The DOI matches its Crossref record; 88 of the 89 references it cites were found in a registry or an index; 8 of the 88 sources its claims cite were checked for support.
ApoE3 vs. ApoE4 Astrocytes: A Detailed Analysis Provides New Insights into Differences in Cholesterol Homeostasis
Open accessAbstract
The strongest genetic risk factor for sporadic Alzheimer’s disease (AD) is the presence of the ε4 allele of the apolipoprotein E (ApoE) gene, the major apolipoprotein involved in brain cholesterol homeostasis. Being astrocytes the main producers of cholesterol and ApoE in the brain, we investigated the impact of the ApoE genotype on astrocyte cholesterol homeostasis. Two mouse astrocytic cell lines expressing the human ApoE3 or ApoE4 isoform were employed. Gas chromatography–mass spectrometry (GC-MS) analysis pointed out that the levels of total cholesterol, cholesterol precursors, and various oxysterols are altered in ApoE4 astrocytes. Moreover, the gene expression analysis of more than 40 lipid-related genes by qRT-PCR showed that certain genes are up-regulated (e.g., CYP27A1) and others down-regulated (e.g., PPARγ, LXRα) in ApoE4, compared to ApoE3 astrocytes. Beyond confirming the significant reduction in the levels of PPARγ, a key transcription factor involved in the maintenance of lipid homeostasis, Western blotting showed that both intracellular and secreted ApoE levels are altered in ApoE4 astrocytes, as well as the levels of receptors and transporters involved in lipid uptake/efflux (ABCA1, LDLR, LRP1, and ApoER2). Data showed that the ApoE genotype clearly affects astrocytic cholesterol homeostasis; however, further investigation is needed to clarify the mechanisms underlying these differences and the consequences on neighboring cells. Indeed, drug development aimed at restoring cholesterol homeostasis could be a potential strategy to counteract AD.
Overview
AI snapshot
Written from the paper’s full text.
TL;DR
This study compared immortalized mouse astrocytic cell lines expressing human ApoE3 or ApoE4 and found that ApoE4 astrocytes have altered cholesterol homeostasis, including changes in cholesterol precursors, oxysterols, lipid-related gene expression, and key cholesterol transport proteins. The authors suggest these differences may help explain ApoE4-related Alzheimer’s disease risk and identify cholesterol-homeostasis restoration as a potential therapeutic strategy.
Key findings
- ApoE4 astrocytes had less than half the intracellular ApoE of ApoE3 astrocytes (p < 0.0001), while secreted ApoE in astrocyte-conditioned media was more than doubled (p < 0.01).
- GC-MS showed lower total cholesterol (−14%; p < 0.05), higher lanosterol (+54%; p < 0.0001) and lathosterol (+142%; p < 0.0001), and lower desmosterol (−32%; p < 0.01) in ApoE4 astrocytes; oxysterols showed higher 25-OHC (+282%; p < 0.0001) and 27-OHC (+72%; p < 0.001), but lower 24-OHC (−36%; p < 0.0001), 7α-OHC (−51%; p < 0.0001), and 7β-OHC (−52%; p < 0.0001), with no significant change in 7-KC.
- Among 43 lipid-related genes, ApoE4 astrocytes showed up-regulation of CYP27A1 (p < 0.0001), ALOX15 (p < 0.0001), HMGCS1 (p < 0.0001), and others, and down-regulation of PPARγ (p < 0.0001), LXRα/NR1H3 (p < 0.0001), ABCA1 (p < 0.05), and others.
- Protein analysis confirmed lower PPARγ, ABCA1, LDLR, LRP1 (all p < 0.0001), and ApoER2 (p < 0.001) in ApoE4 astrocytes; the authors propose a possible shift from the Bloch to the Kandutsch–Russell cholesterol synthesis pathway.
Methods
- Immortalized mouse astrocytes derived from ApoE-targeted replacement (ApoE-TR) mouse primary astrocytes expressing human ApoE3 or ApoE4 under the control of the endogenous mouse ApoE promoter.
- Sterols and oxysterols were quantified by isotope dilution GC-MS; gene expression was analyzed by qRT-PCR using a 43-gene lipid-regulated array plus single TaqMan assays; protein levels were assessed by Western blotting and immunocytochemistry.
- Statistical analysis used Student’s t-test with Welch correction, with significance set at p < 0.05; data are presented as means ± SD.
Limitations
- The paper states that it is aware of limitations of the employed experimental model and that further investigation is needed to clarify mechanisms and consequences on neighboring cells; it also notes that more in-depth analysis is needed to understand whether ApoE3 and ApoE4 astrocytes synthesize cholesterol through different pathways, and that PPARγ response networks are complex and require further study.
- Evident from the text: the study uses immortalized mouse astrocytic cell lines rather than human primary astrocytes or in vivo brain tissue, and some genes (LPL, ALOX5, ABCG1, IL1β) were undetectable, preventing calculation of exact down-regulation or significance for those genes.
- The text does not report functional outcomes such as neuronal effects, Aβ clearance, or cognitive measures, so the downstream consequences of the observed metabolic differences remain to be established.
Model-written summary. Check it against the paper before relying on it.
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Cites
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Verification
Claims the paper makes
8 of 88 cited sources checked · 1 supported · 2 flagged · accuracy not yet measured
- Findingown data
ApoE4 astrocytes contain significantly lower levels of all three receptors (LDLR, LRP1, ApoER2).
“Data showed that ApoE4 astrocytes contain significantly lower levels of all three receptors (Figure 5), although conflicting data regarding some of them have been obtained in primary and hiPSC-derived ApoE4 astrocytes [15,24,73].”
Quote in the paperSubstantial claim3 of 3 sources checked- cites [15] Tcw, 2022, Cholesterol and matrisome pathways dysregulated in astrocytes and microglia, Cell source
The Results section on impaired cholesterol trafficking reports significantly more LDL binding to cell-surface receptors, including LDLRs, in APOE4 astrocytes—the opposite direction from the claimed decrease for LDLR. Our copy does not report lower levels of LRP1 or ApoER2 in those cells; the reported decreases concern APOE protein and the ABCA1/ABCA7 transporters. Page numbers were not available in the indexed passages. (LLM, conf=0.76)
Checked by a reasoning model — may be wrong.
Experimental — accuracy not yet measured - cites [24] Kirschner, 2022, APOE2, E3, and E4 differentially modulate cellular homeostasis, cholesterol metabolism, and inflammatory response in isogenic iPSC-derived astrocytes, Stem Cell Rep. source
The Results section (page unavailable) reports no significant difference in LRP1 levels across genotypes, contrary to the claim that APOE4 astrocytes have significantly lower levels of all three receptors. The paper measured VLDLR alongside LRP1, not LDLR and ApoER2. It does support the citing sentence’s caveat that some receptor findings conflict. (LLM, conf=0.90)
Checked by a reasoning model — may be wrong.
Experimental — accuracy not yet measured - cites [73] Prasad, 2018, Amyloid clearance defect in ApoE4 astrocytes is reversed by epigenetic correction of endosomal pH, Proc. Natl. Acad. Sci. USA source
The section “Surface expression of LRP1 receptor is severely reduced in ApoE4 astrocytes” reports about 50% lower surface LRP1 in ApoE4 than ApoE3 astrocytes, but no difference in total LRP1 protein. Our copy does not establish significantly lower LDLR or ApoER2 levels, so it does not support the claim about all three receptors. (LLM, conf=0.89)
Experimental — accuracy not yet measured
- Interpretationcitation
The pronounced reduction in these receptors in ApoE4 astrocytes could be one of the reasons for the increased ApoE levels detected in ACM.
“the pronounced reduction in these receptors in ApoE4 astrocytes could be one of the reasons for the increased ApoE levels detected in ACM (Figure 1), as suggested by other studies [49,50].”
Quote in the paperSubstantial claim1 of 2 sources checked- cites [49] Fryer, 2005, The low density lipoprotein receptor regulates the level of central nervous system human and murine apolipoprotein E but does not modify amyloid plaque pathology in PDAPP mice, J. Biol. Chem. source
- cites [50] Basak, 2012, Low-density lipoprotein receptor represents an apolipoprotein E-independent pathway of Abeta uptake and degradation by astrocytes, J. Biol. Chem. source
- Premisecitation
LXRα is a key regulator of ABCA1 expression.
“a key regulator of ABCA1 expression [51]”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [51] Courtney, 2016, LXR Regulation of Brain Cholesterol: From Development to Disease, Trends Endocrinol. Metab. source
The “Cholesterol homeostasis in the CNS” section identifies LXR as a direct transcriptional regulator of ABCA1. The paper distinguishes LXRα from LXRβ in its section on LXR isoforms, but does not specifically identify LXRα as the key regulator of ABCA1 expression. (LLM, conf=0.83)
Experimental — accuracy not yet measured
- Findingown data
The levels of ApoE released in astrocyte-conditioned media by the ApoE4 cell line are more than doubled compared to those secreted by the ApoE3 cell line.
“On the other hand, the levels of ApoE released in ACM by the ApoE4 cell line resulted to be more than doubled compared to that secreted by the ApoE3 cell line (p < 0.01; Figure 1B).”
Quote in the paperSubstantial claim - Findingown data
25-OHC levels are higher in ApoE4 astrocytes than in ApoE3 astrocytes (+282%; p < 0.0001).
“Concerning the oxysterols of enzymatic origin, ApoE4 astrocytes have been shown to produce higher levels of 25-OHC (+282%; p < 0.0001) and 27-OHC (+72%; p < 0.001)”
Quote in the paperSubstantial claim
- Findingown data
PPARγ expression is significantly lower in ApoE4 astrocytes than in ApoE3 astrocytes.
“On the other hand, the most down-regulated genes in ApoE4 astrocytes are peroxisome proliferator activated receptor γ (PPARγ; p < 0.0001)”
- Also stated in: § 4. Discussion · plain
“Interestingly, LXRα and PPARγ, key proteins involved in the regulation of lipid homeostasis [51,52], have been shown to be two of the most down-regulated genes (Figure 2).”
Quote in the paperSubstantial claim - Also stated in: § 4. Discussion · plain
- Findingown data
ApoER2 protein levels are substantially lower in ApoE4 astrocytes than in ApoE3 astrocytes (p < 0.001).
“and the receptors low-density lipoprotein receptor (LDLR; p < 0.0001), LDLR-related protein 1 (LRP1; p < 0.0001), and ApoE receptor 2 (ApoER2; p < 0.001) (Figure 5)”
Quote in the paperSubstantial claim - Findingown data
CYP46A1 gene expression is reduced in ApoE4 astrocytes compared to ApoE3 astrocytes (p < 0.05).
“whereas those of CYP46A1 (p < 0.05) resulted to be reduced compared to ApoE3 astrocytes”
Quote in the paperSubstantial claim - Findingown data
Lathosterol levels are higher in ApoE4 astrocytes than in ApoE3 astrocytes (+142%; p < 0.0001).
“The analysis pointed out that the levels of the cholesterol precursors lanosterol (+54%; p < 0.0001) and lathosterol (+142%; p < 0.0001) are higher in ApoE4 astrocytes”
Quote in the paperSubstantial claim - Findingown data
CH25H gene expression is markedly increased in ApoE4 astrocytes (p < 0.0001).
“indeed, CH25H (p < 0.0001) and CYP27A1 (p < 0.0001) gene expression levels markedly increased in ApoE4 astrocytes”
Quote in the paperSubstantial claim - Findingown data
7β-OHC levels are lower in ApoE4 astrocytes than in ApoE3 astrocytes (−52%; p < 0.0001).
“Among the oxysterols of non-enzymatic origin, 7β-OHC levels were found to be lower (−52%; p < 0.0001)”
Quote in the paperSubstantial claim - Findingown data
ABCA1 expression is significantly lower in ApoE4 astrocytes than in ApoE3 astrocytes.
“ABC subfamily A member 1 (ABCA1; p < 0.05)”
Quote in the paperSubstantial claim - Findingown data
Lanosterol levels are higher in ApoE4 astrocytes than in ApoE3 astrocytes (+54%; p < 0.0001).
“The analysis pointed out that the levels of the cholesterol precursors lanosterol (+54%; p < 0.0001) and lathosterol (+142%; p < 0.0001) are higher in ApoE4 astrocytes”
Quote in the paperSubstantial claim - Findingown data
PPARγ protein levels are markedly decreased in ApoE4 compared to ApoE3 astrocytes (p < 0.0001).
“In addition, data confirmed that PPARγ protein levels are markedly decreased in ApoE4 compared to ApoE3 astrocytes (p < 0.0001) (Figure 5)”
Quote in the paperSubstantial claim - Findingown data
The intracellular ApoE content in immortalized ApoE4 astrocytes is less than half compared to the ApoE amount present in ApoE3 astrocytes.
“Results confirmed that the ApoE intracellular content in immortalized ApoE4 astrocytes is less than halved compared to the ApoE amount present in ApoE3 astrocytes, as shown by both immunocytochemistry (Figure 1A) and Western blotting (p < 0.0001; Figure 1B).”
- Also stated in: § 4. Discussion · plain
“Concerning ApoE levels, we observed that ApoE intracellular levels in ApoE4 astrocytes are less than half compared to the levels detected in ApoE3 astrocytes (Figure 1A,B).”
Quote in the paperSubstantial claim - Also stated in: § 4. Discussion · plain
- Findingown data
ABCA1 protein levels are substantially lower in ApoE4 astrocytes than in ApoE3 astrocytes (p < 0.0001).
“We observed that ApoE4 astrocytes are characterized by substantial lower levels of proteins involved in cholesterol efflux and uptake, i.e., the transporter ABCA1 (p < 0.0001)”
Quote in the paperSubstantial claim - Findingown data
CYP7A1 expression does not significantly change in ApoE4 astrocytes compared to ApoE3 astrocytes.
“Instead, CYP7A1 expression did not significantly change (Figure 4B).”
Quote in the paperNot a substantial claim - Findingown data
7α-OHC levels are lower in ApoE4 astrocytes than in ApoE3 astrocytes (−51%; p < 0.0001).
“whereas cholesterol oxidation to 24-OHC (−36%; p < 0.0001) and 7α-OHC (−51%; p < 0.0001) resulted in being lower”
Quote in the paperSubstantial claim - Findingown data
Desmosterol levels are lower in ApoE4 astrocytes than in ApoE3 astrocytes (−32%; p < 0.01).
“whereas desmosterol levels are lower (−32%; p < 0.01) compared to ApoE3 astrocytes”
Quote in the paperSubstantial claim - Findingown data
LXRα (NR1H3) expression is significantly lower in ApoE4 astrocytes than in ApoE3 astrocytes.
“nuclear receptor subfamily 1 group H member 3 (NR1H3, also known as LXRα; p < 0.0001)”
- Also stated in: § 4. Discussion · plain
“Interestingly, LXRα and PPARγ, key proteins involved in the regulation of lipid homeostasis [51,52], have been shown to be two of the most down-regulated genes (Figure 2).”
Quote in the paperSubstantial claim - Also stated in: § 4. Discussion · plain
- Findingown data
27-OHC levels are higher in ApoE4 astrocytes than in ApoE3 astrocytes (+72%; p < 0.001).
“Concerning the oxysterols of enzymatic origin, ApoE4 astrocytes have been shown to produce higher levels of 25-OHC (+282%; p < 0.0001) and 27-OHC (+72%; p < 0.001)”
Quote in the paperSubstantial claim - Findingown data
ApoE4 astrocytes contain altered levels of total cholesterol, cholesterol precursors, and main oxysterols.
“Interestingly, the obtained results pointed out that ApoE4 astrocytes contain altered levels of total cholesterol, cholesterol precursors, and of the main oxysterols.”
Quote in the paperSubstantial claim - Findingown data
CYP27A1 expression is significantly higher in ApoE4 astrocytes than in ApoE3 astrocytes.
“Of the genes that were found significantly more expressed in ApoE4 astrocytes, starting from the most up-regulated one, are those coding for cholesterol 27-hydroxylase (CYP27A1; p < 0.0001)”
- Also stated in: § 3.4. Oxysterol Profile Is Different in ApoE4 Astrocytes · plain
“CH25H (p < 0.0001) and CYP27A1 (p < 0.0001) gene expression levels markedly increased in ApoE4 astrocytes”
Quote in the paperSubstantial claim - Also stated in: § 3.4. Oxysterol Profile Is Different in ApoE4 Astrocytes · plain
- Findingown data
LRP1 protein levels are substantially lower in ApoE4 astrocytes than in ApoE3 astrocytes (p < 0.0001).
“and the receptors low-density lipoprotein receptor (LDLR; p < 0.0001), LDLR-related protein 1 (LRP1; p < 0.0001), and ApoE receptor 2 (ApoER2; p < 0.001) (Figure 5)”
Quote in the paperSubstantial claim - Findingown data
LDLR protein levels are substantially lower in ApoE4 astrocytes than in ApoE3 astrocytes (p < 0.0001).
“and the receptors low-density lipoprotein receptor (LDLR; p < 0.0001), LDLR-related protein 1 (LRP1; p < 0.0001), and ApoE receptor 2 (ApoER2; p < 0.001) (Figure 5)”
Quote in the paperSubstantial claim - Findingown data
Total cholesterol levels are slightly but significantly reduced in ApoE4 astrocytes compared to ApoE3 astrocytes (−14%; p < 0.05).
“Overall, total cholesterol levels are slightly but significantly reduced (−14%; p < 0.05) (Figure 3B).”
- Also stated in: § 4. Discussion · plain
“Our analysis by GC-MS pointed out that total cholesterol levels are slightly but significantly reduced in ApoE4 astrocytes in comparison to ApoE3 astrocytes (Figure 3B), similarly to what was observed by de Leeuw and colleagues in hiPSC-derived ApoE4 astrocytes [24].”
Quote in the paperSubstantial claim - Also stated in: § 4. Discussion · plain
- Findingown data
24-OHC levels are lower in ApoE4 astrocytes than in ApoE3 astrocytes (−36%; p < 0.0001).
“whereas cholesterol oxidation to 24-OHC (−36%; p < 0.0001) and 7α-OHC (−51%; p < 0.0001) resulted in being lower”
Quote in the paperSubstantial claim - Findingown data
DHCR24 expression is significantly reduced in ApoE4 astrocytes (p < 0.01).
“As shown in Figure 3C, HMGCR (p < 0.05) and DHCR24 (p < 0.01) expression levels are significantly reduced in ApoE4 astrocytes.”
Quote in the paperSubstantial claim - Findingown data
HMGCR expression is significantly reduced in ApoE4 astrocytes (p < 0.05).
“As shown in Figure 3C, HMGCR (p < 0.05) and DHCR24 (p < 0.01) expression levels are significantly reduced in ApoE4 astrocytes.”
Quote in the paperSubstantial claim - Findingown data
7-KC levels do not change significantly in ApoE4 astrocytes compared to ApoE3 astrocytes.
“and 7-KC levels did not change significantly in ApoE4 astrocytes (Figure 4A)”
Quote in the paperNot a substantial claim - Findingown data
ApoE4 astrocytes produce lower levels of 24-OHC, 7α-OHC and 7β-OHC compared to ApoE3 astrocytes.
“in our experimental model ApoE4 astrocytes have been shown to produce higher levels of the oxysterols 25-OHC and 27-OHC, but lower levels of 24-OHC, 7α-OHC and 7β-OHC compared to ApoE3 astrocytes; 7-KC levels did not change significantly (Figure 4A).”
Quote in the paperSubstantial claim - Findingcitation
The reduced ABCA1 protein levels observed in immortalized ApoE4 astrocytes confirm results obtained in mouse primary and hiPSC-derived ApoE4 astrocytes.
“The reduced ABCA1 protein levels observed in immortalized ApoE4 astrocytes (Figure 5) further confirm results obtained in mouse primary and hiPSC-derived ApoE4 astrocytes [68].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [68] Rawat, 2019, ApoE4 Alters ABCA1 Membrane Trafficking in Astrocytes, J. Neurosci. source
- Rests on an assumption: One of the main proteins responsible for ApoE lipidation in the CNS is the transporter ABCA1.
- Findingown data
Levels of several oxysterols are altered in ApoE4 astrocytes.
“as well as of the levels of several oxysterols.”
Quote in the paperSubstantial claim - Findingown data
In our experimental model, ApoE4 astrocytes produce higher levels of oxysterols 25-OHC and 27-OHC compared to ApoE3 astrocytes.
“in our experimental model ApoE4 astrocytes have been shown to produce higher levels of the oxysterols 25-OHC and 27-OHC, but lower levels of 24-OHC, 7α-OHC and 7β-OHC compared to ApoE3 astrocytes; 7-KC levels did not change significantly (Figure 4A).”
Quote in the paperSubstantial claim - Findingown data
ApoE4 astrocytes are characterized by altered expression of several genes involved in cholesterol homeostasis (e.g., synthesis, oxidation, efflux, and uptake).
“we observed that ApoE4 astrocytes are characterized by altered expression of several genes involved in cholesterol homeostasis (e.g., synthesis, oxidation, efflux, and uptake).”
Quote in the paperSubstantial claim - Findingown data
ApoE4 astrocytes show a reduction in both autoxidation (7β-OHC) and enzymatic (7α-OHC and 24-OHC) products.
“we observed a reduction in both autoxidation (i.e., 7β-OHC) and enzymatic (i.e., 7α-OHC and 24-OHC) products”
Quote in the paperSubstantial claim - Findingown data
PPARγ is reduced in ApoE4 astrocytes.
“Another key protein that we observed to be reduced in ApoE4 astrocytes is PPARγ (Figure 2 and Figure 5).”
Quote in the paperSubstantial claim - Findingreasoning
This wide range of differentially expressed genes leads to alterations of the levels of cholesterol precursors and total cholesterol.
“This wide range of differentially expressed genes leads to alterations of the levels of cholesterol precursors and total cholesterol, suggesting a potential shift toward the Kandutsch–Russell pathway, as well as of the levels of several oxysterols.”
Quote in the paperSubstantial claim - Findingreasoning
As a consequence of Bloch-pathway inhibition, lanosterol enhances.
“As a consequence of the Bloch-pathway inhibition, lanosterol enhances; to avoid accumulation of the latter, both the switch to the Kandutsch–Russell pathway and a feed-back HMGCR downregulation could occur, resulting altogether in a moderate, although significant, cholesterol decrease.”
Quote in the paperSubstantial claim - Findingown data
The oxysterols of enzymatic origin 25-OHC and 27-OHC are strikingly enhanced in ApoE4 astrocytes.
“the oxysterols of enzymatic origin 25-OHC and 27-OHC are strikingly enhanced”
Quote in the paperSubstantial claim - Findingown data
7-KC levels did not change significantly between ApoE4 and ApoE3 astrocytes.
“in our experimental model ApoE4 astrocytes have been shown to produce higher levels of the oxysterols 25-OHC and 27-OHC, but lower levels of 24-OHC, 7α-OHC and 7β-OHC compared to ApoE3 astrocytes; 7-KC levels did not change significantly (Figure 4A).”
Quote in the paperNot a substantial claim - Findingown data
25-OHC and 27-OHC appear to augment in our cell model.
“which appear to augment in our cell model”
Quote in the paperSubstantial claim - Findingown data
The expression trend of enzymes involved in oxysterol generation goes in parallel with the levels of the corresponding oxysterol.
“Interestingly, the expression trend of the enzymes involved in the oxysterol generation goes in parallel with the levels of the corresponding oxysterol.”
Quote in the paperNot a substantial claim - Interpretationown data
The ApoE genotype clearly affects astrocytic cholesterol homeostasis.
“Data showed that the ApoE genotype clearly affects astrocytic cholesterol homeostasis; however, further investigation is needed to clarify the mechanisms underlying these differences and the consequences on neighboring cells.”
Quote in the paperSubstantial claim - Premisecitation
Alterations of lipid metabolism distinguish ApoE4 astrocytes derived from human ApoE-targeted replacement mice.
“Moreover, alterations of lipid metabolism were shown to distinguish ApoE4 astrocytes deriving from human ApoE-targeted replacement (ApoE-TR) mice [17].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [17] Farmer, B.C., Kluemper, J., and Johnson, L.A. (2019). Apolipoprotein E4 Alters Astrocyte Fatty Acid Metabolism and Lipid Droplet Formation. Cells, 8. source
- Premisecitation
The strongest genetic risk factor for sporadic Alzheimer's disease is the presence of the ε4 allele of the apolipoprotein E (ApoE) gene, the major apolipoprotein involved in brain cholesterol transport.
“The strongest genetic risk factor for sporadic AD is the presence of the ε4 allele of the apolipoprotein E (ApoE) gene, the major apolipoprotein involved in brain cholesterol transport [2,3].”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [2] Corder, 1993, Gene dose of apolipoprotein E type 4 allele and the risk of Alzheimer’s disease in late onset families, Science source
- cites [3] Reiman, 2020, Exceptionally low likelihood of Alzheimer’s dementia in APOE2 homozygotes from a 5000-person neuropathological study, Nat. Commun. source
- Interpretationown data
Lipid metabolism is one of the main altered processes in ApoE4 astrocytes.
“These results, together with those obtained by transcriptomic and proteomic analyses of hiPSC-derived astrocytes [15,16], further confirm that lipid metabolism is one of the main altered processes in ApoE4 astrocytes.”
Quote in the paperSubstantial claim0 of 2 sources checked - Premisecitation
Transcriptomic studies of ApoE4 astrocytes derived from human-induced pluripotent stem cells of Alzheimer's disease patients demonstrated that lipid metabolism is one of the main altered processes.
“In this regard, transcriptomic studies of ApoE4 astrocytes deriving from human-induced pluripotent stem cells (hiPSCs) of AD patients demonstrated that lipid metabolism is one of main altered processes [15,16].”
- Also stated in: § 3.2. ApoE4 Astrocytes Show Different Expression Levels of Several Lipid-Related Genes · plain
“Transcriptomic studies showed that lipid metabolism is one of the main altered processes in ApoE4 astrocytes [15,16].”
Quote in the paperSubstantial claim0 of 2 sources checked - Also stated in: § 3.2. ApoE4 Astrocytes Show Different Expression Levels of Several Lipid-Related Genes · plain
- Premisecitation
Alterations of ApoE synthesis and release characterize hiPSC-derived ApoE4 astrocytes.
“Alterations of ApoE synthesis and release have been shown to characterize hiPSCs-derived ApoE4 astrocytes [15,16,24].”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [15] Tcw, 2022, Cholesterol and matrisome pathways dysregulated in astrocytes and microglia, Cell source
- cites [16] Lin, 2018, APOE4 Causes Widespread Molecular and Cellular Alterations Associated with Alzheimer’s Disease Phenotypes in Human iPSC-Derived Brain Cell Types, Neuron source
- cites [24] Kirschner, 2022, APOE2, E3, and E4 differentially modulate cellular homeostasis, cholesterol metabolism, and inflammatory response in isogenic iPSC-derived astrocytes, Stem Cell Rep. source
- Interpretationcitation
The trend of oxysterol concentrations in ApoE4 astrocytes compared to ApoE3 astrocytes is similar to that observed in human Alzheimer's disease brain cortices compared to healthy brains.
“Of note, the trend of the oxysterol concentrations in ApoE4 astrocytes compared to ApoE3 astrocytes was similar to that observed in human AD brain cortices compared to healthy brains [19], suggesting their potential implication in ApoE4 deleterious effects on AD risk.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [19] Testa, 2016, Changes in brain oxysterols at different stages of Alzheimer’s disease: Their involvement in neuroinflammation, Redox Biol. source
- Premisecitation
HMGCR is negatively regulated by side-chain oxidized oxysterols such as 25-OHC and 27-OHC.
“it is recognized that HMGCR is negatively regulated by side-chain oxidized oxysterols such as 25-OHC and 27-OHC [10]”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [10] Staurenghi, E., Giannelli, S., Testa, G., Sottero, B., Leonarduzzi, G., and Gamba, P. (2021). Cholesterol Dysmetabolism in Alzheimer’s Disease: A Starring Role for Astrocytes?. Antioxidants, 10. source
- Premisecitation
Metabolite levels and gene expression associated with cholesterol de novo biosynthesis are reduced in Alzheimer's disease brain regions vulnerable to Alzheimer's disease pathology.
“It has been shown that metabolite levels and gene expression associated with cholesterol de novo biosynthesis are reduced in AD brain regions vulnerable to AD pathology, probably due to impaired enzymatic cholesterol catabolism and efflux [25].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [25] Varma, 2021, Abnormal brain cholesterol homeostasis in Alzheimer’s disease-a targeted metabolomic and transcriptomic study, NPJ Aging Mech. Dis. source
- Premisecitation
PPARγ regulates ABCA1, LXRα, LPL, and GYK.
“In addition to LRP1, other genes are regulated by PPARγ such as ABCA1, LXRα, LPL, and GYK [52,83,84], and all were found to be down-regulated in ApoE4 astrocytes (Figure 2 and Figure 5).”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [52] Ahmadian, 2013, PPARgamma signaling and metabolism: The good, the bad and the future, Nat. Med. source
- cites [83] Bujold, 2009, CD36-mediated cholesterol efflux is associated with PPARgamma activation via a MAPK-dependent COX-2 pathway in macrophages, Cardiovasc. Res. source
- cites [84] Moosecker, 2021, Brain Expression, Physiological Regulation and Role in Motivation and Associative Learning of Peroxisome Proliferator-activated Receptor gamma, Neuroscience source
- Interpretationown data
The data suggest a potential shift toward the Kandutsch-Russell pathway.
“suggesting a potential shift toward the Kandutsch–Russell pathway”
Quote in the paperSubstantial claim - Premisecitation
Oxysterols accumulating in the brain play a crucial role in AD development by enhancing oxidative stress and inflammation, with consequent neurodegeneration.
“Oxysterols accumulating in the brain certainly play a crucial role in AD development by enhancing oxidative stress and inflammation, with consequent neurodegeneration [11].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [11] Gamba, 2015, Oxidized cholesterol as the driving force behind the development of Alzheimer’s disease, Front. Aging Neurosci. source
- Premisecitation
A lower effectiveness of PPARγ-targeting therapies has been observed in ApoE4 carriers.
“a lower effectiveness of PPARγ-targeting therapies has been observed in ApoE4 carriers and may be due to the impairment of PPARγ signaling mediated by ApoE4 through still unknown mechanisms [87].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [87] Iketani, 2018, Apolipoprotein E Gene Polymorphisms Affect the Efficacy of Thiazolidinediones for Alzheimer’s Disease: A Systematic Review and Meta-Analysis, Biol. Pharm. Bull. source
- Interpretationcitation
The changes in oxysterol levels in ApoE4 astrocytes somehow reflect some of those occurring in the AD brain (i.e., 24-OHC decrease, 27-OHC and 25-OHC increase).
“Results showed that the changes in oxysterol levels in ApoE4 astrocytes somehow reflect some of those occurring in the AD brain (i.e., 24-OHC decrease, 27-OHC and 25-OHC increase) [19]”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [19] Testa, 2016, Changes in brain oxysterols at different stages of Alzheimer’s disease: Their involvement in neuroinflammation, Redox Biol. source
- The authors state this as an assumption: The physiological presence of 24-OHC in the brain is fundamental to guarantee brain health.
- Interpretationcitation
Lower levels of ApoE receptors in the astrocytic membrane may lead to the reduced ability of ApoE4 astrocytes to clear Aβ.
“studies suggest that lower levels of ApoE receptors in the astrocytic membrane may lead to the reduced ability of ApoE4 astrocytes to clear Aβ [16,73].”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [16] Lin, 2018, APOE4 Causes Widespread Molecular and Cellular Alterations Associated with Alzheimer’s Disease Phenotypes in Human iPSC-Derived Brain Cell Types, Neuron source
- cites [73] Prasad, 2018, Amyloid clearance defect in ApoE4 astrocytes is reversed by epigenetic correction of endosomal pH, Proc. Natl. Acad. Sci. USA source
- Premisecitation
Astrocytic LDLR and LRP1 are involved in Aβ uptake and clearance.
“astrocytic LDLR and LRP1 have been shown to be involved in Aβ uptake and clearance, as confirmed by the significant change in Aβ accumulation observed in experimental models characterized by the knockdown or the overexpression of one of these two receptors [50,64,76]”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [50] Basak, 2012, Low-density lipoprotein receptor represents an apolipoprotein E-independent pathway of Abeta uptake and degradation by astrocytes, J. Biol. Chem. source
- cites [64] Liu, 2017, Astrocytic LRP1 Mediates Brain Abeta Clearance and Impacts Amyloid Deposition, J. Neurosci. source
- cites [76] Kim, 2009, Overexpression of low-density lipoprotein receptor in the brain markedly inhibits amyloid deposition and increases extracellular A beta clearance, Neuron source
- Interpretationown data
This study highlighted new ApoE4-induced alterations concerning astrocytic cholesterol metabolism.
“this study highlighted new ApoE4-induced alterations that concern astrocytic cholesterol metabolism, providing support for further investigations on the specific molecular mechanisms involved and the potential consequences on AD pathology.”
Quote in the paperSubstantial claim - Interpretationown data
Factors such as gene modulation could affect the formation of 25-OHC and 27-OHC more than cholesterol amount, as suggested by CH25H and CYP27A1 significant up-regulation.
“these data indicate that factors, such as gene modulation, could affect the formation of these oxysterols more than cholesterol amount, as suggested by CH25H and CYP27A1 significant up-regulation.”
Quote in the paperSubstantial claim - Interpretationreasoning
The presence of ApoE4 genotype might affect one or more enzymes involved in the post-lanosterol phases of cholesterol synthesis.
“Therefore, the presence of ApoE4 genotype might affect one or more enzymes involved in the post-lanosterol phases of cholesterol synthesis.”
Quote in the paperSubstantial claim - Premisecitation
Changes in oxysterol levels in the brain could be one of the factors contributing to AD progression.
“Considerable evidence indicates that changes in oxysterol levels in the brain could be one of the factors contributing to AD progression.”
Quote in the paperNot a substantial claim0 of 2 sources checked - Interpretationown data
One of the reasons for these alterations may be the significant down-regulation of LXRα and PPARγ, both key regulators of lipid homeostasis.
“One of the reasons for these alterations may be the significant down-regulation of LXRα and PPARγ, both key regulators of lipid homeostasis.”
Quote in the paperSubstantial claim - Interpretationreasoning
The reduction in 7β-OHC, 7α-OHC, and 24-OHC could be due, at least in part, to less availability of the oxysterol precursor cholesterol in ApoE4 astrocytes.
“which, at least in part, could be due to a less availability in ApoE4 astrocytes of the oxysterol precursor, namely cholesterol itself.”
Quote in the paperSubstantial claim - Interpretationreasoning
25-OHC and 27-OHC are possible important co-factors in ApoE4 astrocyte cholesterol synthesis.
“this evidence points to these oxysterols as possible important co-factors in ApoE4 astrocyte cholesterol synthesis.”
Quote in the paperSubstantial claim - Interpretationcitation
The lower effectiveness of PPARγ-targeting therapies in ApoE4 carriers may be due to impairment of PPARγ signaling mediated by ApoE4 through still unknown mechanisms.
“a lower effectiveness of PPARγ-targeting therapies has been observed in ApoE4 carriers and may be due to the impairment of PPARγ signaling mediated by ApoE4 through still unknown mechanisms [87].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [87] Iketani, 2018, Apolipoprotein E Gene Polymorphisms Affect the Efficacy of Thiazolidinediones for Alzheimer’s Disease: A Systematic Review and Meta-Analysis, Biol. Pharm. Bull. source
- Premisecitation
24-OHC has mainly neuroprotective properties, such as preventing tau hyperphosphorylation and Aβ production.
“24-OHC has been shown to have mainly neuroprotective properties, such as preventing tau hyperphosphorylation and Aβ production [66,67].”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [66] Testa, 2018, A silver lining for 24-hydroxycholesterol in Alzheimer’s disease: The involvement of the neuroprotective enzyme sirtuin 1, Redox Biol. source
- cites [67] Gamba, P., Giannelli, S., Staurenghi, E., Testa, G., Sottero, B., Biasi, F., Poli, G., and Leonarduzzi, G. (2021). The Controversial Role of 24-S-Hydroxycholesterol in Alzheimer’s Disease. Antioxidants, 10. source
- Interpretationown data
In ApoE4 astrocytes, cholesterol anabolism shifts from the Bloch pathway to the Kandutsch-Russell pathway, as suggested by desmosterol decrease and lathosterol increase.
“Based on this evidence, it could be assumed that in ApoE4 astrocytes cholesterol anabolism shifts from the Bloch pathway to the Kandutsch–Russell pathway, as suggested by desmosterol decrease and lathosterol increase.”
Quote in the paperSubstantial claim - Premisecitation
ABCA1 reduction is considered one of the reasons why ApoE4-containing lipoproteins are poorly lipidated.
“ABCA1 reduction is considered one of the reasons why ApoE4-containing lipoproteins are poorly lipidated [69,70]”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [69] Hu, 2015, Opposing effects of viral mediated brain expression of apolipoprotein E2 (apoE2) and apoE4 on apoE lipidation and Abeta metabolism in apoE4-targeted replacement mice, Mol. Neurodegener. source
- cites [70] Heinsinger, 2016, Apolipoprotein E Genotype Affects Size of ApoE Complexes in Cerebrospinal Fluid, J. Neuropathol. Exp. Neurol. source
- Rests on an assumption: One of the main proteins responsible for ApoE lipidation in the CNS is the transporter ABCA1.
- Interpretationown data
The marked reduction in ABCA1 may be due to down-regulation of LXRα expression.
“This marked reduction may be due to the down-regulation of the expression levels of the nuclear receptor LXRα (Figure 2), a key regulator of ABCA1 expression [51].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [51] Courtney, 2016, LXR Regulation of Brain Cholesterol: From Development to Disease, Trends Endocrinol. Metab. source
- Rests on an assumption: One of the main proteins responsible for ApoE lipidation in the CNS is the transporter ABCA1.
- Interpretationown data
Data from this study might highlight another feature of ApoE4 astrocytes that could further explain ApoE4 AD-promoting role by affecting the levels of cholesterol oxidized derivatives.
“Data from this study might highlight another feature of ApoE4 astrocytes that could further explain ApoE4 AD-promoting role by affecting the levels of cholesterol oxidized derivatives.”
Quote in the paperSubstantial claim- The authors state this as an assumption: The physiological presence of 24-OHC in the brain is fundamental to guarantee brain health.
- Interpretationreasoning
The decrease in LRP1 observed in ApoE4 astrocytes may be due to the dramatic decline in PPARγ levels that characterizes this cell line.
“suggesting that the decrease in LRP1 observed in ApoE4 astrocytes may be also due to the dramatic decline in PPARγ levels that characterizes this cell line (Figure 5).”
Quote in the paperNot a substantial claim - Premisecitation
Reduced PPARγ expression and protein levels characterize the brain of ApoE4-TR mice.
“reduced PPARγ expression and protein levels have been observed to characterize the brain of ApoE4-TR mice [79].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [79] Keeney, 2015, Human ApoE Isoforms Differentially Modulate Glucose and Amyloid Metabolic Pathways in Female Brain: Evidence of the Mechanism of Neuroprotection by ApoE2 and Implications for Alzheimer’s Disease Prevention and Early Intervention, J. Alzheimers Dis. source
- Interpretationreasoning
PPARγ down-regulation could be one of the leading causes of the alterations in cholesterol metabolism observed in ApoE4 astrocytes.
“Overall, these data suggest that PPARγ down-regulation could be one of the leading causes of the alterations in cholesterol metabolism that we observed in ApoE4 astrocytes.”
Quote in the paperSubstantial claim
- It may state two separate claims as one. 24
- Probably not a substantial claim. 16
It may state two separate claims as one.
PremisecitationCholesterol homeostasis is impaired in ApoE4 astrocytes, although controversial data concerning intracellular and secreted cholesterol levels are present in the literature depending on the experimental model employed.
“Recently, it has been shown that cholesterol homeostasis is also impaired in ApoE4 astrocytes, although controversial data concerning intracellular and secreted cholesterol levels are present in literature depending on the different experimental model employed [15,16,24].”
Quote in the paperSubstantial claim3 of 3 sources checked- cites [15] Tcw, 2022, Cholesterol and matrisome pathways dysregulated in astrocytes and microglia, Cell source
The Results section, “Impaired cholesterol trafficking in APOE4 astrocytes and microglia” (page unavailable), reports increased intracellular cholesterol and reduced cholesterol efflux in APOE4 astrocytes, supporting impaired cholesterol homeostasis. The Discussion contrasts efflux findings from rat and mouse models, but the paper does not establish that reported intracellular and secreted cholesterol levels themselves conflict across experimental models. (LLM, conf=0.84)
Experimental — accuracy not yet measured - cites [16] Lin, 2018, APOE4 Causes Widespread Molecular and Cellular Alterations Associated with Alzheimer’s Disease Phenotypes in Human iPSC-Derived Brain Cell Types, Neuron source
The Results section (‘APOE4 astrocytes exhibit compromised Aβ uptake’; page unavailable) reports altered cholesterol metabolism and higher cellular and secreted cholesterol in APOE4 than APOE3 iPSC-derived astrocytes. The paper does not establish the claimed controversy over intracellular and secreted cholesterol levels across experimental models; its discussion of conflicting findings concerns APOE protein levels instead. (LLM, conf=0.84)
Experimental — accuracy not yet measured - cites [24] Kirschner, 2022, APOE2, E3, and E4 differentially modulate cellular homeostasis, cholesterol metabolism, and inflammatory response in isogenic iPSC-derived astrocytes, Stem Cell Rep. source
The Results section, “Cholesterol and lipid metabolism show APOE allele-dependent regulation” (page unavailable), reports reduced cellular and secreted cholesterol in APOE4 iAstrocytes, alongside increased non-membrane-bound cholesterol. This supports altered cholesterol homeostasis, but the paper does not establish that conflicting findings in the literature depend on the experimental model used. (LLM, conf=0.83)
Experimental — accuracy not yet measured
It may state two separate claims as one.
Findingown dataThe expression levels of 43 lipid-related genes were analysed in both ApoE3 and ApoE4 astrocytes, and several genes were up- or down-regulated in ApoE4 compared to ApoE3 astrocytes.
“In order to investigate this aspect, the expression levels of 43 lipid-related genes were analysed in both ApoE3 and ApoE4 astrocytes and several genes resulted to be up- or down-regulated in ApoE4 compared to ApoE3 astrocytes (Figure 2).”
Quote in the paperSubstantial claimProbably not a substantial claim. The paper’s conclusions may not depend on it. It may state two separate claims as one.
Findingown dataThe two cell lines have a different morphology, with ApoE4 astrocytes being smaller than ApoE3 astrocytes.
“As shown in Figure 1A, the two cell lines have a different morphology, with ApoE4 astrocytes resulting as smaller compared to ApoE3 astrocytes.”
Quote in the paperNot a substantial claimIt may state two separate claims as one.
Findingown dataApoE intracellular and extracellular content, as well as the levels of the ABCA1 transporter and the receptors LDLR, LRP1, and ApoER2, resulted to be impaired in ApoE4 astrocytes.
“Moreover, ApoE intracellular and extracellular content, as well as the levels of the ABCA1 transporter and the receptors LDLR, LRP1, and ApoER2 resulted to be impaired in ApoE4 astrocytes.”
Quote in the paperSubstantial claim- Rests on an assumption: One of the main proteins responsible for ApoE lipidation in the CNS is the transporter ABCA1.
It may state two separate claims as one.
Findingown dataCYP46A1 and CYP7A1 reduction is followed by 24-OHC and 7α-OHC reduction, respectively; conversely, CYP27A1 and CH25H increase is followed by 27-OHC and 25-OHC increase.
“In fact, CYP46A1 and CYP7A1 reduction is followed by 24-OHC and 7α-OHC reduction, respectively; conversely, CYP27A1 and CH25H increase is followed by 27-OHC and 25-OHC increase (Figure 4B).”
Quote in the paperSubstantial claimIt may state two separate claims as one.
Findingown dataABCA1, LXRα, LPL, and GYK are down-regulated in ApoE4 astrocytes.
“In addition to LRP1, other genes are regulated by PPARγ such as ABCA1, LXRα, LPL, and GYK [52,83,84], and all were found to be down-regulated in ApoE4 astrocytes (Figure 2 and Figure 5).”
Quote in the paperSubstantial claimIt may state two separate claims as one.
PremisecitationIn the brain, most cholesterol is produced de novo by astrocytes and then transported to neurons and other cells by combining with ApoE, mainly synthesized by astrocytes, to form lipoproteins secreted through ATP-binding cassette transporters.
“In the brain most cholesterol is produced de novo by astrocytes, and then transported to neurons and other cells by combining with ApoE, mainly synthesized by astrocytes, to form lipoproteins that are secreted through the ATP-binding cassette (ABC) transporters [9,10].”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [9] Holtzman, 2012, Apolipoprotein E and apolipoprotein E receptors: Normal biology and roles in Alzheimer disease, Cold Spring Harb. Perspect. Med. source
- cites [10] Staurenghi, E., Giannelli, S., Testa, G., Sottero, B., Leonarduzzi, G., and Gamba, P. (2021). Cholesterol Dysmetabolism in Alzheimer’s Disease: A Starring Role for Astrocytes?. Antioxidants, 10. source
Probably not a substantial claim. The paper’s conclusions may not depend on it.
PremisecitationThe association between cholesterol homeostasis alterations and Alzheimer's disease onset and progression has been evident for many years.
“The association between cholesterol homeostasis alterations and AD onset and progression has been evident for many years [11,12,13].”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [11] Gamba, 2015, Oxidized cholesterol as the driving force behind the development of Alzheimer’s disease, Front. Aging Neurosci. source
- cites [12] Goikolea, 2019, Alterations in cholesterol metabolism as a risk factor for developing Alzheimer’s disease: Potential novel targets for treatment, J. Steroid Biochem. Mol. Biol. source
- cites [13] Zarrouk, 2018, Lipid Biomarkers in Alzheimer’s Disease, Curr. Alzheimer Res. source
Probably not a substantial claim. The paper’s conclusions may not depend on it.
PremisecitationApoE4 increases the risk of developing Alzheimer's disease by three to twelve times depending on whether the ε4 allele is present in heterozygosis or homozygosis.
“In contrast to the most common isoform ApoE3, present in 78% of the population, ApoE4 increases the risk of developing AD by three to twelve times depending on whether the ε4 allele is present in heterozygosis or homozygosis [3].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [3] Reiman, 2020, Exceptionally low likelihood of Alzheimer’s dementia in APOE2 homozygotes from a 5000-person neuropathological study, Nat. Commun. source
Probably not a substantial claim. The paper’s conclusions may not depend on it.
PremisecitationCholesterol oxidation products (oxysterols) that accumulate in the brain are key actors in Alzheimer's disease pathogenesis because they lead to neuron dysfunction and degeneration, mainly by enhancing oxidative stress and inflammation.
“For instance, cholesterol oxidation products (i.e., oxysterols) that accumulate in the brain are key actors in AD pathogenesis because they lead to neuron dysfunction and degeneration, mainly by enhancing oxidative stress and inflammation [11,14].”
Quote in the paperNot a substantial claim0 of 2 sources checkedIt may state two separate claims as one.
PremisecitationChanges in lipid metabolism, in particular cholesterol metabolism, predispose to Alzheimer's disease and play a substantial role in different phases of the disease.
“Indeed, changes in lipid metabolism, in particular that of cholesterol, predispose to AD playing a substantial role in the different phases of the disease [4].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [4] Kim, 2011, Linking lipids to Alzheimer’s disease: Cholesterol and beyond, Nat. Rev. Neurosci. source
Probably not a substantial claim. The paper’s conclusions may not depend on it. It may state two separate claims as one.
PremisecitationThe ApoE4 isoform affects lipid and glucose metabolism and many other processes involved in Alzheimer's disease pathology, including Aβ clearance, neuroinflammation, and synaptic function.
“Indeed, the ApoE4 isoform has been shown to affect lipid and glucose metabolism, but also many other processes involved in AD pathology including Aβ clearance, neuroinflammation, and synaptic function [5]”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [5] Liu, 2013, Apolipoprotein E and Alzheimer disease: Risk, mechanisms and therapy, Nat. Rev. Neurol. source
It may state two separate claims as one.
PremisecitationApoE4 has been shown to impact many physiological functions played by astrocytes, affecting their ability to clear Aβ, uptake glutamate, promote neuronal synaptogenesis, and maintain lipid homeostasis.
“ApoE4 has been shown to impact on many physiological functions played by astrocytes, affecting their ability to clear Aβ, to uptake glutamate, to promote neuronal synaptogenesis, and to maintain lipid homeostasis [15,16,42].”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [15] Tcw, 2022, Cholesterol and matrisome pathways dysregulated in astrocytes and microglia, Cell source
- cites [16] Lin, 2018, APOE4 Causes Widespread Molecular and Cellular Alterations Associated with Alzheimer’s Disease Phenotypes in Human iPSC-Derived Brain Cell Types, Neuron source
- cites [42] Zhao, 2017, APOE epsilon4/epsilon4 diminishes neurotrophic function of human iPSC-derived astrocytes, Hum. Mol. Genet. source
It may state two separate claims as one.
PremisecitationSignificantly reduced ApoE levels were observed in hiPSC-derived ApoE4 astrocytes and in brain homogenates from mouse models expressing the human ApoE4 isoform.
“In agreement with our data, significantly reduced ApoE levels were also observed in hiPSC-derived ApoE4 astrocytes [15,16,24], as well as in brain homogenates from mouse models expressing the human ApoE4 isoform [43,44].”
Quote in the paperNot a substantial claim0 of 5 sources checked- cites [15] Tcw, 2022, Cholesterol and matrisome pathways dysregulated in astrocytes and microglia, Cell source
- cites [16] Lin, 2018, APOE4 Causes Widespread Molecular and Cellular Alterations Associated with Alzheimer’s Disease Phenotypes in Human iPSC-Derived Brain Cell Types, Neuron source
- cites [24] Kirschner, 2022, APOE2, E3, and E4 differentially modulate cellular homeostasis, cholesterol metabolism, and inflammatory response in isogenic iPSC-derived astrocytes, Stem Cell Rep. source
- cites [43] Sullivan, 2011, Reduced levels of human apoE4 protein in an animal model of cognitive impairment, Neurobiol. Aging source
- cites [44] Bales, 2009, Human APOE isoform-dependent effects on brain beta-amyloid levels in PDAPP transgenic mice, J. Neurosci. source
Probably not a substantial claim. The paper’s conclusions may not depend on it. It may state two separate claims as one.
PremisecitationApoE4 may contribute to Alzheimer's disease pathogenesis by affecting neuronal structure and function, Aβ production and clearance, tau pathology, and neuroinflammation.
“Although the role of ApoE4 in AD onset and progression remains unclear, many studies pointed out that ApoE4 may contribute to AD pathogenesis affecting neuronal structure and function, Aβ production and clearance, tau pathology, and neuroinflammation [40].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [40] Koutsodendris, 2022, Apolipoprotein E and Alzheimer’s Disease: Findings, Hypotheses, and Potential Mechanisms, Annu. Rev. Pathol. source
Probably not a substantial claim. The paper’s conclusions may not depend on it. It may state two separate claims as one.
PremisecitationThe maintenance of cholesterol homeostasis in the brain is essential for neuronal functioning, and abnormal brain cholesterol metabolism is associated with neurodegenerative diseases such as Alzheimer's disease.
“The maintenance of cholesterol homeostasis in the brain is essential for neuronal functioning and the abnormal brain cholesterol metabolism is associated with neurodegenerative diseases, such as AD [25].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [25] Varma, 2021, Abnormal brain cholesterol homeostasis in Alzheimer’s disease-a targeted metabolomic and transcriptomic study, NPJ Aging Mech. Dis. source
It may state two separate claims as one.
Premisecitation7α-OHC, 7β-OHC, and 24-OHC are primarily involved in cholesterol homeostasis regulation, while 25-OHC and 27-OHC are signalling molecules also involved in anti-viral, immunomodulant and inflammatory responses.
“while 7α-OHC, 7β-OHC, and 24-OHC are primarily involved in cholesterol homeostasis regulation, 25-OHC and 27-OHC are signalling molecules also involved in anti-viral, immunomodulant and inflammatory responses [20]”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [20] Civra, 2019, Antiviral oxysterols are present in human milk at diverse stages of lactation, J. Steroid Biochem. Mol. Biol. source
Probably not a substantial claim. The paper’s conclusions may not depend on it. It may state two separate claims as one.
PremisecitationApoE can be degraded by autophagy and by an LC3-associated endocytosis-like process, and ApoE4 is sequestered in enlarged endosomes.
“However, it appears that ApoE can be degraded by autophagy and by an LC3-associated endocytosis-like process, and that ApoE4 is sequestered in enlarged endosomes [46].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [46] Fote, 2022, Isoform-dependent lysosomal degradation and internalization of apolipoprotein E requires autophagy proteins, J. Cell Sci. source
Probably not a substantial claim. The paper’s conclusions may not depend on it. It may state two separate claims as one.
Premisecitation24-OHC is the main oxysterol involved in brain cholesterol homeostasis, derives from cholesterol oxidation by CYP46A1, and regulates the expression and synthesis of proteins involved in cholesterol synthesis and efflux, including ApoE and ABCA1/ABCG1.
“The main oxysterol involved in this process is 24-OHC, also called cerebrosterol, which derives from cholesterol oxidation by CYP46A1, a cytochrome P-450 enzyme mainly expressed by neurons but also by astrocytes [55].”
- Also stated in: § 4. Discussion · plain
“Moreover, 24-OHC, being an LXR ligand, regulates the expression and synthesis of the proteins involved in cholesterol synthesis and efflux, including ApoE and ABCA1/ABCG1 [59].”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [55] Milagre, 2008, Transcriptional regulation of the human CYP46A1 brain-specific expression by Sp transcription factors, J. Neurochem. source
- cites [59] Abildayeva, 2006, 24(S)-hydroxycholesterol participates in a liver X receptor-controlled pathway in astrocytes that regulates apolipoprotein E-mediated cholesterol efflux, J. Biol. Chem. source
- Also stated in: § 4. Discussion · plain
It may state two separate claims as one.
InterpretationreasoningApoE4 astrocytes undergo differentiation into a microglia-like phenotype, more involved in immune response than in cholesterol supply for neuronal function and development.
“further suggesting an ApoE4 astrocyte differentiation into a microglia-like phenotype, more involved in immune response than in cholesterol supply for neuronal function and development.”
Quote in the paperSubstantial claimProbably not a substantial claim.
PremisecitationPPARγ regulates the transcription of several genes involved in late-onset AD, including ApoE.
“Barrera and colleagues showed that PPARγ regulates the transcription of several genes involved in late-onset AD, including ApoE [80].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [80] Barrera, J., Subramanian, S., and Chiba-Falek, O. (2018). Probing the role of PPARgamma in the regulation of late-onset Alzheimer’s disease-associated genes. PLoS ONE, 13. source
Probably not a substantial claim. It may state two separate claims as one.
PremisecitationPPARγ is a ligand-modulated transcription factor which, through heterodimers with RXR, regulates expression of genes involved in lipid and glucose metabolism; it also exerts a neuroprotective and anti-inflammatory role in the CNS.
“PPARγ is a ligand-modulated transcription factor which, through the formation of heterodimers with the retinoid X receptor (RXR), regulates the expression of genes involved in lipid and glucose metabolism [52]; in addition, it is known to exert a neuroprotective and anti-inflammatory role in the CNS [77,78].”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [52] Ahmadian, 2013, PPARgamma signaling and metabolism: The good, the bad and the future, Nat. Med. source
- cites [77] Storer, 2005, Peroxisome proliferator-activated receptor-gamma agonists inhibit the activation of microglia and astrocytes: Implications for multiple sclerosis, J. Neuroimmunol. source
- cites [78] Gillespie, 2011, Role of PPARgamma, a nuclear hormone receptor in neuroprotection, Indian J. Biochem. Biophys.
Probably not a substantial claim.
PremisecitationPPARγ regulates LRP1 protein levels in adipocytes and hepatocytes.
“PPARγ has been shown to regulate LRP1 protein levels in adipocytes and hepatocytes [81,82]”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [81] Gauthier, 2003, Adipocyte low density lipoprotein receptor-related protein gene expression and function is regulated by peroxisome proliferator-activated receptor gamma, J. Biol. Chem. source
- cites [82] Gugnani, 2017, High Concentrations of Rosiglitazone Reduce mRNA and Protein Levels of LRP1 in HepG2 Cells, Front. Pharmacol. source
Probably not a substantial claim. The paper’s conclusions may not depend on it. It may state two separate claims as one.
PremisecitationLDLR, LRP1 and ApoER2 receptors are also present in astrocytes and have been shown to be involved in Aβ clearance mediated by astrocytes.
“However, LDLR, LRP1 and ApoER2 receptors are also present in astrocytes [15,24,63] and have been also shown to be involved in the Aβ clearance mediated by astrocytes [50,64].”
Quote in the paperNot a substantial claim0 of 5 sources checked- cites [15] Tcw, 2022, Cholesterol and matrisome pathways dysregulated in astrocytes and microglia, Cell source
- cites [24] Kirschner, 2022, APOE2, E3, and E4 differentially modulate cellular homeostasis, cholesterol metabolism, and inflammatory response in isogenic iPSC-derived astrocytes, Stem Cell Rep. source
- cites [63] Fan, 2001, Expression and regulation of apolipoprotein E receptors in the cells of the central nervous system in culture: A review, J. Am. Aging Assoc. source
- cites [50] Basak, 2012, Low-density lipoprotein receptor represents an apolipoprotein E-independent pathway of Abeta uptake and degradation by astrocytes, J. Biol. Chem. source
- cites [64] Liu, 2017, Astrocytic LRP1 Mediates Brain Abeta Clearance and Impacts Amyloid Deposition, J. Neurosci. source
Probably not a substantial claim. The paper’s conclusions may not depend on it.
InterpretationcitationThe shift to the Kandutsch-Russell pathway might reflect a sort of astrocyte polarization to a cell-type more specialized in immune responses.
“while the Bloch pathway generally appears as typical for astrocytes, microglia cells seem to preferentially resort to the Kandutsch–Russell pathway; thus, the shift to this enzymatic cascade might reflect a sort of astrocyte polarization to a cell-type more specialized in immune responses [53].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [53] Qian, 2022, Balancing cholesterol in the brain: From synthesis to disposal, Explor. Neuroprotective Ther. source
Probably not a substantial claim.
PremisecitationApoE is able to bind various receptors such as LDLR, LRP1, and ApoER2, through which ApoE-containing lipoproteins are taken up by cells.
“ApoE is able to bind various receptors such as LDLR, LRP1, and ApoER2, through which ApoE-containing lipoproteins are taken up by cells [9].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [9] Holtzman, 2012, Apolipoprotein E and apolipoprotein E receptors: Normal biology and roles in Alzheimer disease, Cold Spring Harb. Perspect. Med. source
It may state two separate claims as one.
PremisecitationNumerous oxysterols accumulate in the brain as AD progresses (e.g., 27-OHC, 25-OHC, 7α- and 7β-OHC, and 7-KC); conversely, 24-OHC levels drop dramatically in late stages of the disease likely due to neuronal loss.
“it has been demonstrated that numerous oxysterols accumulate in the brain as AD progresses (e.g., 27-OHC, 25-OHC, 7α- and 7β-OHC, and 7-KC); conversely, the levels of 24-OHC drop dramatically in the late stages of the disease likely due to neuronal loss [19,65].”
Quote in the paperSubstantial claim0 of 2 sources checkedIt may state two separate claims as one.
PremisecitationTreatment of different mouse models expressing ApoE4 with the ABCA1 agonist CS-6253 or the LXR agonist T0901317 increases ApoE4 lipidation and reduces ApoE4-driven Aβ accumulation and cognitive deficits.
“the treatment of different mouse models expressing ApoE4 with the ABCA1 agonist CS-6253 or the LXR agonist T0901317 have been shown to increase ApoE4 lipidation, as well as to reduce ApoE4-driven Aβ accumulation and cognitive deficits [71,72].”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [71] Michaelson, 2014, Reversal of apoE4-driven brain pathology and behavioral deficits by bexarotene, J. Neurosci. source
- cites [72] Carter, A.Y., Letronne, F., Fitz, N.F., Mounier, A., Wolfe, C.M., Nam, K.N., Reeves, V.L., Kamboh, H., Lefterov, I., and Koldamova, R. (2017). Liver X receptor agonist treatment significantly affects phenotype and transcriptome of APOE3 and APOE4 Abca1 haplo-deficient mice. PLoS ONE, 12. source
- Rests on an assumption: One of the main proteins responsible for ApoE lipidation in the CNS is the transporter ABCA1.
It may state two separate claims as one.
PremisecitationApoE4 is able to reduce recycling of the three receptors to the cell membrane, likely because of aberrant endosomal acidification that traps receptors within intracellular compartments and leads to their degradation.
“several studies showed that ApoE4 is able to reduce their recycling to the cell membrane, likely because of the aberrant endosomal acidification that traps receptors within the intracellular compartments and leads to their degradation [73,74,75].”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [73] Prasad, 2018, Amyloid clearance defect in ApoE4 astrocytes is reversed by epigenetic correction of endosomal pH, Proc. Natl. Acad. Sci. USA source
- cites [74] Kim, M., and Bezprozvanny, I. (2021). Differences in Recycling of Apolipoprotein E3 and E4-LDL Receptor Complexes-A Mechanistic Hypothesis. Int. J. Mol. Sci., 22. source
- cites [75] Xian, 2018, Reversal of ApoE4-induced recycling block as a novel prevention approach for Alzheimer’s disease, eLife source
It may state two separate claims as one.
InterpretationreasoningTo avoid lanosterol accumulation, both a switch to the Kandutsch-Russell pathway and a feedback HMGCR downregulation could occur, resulting in a moderate but significant cholesterol decrease.
“As a consequence of the Bloch-pathway inhibition, lanosterol enhances; to avoid accumulation of the latter, both the switch to the Kandutsch–Russell pathway and a feed-back HMGCR downregulation could occur, resulting altogether in a moderate, although significant, cholesterol decrease.”
Quote in the paperSubstantial claimProbably not a substantial claim. The paper’s conclusions may not depend on it. It may state two separate claims as one.
PremisecitationThe Bloch pathway generally appears as typical for astrocytes, while microglia cells seem to preferentially resort to the Kandutsch-Russell pathway.
“while the Bloch pathway generally appears as typical for astrocytes, microglia cells seem to preferentially resort to the Kandutsch–Russell pathway; thus, the shift to this enzymatic cascade might reflect a sort of astrocyte polarization to a cell-type more specialized in immune responses [53].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [53] Qian, 2022, Balancing cholesterol in the brain: From synthesis to disposal, Explor. Neuroprotective Ther. source
The paper relies on this without support.
The molecular mechanisms underlying ApoE4-induced pathogenic processes are not yet clear.
“however, the molecular mechanisms underlying ApoE4-induced pathogenic processes are not yet clear.”
The paper relies on this without support.
Cholesterol in the brain derives almost exclusively (>95%) from local de novo synthesis by astrocytes.
“Thus, cholesterol in the brain derives almost exclusively (>95%) from local de novo synthesis by astrocytes from Acetyl-CoA through reactions catalyzed by over 20 enzymes.”
The authors state this as an assumption.
The physiological presence of 24-OHC in the brain is fundamental to guarantee brain health.
“This leads to the likely assumption that the physiological presence of this oxysterol in the brain is fundamental to guarantee brain health, suggesting the importance of preventing its loss in the brain during the course of AD [67].”
The paper relies on this without support.
One of the main proteins responsible for ApoE lipidation in the CNS is the transporter ABCA1.
“One of the main proteins responsible for ApoE lipidation in the CNS is the transporter ABCA1.”
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
Each contradiction between two passages listed here was confirmed by an independent check.
Discussion describes CYP7A1 as reduced despite a nonsignificant result
MinorThe Results state that CYP7A1 expression did not change significantly, but the Discussion describes a CYP7A1 reduction as accompanying the decrease in 7α-OHC. A nonsignificant directional trend may exist, but the reported result does not establish the reduction claimed in the Discussion.
“In fact, CYP46A1 and CYP7A1 reduction is followed by 24-OHC and 7α-OHC reduction, respectively; conversely, CYP27A1 and CH25H increase is followed by 27-OHC and 25-OHC increase (Figure 4B).”
“Instead, CYP7A1 expression did not significantly change (Figure 4B).”
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Iketani, R., Ohno, K., Kawasaki, Y., Matsumoto, K., Yamada, H., & Kishino, S. (2018) · Biological and Pharmaceutical Bulletin · doi:10.1248/bpb.b17-00929 · Cited by 10
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1 of the 89 references couldn’t be matched to a known paper.
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Cell type‐specific roles of APOE4 in Alzheimer disease
Blumenfeld, J., Yip, O., Kim, M. J., & Huang, Y. (2024) · Nature Reviews Neuroscience · doi:10.1038/s41583-023-00776-9 · Cited by 202
Dias, D., Portugal, C. C., Relvas, J. B., & Socodato, R. (2025) · Cells · doi:10.3390/cells14040243 · Cited by 71
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Alshahrani, S. M., Al-Kuraishy, H. M., Al-Gareeb, A. I., Albuhadily, A. K., Shokr, M. M., Kadasah, S. F., Alexiou, A. T., Papadakis, M., & Batiha, G. E. (2025) · European Journal of Pharmacology · doi:10.1016/j.ejphar.2025.177830 · Cited by 27
Cell type-specific functions of Alzheimer's disease endocytic risk genes
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“Of note, ApoE4-immortalized mouse astrocytes exhibited lower cholesterol levels than ApoE3 ones [29].”
Self-citationHu, Z., Yuan, Y.-Q., Tong, Z., Liao, M., Yuan, S., Jian, Y., Yang, J.-L., & Liu, W. (2023) · Molecular Neurobiology · doi:10.1007/s12035-023-03529-y · Cited by 13
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Hypercholesterolemia drives microglial dysfunction and weakens response to amyloid plaques
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Recent advances in Alzheimer’s disease: From molecular mechanisms to therapeutic strategies
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Self-citationImpaired cellular copper regulation in the presence of ApoE4
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Aging and brain free cholesterol concentration on amyloid‐β peptide accumulation in guinea pigs
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Self-citationGenome-scale metabolic modeling uncovers cell-type specific signatures associated with APOE variants
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Metadata
- Authors
- Staurenghi, E., Leoni, V., Lo Iacono, M., Sottero, B., Testa, G., Giannelli, S., Leonarduzzi, G., & Gamba, P.
- Affiliations
- University of Turin (IT)
- University of Milano-Bicocca (IT)
- Department of Clinical and Biological Sciences, University of Turin, Orbassano, 10043 Turin, Italy
- Corresponding author
- Gamba, Paola
- ORCID
- Venue
- Antioxidants
- Publisher
- MDPI AG
- Published
- 2022-11-01
- Volume
- 11
- Issue
- 11
- Pages
- 2168
- ISSN
- 2076-3921 (ISSN-L)
- PMC
- PMC9686673
- OpenAlex
- W4308332976
- Cited by
- 24
- References
- 89
- Citations by year
- 2026: 7 · 2025: 8 · 2024: 8 · 2023: 1
- FWCI
- 1.81
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- Antioxidants (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Institutional Research Information System University of Turin (University of Turin) (submittedVersion, other-oa)
- BOA (University of Milano-Bicocca) (submittedVersion, cc-by)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Funders
- University of Turin (LEOG_RILO_21_01, GAMP_RILO_21_01, 2019-ATE-0481)
- University of Milano-Bicocca (LEOG_RILO_21_01, GAMP_RILO_21_01, 2019-ATE-0481)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Biochemistry › Cholesterol and Lipid Metabolism
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Alzheimer's disease research and treatments
- Health Sciences › Medicine › Cardiology and Cardiovascular Medicine › Lipoproteins and Cardiovascular Health
- Keywords
- apolipoprotein E, APOE ε4, APOE3, astrocytes, cholesterol homeostasis, Alzheimer's disease, oxysterols, lipid metabolism genes, PPARγ, liver X receptor alpha, CYP27A1, ApoER2, ABCA1, LDL receptor, LRP1, apoE secretion, lipid transfer proteins
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
A language model drew the claims from the paper on 2026-11-10, under version 3 of the claim definition (model deepseek-v4.1-flash, prompt extract-v3).
A second model labelled each claim on 2026-11-10 (model jev-1.13-20260917, definition revision gold-guideline-v0.2).
Cited sources are checked with a language model’s help (gpt-6-sol).
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
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