mRNA vaccination boosts cross-variant neutralizing antibodies elicited by SARS-CoV-2 infection
Open accessPublished version of a preprint
Abstract
Boosterism could save lives: Postinfection immune protection against severe acute respiratory syndrome coronavirus 2 reinfection is not fully understood. It will be devastating if waves of new variants emerge that undermine natural immune protection. Stamatatos et al. investigated immune responsiveness 4 to 8 months after previously infected individuals were given a messenger RNA–based vaccine developed for the original Wuhan variant (see the Perspective by Crotty). Before vaccination, postinfection serum antibody neutralization responses to virus variants were variable and weak. Vaccination elevated postinfection serum-neutralizing capacity approximately 1000-fold against Wuhan-Hu-1 and other strains, and serum neutralization against the variant B.1.351 was enhanced. Although responses were relatively muted against the variant, they still showed characteristic memory responses. Vaccination with the Wuhan-Hu-1 variant may thus offer a valuable boost to protective responses against subsequent infection with variant viruses. Science , abg9175, this issue p. 1413 ; see also abj2258, p. 1392
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Written from the paper’s full text.
TL;DR
In previously SARS-CoV-2–infected donors, a single mRNA vaccine dose boosted neutralizing antibody titers ~1000-fold against Wuhan-Hu-1 and also increased cross-neutralization of B.1.351 variants, though titers against divergent variants were lower. The boost depended on preexisting RBD-specific immunological memory and was largely mediated by anti-RBD antibodies.
Key findings
- Before vaccination, postinfection serum neutralization was variable and weak: 12 of 15 previously infected donors (PIDs) neutralized Wuhan-Hu-1, 5 of 15 neutralized B.1.351, and 7 of 15 neutralized B.1.351–Δ242-243; only 3 and 1 donors, respectively, had ID50 titers above 100 against those variants.
- A single mRNA vaccine dose boosted median Wuhan-Hu-1 ID50 titers ~1000-fold in PIDs with preexisting RBD-specific IgG, while a second dose had no effect; one dose in PIDs elicited 4.5-fold higher IgG and 7.7-fold higher IgA titers than two doses in naïve donors (NDs).
- After one immunization in PIDs, median ID50 titers were ~3-fold lower against B.1.351, ~10-fold lower against B.1.351–Δ242-243, and 100-fold lower against SARS-CoV-1 than against Wuhan-Hu-1; neutralizing titers in PIDs after one dose were still 10-fold higher against Wuhan-Hu-1, 20-fold higher against B.1.351, 30-fold higher against B.1.351–Δ242-243, and 7-fold higher against SARS-CoV-1 than after two doses in NDs.
- Depletion of RBD-specific antibodies from postvaccination sera abrogated neutralization of Wuhan-Hu-1, indicating that most vaccine-elicited or boosted neutralizing antibodies target the RBD.
Methods
- Sera were collected from 15 donors with previously confirmed SARS-CoV-2 infection before and after one or two immunizations with Pfizer-BioNTech BNT162b2 or Moderna mRNA-1273, and from 13 uninfected donors after two vaccine doses; prevaccine PID samples were on average 202 days after symptom onset.
- Neutralization was measured with pseudoviruses expressing Wuhan-Hu-1 S, B.1.351 S, B.1.351–Δ242-243 S, or SARS-CoV-1 S; binding antibodies were measured by ELISA, and memory B cell and S-specific CD4+ T cell responses were assessed from PBMCs.
- Statistical comparisons used Wilcoxon signed rank tests for paired pre/post or variant comparisons and Wilcoxon rank sum tests between previously infected and uninfected donors.
Limitations
- Stated: the study used a pseudovirus neutralization assay; the authors note that authentic virus and pseudovirus neutralization correlate well, but absolute sensitivity may differ, though they anticipate relative differences will not vary.
- Stated: less-frequent B.1.351-associated mutations such as L18F, Δ244, L244H, and R246I were not examined and may further increase resistance to vaccine-elicited antibodies.
- Evident from the text: the sample was small (15 PIDs and 13 NDs), and several experiments were performed once; correlates of protection for SARS-CoV-2 vaccines were not established.
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- Findingnone given
Before vaccination, postinfection serum antibody neutralization responses to virus variants were variable and weak.
“Before vaccination, postinfection serum antibody neutralization responses to virus variants were variable and weak.”
Quote in the paperSubstantial claim - Findingown data
Serum neutralization against the variant B.1.351 was enhanced by vaccination.
“serum neutralization against the variant B.1.351 was enhanced”
Quote in the paperSubstantial claim - Findingown data
Vaccination elevated postinfection serum-neutralizing capacity approximately 1000-fold against Wuhan-Hu-1 and other strains.
“Vaccination elevated postinfection serum-neutralizing capacity approximately 1000-fold against Wuhan-Hu-1 and other strains”
Quote in the paperSubstantial claim - Findingown data
The anti-NTD CV1 mAb was unable to neutralize either B.1.351 variant.
“By contrast, the anti-NTD CV1 mAb was unable to neutralize either B.1.351 variant (Fig. 1D).”
Quote in the paperNot a substantial claim - Findingown data
Across all PIDs, there was a 200-fold increase in median RBD-specific IgA titers after vaccination.
“Across all PIDs, there was a 200-fold increase in median RBD-specific IgA titers after vaccination (Fig. 2B).”
Quote in the paperNot a substantial claim
- Findingown data
Sera from only one PID showed very weak neutralizing activity toward SARS-CoV-1 before vaccination.
“sera from only one PID showed very weak neutralizing activity toward SARS-CoV-1 before vaccination (Fig. 3, D and E, and fig. S7).”
Quote in the paperNot a substantial claim - Findingown data
The B.1.351 variants tested here are more resistant to neutralization by mAbs isolated from subjects infected by viral variants from early in the pandemic.
“Collectively, these data indicate that the B.1.351 variants tested here are more resistant to neutralization by mAbs isolated from subjects infected by viral variants from early in the pandemic.”
Quote in the paperSubstantial claim - Findingown data
The nonneutralizing prevaccine sera were from the three asymptomatic PIDs who had low or undetectable anti-RBD IgG titers.
“The nonneutralizing sera were from the three asymptomatic PIDs who had low or undetectable anti-RBD IgG titers (Fig. 3A, dashed lines, and fig. S4).”
Quote in the paperNot a substantial claim - Findingown data
The median ID80 values were lower for the B.1.351 and B.1.351-Δ242-243 variants compared with the Wuhan-Hu-1 variant.
“The median ID80 values were also lower for the B.1.351 and B.1.351–Δ242-243 variants compared with the Wuhan-Hu-1 variant (fig. S7A).”
Quote in the paperNot a substantial claim - Findingown data
In the two PIDs lacking RBD-specific IgG titers before vaccination, the first vaccine dose elicited lower neutralizing titers (ID50 = ~30 in donor L and ~200 in donor M).
“In the two PIDs lacking RBD-specific IgG titers before vaccination, the first vaccine dose elicited lower neutralizing titers (ID50 = ~30 in donor L and ~200 in donor M; Fig. 3A).”
Quote in the paperSubstantial claim - Findingown data
Prevaccine sera from the NDs were nonneutralizing.
“Prevaccine sera from the NDs were also nonneutralizing (fig. S5).”
Quote in the paperNot a substantial claim - Findingown data
Vaccine-elicited antibody responses also neutralized SARS-CoV-1 but with much lower potencies.
“Moreover, vaccine-elicited antibody responses also neutralized SARS-CoV-1 but with much lower potencies.”
Quote in the paperNot a substantial claim - Findingown data
A single immunization did not elicit nAbs against the B.1.351 variants or SARS-CoV-1 in the two asymptomatic donors who lacked RBD-specific IgG memory.
“A single immunization did not elicit nAbs against the B.1.351 variants or SARS-CoV-1 in the two asymptomatic donors who lacked RBD-specific IgG memory (donor L and M; Fig. 3, A to D, and Fig. 3E, open circles).”
Quote in the paperSubstantial claim - Findingown data
In most of the previously infected vaccinees, the anti-B.1.351-Δ242-243 neutralizing titers were comparable to those against the vaccine-matched Wuhan-Hu-1 in uninfected vaccinees.
“In most of the previously infected vaccinees, the anti–B.1.351–Δ242-243 neutralizing titers were comparable to those against the vaccine-matched Wuhan-Hu-1 in uninfected vaccinees.”
Quote in the paperSubstantial claim - Findingown data
The neutralization potency of mAb CV30 was ~10-fold weaker toward both B.1.351 variants.
“The neutralization potency of this mAb was ~10-fold weaker toward both B.1.351 variants (Fig. 1A).”
Quote in the paperNot a substantial claim - Findingown data
In PIDs, a concomitant increase in RBD- and S-specific IgG+ memory B cell frequencies took place after vaccination.
“In PIDs, a concomitant increase in RBD- (Fig. 2D) and S-specific IgG+ (Fig. 2E) memory B cell frequencies took place after vaccination.”
Quote in the paperSubstantial claim - Findingown data
In the 13 PIDs with RBD-specific IgG antibodies before vaccination, a single dose of either vaccine boosted these titers ~500-fold.
“In the 13 PIDs with RBD-specific IgG antibodies before vaccination, a single dose of either vaccine boosted these titers ~500-fold (Fig. 2A).”
Quote in the paperSubstantial claim - Findingown data
RBD-specific antibody depletion abrogated serum neutralization of Wuhan-Hu-1 virus.
“This depletion abrogated serum neutralization of Wuhan-Hu-1 virus (Fig. 4, C and F)”
Quote in the paperSubstantial claim - Findingown data
In the NDs, two doses of the vaccine elicited ID50 titers that were ~10- and 5-fold lower than those elicited by one or two doses in the PIDs, respectively.
“In the NDs, two doses of the vaccine elicited ID50 titers that were ~10- and 5-fold lower than those elicited by one or two doses in the PIDs, respectively (Fig. 3A and fig. S6).”
Quote in the paperSubstantial claim - Findingown data
In PIDs, a single vaccine dose elicited 4.5-fold higher IgG and 7.7-fold higher IgA titers compared with two vaccinations in NDs.
“Overall, in PIDs, a single vaccine dose elicited 4.5-fold higher IgG and 7.7-fold higher IgA titers compared with two vaccinations in NDs.”
Quote in the paperSubstantial claim - Findingown data
Vaccination induced S-specific CD4+ T cell responses.
“Vaccination also induced S-specific CD4+ T cell responses (Fig. 2G).”
Quote in the paperNot a substantial claim - Findingown data
The median ID50 of the prevaccine sera against the Wuhan-Hu-1 variant was significantly higher than that against B.1.351 or B.1.351-Δ242-243.
“The median ID50 of the prevaccine sera against the Wuhan-Hu-1 variant was significantly higher than that against B.1.351 or B.1.351–Δ242-243 (Fig. 3E).”
Quote in the paperSubstantial claim - Findingown data
The non-VH3-53 mAb CV3-1 was three- to fourfold less potent against the B.1.351 variants.
“Similarly, the non–VH3-53 mAb CV3-1 was three- to fourfold less potent against the B.1.351 variants (Fig. 1B)”
Quote in the paperNot a substantial claim - Findingown data
The B.1.351 and B.1.351-Δ242-243 variants contain three RBD mutations that affect the neutralization potency of anti-RBD mAbs.
“The B.1.351 and B.1.351–Δ242-243 variants contain three RBD mutations that affect the neutralization potency of anti-RBD mAbs (Fig. 1).”
Quote in the paperNot a substantial claim - Findingown data
RBD-specific antibody depletion efficiently removed RBD-specific but not anti-S2P-specific antibodies from sera.
“This approach efficiently removed RBD-specific (Fig. 4, A and C) but not anti-S2P–specific antibodies from sera, as measured by enzyme-linked immunosorbent assay (ELISA) (Fig. 4, B and D).”
Quote in the paperSubstantial claim - Findingown data
CV2-75 was modestly less effective against the B.1.351 variants.
“whereas CV2-75 was modestly less effective (Fig. 1C).”
Quote in the paperNot a substantial claim - Findingown data
A single immunization boosted the nAb titers against all three SARS-CoV-2 variants and SARS-CoV-1 in 13 of 15 PIDs.
“A single immunization boosted the nAb titers against all three SARS-CoV-2 variants and SARS-CoV-1 in 13 of 15 PIDs (Fig. 3, A to D)”
Quote in the paperSubstantial claim - Findingown data
Sera from 12 of 15 PIDs sampled before vaccination neutralized the Wuhan-Hu-1 SARS-CoV-2 variant.
“Sera from 12 of 15 PIDs sampled before vaccination neutralized the Wuhan-Hu-1 SARS-CoV-2 variant (Fig. 3A and fig. S4).”
Quote in the paperNot a substantial claim - Findingown data
A second dose administered 3 to 4 weeks after the first did not further boost neutralizing titers in PIDs who have clear evidence of RBD-directed immunological memory before vaccination.
“The observation that a second dose administered 3 to 4 weeks after the first did not further boost neutralizing titers in PIDs who have clear evidence of RBD-directed immunological memory before vaccination suggests that the second dose of an mRNA vaccine could be delayed in some persons who have previously been infected with SARS-CoV-2.”
Quote in the paperSubstantial claim - Interpretationreasoning
Vaccination with the Wuhan-Hu-1 variant may offer a valuable boost to protective responses against subsequent infection with variant viruses.
“Vaccination with the Wuhan-Hu-1 variant may thus offer a valuable boost to protective responses against subsequent infection with variant viruses.”
Quote in the paperSubstantial claim - Premisecitation
The two mRNA vaccines elicit nAbs.
“and elicit nAbs (48, 49).”
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- Interpretationcitation
The NTD region itself does not appear to be the target of cross-nAbs elicited by infection or vaccination.
“By contrast, the NTD region itself, which appears to tolerate antigenic variation in SARS-CoV-2 and other coronaviruses (50, 52, 55, 85), does not appear to be the target of cross-nAbs elicited by infection or vaccination.”
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- Interpretationreasoning
NTD mutations can modulate the sensitivity of emerging variants to anti-RBD nAbs.
“Combined with the observation that the vaccines elicited nAb responses that are less potent against the B.1.351 variant with the Δ242-243 deletion in the NTD, this suggests that NTD mutations can modulate the sensitivity of emerging variants to anti-RBD nAbs.”
Quote in the paperSubstantial claim - Interpretationown data
Most nAbs elicited or boosted by vaccination target the RBD.
“which suggests that most nAbs elicited or boosted by vaccination target this subdomain.”
Quote in the paperSubstantial claim - Premisecitation
These titers were associated with 95% protection from COVID-19 in phase 3 trials.
“This is notable, as these titers were associated with 95% protection from COVID-19 in phase 3 trials (44, 46, 48, 49).”
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- cites [48] L. A. Jackson, E. J. Anderson, N. G. Rouphael, P. C. Roberts, M. Makhene, R. N. Coler, M. P. McCullough, J. D. Chappell, M. R. Denison, L. J. Stevens, A. J. Pruijssers, A. McDermott, B. Flach, N. A. Doria-Rose, K. S. Corbett, K. M. Morabito, S. O’Dell, S. D. Schmidt, P. A. Swanson 2nd, M. Padilla, J. R. Mascola, K. M. Neuzil, H. Bennett, W. Sun, E. Peters, M. Makowski, J. Albert, K. Cross, W. Buchanan, R. Pikaart-Tautges, J. E. Ledgerwood, B. S. Graham, J. H. Beigel, mRNA-1273 Study Group, An mRNA Vaccine against SARS-CoV-2—Preliminary Report. N. Engl. J. Med. 383, 1920– 1931 (2020). 10.1056/N source
Not checked in the free run.
- cites [49] E. E. Walsh, R. W. Frenck Jr.., A. R. Falsey, N. Kitchin, J. Absalon, A. Gurtman, S. Lockhart, K. Neuzil, M. J. Mulligan, R. Bailey, K. A. Swanson, P. Li, K. Koury, W. Kalina, D. Cooper, C. Fontes-Garfias, P.-Y. Shi, Ö. Türeci, K. R. Tompkins, K. E. Lyke, V. Raabe, P. R. Dormitzer, K. U. Jansen, U. Şahin, W. C. Gruber, Safety and Immunogenicity of Two RNA-Based Covid-19 Vaccine Candidates. N. Engl. J. Med. 383, 2439– 2450 (2020). 10.1056/NEJMoa2027906 33053279 PMC7583697 source
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- Interpretationown data
Preexisting anti-RBD IgG memory appears to be important for a robust recall response to vaccination.
“Moreover, preexisting anti-RBD IgG memory appears to be important for a robust recall response to vaccination.”
Quote in the paperSubstantial claim - Interpretationown data
The cross-nAb responses generated after immunization in previously infected subjects are a result of anti-RBD antibodies.
“Here, we show that the cross-nAb responses generated after immunization in previously infected subjects are a result of anti-RBD antibodies.”
Quote in the paperSubstantial claim - Interpretationown data
In PIDs who generate adequate immunological memory to the RBD, a single vaccine dose elicits an anamnestic response resulting in RBD-binding and nAb responses that are superior to a two-dose regimen in uninfected donors.
“Collectively, these data indicate that in PIDs who generate adequate immunological memory to the RBD, a single vaccine dose elicits an anamnestic response resulting in RBD-binding and nAb responses that are superior to a two-dose regimen in uninfected donors.”
Quote in the paperSubstantial claim - Premisecitation
Several studies have shown that authentic virus and pseudovirus neutralization correlate quite well.
“Several studies have now shown that authentic virus and pseudovirus neutralization correlate quite well (16, 86, 87).”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [16] T. F. Rogers, F. Zhao, D. Huang, N. Beutler, A. Burns, W. T. He, O. Limbo, C. Smith, G. Song, J. Woehl, L. Yang, R. K. Abbott, S. Callaghan, E. Garcia, J. Hurtado, M. Parren, L. Peng, S. Ramirez, J. Ricketts, M. J. Ricciardi, S. A. Rawlings, N. C. Wu, M. Yuan, D. M. Smith, D. Nemazee, J. R. Teijaro, J. E. Voss, I. A. Wilson, R. Andrabi, B. Briney, E. Landais, D. Sok, J. G. Jardine, D. R. Burton, Isolation of potent SARS-CoV-2 neutralizing antibodies and protection from disease in a small animal model. Science 369, 956– 963 (2020). 10.1126/science.abc7520 32540903 PMC7299280 source
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- cites [86] D. Pinto, Y.-J. Park, M. Beltramello, A. C. Walls, M. A. Tortorici, S. Bianchi, S. Jaconi, K. Culap, F. Zatta, A. De Marco, A. Peter, B. Guarino, R. Spreafico, E. Cameroni, J. B. Case, R. E. Chen, C. Havenar-Daughton, G. Snell, A. Telenti, H. W. Virgin, A. Lanzavecchia, M. S. Diamond, K. Fink, D. Veesler, D. Corti, Cross-neutralization of SARS-CoV-2 by a human monoclonal SARS-CoV antibody. Nature 583, 290– 295 (2020). 10.1038/s41586-020-2349-y 32422645 source
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- cites [87] R. Yang, B. Huang, R. A, W. Li, W. Wang, Y. Deng, W. Tan, Development and effectiveness of pseudotyped SARS-CoV-2 system as determined by neutralizing efficiency and entry inhibition test in vitro. Biosaf. Health 2, 226– 231 (2020). 10.1016/j.bsheal.2020.08.004 32864605 PMC7442068 source
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- Premisecitation
Studies in nonhuman primates indicate that even low titers of nAbs are sufficient to prevent experimental SARS-CoV-2 infection, particularly if CD8+ T cell responses are mounted.
“studies in nonhuman primates indicate that even low titers of nAbs are sufficient to prevent experimental SARS-CoV-2 infection, particularly if CD8+ T cell responses are mounted (18).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [18] K. McMahan, J. Yu, N. B. Mercado, C. Loos, L. H. Tostanoski, A. Chandrashekar, J. Liu, L. Peter, C. Atyeo, A. Zhu, E. A. Bondzie, G. Dagotto, M. S. Gebre, C. Jacob-Dolan, Z. Li, F. Nampanya, S. Patel, L. Pessaint, A. Van Ry, K. Blade, J. Yalley-Ogunro, M. Cabus, R. Brown, A. Cook, E. Teow, H. Andersen, M. G. Lewis, D. A. Lauffenburger, G. Alter, D. H. Barouch, Correlates of protection against SARS-CoV-2 in rhesus macaques. Nature 590, 630– 634 (2021). 10.1038/s41586-020-03041-6 33276369 PMC7906955 source
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- Interpretationcitation
Although the absolute sensitivity of the authentic and pseudovirus assays may differ, the relative differences reported here will not vary between the two.
“Although the absolute sensitivity of the authentic and pseudovirus assays may differ, we anticipate that the relative differences we report here will not vary between the two.”
Quote in the paperSubstantial claim
- May combine two claims. 23
- Classified as probably not a substantial claim. 14
May combine two claims.
Findingown dataAlthough responses were relatively muted against the variant, they still showed characteristic memory responses.
“Although responses were relatively muted against the variant, they still showed characteristic memory responses.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe median ID50 titers after a single immunization were ~3-fold lower against B.1.351, ~10-fold lower against B.1.351-Δ242-243, and 100-fold lower against SARS-CoV-1 than against Wuhan-Hu-1.
“the median ID50 titers were ~3-fold lower against B.1.351, ~10-fold lower against B.1.351–Δ242-243, and 100-fold lower against SARS-CoV-1 than against Wuhan-Hu-1 (Fig. 3E).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataAs long as RBD-specific IgG+ memory B cell and antibody responses were generated during infection, a single immunization with either mRNA vaccine elicited a robust recall response that boosted the autologous neutralizing titers by ~1000-fold, and these antibody responses cross-neutralized the B.1.351 variants, but at lower titers.
“However, as long as RBD-specific IgG+ memory B cell and antibody responses were generated during infection, a single immunization with either mRNA vaccine elicited a robust recall response that boosted the autologous neutralizing titers by ~1000-fold, and these antibody responses cross-neutralized the B.1.351 variants, but at lower titers.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataBefore vaccination, 7 of 15 sera from PIDs neutralized B.1.351-Δ242-243, and only one had titers above 100.
“7 of 15 neutralized B.1.351–Δ242-243, and only one had titers above 100 (Fig. 3, C and E, and fig. S4).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe neutralizing titers elicited by a single immunization in PIDs were significantly higher than those elicited by two immunizations in NDs against all pseudoviruses tested-10-fold higher against Wuhan-Hu-1, 20-fold higher against B.1.351, 30-fold higher against B.1.351-Δ242-243, and 7-fold higher against SARS-CoV-1.
“The neutralizing titers elicited by a single immunization in PIDs were significantly higher than those elicited by two immunizations in NDs against all pseudoviruses tested—10-fold higher against Wuhan-Hu-1 (Fig. 3A), 20-fold higher against B.1.351 (Fig. 3B), 30-fold higher against B.1.351–Δ242-243 (Fig. 3C), and 7-fold higher against SARS-CoV-1 (Fig. 3D).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe two PIDs that lacked RBD-specific IgG titers before immunization also lacked RBD-specific IgG+ memory B cells and had lower frequencies of S-specific IgG+ memory B cells after vaccination.
“The two PIDs that lacked RBD-specific IgG titers before immunization (donors L and M) also lacked RBD-specific IgG+ memory B cells (Fig. 2D) and had lower frequencies of S-specific IgG+ memory B cells after vaccination.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataRBD-specific IgM titers were generally lower and were not significantly boosted in response to vaccination in PIDs.
“RBD-specific IgM titers were generally lower and were not significantly boosted in response to vaccination in PIDs (Fig. 2C).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataBefore vaccination, 5 of 15 sera from PIDs neutralized B.1.351, and only three had ID50 titers above 100.
“Before vaccination, 5 of 15 sera from PIDs neutralized B.1.351, and only three had ID50 titers above 100 (Fig. 3, B and E, and fig. S4)”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataVaccination induced an increase in the frequency of IgA+ but not IgM+ spike-specific memory B cells.
“an increase in the frequency of IgA+ (Fig. 2F) but not IgM+ spike-specific memory B cells was observed (fig. S3).”
Quote in the paperNot a substantial claimMay combine two claims.
FindingcitationSera from PIDs who experienced symptomatic SARS-CoV-2 infection and who had detectable anti-RBD IgG titers before vaccination displayed generally weak nAb titers against Wuhan-Hu-1 at 1 to 9 months after infection and lower or nonexistent titers against the B.1.351 variants.
“Similarly, sera from PIDs who experienced symptomatic SARS-CoV-2 infection and who had detectable anti-RBD IgG titers before vaccination displayed generally weak nAb titers against Wuhan-Hu-1 at 1 to 9 months after infection and lower or nonexistent titers against the B.1.351 variants, in agreement with another study (69).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [69] C. K. Wibmer, F. Ayres, T. Hermanus, M. Madzivhandila, P. Kgagudi, B. Oosthuysen, B. E. Lambson, T. de Oliveira, M. Vermeulen, K. van der Berg, T. Rossouw, M. Boswell, V. Ueckermann, S. Meiring, A. von Gottberg, C. Cohen, L. Morris, J. N. Bhiman, P. L. Moore, SARS-CoV-2 501Y.V2 escapes neutralization by South African COVID-19 donor plasma. Nat. Med. 27, 622– 625 (2021). 10.1038/s41591-021-01285-x 33654292 source
Not checked in the free run.
May combine two claims.
Findingown dataThe median half-maximal neutralizing titers (ID50) were boosted ~1000-fold after the first dose, whereas the second dose had no effect.
“the median half-maximal neutralizing titers [half-maximal inhibitory dilution (ID50)] were boosted ~1000-fold after the first dose, whereas the second dose had no effect (Fig. 3A).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataOnly two prevaccine PID sera achieved 80% neutralization of B.1.351, and only one achieved 80% neutralization of B.1.351-Δ242-243.
“Only two prevaccine PID sera achieved 80% neutralization of B.1.351, and only one achieved 80% neutralization of B.1.351–Δ242-243 (fig. S7A).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn NDs, two doses of either the Pfizer-BioNTech or Moderna vaccines elicited nAb titers against the vaccine-matched Wuhan-Hu-1, lower titers against B.1.351, and even lower titers against B.1.351-Δ242-243.
“The above results indicate that in NDs, two doses of either the Pfizer-BioNTech or Moderna vaccines elicited nAb titers against the vaccine-matched Wuhan-Hu-1, lower titers against B.1.351, and even lower titers against B.1.351–Δ242-243.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataOnly 8 of 13 vaccinated NDs were able to achieve 80% neutralization of B.1.351-Δ242-243, and none could achieve 80% neutralization of SARS-CoV-1.
“Only 8 of 13 vaccinated NDs were able to achieve 80% neutralization of B.1.351–Δ242-243, and none could achieve 80% neutralization of SARS-CoV-1 (fig. S7B).”
Quote in the paperSubstantial claimClassified as probably not a substantial claim.
PremisecitationNeutralizing antibodies are thought to be an important component of a protective immune response against SARS-CoV-2.
“neutralizing antibodies (nAbs) are thought to be an important component of a protective immune response against SARS-CoV-2 (14, 15).”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [14] D. S. Stephens, M. J. McElrath, COVID-19 and the Path to Immunity. JAMA 324, 1279– 1281 (2020). 10.1001/jama.2020.16656 32915201 PMC12177933 source
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- cites [15] K. P. O’Callaghan, A. M. Blatz, P. A. Offit, Developing a SARS-CoV-2 Vaccine at Warp Speed. JAMA 324, 437– 438 (2020). 10.1001/jama.2020.12190 32628244 source
Not checked in the free run.
May combine two claims.
PremisecitationPreexisting immunity to SARS-CoV-2 is associated with protection against reinfection in humans and in nonhuman primates.
“Preexisting immunity to SARS-CoV-2 is associated with protection against reinfection in humans (9–11) and in nonhuman primates (12, 13).”
Quote in the paperNot a substantial claim0 of 5 sources checked- cites [9] A. Addetia, K. H. D. Crawford, A. Dingens, H. Zhu, P. Roychoudhury, M.-L. Huang, K. R. Jerome, J. D. Bloom, A. L. Greninger, Neutralizing Antibodies Correlate with Protection from SARS-CoV-2 in Humans during a Fishery Vessel Outbreak with a High Attack Rate. J. Clin. Microbiol. 58, e02107-20 (2020). 10.1128/JCM.02107-20 32826322 PMC7587101 source
Not checked in the free run.
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Not checked in the free run.
- cites [11] S. F. Lumley, D. O’Donnell, N. E. Stoesser, P. C. Matthews, A. Howarth, S. B. Hatch, B. D. Marsden, S. Cox, T. James, F. Warren, L. J. Peck, T. G. Ritter, Z. de Toledo, L. Warren, D. Axten, R. J. Cornall, E. Y. Jones, D. I. Stuart, G. Screaton, D. Ebner, S. Hoosdally, M. Chand, D. W. Crook, A.-M. O’Donnell, C. P. Conlon, K. B. Pouwels, A. S. Walker, T. E. A. Peto, S. Hopkins, T. M. Walker, K. Jeffery, D. W. Eyre, Oxford University Hospitals Staff Testing Group, Antibody Status and Incidence of SARS-CoV-2 Infection in Health Care Workers. N. Engl. J. Med. 384, 533– 540 (2021). 10.1056/NEJMoa203 source
Not checked in the free run.
- cites [12] A. Chandrashekar, J. Liu, A. J. Martinot, K. McMahan, N. B. Mercado, L. Peter, L. H. Tostanoski, J. Yu, Z. Maliga, M. Nekorchuk, K. Busman-Sahay, M. Terry, L. M. Wrijil, S. Ducat, D. R. Martinez, C. Atyeo, S. Fischinger, J. S. Burke, M. D. Slein, L. Pessaint, A. Van Ry, J. Greenhouse, T. Taylor, K. Blade, A. Cook, B. Finneyfrock, R. Brown, E. Teow, J. Velasco, R. Zahn, F. Wegmann, P. Abbink, E. A. Bondzie, G. Dagotto, M. S. Gebre, X. He, C. Jacob-Dolan, N. Kordana, Z. Li, M. A. Lifton, S. H. Mahrokhian, L. F. Maxfield, R. Nityanandam, J. P. Nkolola, A. G. Schmidt, A. D. Miller, R. S. Baric, G. source
Not checked in the free run.
- cites [13] W. Deng, L. Bao, J. Liu, C. Xiao, J. Liu, J. Xue, Q. Lv, F. Qi, H. Gao, P. Yu, Y. Xu, Y. Qu, F. Li, Z. Xiang, H. Yu, S. Gong, M. Liu, G. Wang, S. Wang, Z. Song, Y. Liu, W. Zhao, Y. Han, L. Zhao, X. Liu, Q. Wei, C. Qin, Primary exposure to SARS-CoV-2 protects against reinfection in rhesus macaques. Science 369, 818– 823 (2020). 10.1126/science.abc5343 32616673 PMC7402625 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationThe two mRNA vaccines show >94% efficacy at preventing COVID-19 illness.
“show >94% efficacy at preventing COVID-19 illness (44–47)”
Quote in the paperNot a substantial claim0 of 4 sources checked- cites [44] L. R. Baden, H. M. El Sahly, B. Essink, K. Kotloff, S. Frey, R. Novak, D. Diemert, S. A. Spector, N. Rouphael, C. B. Creech, J. McGettigan, S. Khetan, N. Segall, J. Solis, A. Brosz, C. Fierro, H. Schwartz, K. Neuzil, L. Corey, P. Gilbert, H. Janes, D. Follmann, M. Marovich, J. Mascola, L. Polakowski, J. Ledgerwood, B. S. Graham, H. Bennett, R. Pajon, C. Knightly, B. Leav, W. Deng, H. Zhou, S. Han, M. Ivarsson, J. Miller, T. Zaks, COVE Study Group, Efficacy and Safety of the mRNA-1273 SARS-CoV-2 Vaccine. N. Engl. J. Med. 384, 403– 416 (2021). 10.1056/NEJMoa2035389 33378609 PMC7787219 source
Not checked in the free run.
- cites [45] K. S. Corbett, D. K. Edwards, S. R. Leist, O. M. Abiona, S. Boyoglu-Barnum, R. A. Gillespie, S. Himansu, A. Schäfer, C. T. Ziwawo, A. T. DiPiazza, K. H. Dinnon, S. M. Elbashir, C. A. Shaw, A. Woods, E. J. Fritch, D. R. Martinez, K. W. Bock, M. Minai, B. M. Nagata, G. B. Hutchinson, K. Wu, C. Henry, K. Bahl, D. Garcia-Dominguez, L. Ma, I. Renzi, W.-P. Kong, S. D. Schmidt, L. Wang, Y. Zhang, E. Phung, L. A. Chang, R. J. Loomis, N. E. Altaras, E. Narayanan, M. Metkar, V. Presnyak, C. Liu, M. K. Louder, W. Shi, K. Leung, E. S. Yang, A. West, K. L. Gully, L. J. Stevens, N. Wang, D. Wrapp, N. A. Dor source
Not checked in the free run.
- cites [46] F. P. Polack, S. J. Thomas, N. Kitchin, J. Absalon, A. Gurtman, S. Lockhart, J. L. Perez, G. Pérez Marc, E. D. Moreira, C. Zerbini, R. Bailey, K. A. Swanson, S. Roychoudhury, K. Koury, P. Li, W. V. Kalina, D. Cooper, R. W. Frenck Jr.., L. L. Hammitt, Ö. Türeci, H. Nell, A. Schaefer, S. Ünal, D. B. Tresnan, S. Mather, P. R. Dormitzer, U. Şahin, K. U. Jansen, W. C. Gruber, C4591001 Clinical Trial Group, Safety and Efficacy of the BNT162b2 mRNA Covid-19 Vaccine. N. Engl. J. Med. 383, 2603– 2615 (2020). 10.1056/NEJMoa2034577 33301246 PMC7745181 source
Not checked in the free run.
- cites [47] A. B. Vogel, I. Kanevsky, Y. Che, K. A. Swanson, A. Muik, M. Vormehr, L. M. Kranz, K. C. Walzer, S. Hein, A. Güler, J. Loschko, M. S. Maddur, K. Tompkins, J. Cole, B. G. Lui, T. Ziegenhals, A. Plaschke, D. Eisel, S. C. Dany, S. Fesser, S. Erbar, F. Bates, D. Schneider, B. Jesionek, B. Sänger, A.-K. Wallisch, Y. Feuchter, H. Junginger, S. A. Krumm, A. P. Heinen, P. Adams-Quack, J. Schlereth, C. Kröner, S. Hall-Ursone, K. Brasky, M. C. Griffor, S. Han, J. A. Lees, E. H. Mashalidis, P. V. Sahasrabudhe, C. Y. Tan, D. Pavliakova, G. Singh, C. Fontes-Garfias, M. Pride, I. L. Scully, T. Ciolino, J. O source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationNeutralizing mAbs that bind regions of the viral spike have also been identified.
“Neutralizing mAbs that bind regions of the viral spike have also been identified (24, 33, 38–42).”
Quote in the paperNot a substantial claim0 of 7 sources checked- cites [24] P. J. M. Brouwer, T. G. Caniels, K. van der Straten, J. L. Snitselaar, Y. Aldon, S. Bangaru, J. L. Torres, N. M. A. Okba, M. Claireaux, G. Kerster, A. E. H. Bentlage, M. M. van Haaren, D. Guerra, J. A. Burger, E. E. Schermer, K. D. Verheul, N. van der Velde, A. van der Kooi, J. van Schooten, M. J. van Breemen, T. P. L. Bijl, K. Sliepen, A. Aartse, R. Derking, I. Bontjer, N. A. Kootstra, W. J. Wiersinga, G. Vidarsson, B. L. Haagmans, A. B. Ward, G. J. de Bree, R. W. Sanders, M. J. van Gils, Potent neutralizing antibodies from COVID-19 patients define multiple targets of vulnerability. Science 3 source
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Not checked in the free run.
May combine two claims.
PremisecitationPassive transfer of nAbs limits respiratory tract infection and protects against infection in animal models.
“passive transfer of nAbs limits respiratory tract infection and protects against infection in animal models (16–20)”
Quote in the paperSubstantial claim0 of 5 sources checked- cites [16] T. F. Rogers, F. Zhao, D. Huang, N. Beutler, A. Burns, W. T. He, O. Limbo, C. Smith, G. Song, J. Woehl, L. Yang, R. K. Abbott, S. Callaghan, E. Garcia, J. Hurtado, M. Parren, L. Peng, S. Ramirez, J. Ricketts, M. J. Ricciardi, S. A. Rawlings, N. C. Wu, M. Yuan, D. M. Smith, D. Nemazee, J. R. Teijaro, J. E. Voss, I. A. Wilson, R. Andrabi, B. Briney, E. Landais, D. Sok, J. G. Jardine, D. R. Burton, Isolation of potent SARS-CoV-2 neutralizing antibodies and protection from disease in a small animal model. Science 369, 956– 963 (2020). 10.1126/science.abc7520 32540903 PMC7299280 source
Not checked in the free run.
- cites [17] S. J. Zost, P. Gilchuk, J. B. Case, E. Binshtein, R. E. Chen, J. P. Nkolola, A. Schäfer, J. X. Reidy, A. Trivette, R. S. Nargi, R. E. Sutton, N. Suryadevara, D. R. Martinez, L. E. Williamson, E. C. Chen, T. Jones, S. Day, L. Myers, A. O. Hassan, N. M. Kafai, E. S. Winkler, J. M. Fox, S. Shrihari, B. K. Mueller, J. Meiler, A. Chandrashekar, N. B. Mercado, J. J. Steinhardt, K. Ren, Y.-M. Loo, N. L. Kallewaard, B. T. McCune, S. P. Keeler, M. J. Holtzman, D. H. Barouch, L. E. Gralinski, R. S. Baric, L. B. Thackray, M. S. Diamond, R. H. Carnahan, J. E. Crowe Jr.,., Potently neutralizing and protect source
Not checked in the free run.
- cites [18] K. McMahan, J. Yu, N. B. Mercado, C. Loos, L. H. Tostanoski, A. Chandrashekar, J. Liu, L. Peter, C. Atyeo, A. Zhu, E. A. Bondzie, G. Dagotto, M. S. Gebre, C. Jacob-Dolan, Z. Li, F. Nampanya, S. Patel, L. Pessaint, A. Van Ry, K. Blade, J. Yalley-Ogunro, M. Cabus, R. Brown, A. Cook, E. Teow, H. Andersen, M. G. Lewis, D. A. Lauffenburger, G. Alter, D. H. Barouch, Correlates of protection against SARS-CoV-2 in rhesus macaques. Nature 590, 630– 634 (2021). 10.1038/s41586-020-03041-6 33276369 PMC7906955 source
Not checked in the free run.
- cites [19] A. Baum, D. Ajithdoss, R. Copin, A. Zhou, K. Lanza, N. Negron, M. Ni, Y. Wei, K. Mohammadi, B. Musser, G. S. Atwal, A. Oyejide, Y. Goez-Gazi, J. Dutton, E. Clemmons, H. M. Staples, C. Bartley, B. Klaffke, K. Alfson, M. Gazi, O. Gonzalez, E. Dick Jr.., R. Carrion Jr.., L. Pessaint, M. Porto, A. Cook, R. Brown, V. Ali, J. Greenhouse, T. Taylor, H. Andersen, M. G. Lewis, N. Stahl, A. J. Murphy, G. D. Yancopoulos, C. A. Kyratsous, REGN-COV2 antibodies prevent and treat SARS-CoV-2 infection in rhesus macaques and hamsters. Science 370, 1110– 1115 (2020). 10.1126/science.abe2402 33037066 PMC7857396 source
Not checked in the free run.
- cites [20] A. Schäfer, F. Muecksch, J. C. C. Lorenzi, S. R. Leist, M. Cipolla, S. Bournazos, F. Schmidt, R. M. Maison, A. Gazumyan, D. R. Martinez, R. S. Baric, D. F. Robbiani, T. Hatziioannou, J. V. Ravetch, P. D. Bieniasz, R. A. Bowen, M. C. Nussenzweig, T. P. Sheahan, Antibody potency, effector function, and combinations in protection and therapy for SARS-CoV-2 infection in vivo. J. Exp. Med. 218, e20201993 (2021). 10.1084/jem.20201993 33211088 PMC7673958 source
Not checked in the free run.
May combine two claims.
PremisecitationSARS-CoV-2 infection rapidly elicits nAbs that decline, but remain detectable, over several months.
“SARS-CoV-2 infection rapidly elicits nAbs (16, 21–24) that decline, but remain detectable, over several months (25–29).”
Quote in the paperNot a substantial claim0 of 10 sources checked- cites [16] T. F. Rogers, F. Zhao, D. Huang, N. Beutler, A. Burns, W. T. He, O. Limbo, C. Smith, G. Song, J. Woehl, L. Yang, R. K. Abbott, S. Callaghan, E. Garcia, J. Hurtado, M. Parren, L. Peng, S. Ramirez, J. Ricketts, M. J. Ricciardi, S. A. Rawlings, N. C. Wu, M. Yuan, D. M. Smith, D. Nemazee, J. R. Teijaro, J. E. Voss, I. A. Wilson, R. Andrabi, B. Briney, E. Landais, D. Sok, J. G. Jardine, D. R. Burton, Isolation of potent SARS-CoV-2 neutralizing antibodies and protection from disease in a small animal model. Science 369, 956– 963 (2020). 10.1126/science.abc7520 32540903 PMC7299280 source
Not checked in the free run.
- cites [21] M. S. Suthar, M. G. Zimmerman, R. C. Kauffman, G. Mantus, S. L. Linderman, W. H. Hudson, A. Vanderheiden, L. Nyhoff, C. W. Davis, O. Adekunle, M. Affer, M. Sherman, S. Reynolds, H. P. Verkerke, D. N. Alter, J. Guarner, J. Bryksin, M. C. Horwath, C. M. Arthur, N. Saakadze, G. H. Smith, S. Edupuganti, E. M. Scherer, K. Hellmeister, A. Cheng, J. A. Morales, A. S. Neish, S. R. Stowell, F. Frank, E. Ortlund, E. J. Anderson, V. D. Menachery, N. Rouphael, A. K. Mehta, D. S. Stephens, R. Ahmed, J. D. Roback, J. Wrammert, Rapid Generation of Neutralizing Antibody Responses in COVID-19 Patients. Cell Re source
Not checked in the free run.
- cites [22] E. Seydoux, L. J. Homad, A. J. MacCamy, K. R. Parks, N. K. Hurlburt, M. F. Jennewein, N. R. Akins, A. B. Stuart, Y.-H. Wan, J. Feng, R. E. Whaley, S. Singh, M. Boeckh, K. W. Cohen, M. J. McElrath, J. A. Englund, H. Y. Chu, M. Pancera, A. T. McGuire, L. Stamatatos, Analysis of a SARS-CoV-2-Infected Individual Reveals Development of Potent Neutralizing Antibodies with Limited Somatic Mutation. Immunity 53, 98– 105.e5 (2020). 10.1016/j.immuni.2020.06.001 32561270 PMC7276322 source
Not checked in the free run.
- cites [23] D. F. Robbiani, C. Gaebler, F. Muecksch, J. C. C. Lorenzi, Z. Wang, A. Cho, M. Agudelo, C. O. Barnes, A. Gazumyan, S. Finkin, T. Hägglöf, T. Y. Oliveira, C. Viant, A. Hurley, H.-H. Hoffmann, K. G. Millard, R. G. Kost, M. Cipolla, K. Gordon, F. Bianchini, S. T. Chen, V. Ramos, R. Patel, J. Dizon, I. Shimeliovich, P. Mendoza, H. Hartweger, L. Nogueira, M. Pack, J. Horowitz, F. Schmidt, Y. Weisblum, E. Michailidis, A. W. Ashbrook, E. Waltari, J. E. Pak, K. E. Huey-Tubman, N. Koranda, P. R. Hoffman, A. P. West Jr.., C. M. Rice, T. Hatziioannou, P. J. Bjorkman, P. D. Bieniasz, M. Caskey, M. C. Nuss source
Not checked in the free run.
- cites [24] P. J. M. Brouwer, T. G. Caniels, K. van der Straten, J. L. Snitselaar, Y. Aldon, S. Bangaru, J. L. Torres, N. M. A. Okba, M. Claireaux, G. Kerster, A. E. H. Bentlage, M. M. van Haaren, D. Guerra, J. A. Burger, E. E. Schermer, K. D. Verheul, N. van der Velde, A. van der Kooi, J. van Schooten, M. J. van Breemen, T. P. L. Bijl, K. Sliepen, A. Aartse, R. Derking, I. Bontjer, N. A. Kootstra, W. J. Wiersinga, G. Vidarsson, B. L. Haagmans, A. B. Ward, G. J. de Bree, R. W. Sanders, M. J. van Gils, Potent neutralizing antibodies from COVID-19 patients define multiple targets of vulnerability. Science 3 source
Not checked in the free run.
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Not checked in the free run.
- cites [27] C. Gaebler, Z. Wang, J. C. C. Lorenzi, F. Muecksch, S. Finkin, M. Tokuyama, A. Cho, M. Jankovic, D. Schaefer-Babajew, T. Y. Oliveira, M. Cipolla, C. Viant, C. O. Barnes, Y. Bram, G. Breton, T. Hägglöf, P. Mendoza, A. Hurley, M. Turroja, K. Gordon, K. G. Millard, V. Ramos, F. Schmidt, Y. Weisblum, D. Jha, M. Tankelevich, G. Martinez-Delgado, J. Yee, R. Patel, J. Dizon, C. Unson-O’Brien, I. Shimeliovich, D. F. Robbiani, Z. Zhao, A. Gazumyan, R. E. Schwartz, T. Hatziioannou, P. J. Bjorkman, S. Mehandru, P. D. Bieniasz, M. Caskey, M. C. Nussenzweig, Evolution of antibody immunity to SARS-CoV-2. Na source
Not checked in the free run.
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Not checked in the free run.
- cites [29] F. Muecksch, H. Wise, B. Batchelor, M. Squires, E. Semple, C. Richardson, J. McGuire, S. Clearly, E. Furrie, N. Greig, G. Hay, K. Templeton, J. C. C. Lorenzi, T. Hatziioannou, S. Jenks, P. D. Bieniasz, Longitudinal Serological Analysis and Neutralizing Antibody Levels in Coronavirus Disease 2019 Convalescent Patients. J. Infect. Dis. 223, 389– 398 (2021). 10.1093/infdis/jiaa659 33140086 PMC7665595 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationNumerous neutralizing anti-RBD monoclonal antibodies have been characterized, the most potent of which block the RBD-ACE2 interaction.
“Numerous neutralizing anti-RBD monoclonal antibodies (mAbs) have been characterized, the most potent of which block the RBD-ACE2 interaction (16, 17, 22–24, 32–37).”
Quote in the paperNot a substantial claim0 of 10 sources checked- cites [16] T. F. Rogers, F. Zhao, D. Huang, N. Beutler, A. Burns, W. T. He, O. Limbo, C. Smith, G. Song, J. Woehl, L. Yang, R. K. Abbott, S. Callaghan, E. Garcia, J. Hurtado, M. Parren, L. Peng, S. Ramirez, J. Ricketts, M. J. Ricciardi, S. A. Rawlings, N. C. Wu, M. Yuan, D. M. Smith, D. Nemazee, J. R. Teijaro, J. E. Voss, I. A. Wilson, R. Andrabi, B. Briney, E. Landais, D. Sok, J. G. Jardine, D. R. Burton, Isolation of potent SARS-CoV-2 neutralizing antibodies and protection from disease in a small animal model. Science 369, 956– 963 (2020). 10.1126/science.abc7520 32540903 PMC7299280 source
Not checked in the free run.
- cites [17] S. J. Zost, P. Gilchuk, J. B. Case, E. Binshtein, R. E. Chen, J. P. Nkolola, A. Schäfer, J. X. Reidy, A. Trivette, R. S. Nargi, R. E. Sutton, N. Suryadevara, D. R. Martinez, L. E. Williamson, E. C. Chen, T. Jones, S. Day, L. Myers, A. O. Hassan, N. M. Kafai, E. S. Winkler, J. M. Fox, S. Shrihari, B. K. Mueller, J. Meiler, A. Chandrashekar, N. B. Mercado, J. J. Steinhardt, K. Ren, Y.-M. Loo, N. L. Kallewaard, B. T. McCune, S. P. Keeler, M. J. Holtzman, D. H. Barouch, L. E. Gralinski, R. S. Baric, L. B. Thackray, M. S. Diamond, R. H. Carnahan, J. E. Crowe Jr.,., Potently neutralizing and protect source
Not checked in the free run.
- cites [22] E. Seydoux, L. J. Homad, A. J. MacCamy, K. R. Parks, N. K. Hurlburt, M. F. Jennewein, N. R. Akins, A. B. Stuart, Y.-H. Wan, J. Feng, R. E. Whaley, S. Singh, M. Boeckh, K. W. Cohen, M. J. McElrath, J. A. Englund, H. Y. Chu, M. Pancera, A. T. McGuire, L. Stamatatos, Analysis of a SARS-CoV-2-Infected Individual Reveals Development of Potent Neutralizing Antibodies with Limited Somatic Mutation. Immunity 53, 98– 105.e5 (2020). 10.1016/j.immuni.2020.06.001 32561270 PMC7276322 source
Not checked in the free run.
- cites [23] D. F. Robbiani, C. Gaebler, F. Muecksch, J. C. C. Lorenzi, Z. Wang, A. Cho, M. Agudelo, C. O. Barnes, A. Gazumyan, S. Finkin, T. Hägglöf, T. Y. Oliveira, C. Viant, A. Hurley, H.-H. Hoffmann, K. G. Millard, R. G. Kost, M. Cipolla, K. Gordon, F. Bianchini, S. T. Chen, V. Ramos, R. Patel, J. Dizon, I. Shimeliovich, P. Mendoza, H. Hartweger, L. Nogueira, M. Pack, J. Horowitz, F. Schmidt, Y. Weisblum, E. Michailidis, A. W. Ashbrook, E. Waltari, J. E. Pak, K. E. Huey-Tubman, N. Koranda, P. R. Hoffman, A. P. West Jr.., C. M. Rice, T. Hatziioannou, P. J. Bjorkman, P. D. Bieniasz, M. Caskey, M. C. Nuss source
Not checked in the free run.
- cites [24] P. J. M. Brouwer, T. G. Caniels, K. van der Straten, J. L. Snitselaar, Y. Aldon, S. Bangaru, J. L. Torres, N. M. A. Okba, M. Claireaux, G. Kerster, A. E. H. Bentlage, M. M. van Haaren, D. Guerra, J. A. Burger, E. E. Schermer, K. D. Verheul, N. van der Velde, A. van der Kooi, J. van Schooten, M. J. van Breemen, T. P. L. Bijl, K. Sliepen, A. Aartse, R. Derking, I. Bontjer, N. A. Kootstra, W. J. Wiersinga, G. Vidarsson, B. L. Haagmans, A. B. Ward, G. J. de Bree, R. W. Sanders, M. J. van Gils, Potent neutralizing antibodies from COVID-19 patients define multiple targets of vulnerability. Science 3 source
Not checked in the free run.
- cites [32] C. O. Barnes, A. P. West Jr., K. E. Huey-Tubman, M. A. G. Hoffmann, N. G. Sharaf, P. R. Hoffman, N. Koranda, H. B. Gristick, C. Gaebler, F. Muecksch, J. C. Cetrulo Lorenzi, S. Finkin, T. Hägglöf, A. Hurley, K. G. Millard, Y. Weisblum, F. Schmidt, T. Hatziioannou, P. D. Bieniasz, M. Caskey, D. F. Robbiani, M. C. Nussenzweig, P. J. Bjorkman, Structures of Human Antibodies Bound to SARS-CoV-2 Spike Reveal Common Epitopes and Recurrent Features of Antibodies. Cell 182, 828– 842.e16 (2020). 10.1016/j.cell.2020.06.025 32645326 PMC7311918 source
Not checked in the free run.
- cites [33] L. Liu, P. Wang, M. S. Nair, J. Yu, M. Rapp, Q. Wang, Y. Luo, J. F.-W. Chan, V. Sahi, A. Figueroa, X. V. Guo, G. Cerutti, J. Bimela, J. Gorman, T. Zhou, Z. Chen, K.-Y. Yuen, P. D. Kwong, J. G. Sodroski, M. T. Yin, Z. Sheng, Y. Huang, L. Shapiro, D. D. Ho, Potent neutralizing antibodies against multiple epitopes on SARS-CoV-2 spike. Nature 584, 450– 456 (2020). 10.1038/s41586-020-2571-7 32698192 source
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- cites [34] J. Hansen, A. Baum, K. E. Pascal, V. Russo, S. Giordano, E. Wloga, B. O. Fulton, Y. Yan, K. Koon, K. Patel, K. M. Chung, A. Hermann, E. Ullman, J. Cruz, A. Rafique, T. Huang, J. Fairhurst, C. Libertiny, M. Malbec, W. Y. Lee, R. Welsh, G. Farr, S. Pennington, D. Deshpande, J. Cheng, A. Watty, P. Bouffard, R. Babb, N. Levenkova, C. Chen, B. Zhang, A. Romero Hernandez, K. Saotome, Y. Zhou, M. Franklin, S. Sivapalasingam, D. C. Lye, S. Weston, J. Logue, R. Haupt, M. Frieman, G. Chen, W. Olson, A. J. Murphy, N. Stahl, G. D. Yancopoulos, C. A. Kyratsous, Studies in humanized mice and convalescent hu source
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- cites [35] B. Ju, Q. Zhang, J. Ge, R. Wang, J. Sun, X. Ge, J. Yu, S. Shan, B. Zhou, S. Song, X. Tang, J. Yu, J. Lan, J. Yuan, H. Wang, J. Zhao, S. Zhang, Y. Wang, X. Shi, L. Liu, J. Zhao, X. Wang, Z. Zhang, L. Zhang, Human neutralizing antibodies elicited by SARS-CoV-2 infection. Nature 584, 115– 119 (2020). 10.1038/s41586-020-2380-z 32454513 source
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- cites [36] Y. Cao, B. Su, X. Guo, W. Sun, Y. Deng, L. Bao, Q. Zhu, X. Zhang, Y. Zheng, C. Geng, X. Chai, R. He, X. Li, Q. Lv, H. Zhu, W. Deng, Y. Xu, Y. Wang, L. Qiao, Y. Tan, L. Song, G. Wang, X. Du, N. Gao, J. Liu, J. Xiao, X. D. Su, Z. Du, Y. Feng, C. Qin, C. Qin, R. Jin, X. S. Xie, Potent Neutralizing Antibodies against SARS-CoV-2 Identified by High-Throughput Single-Cell Sequencing of Convalescent Patients’ B Cells. Cell 182, 73– 84.e16 (2020). 10.1016/j.cell.2020.05.025 32425270 PMC7231725 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationMost serum nAb responses elicited during natural infection are directed at the RBD.
“Most serum nAb responses elicited during natural infection are directed at the RBD (21, 23, 30, 31).”
Quote in the paperNot a substantial claim0 of 4 sources checked- cites [21] M. S. Suthar, M. G. Zimmerman, R. C. Kauffman, G. Mantus, S. L. Linderman, W. H. Hudson, A. Vanderheiden, L. Nyhoff, C. W. Davis, O. Adekunle, M. Affer, M. Sherman, S. Reynolds, H. P. Verkerke, D. N. Alter, J. Guarner, J. Bryksin, M. C. Horwath, C. M. Arthur, N. Saakadze, G. H. Smith, S. Edupuganti, E. M. Scherer, K. Hellmeister, A. Cheng, J. A. Morales, A. S. Neish, S. R. Stowell, F. Frank, E. Ortlund, E. J. Anderson, V. D. Menachery, N. Rouphael, A. K. Mehta, D. S. Stephens, R. Ahmed, J. D. Roback, J. Wrammert, Rapid Generation of Neutralizing Antibody Responses in COVID-19 Patients. Cell Re source
Not checked in the free run.
- cites [23] D. F. Robbiani, C. Gaebler, F. Muecksch, J. C. C. Lorenzi, Z. Wang, A. Cho, M. Agudelo, C. O. Barnes, A. Gazumyan, S. Finkin, T. Hägglöf, T. Y. Oliveira, C. Viant, A. Hurley, H.-H. Hoffmann, K. G. Millard, R. G. Kost, M. Cipolla, K. Gordon, F. Bianchini, S. T. Chen, V. Ramos, R. Patel, J. Dizon, I. Shimeliovich, P. Mendoza, H. Hartweger, L. Nogueira, M. Pack, J. Horowitz, F. Schmidt, Y. Weisblum, E. Michailidis, A. W. Ashbrook, E. Waltari, J. E. Pak, K. E. Huey-Tubman, N. Koranda, P. R. Hoffman, A. P. West Jr.., C. M. Rice, T. Hatziioannou, P. J. Bjorkman, P. D. Bieniasz, M. Caskey, M. C. Nuss source
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- cites [30] L. Piccoli, Y.-J. Park, M. A. Tortorici, N. Czudnochowski, A. C. Walls, M. Beltramello, C. Silacci-Fregni, D. Pinto, L. E. Rosen, J. E. Bowen, O. J. Acton, S. Jaconi, B. Guarino, A. Minola, F. Zatta, N. Sprugasci, J. Bassi, A. Peter, A. De Marco, J. C. Nix, F. Mele, S. Jovic, B. F. Rodriguez, S. V. Gupta, F. Jin, G. Piumatti, G. Lo Presti, A. F. Pellanda, M. Biggiogero, M. Tarkowski, M. S. Pizzuto, E. Cameroni, C. Havenar-Daughton, M. Smithey, D. Hong, V. Lepori, E. Albanese, A. Ceschi, E. Bernasconi, L. Elzi, P. Ferrari, C. Garzoni, A. Riva, G. Snell, F. Sallusto, K. Fink, H. W. Virgin, A. La source
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- cites [31] T. L. Steffen, E. T. Stone, M. Hassert, E. Geerling, B. T. Grimberg, A. M. Espino, P. Pantoja, C. Climent, D. F. Hoft, S. L. George, C. A. Sariol, A. K. Pinto, J. D. Brien, The receptor binding domain of SARS-CoV-2 spike is the key target of neutralizing antibody in human polyclonal sera. bioRxiv 2020.08.21.261727 [Preprint]. 22 August 2020. 10.1101/2020.08.21.261727. 10.1101/2020.08.21.261727 source
Not checked in the free run.
Classified as probably not a substantial claim. May combine two claims.
PremisecitationRecently, viral variants of concern have emerged in the UK (B.1.1.7), South Africa (B.1.351), and Brazil (P.1) that harbor specific mutations in their S proteins that may be associated with increased transmissibility.
“Recently, viral variants of concern have emerged in the UK (B.1.1.7), South Africa (B.1.351), and Brazil (P.1) that harbor specific mutations in their S proteins that may be associated with increased transmissibility (50–55).”
Quote in the paperSubstantial claim0 of 6 sources checked- cites [50] A. Rambaut, N. Loman, O. Pybus, W. Barclay, J. Barrett, A. Carabelli, T. Connor, T. Peacock, D. L. Robertson, E. Volz, COVID-19 Genomics Consortium UK (CoG-UK), “Preliminary genomic characterisation of an emergent SARS-CoV-2 lineage in the UK defined by a novel set of spike mutations” (Virological, 2021); https://virological.org/t/preliminary-genomic-characterisation-of-an-emergent-sars-cov-2-lineage-in-the-uk-defined-by-a-novel-set-of-spike-mutations/563.
Not checked in the free run.
- cites [51] E. Volz, S. Mishra, M. Chand, J. C. Barrett, R. Johnson, L. Geidelberg, W. R. Hinsley, D. J. Laydon, G. Dabrera, Á. O’Toole, R. Amato, M. Ragonnet-Cronin, I. Harrison, B. Jackson, C. V. Ariani, O. Boyd, N. J. Loman, J. T. McCrone, S. Gonçalves, D. Jorgensen, R. Myers, V. Hill, D. K. Jackson, K. Gaythorpe, N. Groves, J. Sillitoe, D. P. Kwiatkowski, The COVID-19 Genomics UK (COG-UK) consortium, S. Flaxman, O. Ratmann, S. Bhatt, S. Hopkins, A. Gandy, A. Rambaut, N. M. Ferguson, Transmission of SARS-CoV-2 Lineage B.1.1.7 in England: Insights from linking epidemiological and genetic data. medRxiv 2 source
Not checked in the free run.
- cites [52] H. Tegally, E. Wilkinson, M. Giovanetti, A. Iranzadeh, V. Fonseca, J. Giandhari, D. Doolabh, S. Pillay, E. J. San, N. Msomi, K. Mlisana, A. von Gottberg, S. Walaza, M. Allam, A. Ismail, T. Mohale, A. J. Glass, S. Engelbrecht, G. Van Zyl, W. Preiser, F. Petruccione, A. Sigal, D. Hardie, G. Marais, M. Hsiao, S. Korsman, M.-A. Davies, L. Tyers, I. Mudau, D. York, C. Maslo, D. Goedhals, S. Abrahams, O. Laguda-Akingba, A. Alisoltani-Dehkordi, A. Godzik, C. K. Wibmer, B. T. Sewell, J. Lourenço, L. C. J. Alcantara, S. L. Kosakovsky Pond, S. Weaver, D. Martin, R. J. Lessells, J. N. Bhiman, C. Williams source
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- cites [53] N. G. Davies, S. Abbott, R. C. Barnard, C. I. Jarvis, A. J. Kucharski, J. D. Munday, C. A. B. Pearson, T. W. Russell, D. C. Tully, A. D. Washburne, T. Wenseleers, A. Gimma, W. Waites, K. L. M. Wong, K. van Zandvoort, J. D. Silverman, CMMID COVID-19 Working Group, The COVID-19 Genomics UK (COG-UK) Consortium, K. Diaz-Ordaz, R. Keogh, R. M. Eggo, S. Funk, M. Jit, K. E. Atkins, W. J. Edmunds, Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England. Science 372, eabg3055 (2021). 10.1126/science.abg3055 33658326 PMC8128288 source
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- cites [54] E. C. Sabino, L. F. Buss, M. P. S. Carvalho, C. A. Prete Jr.., M. A. E. Crispim, N. A. Fraiji, R. H. M. Pereira, K. V. Parag, P. da Silva Peixoto, M. U. G. Kraemer, M. K. Oikawa, T. Salomon, Z. M. Cucunuba, M. C. Castro, A. A. de Souza Santos, V. H. Nascimento, H. S. Pereira, N. M. Ferguson, O. G. Pybus, A. Kucharski, M. P. Busch, C. Dye, N. R. Faria, Resurgence of COVID-19 in Manaus, Brazil, despite high seroprevalence. Lancet 397, 452– 455 (2021). 10.1016/S0140-6736(21)00183-5 33515491 PMC7906746 source
Not checked in the free run.
- cites [55] N. R. Faria, I. Morales Claro, D. Candido, L. A. Moyses Franco, P. S. Andrade, T. M. Coletti, C. A. M. Silva, F. C. Sales, E. R. Manuli, R. S. Aguiar, N. Gaburo, C. d. C. Camilo, N. A. Fraiji, M. A. Esashika Crispim, M. d. P. S. S. Carvalho, A. Rambaut, N. Loman, O. G. Pybus, E. C. Sabino, CADDE Genomic Network, “Genomic characterisation of an emergent SARS-CoV-2 lineage in Manaus: preliminary findings” (Virological, 2021); https://virological.org/t/genomic-characterisation-of-an-emergent-sars-cov-2-lineage-in-manaus-preliminary-findings/586.
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationTwo mRNA-based vaccines (Pfizer-BioNTech BNT162b2 and Moderna mRNA-1273) encode a stabilized ectodomain version of the S protein derived from the Wuhan-Hu-1 variant isolated in December 2019.
“Both vaccines encode a stabilized ectodomain version of the S protein derived from the Wuhan-Hu-1 variant isolated in December 2019 (43)”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [43] F. Wu, S. Zhao, B. Yu, Y.-M. Chen, W. Wang, Z.-G. Song, Y. Hu, Z.-W. Tao, J.-H. Tian, Y.-Y. Pei, M.-L. Yuan, Y.-L. Zhang, F.-H. Dai, Y. Liu, Q.-M. Wang, J.-J. Zheng, L. Xu, E. C. Holmes, Y.-Z. Zhang, A new coronavirus associated with human respiratory disease in China. Nature 579, 265– 269 (2020). 10.1038/s41586-020-2008-3 32015508 PMC7094943 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationReduced sensitivity to vaccine-elicited nAbs has been reported for other B.1.351 variants.
“Reduced sensitivity to vaccine-elicited nAbs has been reported for other B.1.351 variants (66, 83, 84).”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [66] P. Wang, M. S. Nair, L. Liu, S. Iketani, Y. Luo, Y. Guo, M. Wang, J. Yu, B. Zhang, P. D. Kwong, B. S. Graham, J. R. Mascola, J. Y. Chang, M. T. Yin, M. Sobieszczyk, C. A. Kyratsous, L. Shapiro, Z. Sheng, Y. Huang, D. D. Ho, Antibody Resistance of SARS-CoV-2 Variants B.1.351 and B.1.1.7. bioRxiv 2021.01.25.428137 [Preprint]. 12 February 2021. 10.1101/2021.01.25.428137. 10.1101/2021.01.25.428137 33684923 source
Not checked in the free run.
- cites [83] Y. Liu, J. Liu, H. Xia, X. Zhang, C. R. Fontes-Garfias, K. A. Swanson, H. Cai, R. Sarkar, W. Chen, M. Cutler, D. Cooper, S. C. Weaver, A. Muik, U. Sahin, K. U. Jansen, X. Xie, P. R. Dormitzer, P.-Y. Shi, Neutralizing Activity of BNT162b2-Elicited Serum. N. Engl. J. Med. 384, 1466– 1468 (2021). 10.1056/NEJMc2102017 33684280 PMC7944950 source
Not checked in the free run.
- cites [84] K. Wu, A. P. Werner, M. Koch, A. Choi, E. Narayanan, G. B. E. Stewart-Jones, T. Colpitts, H. Bennett, S. Boyoglu-Barnum, W. Shi, J. I. Moliva, N. J. Sullivan, B. S. Graham, A. Carfi, K. S. Corbett, R. A. Seder, D. K. Edwards, Serum Neutralizing Activity Elicited by mRNA-1273 Vaccine. N. Engl. J. Med. 384, 1468– 1470 (2021). 10.1056/NEJMc2102179 33730471 PMC8008744 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationThe B.1.351 lineage is defined by the D80A and D215G mutations in the NTD; the K417N, E484K, and N501Y mutations in the RBD; and the D614G mutation in S1.
“the B.1.351 lineage, which is defined by the D80A (amino acid substitution from aspartic acid to alanine at position 80) and D215G mutations in the NTD; the K417N, E484K, and N501Y mutations in the RBD; and the D614G mutation in S1 (52, 56).”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [52] H. Tegally, E. Wilkinson, M. Giovanetti, A. Iranzadeh, V. Fonseca, J. Giandhari, D. Doolabh, S. Pillay, E. J. San, N. Msomi, K. Mlisana, A. von Gottberg, S. Walaza, M. Allam, A. Ismail, T. Mohale, A. J. Glass, S. Engelbrecht, G. Van Zyl, W. Preiser, F. Petruccione, A. Sigal, D. Hardie, G. Marais, M. Hsiao, S. Korsman, M.-A. Davies, L. Tyers, I. Mudau, D. York, C. Maslo, D. Goedhals, S. Abrahams, O. Laguda-Akingba, A. Alisoltani-Dehkordi, A. Godzik, C. K. Wibmer, B. T. Sewell, J. Lourenço, L. C. J. Alcantara, S. L. Kosakovsky Pond, S. Weaver, D. Martin, R. J. Lessells, J. N. Bhiman, C. Williams source
Not checked in the free run.
- cites [56] Á. O’Toole, V. Hill, O. G. Pybus, A. Watts, I. I. Bogoch, K. Khan, J. P. Messina, The COVID-19 Genomics UK (COG-UK) consortium, Network for Genomic Surveillance in South Africa (NGS-SA), Brazil-UK CADDE Genomic Network, H. Tegally, R. R. Lessells, J. Giandhari, S. Pillay, K. A. Tumedi, G. Nyepetsi, M. Kebabonye, M. Matsheka, M. Mine, S. Tokajian, H. Hassan, T. Salloum, G. Merhi, J. Koweyes, J. L. Geoghegan, J. de Ligt, X. Ren, M. Storey, N. E. Freed, C. Pattabiraman, P. Prasad, A. S. Desai, R. Vasanthapuram, T. F. Schulz, L. Steinbrück, T. Stadler, Swiss Viollier Sequencing Consortium, A. Pari source
Not checked in the free run.
May combine two claims.
Interpretationown dataThe two mRNA vaccines that are based on the Wuhan-Hu-1 variant can elicit and/or boost nAb responses but their potency is reduced against divergent variants.
“Collectively, our data suggest that the two mRNA vaccines that are based on the Wuhan-Hu-1 variant can elicit and/or boost nAb responses but that their potency is reduced against divergent variants.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationAn A701V mutation in S2 is also observed at high frequencies in B.1.351, whereas deletions in residues 242 to 244 as well as R246I and L18F mutations in the NTD are present at lower frequencies.
“An A701V mutation in S2 is also observed at high frequencies, whereas deletions in residues 242 to 244 as well as R246I and L18F mutations in the NTD are present at lower frequencies (52).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [52] H. Tegally, E. Wilkinson, M. Giovanetti, A. Iranzadeh, V. Fonseca, J. Giandhari, D. Doolabh, S. Pillay, E. J. San, N. Msomi, K. Mlisana, A. von Gottberg, S. Walaza, M. Allam, A. Ismail, T. Mohale, A. J. Glass, S. Engelbrecht, G. Van Zyl, W. Preiser, F. Petruccione, A. Sigal, D. Hardie, G. Marais, M. Hsiao, S. Korsman, M.-A. Davies, L. Tyers, I. Mudau, D. York, C. Maslo, D. Goedhals, S. Abrahams, O. Laguda-Akingba, A. Alisoltani-Dehkordi, A. Godzik, C. K. Wibmer, B. T. Sewell, J. Lourenço, L. C. J. Alcantara, S. L. Kosakovsky Pond, S. Weaver, D. Martin, R. J. Lessells, J. N. Bhiman, C. Williams source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationThe B.1.1.7, B.1.351, and P.1 lineages all harbor a N501Y mutation in the RBD, which increases the affinity for the ACE2 receptor, and a D614G mutation, which increases virion spike density, infectivity, and transmissibility.
“The B.1.1.7, B.1.351, and P.1 lineages all harbor a N501Y mutation in the RBD, which increases the affinity for the ACE2 receptor (57, 58), and a D614G mutation, which increases virion spike density, infectivity, and transmissibility (59, 60).”
Quote in the paperNot a substantial claim0 of 4 sources checked- cites [57] K. K. Chan, T. J. C. Tan, K. K. Narayanan, E. Procko, An engineered decoy receptor for SARS-CoV-2 broadly binds protein S sequence variants. Sci. Adv. 7, eabf1738 (2021). 10.1126/sciadv.abf1738 33597251 PMC7888922 source
Not checked in the free run.
- cites [58] T. N. Starr, A. J. Greaney, A. Addetia, W. W. Hannon, M. C. Choudhary, A. S. Dingens, J. Z. Li, J. D. Bloom, Prospective mapping of viral mutations that escape antibodies used to treat COVID-19. Science 371, 850– 854 (2021). 10.1126/science.abf9302 33495308 PMC7963219 source
Not checked in the free run.
- cites [59] L. Zhang, C. B. Jackson, H. Mou, A. Ojha, H. Peng, B. D. Quinlan, E. S. Rangarajan, A. Pan, A. Vanderheiden, M. S. Suthar, W. Li, T. Izard, C. Rader, M. Farzan, H. Choe, SARS-CoV-2 spike-protein D614G mutation increases virion spike density and infectivity. Nat. Commun. 11, 6013 (2020). 10.1038/s41467-020-19808-4 33243994 PMC7693302 source
Not checked in the free run.
- cites [60] B. Zhou, T. Thi Nhu Thao, D. Hoffmann, A. Taddeo, N. Ebert, F. Labroussaa, A. Pohlmann, J. King, S. Steiner, J. N. Kelly, J. Portmann, N. J. Halwe, L. Ulrich, B. S. Trüeb, X. Fan, B. Hoffmann, L. Wang, L. Thomann, X. Lin, H. Stalder, B. Pozzi, S. de Brot, N. Jiang, D. Cui, J. Hossain, M. Wilson, M. Keller, T. J. Stark, J. R. Barnes, R. Dijkman, J. Jores, C. Benarafa, D. E. Wentworth, V. Thiel, M. Beer, SARS-CoV-2 spike D614G change enhances replication and transmission. Nature 592, 122– 127 (2021). 10.1038/s41586-021-03361-1 33636719 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenExperiments were performed once.
“Experiments were performed once.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenData are representative of two independent experiments.
“Data are representative of two independent experiments.”
Quote in the paperNot a substantial claimMay combine two claims.
Interpretationown dataMost previously infected subjects will benefit from a single immunization with either the Pfizer-BioNTech or Moderna vaccines, as it will lead to significant increases in serum nAb responses against vaccine-matched and emerging variants.
“Our study suggests that most previously infected subjects will benefit from a single immunization with either the Pfizer-BioNTech or Moderna vaccines, as it will lead to significant increases in serum nAb responses against vaccine-matched and emerging variants.”
Quote in the paperSubstantial claimClassified as probably not a substantial claim.
Study design and conductown dataThe viral stocks were appropriately diluted to achieve comparable entry levels during the neutralization experiments.
“The viral stocks were appropriately diluted to achieve comparable entry levels during the neutralization experiments (fig. S1).”
Quote in the paperSubstantial claim
The paper relies on this without support.
Correlates of protection in humans against repeat infection or after vaccination have not been firmly established.
“Although the correlates of protection in humans against repeat infection or after vaccination have not been firmly established”
The paper relies on this without support.
Correlates of protection for SARS-CoV-2 vaccines have not been established.
“Although the correlates of protection for SARS-CoV-2 vaccines have not been established”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
mRNA vaccines induced robust circulating antibody responses to SARS-CoV-2 spike protein and spike RBD, with distinct early response patterns in naïve and recovered individuals.
“As reported previously by our group and others, mRNA vaccines induced robust circulating antibody responses to the SARS-CoV-2 spike protein and spike RBD with distinct patterns of early response in SARS-CoV-2–naïve and –recovered individuals (Fig. 1B) (16, 34–36).”
From mRNA vaccines induce durable immune memory to SARS-CoV-2 and variants of concern (2021) · cites this paper as [34]
Vaccination of convalescent individuals led to 2-10-fold higher neutralisation titres than naive individuals after primary vaccination.
“Aggregating these studies, we found that vaccination of convalescent individuals led to 2–10-fold higher neutralisation titres than that seen in naive individuals after primary vaccination (figure 3 ; appendix p 19)26, 27, 28, 29, 30, 31”
From Neutralising antibody titres as predictors of protection against SARS-CoV-2 variants and the impact of boosting: a meta-analysis (2022) · cites this paper as [28]
Vaccination with a single dose of mRNA vaccine is sufficient to boost neutralising antibody responses in previously infected individuals, and a second dose has minimal additional effect.
“These studies have found that vaccination with a single dose of mRNA vaccine is sufficient to boost responses in previously infected individuals (and indeed a second dose has minimal effect).28, 29”
From Neutralising antibody titres as predictors of protection against SARS-CoV-2 variants and the impact of boosting: a meta-analysis (2022) · cites this paper as [28]
Vaccination of convalescent individuals improved cross-reactivity to variants.
“and improved cross-reactivity to variants.27, 28, 29, 30”
From Neutralising antibody titres as predictors of protection against SARS-CoV-2 variants and the impact of boosting: a meta-analysis (2022) · cites this paper as [28]
A preliminary analysis of reinfection trends in England suggested that the Delta variant may have a higher risk of reinfection compared to the Alpha variant, but this analysis did not take into account the temporal trend in the population at risk for reinfection, which may have biased the findings.
“A preliminary analysis of reinfection trends in England suggested that the Delta variant may have a higher risk of reinfection compared to the Alpha variant ( 20 ); however, this analysis did not take into account the temporal trend in the population at risk for reinfection, which may have biased the findings.”
From Increased risk of SARS-CoV-2 reinfection associated with emergence of Omicron in South Africa (2021) · cites this paper as [20]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
Each contradiction between two passages listed here was confirmed by an independent check.
Figure 4 panel references do not match the assays described
MinorThe text cites panel C as evidence of RBD-antibody removal and panel D as evidence that anti-S2P antibodies were retained. The figure caption instead identifies C as a neutralization assay and D as an RBD-binding assay; the S2P-binding assay for those donors is panel E.
“This approach efficiently removed RBD-specific (Fig. 4, A and C) but not anti-S2P–specific antibodies from sera, as measured by enzyme-linked immunosorbent assay (ELISA) (Fig. 4, B and D).”
“(C) The serum dilution resulting in 50% neutralization (ID50) of the Wuhan-Hu-1 pseudovirus was measured in undepleted or RBD-depleted sera from the PIDs in (A) and (B). (D and E) Antibody binding in undepleted and RBD-depleted sera from NDs was measured to RBD at a 1:500 dilution (D) and S2P at a 1:500 dilution (E) by ELISA.”
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References 94 · Cited by 557
- Authors
- Stamatatos, L., Czartoski, J., Wan, Y.-H., Homad, L. J., Rubin, V., Glantz, H., Neradilek, M., Seydoux, E., Jennewein, M. F., MacCamy, A. J., Feng, J., Mize, G., De Rosa, S. C., Finzi, A., Lemos, M. P., Cohen, K. W., Moodie, Z., McElrath, M. J., & McGuire, A. T.
- Affiliations
- University of Washington (US)
- Fred Hutch Cancer Center (US)
- Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
- Centre Hospitalier de l’Université de Montréal (CA)
- Corresponding author
- Stamatatos, Leonidas
- McElrath, M. Juliana
- McGuire, Andrew T.
- ORCID
- Venue
- Science
- Published
- 2021-06-25
- Volume
- 372
- Issue
- 6549
- Pages
- 1413-1418
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- PMC
- PMC8139425
- OpenAlex
- W3136570200
- Cited by
- 557
- References
- 94
- Citations by year
- 2026: 14 · 2025: 35 · 2024: 49 · 2023: 72 · 2022: 211 · 2021: 175
- FWCI
- 40.11
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Science (publishedVersion, cc-by)
- medRxiv (acceptedVersion, cc-by-nc-nd)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- PubMed Central (submittedVersion, cc-by-nc-nd)
- Funders
- National Institute of Allergy and Infectious Diseases (UM1 AI068618-14S1, 2UM1AI069481-15, UM1A057266-S1)
- Paul G. Allen Family Foundation
- Fred Hutchinson Cancer Research Center
- Joel D. Meyers Endowed Chair
- Topics
- Health Sciences › Medicine › Infectious Diseases › SARS-CoV-2 and COVID-19 Research
- Life Sciences › Immunology and Microbiology › Immunology › Immune responses and vaccinations
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › vaccines and immunoinformatics approaches
- Keywords
- mRNA vaccines, SARS-CoV-2, booster vaccination, B.1.351 variant, reinfection protection, memory B cells, antibody neutralization
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Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
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