 308
Hilson, P., Allemeersch, J., Altmann, T., Aubourg, S., Avon, A., Beynon, J., Bhalerao, R. P., Bitton, F., Caboche, M., Cannoot, B., et al. (2004) · Genome Research · doi:10.1101/gr.2544504 · Cited by 307
Structure of the outer membrane complex of a type IV secretion system
Chandran, V., Fronzes, R., Duquerroy, S., Cronin, N., Navaza, J., & Waksman, G. (2009) · Nature · doi:10.1038/nature08588 · Cited by 303
Structure of a type IV secretion system
Low, H. H., Gubellini, F., Rivera-Calzada, A., Braun, N., Connery, S., Dujeancourt, A., Lu, F., Redzej, A., Fronzes, R., Orlova, E. V., et al. (2014) · Nature · doi:10.1038/nature13081 · Cited by 303
Genetic transformation of HeLa cells by Agrobacterium
Kunik, T., Tzfira, T., Kapulnik, Y., Gafni, Y., Dingwall, C., & Citovsky, V. (2001) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.98.4.1871 · Cited by 302
Seed and Molecular Resources for Arabidopsis
Scholl, R. L., May, S. T., & Ware, D. H. (2000) · Plant Physiology · doi:10.1104/pp.124.4.1477 · Cited by 292
Vergunst, A. C., van Lier, M. C. M., den Dulk-Ras, A., Grosse Stüve, T. A., Ouwehand, A., & Hooykaas, P. J. J. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0406241102 · Cited by 284
Barton, K. A., Binns, A. N., Matzke, A. J. M., & Chilton, M.-D. (1983) · Cell · doi:10.1016/0092-8674(83)90288-x · Cited by 282
Mechanism and structure of the bacterial type IV secretion systems
Christie, P. J., Whitaker, N., & González-Rivera, C. (2014) · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research · doi:10.1016/j.bbamcr.2013.12.019 · Cited by 280
Trojan Horse Strategy in Agrobacterium Transformation: Abusing MAPK Defense Signaling
Djamei, A., Pitzschke, A., Nakagami, H., Rajh, I., & Hirt, H. (2007) · Science · doi:10.1126/science.1148110 · Cited by 275
Travella, S., Ross, S. M., Harden, J., Everett, C., Snape, J. W., & Harwood, W. A. (2005) · Plant Cell Reports · doi:10.1007/s00299-004-0892-x · Cited by 255
Li, J.-F., Park, E., von Arnim, A. G., & Nebenführ, A. (2009) · Plant Methods · doi:10.1186/1746-4811-5-6 · Cited by 255
De Neve, M., De Buck, S., Jacobs, A., Van Montagu, M., & Depicker, A. (1997) · The Plant Journal · doi:10.1046/j.1365-313x.1997.11010015.x · Cited by 254
TAIR: a resource for integrated Arabidopsis data
Garcia-Hernandez, M., Berardini, T., Chen, G., Crist, D., Doyle, A., Huala, E., Knee, E., Lambrecht, M., Miller, N., Mueller, L., et al. (2002) · Functional & Integrative Genomics · doi:10.1007/s10142-002-0077-z · Cited by 254
McCullen, C. A., & Binns, A. N. (2006) · Annual Review of Cell and Developmental Biology · doi:10.1146/annurev.cellbio.22.011105.102022 · Cited by 253
Trieu, A. T., Burleigh, S. H., Kardailsky, I. V., Maldonado‐Mendoza, I. E., Versaw, W. K., Blaylock, L. A., Shin, H., Chiou, T., Katagi, H., Dewbre, G. R., et al. (2000) · The Plant Journal · doi:10.1046/j.1365-313x.2000.00757.x · Cited by 251
T-DNA Binary Vectors and Systems
Lee, L.-Y., & Gelvin, S. B. (2008) · Plant Physiology · doi:10.1104/pp.107.113001 · Cited by 251
Genetic transformation of the green alga—Chlamydomonas reinhardtii by Agrobacterium tumefaciens
Kumar, S. V., Misquitta, R. W., Reddy, V. S., Rao, B. J., & Rajam, M. V. (2004) · Plant Science · doi:10.1016/j.plantsci.2003.11.012 · Cited by 246
A multiplex CRISPR/Cas9 platform for fast and efficient editing of multiple genes in Arabidopsis
Zhang, Z., Mao, Y., Ha, S., Liu, W., Botella, J. R., & Zhu, J.-K. (2016) · Plant Cell Reports · doi:10.1007/s00299-015-1900-z · Cited by 245
Sheikholeslam, S. N., & Weeks, D. P. (1987) · Plant Molecular Biology · doi:10.1007/bf00021308 · Cited by 221
Lee, L.-Y., Fang, M.-J., Kuang, L.-Y., & Gelvin, S. B. (2008) · Plant Methods · doi:10.1186/1746-4811-4-24 · Cited by 221
Marion, J., Bach, L., Bellec, Y., Meyer, C., Gissot, L., & Faure, J. (2008) · The Plant Journal · doi:10.1111/j.1365-313x.2008.03596.x · Cited by 219
Transformation of Arabidopsis thaliana with Agrobacterium tumefaciens
Lloyd, A. M., Barnason, A. R., Rogers, S. G., Byrne, M. C., Fraley, R. T., & Horsch, R. B. (1986) · Science · doi:10.1126/science.234.4775.464 · Cited by 218
Agrobacterium tumefaciens-mediated transformation of yeast.
Piers, K. L., Heath, J. D., Liang, X., et al. (1996) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.93.4.1613 · Cited by 216
Atmakuri, K., Cascales, E., & Christie, P. J. (2004) · Molecular Microbiology · doi:10.1111/j.1365-2958.2004.04345.x · Cited by 215
Shou, H., Frame, B. R., Whitham, S. A., & Wang, K. (2004) · Molecular Breeding · doi:10.1023/b:molb.0000018767.64586.53 · Cited by 214
Plant Proteins Involved in Agrobacterium-Mediated Genetic Transformation
Gelvin, S. B. (2010) · Annual Review of Phytopathology · doi:10.1146/annurev-phyto-080508-081852 · Cited by 213
Role of bacterial cellulose fibrils in Agrobacterium tumefaciens infection
Matthysse, A. G. (1983) · Journal of Bacteriology · doi:10.1128/jb.154.2.906-915.1983 · Cited by 212
Bent, A. F. (2000) · Plant Physiology · doi:10.1104/pp.124.4.1540 · Cited by 210
Agrobacterium tumefaciens mutants affected in attachment to plant cells
Douglas, C. J., Halperin, W., & Nester, E. W. (1982) · Journal of Bacteriology · doi:10.1128/jb.152.3.1265-1275.1982 · Cited by 197
Surface contact stimulates the just‐in‐time deployment of bacterial adhesins
Li, G., Brown, P. J. B., Tang, J. X., Xu, J., Quardokus, E. M., Fuqua, C., & Brun, Y. V. (2012) · Molecular Microbiology · doi:10.1111/j.1365-2958.2011.07909.x · Cited by 193
Processed VirB2 Is the Major Subunit of the Promiscuous Pilus of Agrobacterium tumefaciens
Lai, E., & Kado, C. I. (1998) · Journal of Bacteriology · doi:10.1128/jb.180.10.2711-2717.1998 · Cited by 192
Self-citationAnand, A., Uppalapati, S. R., Ryu, C.-M., Allen, S. N., Kang, L., Tang, Y., & Mysore, K. S. (2008) · Plant Physiology · doi:10.1104/pp.107.111302 · Cited by 191
Jin, S., Prusti, R. K., Roitsch, T. G., Ankenbauer, R. G., & Nester, E. W. (1990) · Journal of Bacteriology · doi:10.1128/jb.172.9.4945-4950.1990 · Cited by 190
Wu, H.-Y., Liu, K.-H., Wang, Y.-C., Wu, J.-F., Chiu, W.-L., Chen, C.-Y., Wu, S.-H., Sheen, J., & Lai, E.-M. (2014) · Plant Methods · doi:10.1186/1746-4811-10-19 · Cited by 188
Self-citationConjugative Pili of IncP Plasmids, and the Ti Plasmid T Pilus Are Composed of Cyclic Subunits
Eisenbrandt, R., Kalkum, M., Lai, E.-M., Lurz, R., Kado, C. I., & Lanka, E. (1999) · Journal of Biological Chemistry · doi:10.1074/jbc.274.32.22548 · Cited by 186
Self-citationBallas, N., & Citovsky, V. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.20.10723 · Cited by 184
A case of promiscuity: Agrobacterium's endless hunt for new partners
Lacroix, B., Tzfira, T., Vainstein, A., & Citovsky, V. (2006) · Trends in Genetics · doi:10.1016/j.tig.2005.10.004 · Cited by 181
Jin, S., Roitsch, T., Ankenbauer, R. G., Gordon, M. P., & Nester, E. W. (1990) · Journal of Bacteriology · doi:10.1128/jb.172.2.525-530.1990 · Cited by 178
Lee, C.-W., Efetova, M., Engelmann, J. C., Kramell, R., Wasternack, C., Ludwig-Müller, J., Hedrich, R., & Deeken, R. (2009) · The Plant Cell · doi:10.1105/tpc.108.064576 · Cited by 173
Increased frequency of homologous recombination and T‐DNA integration in Arabidopsis CAF‐1 mutants
Endo, M., Ishikawa, Y., Osakabe, K., Nakayama, S., Kaya, H., Araki, T., Shibahara, K., Abe, K., Ichikawa, H., Valentine, L., et al. (2006) · The EMBO Journal · doi:10.1038/sj.emboj.7601434 · Cited by 168
The loss of tumor-initiating ability inAgrobacterium tumefaciens by incubation at high temperature
Hamilton, R. H., & Fall, M. Z. (1971) · Experientia · doi:10.1007/bf02145913 · Cited by 166
Yuan, Z.-C., Edlind, M. P., Liu, P., Saenkham, P., Banta, L. M., Wise, A. A., Ronzone, E., Binns, A. N., Kerr, K., & Nester, E. W. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0704866104 · Cited by 165
The expanding bacterial type IV secretion lexicon
Bhatty, M., Laverde Gomez, J. A., & Christie, P. J. (2013) · Research in Microbiology · doi:10.1016/j.resmic.2013.03.012 · Cited by 165
Gaspar, Y. M., Nam, J., Schultz, C. J., Lee, L.-Y., Gilson, P. R., Gelvin, S. B., & Bacic, A. (2004) · Plant Physiology · doi:10.1104/pp.104.045542 · Cited by 162
Friesner, J., & Britt, A. B. (2003) · The Plant Journal · doi:10.1046/j.1365-313x.2003.01738.x · Cited by 162
Plant Transformation Technology: Developments and Applications
Newell, C. A. (2000) · Molecular Biotechnology · doi:10.1385/mb:16:1:53 · Cited by 160
Non-homologous end-joining proteins are required for Agrobacterium T-DNA integration
van Attikum, H. (2001) · The EMBO Journal · doi:10.1093/emboj/20.22.6550 · Cited by 159
Biological systems of the host cell involved in Agrobacterium infection
Citovsky, V., Kozlovsky, S. V., Lacroix, B., Zaltsman, A., Dafny-Yelin, M., Vyas, S., Tovkach, A., & Tzfira, T. (2006) · Cellular Microbiology · doi:10.1111/j.1462-5822.2006.00830.x · Cited by 159
Albright, L. M., Yanofsky, M. F., Leroux, B., Q, D., & Nester, E. W. (1987) · Journal of Bacteriology · doi:10.1128/jb.169.3.1046-1055.1987 · Cited by 158
Nam, J., Matthysse, A. G., & Gelvin, S. B. (1997) · The Plant Cell · doi:10.1105/tpc.9.3.317 · Cited by 158
Wu, H., Chung, P.-C., Shih, H., Wen, S., & Lai, E. (2008) · Journal of Bacteriology · doi:10.1128/jb.01775-07 · Cited by 157
Self-citationSchmidt‐Eisenlohr, H., Domke, N., Angerer, C., Wanner, G., Zambryski, P., & Baron, C. (1999) · Journal of Bacteriology · doi:10.1128/jb.181.24.7485-7492.1999 · Cited by 156
Agrobacterium VirB10, an ATP energy sensor required for type IV secretion
Cascalès, E., & Christie, P. J. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0405843101 · Cited by 155
T-DNA integration in plants results from polymerase-θ-mediated DNA repair
van Kregten, M., de Pater, S., Romeijn, R. J., van Schendel, R., Hooykaas, P. J. J., & Tijsterman, M. (2016) · Nature Plants · doi:10.1038/nplants.2016.164 · Cited by 155
Improving transformation efficiency ofArabidopsis thaliana by modifying the floral dip method
Martı́nez-Trujillo, M., Limones-Briones, V., Cabrera‐Ponce, J. L., & Herrera‐Estrella, L. (2004) · Plant Molecular Biology Reporter · doi:10.1007/bf02773350 · Cited by 149
Ankenbauer, R. G., & Nester, E. W. (1990) · Journal of Bacteriology · doi:10.1128/jb.172.11.6442-6446.1990 · Cited by 146
Curtis, I. S., & Nam, H. G. (2001) · Transgenic Research · doi:10.1023/a:1016600517293 · Cited by 144
Transgene inheritance in plants genetically engineered by microprojectile bombardment
Pawlowski, W. P., & Somers, D. A. (1996) · Molecular Biotechnology · doi:10.1007/bf02762320 · Cited by 144
Role for [corrected] Agrobacterium tumefaciens ChvA protein in export of beta-1,2-glucan
Cangelosi, G. A., Martinetti, G., Leigh, J. A., et al. (1989) · Journal of Bacteriology · doi:10.1128/jb.171.3.1609-1615.1989 · Cited by 139
The VirB5 protein localizes to the T-pilus tips in Agrobacterium tumefaciens
Aly, K. A., & Baron, C. (2007) · Microbiology · doi:10.1099/mic.0.2007/010462-0 · Cited by 139
Floral Spray Transformation Can Efficiently Generate Arabidopsis
Chung, M.-H., Chen, M.-K., & Pan, S.-M. (2000) · Transgenic Research · doi:10.1023/a:1026522104478 · Cited by 138
The roles of bacterial and host plant factors in Agrobacterium-mediated genetic transformation
Lacroix, B., & Citovsky, V. (2013) · The International Journal of Developmental Biology · doi:10.1387/ijdb.130199bl · Cited by 138
Agrobacterium infection and plant defense—transformation success hangs by a thread
Pitzschke, A. (2013) · Frontiers in Plant Science · doi:10.3389/fpls.2013.00519 · Cited by 136
Jin, S., Roitsch, T. G., Christie, P. J., & Nester, E. W. (1990) · Journal of Bacteriology · doi:10.1128/jb.172.2.531-537.1990 · Cited by 135
Mechanisms and regulation of surface interactions and biofilm formation in Agrobacterium
Heindl, J. E., Wang, Y., Heckel, B. C., Mohari, B., Feirer, N., & Fuqua, C. (2014) · Frontiers in Plant Science · doi:10.3389/fpls.2014.00176 · Cited by 133
den Eede, G. V., Aarts, H. J. M., Buhk, H.-J., Corthier, G., Flint, H. J., Hammes, W. P., Jacobsen, B., Midtvedt, T., van der Vossen, J., von Wright, A., et al. (2004) · Food and Chemical Toxicology · doi:10.1016/j.fct.2004.02.001 · Cited by 130
Evidence for stable transformation of wheat by floral dip in Agrobacterium tumefaciens
Zale, J. M., Agarwal, S., Loar, S. N., & Steber, C. M. (2009) · Plant Cell Reports · doi:10.1007/s00299-009-0696-0 · Cited by 129
A versatile vector system for multiple gene expression in plants
Chung, S.-M., Frankman, E. L., & Tzfira, T. (2005) · Trends in Plant Science · doi:10.1016/j.tplants.2005.06.001 · Cited by 128
Kim, M. J., Baek, K., & Park, C. (2009) · Plant Cell Reports · doi:10.1007/s00299-009-0717-z · Cited by 127
An efficient Agrobacterium ‐mediated transient transformation of Arabidopsis
Tsuda, K., Qi, Y., Nguyen, L. V., Bethke, G., Tsuda, Y., Glazebrook, J., & Katagiri, F. (2011) · The Plant Journal · doi:10.1111/j.1365-313x.2011.04819.x · Cited by 127
Li, L., Jia, Y., Hou, Q., et al. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.192439499 · Cited by 125
Gallego, M. E., Bleuyard, J., Cotterell, S., Jalut, N., & White, C. I. (2003) · The Plant Journal · doi:10.1046/j.1365-313x.2003.01827.x · Cited by 124
VirB2 and VirB5 proteins: specialized adhesins in bacterial type-IV secretion systems?
Backert, S., Fronzes, R., & Waksman, G. (2008) · Trends in Microbiology · doi:10.1016/j.tim.2008.07.001 · Cited by 124
Yuan, Z., Liu, P., Saenkham, P., Kerr, K. F., & Nester, E. W. (2007) · Journal of Bacteriology · doi:10.1128/jb.01387-07 · Cited by 123
Berger, B. R., & Christie, P. J. (1993) · Journal of Bacteriology · doi:10.1128/jb.175.6.1723-1734.1993 · Cited by 122
Bhattacharjee, S., Lee, L., Oltmanns, H., et al. (2008) · The Plant Cell · doi:10.1105/tpc.108.060467 · Cited by 121
Zhu, J., Shi, J., Singh, U., Wyatt, S. E., Bressan, R. A., Hasegawa, P. M., & Carpita, N. C. (1993) · The Plant Journal · doi:10.1111/j.1365-313x.1993.00637.x · Cited by 120
Lacroix, B., Vaidya, M., Tzfira, T., & Citovsky, V. (2004) · The EMBO Journal · doi:10.1038/sj.emboj.7600524 · Cited by 120
Jayaswal, R. K., Veluthambi, K., Gelvin, S. B., & Slightom, J. L. (1987) · Journal of Bacteriology · doi:10.1128/jb.169.11.5035-5045.1987 · Cited by 115
Liu, P., & Nester, E. W. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0600366103 · Cited by 110
Wu, C., Lin, J.-S., Shaw, G., & Lai, E. (2012) · PLoS Pathogens · doi:10.1371/journal.ppat.1002938 · Cited by 110
Self-citationNuclear Localization Signal Peptides Induce Molecular Delivery along Microtubules
Salman, H., Abu‐Arish, A., Oliel, S., et al. (2005) · Biophysical Journal · doi:10.1529/biophysj.105.060160 · Cited by 108
Yi, H., Sardesai, N., Fujinuma, T., Chan, C.-W., Veena, & Gelvin, S. B. (2006) · The Plant Cell · doi:10.1105/tpc.105.039719 · Cited by 108
Bechtold, N., Jaudeau, B., Jolivet, S., Maba, B., Vezon, D., Voisin, R., & Pelletier, G. (2000) · Genetics · doi:10.1093/genetics/155.4.1875 · Cited by 107
Agrobacterium VirD2 protein interacts with plant host cyclophilins
Deng, W., Chen, L., Wood, D. W., Metcalfe, T. L., Liang, X., Gordon, M. P., Comai, L., & Nester, E. W. (1998) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.95.12.7040 · Cited by 106
Mechanisms and regulation of polar surface attachment in Agrobacterium tumefaciens
Tomlinson, A. D., & Fuqua, C. (2009) · Current Opinion in Microbiology · doi:10.1016/j.mib.2009.09.014 · Cited by 101
Bakó, L., Umeda, M., Tiburcio, A. F., Schell, J., & Koncz, C. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1733208100 · Cited by 99
Kumar, R. B., Xie, Y., & Das, A. (2000) · Molecular Microbiology · doi:10.1046/j.1365-2958.2000.01876.x · Cited by 97
Structure of the VirB4 ATPase, alone and bound to the core complex of a type IV secretion system
Wallden, K., Williams, R., Yan, J., Lian, P. W., Wang, L., Thalassinos, K., Orlova, E. V., & Waksman, G. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1201428109 · Cited by 92
Jakubowski, S. J., Cascalès, E., Krishnamoorthy, V., & Christie, P. J. (2005) · Journal of Bacteriology · doi:10.1128/jb.187.10.3486-3495.2005 · Cited by 92
Baron, C., Domke, N., Beinhofer, M., & Hapfelmeier, S. (2001) · Journal of Bacteriology · doi:10.1128/jb.183.23.6852-6861.2001 · Cited by 92
Frandsen, R. J. N. (2011) · Journal of Microbiological Methods · doi:10.1016/j.mimet.2011.09.004 · Cited by 87
Wagner, V. T., & Matthysse, A. G. (1992) · Journal of Bacteriology · doi:10.1128/jb.174.18.5999-6003.1992 · Cited by 85
Zhu, Y., Nam, J., Carpita, N. C., et al. (2003) · PLANT PHYSIOLOGY · doi:10.1104/pp.103.030726 · Cited by 85
Kerr, J., & Christie, P. J. (2010) · Journal of Bacteriology · doi:10.1128/jb.00557-10 · Cited by 82
Agrobacterium VirB10 domain requirements for type IV secretion and T pilus biogenesis
Jakubowski, S. J., Kerr, J., Garza, I., Krishnamoorthy, V., Bayliss, R. W., Waksman, G., & Christie, P. J. (2008) · Molecular Microbiology · doi:10.1111/j.1365-2958.2008.06565.x · Cited by 81
Handling Arabidopsis Plants: Growth, Preservation of Seeds, Transformation, and Genetic Crosses
Rivero, L., Scholl, R., Holomuzki, N., CRIST, D. K., Erich Grotewold, A., & Brkljacić, J. (2013) · Methods in molecular biology · doi:10.1007/978-1-62703-580-4_1 · Cited by 80
Chateau, S., Sangwan, R. S., & Sangwan-Norreel, B. S. (2000) · Journal of Experimental Botany · doi:10.1093/jexbot/51.353.1961 · Cited by 77
T-DNA from Agrobacterium tumefaciens as an efficient tool for gene targeting in Kluyveromyces lactis
Bundock, P. C., Mroczek, K., Winkler, A. A., Steensma, H. Y., & Hooykaas, P. J. J. (1999) · Molecular and General Genetics MGG · doi:10.1007/s004380050948 · Cited by 77
Nishizawa‐Yokoi, A., Nonaka, S., Saika, H., Kwon, Y., Osakabe, K., & Toki, S. (2012) · New Phytologist · doi:10.1111/j.1469-8137.2012.04350.x · Cited by 77
Heckel, B. C., Tomlinson, A. D., Morton, E. R., Choi, J.-H., & Fuqua, C. (2014) · Journal of Bacteriology · doi:10.1128/jb.01751-14 · Cited by 76
Wang, W. C., Menon, G., & Hansen, G. (2003) · Plant Cell Reports · doi:10.1007/s00299-003-0691-9 · Cited by 74
In Planta Agrobacterium-Mediated Transformation by Vacuum Infiltration
Tague, B. W., & Mantis, J. (2006) · Humana Press eBooks · doi:10.1385/1-59745-003-0:215 · Cited by 72
Xu, J., Kim, J., Danhorn, T., Merritt, P. M., & Fuqua, C. (2012) · Research in Microbiology · doi:10.1016/j.resmic.2012.10.013 · Cited by 72
Beaty, J. S., Powell, G. K., Lica, L., Regier, D. A., MacDonald, E. M. S., Hommes, N. G., & Morris, R. O. (1986) · Molecular and General Genetics MGG · doi:10.1007/bf00333966 · Cited by 72
Fullner, K. J., Stephens, K. M., & Nester, E. W. (1994) · Molecular and General Genetics MGG · doi:10.1007/bf00297277 · Cited by 71
VirB1* Promotes T-Pilus Formation in the vir -Type IV Secretion System of Agrobacterium tumefaciens
Zupan, J. R., Hackworth, C. A., Aguilar, J., Ward, D. V., & Zambryski, P. (2007) · Journal of Bacteriology · doi:10.1128/jb.00480-07 · Cited by 71
Peña, A., Matilla, I., Martín‐Benito, J., Valpuesta, J., Carrascosa, J. L., de la Cruz, F., Cabezón, E., & Aréchaga, I. (2012) · Journal of Biological Chemistry · doi:10.1074/jbc.m112.413849 · Cited by 69
Effect of chromatin upon Agrobacterium T-DNA integration and transgene expression
Gelvin, S. B., & Kim, S. (2007) · Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression · doi:10.1016/j.bbaexp.2007.04.005 · Cited by 68
The development of the biolistic process
Sanford, J. C. (2000) · In Vitro Cellular & Developmental Biology - Plant · doi:10.1007/s11627-000-0056-9 · Cited by 67
A Functional Bacterium-to-Plant DNA Transfer Machinery of Rhizobium etli
Lacroix, B., & Citovsky, V. (2016) · PLoS Pathogens · doi:10.1371/journal.ppat.1005502 · Cited by 66
Buck, S. D., Wilde, C. D., Montagu, M. V., & Depicker, A. (2000) · Molecular Plant-Microbe Interactions · doi:10.1094/mpmi.2000.13.6.658 · Cited by 65
Wendt, T., Doohan, F. M., & Mullins, E. D. (2011) · Transgenic Research · doi:10.1007/s11248-011-9553-3 · Cited by 65
Transgenic Plants: An Historical Perspective
Herrera‐Estrella, L., Simpson, J. K., & Martínez-Trujillo, M. (2004) · Humana Press eBooks · doi:10.1385/1-59259-827-7:003 · Cited by 62
DNA Substrate-Induced Activation of the Agrobacterium VirB/VirD4 Type IV Secretion System
Cascalès, E., Atmakuri, K., Sarkar, M. K., & Christie, P. J. (2013) · Journal of Bacteriology · doi:10.1128/jb.00114-13 · Cited by 58
Maresh, J. J., Zhang, J., & Lynn, D. G. (2006) · ACS Chemical Biology · doi:10.1021/cb600051w · Cited by 58
Park, S., Vaghchhipawala, Z. E., Vasudevan, B., Lee, L., Shen, Y., Singer, K., Waterworth, W. M., Zhang, Z. J., West, C. E., Mysore, K. S., et al. (2015) · The Plant Journal · doi:10.1111/tpj.12779 · Cited by 52
Banta, L. M., Bohne, J., Lovejoy, S. D., & Dostal, K. (1998) · Journal of Bacteriology · doi:10.1128/jb.180.24.6597-6606.1998 · Cited by 52
Agrobacterium delivers VirE2 protein into host cells via clathrin-mediated endocytosis
Li, X., & Pan, S. Q. (2017) · Science Advances · doi:10.1126/sciadv.1601528 · Cited by 52
Llosa, M., Zupan, J. R., Baron, C., & Zambryski, P. (2000) · Journal of Bacteriology · doi:10.1128/jb.182.12.3437-3445.2000 · Cited by 51
Proteomic analysis of Agrobacterium tumefaciens response to the vir gene inducer acetosyringone
Lai, E., Shih, H., Wen, S., Cheng, M., Hwang, H., & Chiu, S. (2006) · PROTEOMICS · doi:10.1002/pmic.200600254 · Cited by 48
Self-citationAgrobacterium ‐mediated transformation of sea urchin embryos
Bulgakov, V. P., Kiselev, K. V., Yakovlev, K. V., Zhuravlev, Y. N., Gontcharov, A. A., & Odintsova, N. A. (2006) · Biotechnology Journal · doi:10.1002/biot.200500045 · Cited by 47
Pelczar, P., Kalck, V., Gomez, D., & Höhn, B. (2004) · EMBO Reports · doi:10.1038/sj.embor.7400165 · Cited by 46
Agrobacterium-Mediated Gene Transfer in Plants and Biosafety Considerations
Mehrotra, S., & Goyal, V. (2012) · Applied Biochemistry and Biotechnology · doi:10.1007/s12010-012-9910-6 · Cited by 43
Durand, É., Oomen, C. J., & Waksman, G. (2010) · Journal of Bacteriology · doi:10.1128/jb.01384-09 · Cited by 43
Jia, Q., Bundock, P., Hooykaas, P. J. J., & de Pater, S. (2012) · Journal of Botany · doi:10.1155/2012/989272 · Cited by 39
Agrobacterium and Plant Biotechnology
Banta, L. M., & Montenegro, M. (2007) · Springer eBooks · doi:10.1007/978-0-387-72290-0_3 · Cited by 36
Transient Transformation of Plants
Jones, H. D., Doherty, A., & Sparks, C. A. (2009) · Methods in molecular biology · doi:10.1007/978-1-59745-427-8_8 · Cited by 36
Mestiri, I., Norre, F., Gallego, M. E., & White, C. I. (2013) · The Plant Journal · doi:10.1111/tpj.12398 · Cited by 34
Hwang, H., Wu, E. T., Liu, S. ‐., et al. (2013) · Plant Pathology · doi:10.1111/ppa.12046 · Cited by 33
Self-citationNam, J., Mysore, K. S., & Gelvin, S. B. (1998) · Molecular Plant-Microbe Interactions · doi:10.1094/mpmi.1998.11.11.1136 · Cited by 32
Kalogeraki, V. S., Zhu, J., Eberhard, A., Madsen, E. L., & Winans, S. C. (1999) · Molecular Microbiology · doi:10.1046/j.1365-2958.1999.01617.x · Cited by 32
Yang, Q., Li, X., Tu, H., & Pan, S. Q. (2017) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1612098114 · Cited by 30
Root Transformation by Agrobacterium tumefaciens
Vergunst, A. C., de Waal, E. C., & Hooykaas, P. J. J. (1998) · Humana Press eBooks · doi:10.1385/0-89603-391-0:227 · Cited by 23
Durand, É., Waksman, G., & Receveur‐Brechot, V. (2011) · BMC Structural Biology · doi:10.1186/1472-6807-11-4 · Cited by 21
Magori, S., & Citovsky, V. (2012) · PLANT PHYSIOLOGY · doi:10.1104/pp.112.200949 · Cited by 20
Cameron, T. A., Roper, M. L., & Zambryski, P. (2012) · PLoS ONE · doi:10.1371/journal.pone.0042219 · Cited by 15
GARNet, the Genomic Arabidopsis Resource Network
Beale, M. H., Dupree, P., Lilley, K. S., et al. (2002) · Trends in Plant Science · doi:10.1016/s1360-1385(01)02224-5 · Cited by 10
Arabidopsis Database and Stock Resources
Li, D., Dreher, K. A., Knee, E. M., Brkljacić, J., Grotewold, E., Berardini, T., Lamesch, P., Garcia-Hernandez, M., Reiser, L., & Huala, E. (2013) · Methods in molecular biology · doi:10.1007/978-1-62703-580-4_4 · Cited by 9
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Verma, P., Tandon, R., Yadav, G., & Gaur, V. (2020) · Frontiers in Genetics · doi:10.3389/fgene.2020.574549 · Cited by 29
Santos, M. N. M., Pintor, K. L., Hsieh, P.-Y., Cheung, Y.-W., Sung, L.-K., Shih, Y.-L., & Lai, E.-M. (2024) · Frontiers in Microbiology · doi:10.3389/fmicb.2024.1351590 · Cited by 5
Self-citation
Metadata
- Authors
- Hwang, H.-H., Yu, M., & Lai, E.-M.
- Venue
- The Arabidopsis Book
- Publisher
- BioOne
- Published
- 2017-01
- Volume
- 15
- Pages
- e0186
- ISSN
- 1543-8120 (ISSN-L)
- OpenAlex
- W2766370739
- Cited by
- 312
- References
- 192
- FWCI
- 5.14
- Type
- journal article
- Language
- en
- Open access
- diamond
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