UCSF ChimeraX: Tools for structure building and analysis

Basic local alignment search tool

Altschul, S. F., Gish, W., Miller, W., Myers, E. W., & Lipman, D. J. (1990) · Journal of Molecular Biology · doi:10.1006/jmbi.1990.9999 · Cited by 98,669

Highly accurate protein structure prediction with AlphaFold

Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03819-2 · Cited by 43,764

ColabFold - Making protein folding accessible to all

Mirdita, M., Schütze, K., Moriwaki, Y., Heo, L., Ovchinnikov, S., & Steinegger, M. (2021) · doi:10.1101/2021.08.15.456425 · Cited by 9,391

AlphaFold Protein Structure Database: massively expanding the structural coverage of protein-sequence space with high-accuracy models

Varadi, M., Anyango, S., Deshpande, M., Nair, S., Natassia, C., Yordanova, G., Yuan, D., Stroe, O., Wood, G., Laydon, A., et al. (2022) · Nucleic Acids Research · doi:10.1093/nar/gkab1061 · Cited by 7,850 · cited 1×

UniProt: the Universal Protein Knowledgebase in 2023

The UniProt Consortium, Bateman, A., Martin, M.-J., Orchard, S., Magrane, M., Ahmad, S., Alpi, E., Bowler-Barnett, E. H., Britto, R., Bye-A-Jee, H., et al. (2023) · Nucleic Acids Research · doi:10.1093/nar/gkac1052 · Cited by 7,210

Evolutionary-scale prediction of atomic level protein structure with a language model

Lin, Z., Akin, H., Rao, R., Hie, B., Zhu, Z., Lu, W., Smetanin, N., Verkuil, R., Kabeli, O., Shmueli, Y., et al. (2022) · doi:10.1101/2022.07.20.500902 · Cited by 5,990

A smoothed backbone-dependent rotamer library for proteins derived from adaptive kernel density estimates and regressions

Shapovalov, M. V., & Dunbrack, R. L. (2011) · Structure · doi:10.1016/j.str.2011.03.019 · Cited by 1,000

C-reactive protein: structure, function, regulation, and role in clinical diseases

Zhou, H.-H., Tang, Y.-L., Xu, T.-H., & Cheng, B. (2024) · Frontiers in Immunology · doi:10.3389/fimmu.2024.1425168 · Cited by 162

The Virtual Lab of AI agents designs new SARS-CoV-2 nanobodies

Swanson, K., Wu, W., Bulaong, N. L., Pak, J. E., & Zou, J. (2025) · Nature · doi:10.1038/s41586-025-09442-9 · Cited by 169

CHARMM at 45: Enhancements in Accessibility, Functionality, and Speed

Hwang, W., Austin, S. L., Blondel, A., Boittier, E. D., Boresch, S., Buck, M., Buckner, J., Caflisch, A., Chang, H.-T., Cheng, X., et al. (2024) · The Journal of Physical Chemistry B · doi:10.1021/acs.jpcb.4c04100 · Cited by 136

Multiple protein structure alignment at scale with FoldMason

Gilchrist, C. L. M., Mirdita, M., & Steinegger, M. (2026) · Science · doi:10.1126/science.ads6733 · Cited by 117

In-cell architecture of the mitochondrial respiratory chain

Waltz, F., Righetto, R. D., Lamm, L., Salinas-Giegé, T., Kelley, R., Zhang, X., Obr, M., Khavnekar, S., Kotecha, A., & Engel, B. D. (2025) · Science · doi:10.1126/science.ads8738 · Cited by 95

Predictomes, a classifier-curated database of AlphaFold-modeled protein-protein interactions

Schmid, E. W., & Walter, J. C. (2025) · Molecular Cell · doi:10.1016/j.molcel.2025.01.034 · Cited by 120

Structure of human PINK1 at a mitochondrial TOM-VDAC array

Callegari, S., Kirk, N. S., Gan, Z. Y., Dite, T., Cobbold, S. A., Leis, A., Dagley, L. F., Glukhova, A., & Komander, D. (2025) · Science · doi:10.1126/science.adu6445 · Cited by 75

The Virtual Lab: AI Agents Design New SARS-CoV-2 Nanobodies with Experimental Validation

Swanson, K., Wu, W., Bulaong, N. L., Pak, J. E., & Zou, J. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.11.11.623004 · Cited by 56

Reconstitution of BNIP3/NIX-mitophagy initiation reveals hierarchical flexibility of the autophagy machinery

Adriaenssens, E., Schaar, S., Cook, A. S. I., Stuke, J. F. M., Sawa-Makarska, J., Nguyen, T. N., Ren, X., Schuschnig, M., Romanov, J., Khuu, G., et al. (2025) · Nature Cell Biology · doi:10.1038/s41556-025-01712-y · Cited by 53

Structural determinants of co-translational protein complex assembly

Mallik, S., Venezian, J., Lobov, A., Heidenreich, M., Garcia-Seisdedos, H., Yeates, T. O., Shiber, A., & Levy, E. D. (2025) · Cell · doi:10.1016/j.cell.2024.11.013 · Cited by 42

DNA methylation activates retron Ec86 filaments for antiphage defense

Wang, Y., Wang, C., Guan, Z., Cao, J., Xu, J., Wang, S., Cui, Y., Wang, Q., Chen, Y., Yin, Y., et al. (2024) · Cell Reports · doi:10.1016/j.celrep.2024.114857 · Cited by 41

Structure of the native γ-tubulin ring complex capping spindle microtubules

(2024) · doi:10.1038/s41594-024-01281-y · Cited by 38

Cryo-electron tomography pipeline for plasma membranes

Sun, W. W., Michalak, D. J., Sochacki, K. A., Kunamaneni, P., Alfonzo-Méndez, M. A., Arnold, A. M., Strub, M.-P., Hinshaw, J. E., & Taraska, J. W. (2025) · Nature Communications · doi:10.1038/s41467-025-56045-z · Cited by 35

Mouse α-synuclein fibrils are structurally and functionally distinct from human fibrils associated with Lewy body diseases

Sokratian, A., Zhou, Y., Tatli, M., Burbidge, K. J., Xu, E., Viverette, E., Donzelli, S., Duda, A. M., Yuan, Y., Li, H., et al. (2024) · Science Advances · doi:10.1126/sciadv.adq3539 · Cited by 32

The kidney slit diaphragm resembles a fishnet

Birtasu, A. N., Wieland, K., Ermel, U. H., Arghittu, S. M., Manger, S., Kocylowski, M. K., Fakler, B., Scheffer, M. P., Covino, R., Grahammer, F., et al. (2025) · Kidney International · doi:10.1016/j.kint.2025.08.028 · Cited by 32

The structural basis for RNA slicing by human Argonaute2

Mohamed, A. A., Wang, P. Y., Bartel, D. P., & Vos, S. M. (2025) · Cell Reports · doi:10.1016/j.celrep.2024.115166 · Cited by 32

Structural insights into S-lignin O-demethylation via a rare class of heme peroxygenase enzymes

Harlington, A. C., Das, T., Shearwin, K. E., Bell, S. G., & Whelan, F. (2025) · Nature Communications · doi:10.1038/s41467-025-57129-6 · Cited by 28

The role of metabolism in shaping enzyme structures over 400 million years

(2025) · doi:10.1038/s41586-025-09205-6 · Cited by 28

Viro3D: a comprehensive database of virus protein structure predictions

(2025) · doi:10.1038/s44320-025-00147-9 · Cited by 28

Preclinical development of a stabilized RH5 virus-like particle vaccine that induces improved antimalarial antibodies

King, L. D. W., Pulido, D., Barrett, J. R., Davies, H., Quinkert, D., Lias, A. M., Silk, S. E., Pattinson, D. J., Diouf, A., Williams, B. G., et al. (2024) · Cell Reports Medicine · doi:10.1016/j.xcrm.2024.101654 · Cited by 27

Repurposing Type I-A CRISPR-Cas3 for a robust diagnosis of human papillomavirus (HPV)

Hu, T., Ji, Q., Ke, X., Zhou, H., Zhang, S., Ma, S., Yu, C., Ju, W., Lu, M., Lin, Y., et al. (2024) · Communications Biology · doi:10.1038/s42003-024-06537-3 · Cited by 24

Polymerization of ZBTB transcription factors regulates chromatin occupancy

Park, P. M. C., Park, J., Brown, J., Hunkeler, M., Roy Burman, S. S., Donovan, K. A., Yoon, H., Nowak, R. P., Słabicki, M., Ebert, B. L., et al. (2024) · Molecular Cell · doi:10.1016/j.molcel.2024.06.010 · Cited by 22

Afadin mediates cadherin-catenin complex clustering on F-actin linked to cooperative binding and filament curvature

Gong, R., Reynolds, M. J., Sun, X., & Alushin, G. M. (2025) · Science Advances · doi:10.1126/sciadv.adu0989 · Cited by 21

Prevalence of loss-of-function, gain-of-function and dominant-negative mechanisms across genetic disease phenotypes

Badonyi, M., & Marsh, J. A. (2025) · Nature Communications · doi:10.1038/s41467-025-63234-3 · Cited by 19

Tubulin acetyltransferases access and modify the microtubule luminal K40 residue through anchors in taxane-binding pockets

Luo, J., Lam, W. H., Yu, D., Chao, V. C., Zopfi, M. N., Khoo, C. J., Zhao, C., Yan, S., Liu, Z., Li, X. D., et al. (2025) · Nature Structural & Molecular Biology · doi:10.1038/s41594-024-01406-3 · Cited by 18

Repeated duplications and losses shaped SMC complex evolution from archaeal ancestors to modern eukaryotes

van Hooff, J. J. E., Raas, M. W. D., Tromer, E. C., & Eme, L. (2025) · Cell Reports · doi:10.1016/j.celrep.2025.115855 · Cited by 18

Hydrolysis-deficient mosaic microtubules as faithful mimics of the GTP cap

Estévez-Gallego, J., Blum, T. B., Ruhnow, F., Gili, M., Speroni, S., García-Castellanos, R., Steinmetz, M. O., & Surrey, T. (2025) · Nature Communications · doi:10.1038/s41467-025-57555-6 · Cited by 17

Shigella effector IpaH1.4 subverts host E3 ligase RNF213 to evade antibacterial immunity

Zhou, X., Zhang, H., Wang, Y., Wang, D., Lin, Z., Zhang, Y., Tang, Y., Liu, J., Yao, Y.-F., Zhang, Y., et al. (2025) · Nature Communications · doi:10.1038/s41467-025-58432-y · Cited by 17

Generative artificial intelligence performs rudimentary structural biology modeling

Ille, A. M., Markosian, C., Burley, S. K., Mathews, M. B., Pasqualini, R., & Arap, W. (2024) · Scientific Reports · doi:10.1038/s41598-024-69021-2 · Cited by 16

The vibriophage-encoded inhibitor OrbA abrogates BREX-mediated defense through the ATPase BrxC

Oshiro, R. T., Dunham, D. T., & Seed, K. D. (2024) · Journal of Bacteriology · doi:10.1128/jb.00206-24 · Cited by 15

Spatial constraints drive amylosome-mediated resistant starch degradation by Ruminococcus bromii in the human colon

Wimmer, B. H., Moraïs, S., Amit, I., Tovar-Herrera, O., Tatli, M., Trautwein-Schult, A., Pfister, B., Zalk, R., Tödtli, P., Simoni, S., et al. (2025) · Nature Communications · doi:10.1038/s41467-025-65800-1 · Cited by 15

The conserved HIV-1 spacer peptide 2 triggers matrix lattice maturation

(2025) · doi:10.1038/s41586-025-08624-9 · Cited by 14

Structural insights into the human P2X1 receptor and ligand interactions

Bennetts, F. M., Venugopal, H., Glukhova, A., Mobbs, J. I., Ventura, S., & Thal, D. M. (2024) · Nature Communications · doi:10.1038/s41467-024-52776-7 · Cited by 14

Synergistic activation of the human phosphate exporter XPR1 by KIDINS220 and inositol pyrophosphate

Zuo, P., Wang, W., Dai, Z., Zheng, J., Yu, S., Wang, G., Yin, Y., Liang, L., & Yin, Y. (2025) · Nature Communications · doi:10.1038/s41467-025-58200-y · Cited by 13

Capturing ribosomal structures in cellular extracts with cryoPRISM: A purification-free cryoEM approach reveals novel structural states

May, M. B., Lopez-Perez, G. S., & Davis, J. H. (2026) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2521210123 · Cited by 13

Structure of a membrane tethering complex incorporating multiple SNAREs

DAmico, K. A., Stanton, A. E., Shirkey, J. D., Travis, S. M., Jeffrey, P. D., & Hughson, F. M. (2024) · Nature Structural & Molecular Biology · doi:10.1038/s41594-023-01164-8 · Cited by 13

Variant scoring tools for deep mutational scanning

Çubuk, H., Jin, X., Phipson, B., Marsh, J. A., & Rubin, A. F. (2025) · Molecular Systems Biology · doi:10.1038/s44320-025-00137-x · Cited by 13

Archaeal type six secretion system mediates contact-dependent antagonism

Zachs, T., Malit, J. J. L., Xu, J., Schürch, A., Sivabalasarma, S., Nußbaum, P., Albers, S.-V., & Pilhofer, M. (2024) · Science Advances · doi:10.1126/sciadv.adp7088 · Cited by 12

ABCFold: easier running and comparison of AlphaFold 3, Boltz-1, and Chai-1

Elliott, L. G., Simpkin, A. J., & Rigden, D. J. (2024) · Bioinformatics Advances · doi:10.1093/bioadv/vbaf153 · Cited by 12

Genomic signatures associated with the evolutionary loss of egg yolk in parasitoid wasps

Zhao, X., Liu, Y., Yuan, B., Cao, Z., Yang, Y., He, C., Chan, K. C., Xiao, S., Lin, H., Fang, Q., et al. (2025) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2422292122 · Cited by 12

A conserved mechanism for the retrieval of polyubiquitinated proteins from cilia

Lange, S. M., Bennett, J. A., Eisert, R. J., & Brown, A. (2025) · Cell · doi:10.1016/j.cell.2025.07.043 · Cited by 11

Mechanistic basis of temperature adaptation in microtubule dynamics across frog species

Troman, L., de Gaulejac, E., Biswas, A., Stiens, J., Kuropka, B., Moores, C. A., & Reber, S. (2025) · Current Biology · doi:10.1016/j.cub.2024.12.022 · Cited by 11

Deciphering the RNA-binding protein network during endosomal mRNA transport

Devan, S.-K., Shanmugasundaram, S., Müntjes, K., Postma, J., Smits, S. H. J., Altegoer, F., & Feldbrügge, M. (2024) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2404091121 · Cited by 11

An NADH-controlled gatekeeper of ATP synthase

Schildhauer, F., Ryl, P. S. J., Lauer, S. M., Lenz, S., Barlas, A. B., Ouzounidis, V. R., Jeffrey, K., Marcu, D.-C., O’Reilly, F. J., Graziadei, A., et al. (2025) · Molecular Cell · doi:10.1016/j.molcel.2025.06.007 · Cited by 11

The structure of the Orm2-containing serine palmitoyltransferase complex reveals distinct inhibitory potentials of yeast Orm proteins

Körner, C., Schäfer, J.-H., Esch, B. M., Parey, K., Walter, S., Teis, D., Januliene, D., Schmidt, O., Moeller, A., & Fröhlich, F. (2024) · Cell Reports · doi:10.1016/j.celrep.2024.114627 · Cited by 10

Cysteine Rich Intestinal Protein 2 is a copper-responsive regulator of skeletal muscle differentiation and metal homeostasis

Verdejo-Torres, O., Klein, D. C., Novoa-Aponte, L., Carrazco-Carrillo, J., Bonilla-Pinto, D., Rivera, A., Bakhshian, A., Fitisemanu, F. M., Jiménez-González, M. L., Flinn, L., et al. (2024) · PLOS Genetics · doi:10.1371/journal.pgen.1011495 · Cited by 10

Conformational landscapes of a class I ribonucleotide reductase complex during turnover reveal intrinsic dynamics and asymmetry

(2025) · doi:10.1038/s41467-025-57735-4 · Cited by 10

In situ structural mechanism of epothilone-B-induced CNS axon regeneration

Bodakuntla, S., Taira, K., Yamada, Y., Alvarez-Brecht, P., Cada, A. K., Basnet, N., Zhang, R., Martinez-Sanchez, A., Biertümpfel, C., & Mizuno, N. (2025) · Nature · doi:10.1038/s41586-025-09654-z · Cited by 9

High-resolution real-space reconstruction of cryo-EM structures using a neural field network

Huang, Y., Zhu, C., Yang, X., & Liu, M. (2024) · Nature Machine Intelligence · doi:10.1038/s42256-024-00870-2 · Cited by 9

Burkholderia pseudomallei Complex Subunit and Glycoconjugate Vaccines and Their Potential to Elicit Cross-Protection to Burkholderia cepacia Complex

Badten, A. J., & Torres, A. G. (2024) · Vaccines · doi:10.3390/vaccines12030313 · Cited by 8

Microtubules in the axon are GDP bound but adopt a stable GTP-like expanded state

Zehr, E. A., Sun, S., Sarbanes, S. L., & Roll-Mecak, A. (2026) · Nature Structural & Molecular Biology · doi:10.1038/s41594-026-01787-7 · Cited by 8

Evolutionary origins of archaeal and eukaryotic RNA-guided RNA modification in bacterial IS110 transposons

Vaysset, H., Meers, C., Cury, J., Bernheim, A., & Sternberg, S. H. (2025) · Nature Microbiology · doi:10.1038/s41564-024-01889-2 · Cited by 8

Architecture remodeling activates the HerA-DUF anti-phage defense system

(2025) · doi:10.1016/j.molcel.2025.02.001 · Cited by 8

De novo design of a fusion protein tool for GPCR research

(2025) · doi:10.1073/pnas.2422360122 · Cited by 8

Likelihood-based interactive local docking into cryo-EM maps in ChimeraX

(2024) · doi:10.1107/s2059798324006776 · Cited by 8

Scavenger receptor CD163 multimerises to allow uptake of diverse ligands

Zhou, R. X., & Higgins, M. K. (2025) · Nature Communications · doi:10.1038/s41467-025-62054-9 · Cited by 7

An allosteric network governs Tom70 conformational dynamics to coordinate mitochondrial import

Bachochin, M. J., McGuire, K. L., Cook, B. D., Ye, Q., Silletti, S., Corbett, K. D., Komives, E. A., & Herzik, M. A. (2026) · Structure · doi:10.1016/j.str.2025.11.011 · Cited by 7

Substrate recruitment via eIF2γ enhances catalytic efficiency of a holophosphatase that terminates the integrated stress response

Yan, Y., Shetty, M., Harding, H. P., George, G., Zyryanova, A., Labbé, K., Mafi, A., Hao, Q., Sidrauski, C., & Ron, D. (2024) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2320013121 · Cited by 7

AcrVIB1 inhibits CRISPR-Cas13b immunity by promoting unproductive crRNA binding accessible to RNase attack

(2025) · doi:10.1016/j.molcel.2025.01.020 · Cited by 7

Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding

(2025) · doi:10.1038/s42256-025-01059-x · Cited by 7

Chimeric systems composed of swapped Tra subunits between distantly-related F plasmids reveal striking plasticity among type IV secretion machines

(2024) · doi:10.1371/journal.pgen.1011088 · Cited by 7

Autorepression of yeast Hsp70 cochaperones by intramolecular interactions involving their J-domains

Rebeaud, M. E., Tiwari, S., Fauvet, B., Mohr, A., Goloubinoff, P., & De Los Rios, P. (2024) · Cell Stress and Chaperones · doi:10.1016/j.cstres.2024.03.008 · Cited by 6

Single-dose avian influenza A(H5N1) Clade 2.3.4.4b hemagglutinin–Matrix-M® nanoparticle vaccine induces neutralizing responses in nonhuman primates

Patel, N., Rehman, A., Trost, J. F., Flores, R., Longacre, Z., Guebre-Xabier, M., Zhou, H., Zhou, B., Jacobson, K., Jiang, D., et al. (2025) · Nature Communications · doi:10.1038/s41467-025-61964-y · Cited by 6

HaloClass: Salt-Tolerant Protein Classification with Protein Language Models

Narang, K., Nath, A., Hemstrom, W., & Chu, S. K. S. (2024) · The Protein Journal · doi:10.1007/s10930-024-10236-7 · Cited by 6

Robust Conformational Space Exploration of Cyclic Peptides by Combining Different MD Protocols and Force Fields

Murail, S., Sawmynaden, J., Zemirli, A., Jusot, M., Pietrucci, F., Chomilier, J., Tufféry, P., & Stratmann, D. (2025) · Journal of Chemical Theory and Computation · doi:10.1021/acs.jctc.5c01123 · Cited by 6

The carRS-ompV-virK operon of Vibrio cholerae senses antimicrobial peptides and activates the expression of multiple resistance systems

(2025) · doi:10.1038/s41598-025-98217-3 · Cited by 6

Broadly potent spike-specific human monoclonal antibodies inhibit SARS-CoV-2 Omicron sub-lineages

Walker, M. R., Underwood, A., Björnsson, K. H., Raghavan, S. S. R., Bassi, M. R., Binderup, A., Pham, L. V., Ramirez, S., Pinholt, M., Dagil, R., et al. (2024) · Communications Biology · doi:10.1038/s42003-024-06951-7 · Cited by 6

Lineage-specific evolution, structural diversity, and activity of R2 retrotransposons in animals

Hassan, N. T., Van Treeck, B., Rodríguez-Vargas, A., Sheppard, A. E., Collins, K., & Adelson, D. L. (2026) · Genome Biology · doi:10.1186/s13059-026-04073-3 · Cited by 5

Beyond the VSG layer: Exploring the role of intrinsic disorder in the invariant surface glycoproteins of African trypanosomes

Sülzen, H., Volkov, A. N., Geens, R., Zahedifard, F., Stijlemans, B., Zoltner, M., Magez, S., Sterckx, Y. G.-J., & Zoll, S. (2024) · PLOS Pathogens · doi:10.1371/journal.ppat.1012186 · Cited by 5

Metagenomic mining reveals novel viral histones in dsDNA viruses

Liu, Y., Hou, Z., Hao, W., Cui, S., Wang, H., & Liu, Y. (2025) · hLife · doi:10.1016/j.hlife.2025.02.005 · Cited by 5

Reduced cell-substrate adhesion formation promotes cell migration in Dictyostelium

Fierro Morales, J. C., A. Nguyen, T., Nepal, S., Redfearn, C., Gale, B. K., Titus, M. A., & Roh-Johnson, M. (2025) · Molecular Biology of the Cell · doi:10.1091/mbc.e25-05-0230 · Cited by 5

Structural basis for human chondroitin sulfate chain polymerization

(2025) · doi:10.1038/s41467-025-66787-5 · Cited by 5

Structural basis for Salmonella infection by two Microviridae phages

Hu, W., Liu, Z., Wei, Y., Bian, Q., Lan, W., Fan, C., Song, J., Sun, Q., Zhang, X., Liu, Y., et al. (2025) · Communications Biology · doi:10.1038/s42003-025-08595-7 · Cited by 4

Exploring the Structural Diversity and Evolution of the D1 Subunit of Photosystem II Using AlphaFold and Foldtree

Kim, T. D., Pretorius, D., Murray, J. W., & Cardona, T. (2025) · Physiologia Plantarum · doi:10.1111/ppl.70284 · Cited by 4

DprA recruits ComM to facilitate recombination during natural transformation in Gram-negative bacteria

Dalia, T. N., Machouri, M., Lacrouts, C., Fauconnet, Y., Guerois, R., Andreani, J., Radicella, J. P., & Dalia, A. B. (2025) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2421764122 · Cited by 4

Exploring Structure—Function Relationships in Engineered Receptor Performance Using Computational Structure Prediction

Corcoran, W. K., Cosio, A., Edelstein, H. I., & Leonard, J. N. (2025) · GEN Biotechnology · doi:10.1089/genbio.2024.0057 · Cited by 4

Interplay between SpaO variants shapes the architecture of the Salmonella type III secretion sorting platform

Soto, J. E., Wang, T., Galán, J. E., & Lara-Tejero, M. (2026) · mBio · doi:10.1128/mbio.00155-26 · Cited by 4

Genomic and structural insights into Jyvaskylavirus, the first giant virus isolated from Finland

Almeida, G. M. D. F., Arriaga, I., de Azevedo, B. L., Leppänen, M., Abrahão, J. S., Andreani, J., Zabeo, D., Ravantti, J. J., Abrescia, N. G., & Sundberg, L.-R. (2025) · eLife · doi:10.7554/elife.103492 · Cited by 4

Genetically encoded biosensor enabled mining, characterisation and engineering of aromatic acid MFS transporters

(2025) · doi:10.1186/s13036-025-00568-y · Cited by 4

Structural basis of auxin binding and transport by Arabidopsis thaliana AUX1

Jing, D., Kong, F., Lu, X., Huang, G., Huang, J., Wang, H., Shi, Y., & Wang, C. (2025) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2513424122 · Cited by 4

Chemical Protein Crosslinking-Coupled Mass Spectrometry Reveals Interaction of LHCI with LHCII and LHCSR3 in Chlamydomonas reinhardtii

Mosebach, L., Ozawa, S.-I., Younas, M., Xue, H., Scholz, M., Takahashi, Y., & Hippler, M. (2024) · Plants · doi:10.3390/plants13121632 · Cited by 4

AcrIF11 is a potent CRISPR-specific ADP-ribosyltransferase encoded by phage and plasmid

Chen, D. F., Roe, L. T., Yuping, L., Borges, A. L., Zhang, J. Y., Babbar, P., Maji, S., Stevens, M. G. V., Correy, G. J., Diolaiti, M. E., et al. (2025) · mBio · doi:10.1128/mbio.01698-25 · Cited by 4

Selecting genes for analysis using historically contingent progress: from RNA changes to protein–protein interactions

Lalit, F., & Jose, A. M. (2025) · Nucleic Acids Research · doi:10.1093/nar/gkae1246 · Cited by 3

CCDC32 stabilizes clathrin-coated pits and drives their invagination

Yang, Z., Yang, C., Huang, Z., Xu, P., Li, Y., Han, L., Peng, L., Wei, X., Pak, J. E., Svitkina, T., et al. (2026) · eLife · doi:10.7554/elife.107039.3 · Cited by 3

Computational screening of filamin mechanical binding proteins using AlphaFold2

(2025) · doi:10.1139/bcb-2025-0194 · Cited by 3

Exploring the structural assembly of rice ADP-glucose pyrophosphorylase subunits using MD simulation

Maharana, J., Hwang, S.-K., Singha, D. L., Panda, D., Singh, S., Okita, T. W., & Modi, M. K. (2024) · Journal of Molecular Graphics and Modelling · doi:10.1016/j.jmgm.2024.108761 · Cited by 3

Protein design of two-component tubular assemblies similar to cytoskeletons

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