Mitochondrial response to nutrient availability and its role in metabolic disease
Open accessAbstract
Metabolic inflexibility is defined as an impaired capacity to switch between different energy substrates and is a hallmark of insulin resistance and type 2 diabetes mellitus (T2DM). Hence, understanding the mechanisms underlying proper metabolic flexibility is key to prevent the development of metabolic disease and physiological deterioration. An important downstream player in the effects of metabolic flexibility is the mitochondrion. The objective of this review was to describe how mitochondrial metabolism adapts to limited nutrient situations or caloric excess by changes in mitochondrial function or biogenesis, as well as to define the mechanisms propelling these changes. Altogether, this should pinpoint key regulatory points by which metabolic flexibility might be ameliorated in situations of metabolic disease.
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TL;DR
This review argues that metabolic flexibility—the ability to switch fuel oxidation to match fuel availability—depends on mitochondrial adaptation, and that metabolic disease reflects an impaired ability to adapt mitochondrial activity and biogenesis rather than simply reduced mitochondrial content. It integrates evidence on acute (dynamics, post-translational) and transcriptional (AMPK/SIRT1/PGC-1α, PPARs, SIRT3) control of mitochondrial metabolism under nutrient scarcity and caloric excess.
Key findings
- Metabolic inflexibility is observable already in pre-diabetic insulin-resistant individuals, and mitochondrial number, structure, and function vary between insulin-resistant and insulin-sensitive subjects, suggesting mitochondrial dysfunction may contribute to insulin resistance.
- Evidence for a causal role is conflicting: some mouse models overexpressing mitochondrial biogenesis proteins are insulin resistant, some models of mitochondrial dysfunction show increased insulin-stimulated glucose sensitivity, and T2DM patients have ~30% lower mitochondrial content yet higher mitochondrial oxidation rates and no intrinsic defect in increasing whole-body fat oxidation during exercise.
- Nutrient scarcity promotes mitochondrial elongation via cAMP/PKA phosphorylation of Drp1 (blocking fission), while lipid overload induces fission and uncoupling; fasting also induces SIRT3, which deacetylates targets including NDUFA9, SOD2, LCAD, and OPA1.
- Transcriptional control runs through AMPK (activated by rising AMP/ATP) phosphorylating PGC-1α and FOXO, priming them for SIRT1 deacetylation; caloric excess reduces SIRT1 and NAD+, raises GCN5 and NCoR1, and hyperacetylates/inactivates PGC-1α. One week of HFD raised SIRT3 and prevented hyperacetylation, but prolonged HFD decreased SIRT3 and produced hyperacetylation and mitochondrial dysfunction.
Methods
- Narrative review integrating published literature on mitochondrial response to nutrient availability, structured around three questions: evidence for mitochondrial dysfunction in acquired metabolic disorders, how energy stress affects mitochondrial function (biogenesis, dynamics, mitophagy), and whether mitochondrial function is a realistic intervention target.
- Covers acute mechanisms (fusion/fission proteins Mfn1, Mfn2, Opa1, Drp1, Mff, Fis1; acetylation/succinylation/malonylation) and transcriptional mechanisms (PPARs, PGC-1α, SIRT1, SIRT3, AMPK, FOXO, NCoR1), under both nutrient scarcity (fasting, caloric restriction) and caloric excess (high-fat feeding, obesity).
- No primary data, systematic search strategy, or meta-analysis is reported.
Limitations
- Stated: the causal link between mitochondrial function and metabolic disorders remains a challenge; it is unclear why mitochondrial content declines after prolonged fat overfeeding and how this can be prevented; whether insulin-sensitizing strategies can succeed without proper mitochondrial fitness is unresolved; the mechanism by which fission enhances uncoupling requires further study; the threshold and reason for long-term loss of protection are unsolved.
- Evident from the text: as a narrative review it relies on cited studies of varying designs and species (mouse models, cell lines, human biopsies) without systematic quality appraisal; several proposed mechanisms (e.g., SIRT3 regulation, dexamethasone/Drp1 effects in other tissues, physiological role of succinylation and malonylation) are explicitly described as not yet understood or largely unexplored.
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- Premisecitation
Mitochondrial dysfunction is at the center of many metabolic disorders, such as obesity and type 2 diabetes mellitus.
“Mitochondrial dysfunction is at the center of many metabolic disorders, such as obesity and type 2 diabetes mellitus (T2DM) (Andreux et al, 2013).”
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- Premisecitation
Diverse mitochondrial parameters, such as mitochondrial number, structure, and function, vary between insulin-resistant and insulin-sensitive subjects.
“Diverse mitochondrial parameters vary between insulin-resistant and insulin-sensitive subjects, such as mitochondrial number, structure, and function.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Galgani et al, 2008 source
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- Premisecitation
Metabolic inflexibility can already be observed in pre-diabetic individuals suffering from insulin resistance.
“Interestingly, metabolic inflexibility can already be observed in pre-diabetic individuals suffering from insulin resistance (Corpeleijn et al, 2009), limiting the ability to switch from fatty acid breakdown to fat storage after a meal and vice versa (Kelley, 2005).”
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- Premisecitation
Metabolically inflexible individuals fail to adapt their fuel preference to changes in carbohydrate or lipid supplies.
“In turn, metabolically inflexible individuals fail to adapt their fuel preference to changes in carbohydrate or lipid supplies (Galgani et al, 2008).”
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- Premisecitation
Metabolic inflexibility is a hallmark of insulin resistance and type 2 diabetes mellitus.
“Metabolic inflexibility is defined as an impaired capacity to switch between different energy substrates and is a hallmark of insulin resistance and type 2 diabetes mellitus (T2DM).”
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- Premisecitation
Novel mitochondrial post-translational modifications, including succinylation and malonylation, may reflect the metabolic state.
“In addition to acetylation, novel mitochondrial post-translational modifications have emerged that may reflect the metabolic state, including succinylation and malonylation (Du et al, 2011; Peng et al, 2011).”
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- cites Peng et al, 2011 source
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- Interpretationreasoning
Mitochondrial architectural changes might offer a new molecular mechanism to connect nutrient availability to bioenergetic adaptations.
“Thus, mitochondrial architectural changes might offer a new molecular mechanism to connect nutrient availability to bioenergetic adaptations (Liesa & Shirihai, 2013).”
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- Interpretationnone given
Cellular oxidative capacity can be controlled through increasing mitochondrial content.
“Cellular oxidative capacity can also be controlled through increasing its mitochondrial content.”
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Muscles from type 2 diabetes mellitus patients display downregulation of lipid oxidation and mitochondrial metabolism genes.
“Gene-clustering approaches supported the above hypothesis by demonstrating that muscles from T2DM patients display downregulation of lipid oxidation and mitochondrial metabolism genes (Mootha et al, 2003; Patti et al, 2003).”
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Mitochondrial deficiencies limit the capacity of oxidative tissues to adapt fat oxidation to fat availability, leading to lipid accumulation in non-adipose tissues such as skeletal muscle.
“Mitochondrial deficiencies limit the capacity of oxidative tissues to adapt fat oxidation to fat availability, leading to the accumulation of lipids in non-adipose tissues, such as skeletal muscle.”
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Lipid accumulation in non-adipose tissues is highly associated with insulin resistance.
“but lipid accumulation in non-adipose tissues is also highly associated with insulin resistance (Canto & Auwerx, 2009; Corpeleijn et al, 2009; Schooneman et al, 2013).”
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Protein acetylation has emerged as a reversible mechanism linking the metabolic state and mitochondrial function.
“Among different post-translational modifications, protein acetylation has recently emerged as another reversible mechanisms linking the metabolic state and mitochondrial function (Figs 2A and 3A).”
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Transitions between fragmented and fused states allow mitochondria to reorganize and dispose damaged elements through mitophagy.
“In addition, the transitions between fragmented and fused states allow mitochondria to reorganize and dispose damaged elements through mitophagy (Fig 1).”
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Some mouse models that overexpress proteins promoting mitochondrial biogenesis display largely enhanced mitochondrial content in skeletal muscle but are insulin resistant.
“For instance, some of the mouse models that overexpress proteins promoting mitochondrial biogenesis display a largely enhanced mitochondrial content in skeletal muscle, but are insulin resistant (Finck et al, 2005; Choi et al, 2008).”
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Insulin-stimulated glucose sensitivity is increased in some mouse models of mitochondrial dysfunction.
“Along the same line, insulin-stimulated glucose sensitivity is increased in some mouse models of mitochondrial dysfunction (Wredenberg et al, 2006; Pospisilik et al, 2007; Zechner et al, 2010).”
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Mitochondrial deficiencies are characteristic in age-related insulin resistance.
“Mitochondrial deficiencies were also characteristic in age-related insulin resistance (Petersen et al, 2003).”
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- Premisecitation
PPARα activates fatty acid oxidation by inducing lipid oxidation genes in mitochondria and peroxisomes.
“For example, PPARα activates fatty acid oxidation by inducing lipid oxidation genes in mitochondria and peroxisomes (Yoon, 2009).”
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- Premisecitation
Several pharmacological and nutritional interventions protect against the development of insulin resistance and high-fat diet-induced metabolic damage.
“Several pharmacological and nutritional interventions have been designed in this direction, which protect against the development of insulin resistance and high-fat diet (HFD)-induced metabolic damage (e.g., resveratrol or PPARβ agonists) (Andreux et al, 2013).”
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- Premisecitation
Mitochondrial biogenesis is achieved through orchestrated induction of several transcriptional regulators whose activity is critically determined by energetic demands.
“Mitochondrial biogenesis is achieved through orchestrated induction of several transcriptional regulators, whose activity is critically determined by energetic demands (Andreux et al, 2013) (Figs 2B, 3B and C).”
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- Premisecitation
Insulin resistance in the skeletal muscle of insulin-resistant offspring of type 2 diabetes mellitus patients is associated with dysregulation of intramyocellular fatty acid metabolism, possibly due to deficiencies in mitochondrial oxidative phosphorylation capacity.
“In a parallel study, insulin resistance in the skeletal muscle of insulin-resistant offspring of T2DM patients was associated with dysregulation of intramyocellular fatty acid metabolism, possibly due to deficiencies in mitochondrial oxidative phosphorylation capacity (Petersen et al, 2004).”
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- Premisecitation
Changes in mitochondrial protein acetylation are due to changes in the balances between acetylation and deacetylation rates, involving the mitochondrial NAD+-dependent deacetylase SIRT3.
“This is due to changes in the balances between acetylation and deacetylation rates, for instance involving the mitochondrial NAD+-dependent deacetylase SIRT3 (Houtkooper et al, 2012).”
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- Interpretationcitation
In obese individuals, impaired mitochondrial function might contribute to lower intramyocellular lipid turnover and lead to lipotoxicity.
“In obese individuals, impaired mitochondrial function might contribute to lower IMCL turnover and lead to lipotoxicity (Schooneman et al, 2013).”
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- Premisecitation
Changes in mitochondrial architecture can affect respiratory complex assembly and the proper coupling of respiration to ATP synthesis.
“Indeed, as described below, changes in mitochondrial architecture can affect respiratory complex assembly and the proper coupling of respiration to ATP synthesis (Gomes et al, 2011).”
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- Interpretationreasoning
Increasing mitochondrial content could constitute a promising preventive and therapeutic approach against insulin resistance and type 2 diabetes mellitus.
“In light of the above data, increasing mitochondrial content could constitute a promising preventive and therapeutic approach against insulin resistance and T2DM (Canto & Auwerx, 2009).”
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- Premisecitation
Dysfunctional mitochondria, especially those with dissipated membrane potential, are recognized by the mitophagic machinery and broken down rapidly.
“Dysfunctional mitochondria, especially those with dissipated membrane potential, are recognized by the mitophagic machinery and broken down rapidly (Youle & Narendra, 2011).”
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- Interpretationcitation
Mitochondrial dysfunction might contribute to metabolic inflexibility and insulin resistance.
“This suggests that mitochondrial dysfunction might contribute to metabolic inflexibility and insulin resistance (Galgani et al, 2008).”
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- Premisereasoning
Upon fasting and high-fat feeding, the acetylation pattern of mitochondrial proteins strongly changes.
“Upon fasting and high-fat feeding, the acetylation pattern of mitochondrial proteins strongly changes.”
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In diverse human cell lines, COX activity was found to be higher than that required to support endogenous respiration rates, allowing adaptability to higher respiratory needs.
“It was initially characterized in diverse human cell lines, where COX activity was found to be higher than that required to support endogenous respiration rates, allowing this way some adaptability to higher respiratory needs (Villani et al, 1998).”
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- Premisecitation
Reversibly acetylated mitochondrial proteins can be found in most mitochondrial functions, including oxidative phosphorylation, reactive oxygen species metabolism, and fatty acid metabolism.
“Reversibly acetylated mitochondrial proteins can be found in most mitochondrial functions, including oxidative phosphorylation (Ahn et al, 2008), reactive oxygen species metabolism (Qiu et al, 2010; Chen et al, 2011) and fatty acid metabolism (Hirschey et al, 2010).”
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The link between intramyocellular lipid and insulin resistance was confirmed in biopsies from individuals with obesity and type 2 diabetes mellitus.
“The link between IMCL and insulin resistance was confirmed in biopsies from individuals with obesity and T2DM (Goodpaster et al, 2000; Coen & Goodpaster, 2012).”
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PGC-1α is a target of AMPK.
“One of these targets is PGC-1α (Jager et al, 2007).”
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- Interpretationcitation
Fluctuations in NAD+ levels during nutrient restriction might contribute to the control of SIRT3 activity.
“This indicates that fluctuations in NAD+ levels during nutrient restriction might contribute in the control of SIRT3 activity.”
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The SIRT3 deacetylase enzyme has emerged as a key regulator of mitochondrial activity.
“The SIRT3 deacetylase enzyme has also emerged as a key regulator of mitochondrial activity (Lombard et al, 2007).”
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- Premisenone given
AMP-activated protein kinase is activated by increases in the AMP/ATP ratio.
“A primordial sensor for energy stress is the AMP-activated protein kinase (AMPK), an enzyme that is activated by increases in the AMP/ATP ratio (Fig 2B).”
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Caloric restriction is the most consistent physiological intervention to improve health and extend lifespan across a wide range of organisms.
“Additional interest on how nutrient scarcity modulates mitochondrial function comes from the fact that CR is the most consistent physiological intervention to improve health and extend lifespan across a wide range of organisms (Fontana et al, 2010; Houtkooper et al, 2010b).”
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Under nutrient scarcity, mitochondrial fusion is typically observed.
“Under these circumstances, mitochondrial fusion is typically observed (Liesa & Shirihai, 2013) (Fig 2A).”
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- Premisecitation
PGC-1α coactivates a set of transcription factors involved in mitochondrial metabolism, including estrogen-related receptors, nuclear respiratory factors, and PPARs.
“As a consequence, PGC-1α coactivates a set of transcription factors involved in mitochondrial metabolism, including estrogen-related receptors, nuclear respiratory factors, and PPARs (Andreux et al, 2013).”
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Some studies found no increase in mitochondrial protein content upon caloric restriction.
“These findings were rapidly accepted and have led to the concept that CR induces mitochondrial biogenesis, even though some studies found no increase in mitochondrial protein content upon CR (Hancock et al, 2008).”
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- Premisecitation
The global increase in protein acetylation does not reflect how specific residues are deacetylated upon caloric restriction.
“Indeed, the global increase in protein acetylation does not reflect how specific residues are deacetylated upon CR (Hebert et al, 2013).”
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- Premisecitation
SIRT3 deacetylates and elevates the GTPase activity of the inner membrane fusion protein OPA1, thereby favoring mitochondrial elongation.
“Interestingly, SIRT3 also deacetylates and elevates the GTPase activity of the inner membrane fusion protein OPA1, thereby favoring mitochondrial elongation (Samant et al, 2014).”
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- Premisecitation
Changes in mitochondrial cristae content could contribute to an optimal assembly of respiratory supercomplexes, promoting a more efficient electron flux through the respiratory chain.
“These changes in mitochondrial cristae content could also contribute to an optimal assembly of so-called respiratory supercomplexes, promoting a more efficient electron flux through the respiratory chain (Cogliati et al, 2013).”
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- Premisecitation
Deacetylated FOXO contributes to the regulation of mitochondrial function and lipid metabolism.
“The deacetylated FOXO will then contribute to the regulation of mitochondrial function and lipid metabolism (Canto & Auwerx, 2009).”
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- Interpretationnone given
Prolonged nutrient stress requires adaptation through transcriptional responses.
“Prolonged nutrient stress requires adaptation through transcriptional responses.”
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Increasing NAD+ content leads to higher SIRT1 activity.
“Hence, increasing NAD+ content leads to higher SIRT1 activity (Canto & Auwerx, 2012).”
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- Premisecitation
Caloric restriction enhances mitochondrial protein acetylation in diverse tissues, such as liver, heart, and kidney.
“Intriguingly, CR enhances mitochondrial protein acetylation in diverse tissues, such as liver, heart, and kidney (Schwer et al, 2009).”
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The activity of PGC-1α is regulated by post-translational modifications that fine-tune mitochondrial metabolism with environmental challenges.
“The activity of PGC-1α is regulated by post-translational modifications that fine-tune mitochondrial metabolism with environmental challenges (Canto & Auwerx, 2009).”
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- Premisecitation
Upon phosphorylation, PGC-1α is recognized as a deacetylation target by SIRT1.
“Upon phosphorylation, PGC-1α is recognized as a deacetylation target by SIRT1 (Canto & Auwerx, 2009; Iwabu et al, 2010).”
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FOXOs can act as critical regulators of mitochondrial homeostasis by regulating the expression of Mul1 and PINK1.
“Interestingly, FOXOs can also act as critical regulators of mitochondrial homeostasis through, at least, two additional means: (i) by regulating the expression of Mul1, a mitochondrial E3 ubiquitin ligase that controls Mfn2 degradation rates (Lokireddy et al, 2012), and (ii) by regulating the expression of the PTEN-induced kinase 1 (PINK1), a key component of the mitophagy machinery (Mei et al, 2”
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PGC-1α regulates mitochondrial biogenesis by coactivating various transcription factors and nuclear receptors.
“The PPARγ coactivator 1α, PGC-1α, regulates mitochondrial biogenesis by coactivating various transcription factors and nuclear receptors.”
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The activation of cAMP/PKA upon nutrient starvation leads to phosphorylation of Drp1, preventing its stable docking on the mitochondrial surface and therefore mitochondrial fission.
“The activation of cAMP/PKA upon nutrient starvation leads to phosphorylation of Drp1, preventing its stable docking on the mitochondrial surface and therefore mitochondrial fission (Cereghetti et al, 2008) (Fig 2A).”
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- Premisecitation
SIRT1 also deacetylates forkhead box O transcription factors, enhancing the expression of lipid oxidation and oxidative stress protection genes.
“In addition to PGC-1α, SIRT1 also deacetylates forkhead box O (FOXO) transcription factors, enhancing the expression of lipid oxidation and oxidative stress protection genes (Brunet et al, 2004).”
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- Premisecitation
Lipid overloading promotes fast and transient changes in mitochondrial architecture.
“Lipid overloading promotes fast and transient changes in mitochondrial architecture.”
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Prolonged lipid overload compromises mitochondrial function.
“However, prolonged lipid overload compromises mitochondrial function.”
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PGC-1α and NCoR1 oppositely regulate several transcription factors, including nuclear respiratory factors, estrogen-related receptors and PPARs.
“In fact, PGC-1α and NCoR1 oppositely regulate several transcription factors, including nuclear respiratory factors, estrogen-related receptors and PPARs (Scarpulla, 2011; Andreux et al, 2013; Mottis et al, 2013).”
Quote in the paperNot a substantial claim0 of 3 sources checked - Interpretationreasoning
Decreased PGC-1α activity explains the defects in Mfn2 observed in obese and T2DM individuals.
“Similar to many mitochondrial genes, Mfn2 expression is controlled by PGC-1α (Soriano et al, 2006), suggesting that decreased PGC-1α activity explains the defects in Mfn2 observed in obese and T2DM individuals.”
Quote in the paperSubstantial claim - Premisecitation
Dietary excess of lipids dramatically changes mitochondrial protein acetylation.
“Dietary excess of lipids also dramatically changes mitochondrial protein acetylation.”
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- Premisecitation
Mfn2 expression is controlled by PGC-1α.
“Similar to many mitochondrial genes, Mfn2 expression is controlled by PGC-1α (Soriano et al, 2006), suggesting that decreased PGC-1α activity explains the defects in Mfn2 observed in obese and T2DM individuals.”
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- Premisecitation
Mitochondrial fission events promoted mitochondrial uncoupled respiration.
“These mitochondrial fission events promoted mitochondrial uncoupled respiration (Liesa & Shirihai, 2013; Wikstrom et al, 2014).”
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- cites Wikstrom et al, 2014
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Changes in mitochondrial dynamics are apparent in the acute phase of caloric excess.
“Changes in mitochondrial dynamics are apparent in the acute phase of caloric excess.”
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In the initial phases of HFD (up to 1 month), mitochondrial and lipid oxidation genes are upregulated to meet the higher flux of lipid substrates.
“In the initial phases of HFD (up to 1 month), mitochondrial and lipid oxidation genes are upregulated to meet the higher flux of lipid substrates (Garcia-Roves et al, 2007; Hancock et al, 2008).”
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- cites Hancock et al, 2008 source
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- Premisecitation
HFD reduces NAD+ content in diverse tissues.
“HFD also reduces the NAD+ content in diverse tissues, which is likely to impair SIRT1 activation (Kim et al, 2011; Yoshino et al, 2011) (Fig 3B).”
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Lipid overload enhances norepinephrine-induced mitochondrial fission in brown adipocytes in vivo and ex vivo.
“Additional recent efforts have elegantly demonstrated that lipid overload also enhances norepinephrine-induced mitochondrial fission in brown adipocytes in vivo and ex vivo (Wikstrom et al, 2014).”
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- Interpretationcitation
Mitochondrial uncoupling upon lipid loading may be a way to dissipate energy and prevent detrimental lipid deposition in the cell.
“Irrespective of the mechanism, mitochondrial uncoupling upon lipid loading may be a way to dissipate energy and prevent detrimental lipid deposition in the cell (Liesa & Shirihai, 2013).”
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- Premisenone given
Mitochondrial biogenesis can occur simultaneously to insulin resistance.
“mitochondrial biogenesis can occur simultaneously to insulin resistance”
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HFD in mice leads to hyperacetylated, inactive PGC-1α.
“Indeed, HFD in mice leads to hyperacetylated, inactive, PGC-1α (Coste et al, 2008).”
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- Premisecitation
Defective mitochondrial dynamics and mitochondrial-ER communication in hypothalamic POMC and AgRP neurons might modify feeding behavior and whole-body energy homeostasis.
“Defective mitochondrial dynamics and mitochondrial-ER communication in hypothalamic POMC and AgRP neurons might actually modify feeding behavior and whole-body energy homeostasis (Dietrich et al, 2013; Schneeberger et al, 2013).”
Quote in the paperNot a substantial claim0 of 2 sources checked - Interpretationreasoning
Defective long-term protection likely contributes to lipid accumulation and insulin resistance.
“The threshold for this to happen and the reason behind it still need to be solved, but it seems likely that this defective long-term protection contributes to lipid accumulation and insulin resistance.”
Quote in the paperSubstantial claim - Premisenone given
Most studies show that fat oxidation is increased in obese, insulin-resistant individuals and T2DM patients.
“most studies actually show that fat oxidation is increased in obese, insulin-resistant individuals and T2DM patients.”
Quote in the paperNot a substantial claim - Interpretationreasoning
The increase in SIRT3 may represent a cellular adaptation to cope with the need to use fatty acid oxidation as the main path for energy production.
“This increase in SIRT3 may represent a cellular adaptation to cope with the need to use fatty acid oxidation as the main path for energy production.”
Quote in the paperNot a substantial claim - Interpretationcitation
Reduced NAD+ content likely impairs SIRT1 activation.
“HFD also reduces the NAD+ content in diverse tissues, which is likely to impair SIRT1 activation (Kim et al, 2011; Yoshino et al, 2011) (Fig 3B).”
Quote in the paperSubstantial claim - Interpretationcitation
Regulation of mitochondrial dynamics is essential to meet metabolic challenges.
“Indeed, deletion of Mfn2 in the liver disrupts mitochondria-ER connectivity and thereby induces ER stress-mediated susceptibility to metabolic disease upon high-fat feeding (Sebastian et al, 2012), indicating once more that the regulation of mitochondrial dynamics is essential to meet metabolic challenges.”
Quote in the paperSubstantial claim - Premisecitation
Mitochondrial fission is induced within minutes after lipid overload in INS-1 cells.
“Along with this fusion deficiency, mitochondrial fission is induced within minutes after a lipid overload in INS-1 cells (Molina et al, 2009; Liesa & Shirihai, 2013) (Fig 3A).”
Quote in the paperSubstantial claim0 of 2 sources checked - Interpretationreasoning
Evaluation of mitochondrial content as a readout for function might lead to conflictive observations on the relationship between diverse pathologies, lipid oxidation rates, and true mitochondrial function.
“In light of the evidence reviewed here, the evaluation of mitochondrial content as a readout for function might lead to conflictive observations on the relationship between diverse pathologies, lipid oxidation rates, and true mitochondrial function.”
Quote in the paperSubstantial claim - Interpretationreasoning
Metabolic flexibility and mitochondrial fitness might not necessarily correlate with mitochondrial number or mitochondrial protein content, but to the ability to adapt mitochondrial activity and biogenesis to external stimuli.
“We propose that metabolic flexibility and mitochondrial fitness might not necessarily correlate with mitochondrial number or mitochondrial protein content, but to the ability to adapt mitochondrial activity and biogenesis to external stimuli.”
Quote in the paperSubstantial claim - Interpretationreasoning
Hyperacetylation of PGC-1α renders it unable to properly coactivate target transcription factors, leading to decreased mitochondrial biogenesis.
“The resulting hyperacetylation of PGC-1α renders it unable to properly coactivate target transcription factors, leading to decreased mitochondrial biogenesis.”
Quote in the paperSubstantial claim - Premisecitation
Obese patients display a largely fragmented mitochondrial network in skeletal muscle.
“In line with the above observations, obese patients display a largely fragmented mitochondrial network in skeletal muscle (Bach et al, 2003).”
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- May combine two claims. 33
- Classified as probably not a substantial claim. 7
May combine two claims.
InterpretationreasoningSome tissues, such as human muscle, might have a notable reserve of respiratory capacity, and minor changes in their mitochondrial content might not be enough to limit resting respiratory needs.
“This highlights how some tissues, such as human muscle, might actually have a notable reserve of respiratory capacity, and that minor changes in their mitochondrial content might not be enough to limit resting respiratory needs.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationThe decreased mitochondrial content in insulin-resistant old individuals seems to be linked to decreased physical activity and can be enhanced in response to exercise.
“Similarly, the decreased mitochondrial content in insulin-resistant old individuals seems to be rather linked to decreased physical activity and can be perfectly enhanced in response to exercise (Broskey et al, 2014).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Broskey et al, 2014
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May combine two claims.
PremisecitationPPARβ/δ triggers fatty acid β-oxidation in muscle and adipose tissue, which results in enhanced fat breakdown.
“PPARβ/δ triggers fatty acid β-oxidation in muscle and adipose tissue, which results in enhanced fat breakdown (Wang et al, 2003; Varga et al, 2011).”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites Wang et al, 2003 source
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- cites Varga et al, 2011
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PremisecitationType 2 diabetes mellitus patients, despite having a 30% lower mitochondrial content, have higher mitochondrial oxidation rates and do not have an intrinsic problem to increase their whole-body fat oxidation rate during exercise.
“Finally, T2DM patients, despite having a 30% lower mitochondrial content, have higher mitochondrial oxidation rates and do not have an intrinsic problem to increase their whole-body fat oxidation rate during exercise (Larsen et al, 2009; Holloszy, 2013).”
Quote in the paperSubstantial claim0 of 2 sources checkedMay combine two claims.
PremisecitationIntramyocellular lipid levels were increased in first-level relatives of type 2 diabetes mellitus patients and were associated with impaired insulin-stimulated glucose uptake in muscle.
“For instance, IMCL levels were increased in first-level relatives of T2DM patients and associated with impaired insulin-stimulated glucose uptake in muscle (Pan et al, 1997).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Pan et al, 1997 source
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PremisecitationPPARs are nuclear receptors that directly bind specific lipid species that generally increase upon cellular fat overflow and control different transcriptional programs linked to lipid metabolism.
“PPARs are nuclear receptors that directly bind specific lipid species that generally increase upon cellular fat overflow in the cells. There are three PPARs: α, β (also known as δ) and γ. Each of these binds specific lipid species as ligands and controls different transcriptional programs linked to lipid metabolism (Wahli & Michalik, 2012).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Wahli & Michalik, 2012
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PremisecitationLipids interfere with insulin signaling and represent one of the key aspects that could contribute to insulin resistance in situations of high-fat feeding or lipid infusion.
“These lipids interfere with insulin signaling and represent one of the key aspects that could contribute to insulin resistance in situations of high-fat feeding or lipid infusion (Pan et al, 1997; Krssak et al, 1999; Goodpaster et al, 2000).”
Quote in the paperSubstantial claim0 of 3 sources checkedMay combine two claims.
PremisecitationMitochondrial dysfunction is observed only after prolonged high-fat feeding, while insulin resistance develops earlier.
“Also, mitochondrial dysfunction is observed only after prolonged high-fat feeding, while insulin resistance develops earlier (Hancock et al, 2008).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Hancock et al, 2008 source
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PremisecitationCells under a well-fed condition maintain their mitochondria in a separated or fragmented state, while under fasting or starved conditions mitochondria tend to persist in a connected or fused state.
“Cells under a well-fed condition maintain their mitochondria in a separated (or fragmented) state, while under fasting or starved conditions, mitochondria tend to persist in a connected (or fused) state (Gomes et al, 2011).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Gomes et al, 2011 source
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Probably not a substantial claim: may not pass S4 (based). May combine two claims.
Interpretationnone givenMitochondrial activity can be controlled through at least two major mechanisms: acute mechanisms that qualitatively modify mitochondrial function and longer-term transcriptional mechanisms that increase mitochondrial number.
“Mitochondrial activity can be controlled through at least two major mechanisms: acute ones, aimed to qualitatively modify mitochondrial function, and longer-term transcriptional mechanisms, aimed to increase mitochondrial number.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationInitial evidence indicated that caloric restriction enhances mitochondrial content.
“Initial evidence indicated that CR enhances mitochondrial content (Nisoli et al, 2005).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Nisoli et al, 2005
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PremisecitationIncreased SIRT3 activity facilitates optimal fatty acid oxidation, mitochondrial electron transfer, and protection against reactive oxygen species.
“The increased SIRT3 activity facilitates optimal fatty acid oxidation, mitochondrial electron transfer and protection against reactive oxygen special all at once (He et al, 2012).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites He et al, 2012
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationA recent report indicates that caloric restriction enhances mitochondrial function without changes in mitochondrial content or biogenesis.
“Interestingly, a recent report indicates that CR enhances mitochondrial function without changes in mitochondrial content or biogenesis (Lanza et al, 2012).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Lanza et al, 2012 source
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PremisecitationDexamethasone induces Drp1 expression in liver cells and thereby changes mitochondrial morphology and metabolism that favor gluconeogenic procedures.
“For example, dexamethasone induces Drp1 expression in liver cells and thereby changes mitochondrial morphology and metabolism that favor gluconeogenic procedures (Hernandez-Alvarez et al, 2013).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Hernandez-Alvarez et al, 2013
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PremisecitationDifferent situations of energy restriction, including fasting and exercise, increase NAD+ levels and trigger SIRT1/PGC-1α-dependent mitochondrial adaptation.
“Indeed, different situations of energy restriction, including fasting and exercise, increase NAD+ levels and trigger SIRT1/PGC-1α-dependent mitochondrial adaptation (Lin et al, 2000; Houtkooper et al, 2012).”
Quote in the paperSubstantial claim0 of 2 sources checkedMay combine two claims.
PremisecitationExogenously providing NAD+ precursors can enhance SIRT3 activity in mammalian cells and tissues and rescue deficient SIRT3 activity in a model for complex I deficiency.
“Indeed, exogenously providing NAD+ precursors can enhance SIRT3 activity in mammalian cells and tissues (Canto et al, 2012) and rescue deficient SIRT3 activity in a model for complex I deficiency (Karamanlidis et al, 2013).”
Quote in the paperSubstantial claim0 of 2 sources checked- cites Canto et al, 2012
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- cites Karamanlidis et al, 2013
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PremisecitationElongated mitochondria upon fasting possess more cristae and increased levels of dimerization and activity of ATP synthase, ensuring a better coupling of fuel oxidation with ATP synthesis.
“Elongated mitochondria upon fasting possess more cristae and increased levels of dimerization and activity of ATP synthase, ensuring a better coupling of fuel oxidation with ATP synthesis (Gomes et al, 2011).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Gomes et al, 2011 source
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Premisenone givenIn the basal state, PGC-1α is acetylated, which dampens PGC-1α activity.
“In the basal state, PGC-1α is acetylated, which dampens PGC-1α activity.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
InterpretationcitationThe two-step activation of PGC-1α might be a conserved mechanism for AMPK to confer specificity among the various targets of SIRT1.
“This two-step activation of PGC-1α might be a conserved mechanism for AMPK to confer specificity among the various targets of SIRT1 (Canto & Auwerx, 2010).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Canto & Auwerx, 2010 source
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PremisecitationUpon fasting, SIRT3 expression is rapidly induced and deacetylates key residues on mitochondrial proteins.
“Upon fasting, SIRT3 expression is rapidly induced and deacetylates key residues on mitochondrial proteins (Hirschey et al, 2010).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Hirschey et al, 2010 source
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InterpretationreasoningSIRT3 regulates more accessible hydrophilic residues, while residues on hydrophobic regions are less accessible and prone to become acetylated.
“This suggests that SIRT3 regulates more accessible hydrophilic residues, while residues on hydrophobic regions are less accessible and prone to become acetylated.”
Quote in the paperNot a substantial claimMay combine two claims.
Premisenone givenNutrient scarcity in organisms is linked to an increase in circulating glucagon and other stress hormones, such as norepinephrine, which generally increase intracellular cAMP levels and PKA signaling.
“Nutrient scarcity in organisms is linked to an increase in circulating glucagon and other stress hormones, such as norepinephrine, which generally increase intracellular cAMP levels and PKA signaling (Fig 2A).”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationPPARγ controls lipogenic and adipocyte differentiation gene expression and activates lipid storage.
“In contrast, PPARγ controls lipogenic and adipocyte differentiation gene expression and activates lipid storage (Varga et al, 2011; Wahli & Michalik, 2012).”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites Varga et al, 2011
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- cites Wahli & Michalik, 2012
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PremisecitationFOXO transcription factors are effectors of AMPK and are also targets for deacetylation by SIRT1.
“Other effectors of AMPK are the FOXO transcription factors (Greer et al, 2007), which are also a target for deacetylation by SIRT1 (Brunet et al, 2004).”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites Greer et al, 2007
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- cites Brunet et al, 2004 source
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May combine two claims.
PremisecitationUpon nutrient stress, the NAD+-dependent deacetylase SIRT1 activates PGC-1α, a reaction that is rate-limited by availability of the metabolite NAD+.
“Upon nutrient stress, the NAD+-dependent deacetylase SIRT1 activates PGC-1α, a reaction that is rate-limited by availability of the metabolite NAD+ (Houtkooper et al, 2010a).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Houtkooper et al, 2010a
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Premisenone givenUpon activation, AMPK activates catabolic pathways and switches off energy-consuming processes.
“Upon activation, AMPK activates catabolic pathways and switches off energy-consuming processes.”
Quote in the paperSubstantial claimClassified as probably not a substantial claim.
Premisenone givenMitochondrial function can dramatically change through fusion/fission or post-translational modifications of mitochondrial proteins.
“While most studies observe mitochondria in a steady state, mitochondrial function can dramatically change through fusion/fission or post-translational modifications of mitochondrial proteins.”
Quote in the paperSubstantial claimMay combine two claims.
Premisenone givenReductions in the content of mitochondrial enzymes and alterations in mitochondrial shape were observed in muscles from patients with T2DM.
“However, most of the data supporting this concept are based on the fact that reductions in the content of mitochondrial enzymes and alterations in mitochondrial shape were observed in the muscles from patients with T2DM.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S4 (based).
Premisenone givenDisruption of mitochondrial function leads to increases in basal and insulin-stimulated glucose uptake in some models.
“disruption of mitochondrial function leads to increases in basal and insulin-stimulated glucose uptake in some models”
Quote in the paperNot a substantial claimMay combine two claims.
InterpretationreasoningHigher mitochondrial content could also be due to deficiencies in mitochondrial recycling mechanisms and in fact be linked to mitochondrial dysfunction.
“Indeed, higher mitochondrial content could also be due to deficiencies in mitochondrial recycling mechanisms and in fact be linked to mitochondrial dysfunction.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationDuring HFD, SIRT1 expression is reduced, while GCN5 acetyltransferase, which acetylates PGC-1α, is expressed at higher levels.
“During HFD, SIRT1 expression is reduced, while the GCN5 acetyltransferase, which acetylates PGC-1α, is expressed at higher levels (Coste et al, 2008).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Coste et al, 2008
Not checked in the free run.
Probably not a substantial claim: may not pass S4 (based).
Premisenone givenAccumulation of lipids could impair insulin signaling.
“This went hand in hand with the accumulation of lipids that could impair insulin signaling.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationProlonged HFD dramatically decreases SIRT3 expression, correlating with the appearance of mitochondrial hyperacetylation and mitochondrial dysfunction.
“Conversely, prolonged HFD dramatically decreases SIRT3 expression, correlating with the appearance of mitochondrial hyperacetylation and mitochondrial dysfunction (Hirschey et al, 2010).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Hirschey et al, 2010 source
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PremisecitationOne week of HFD enhanced SIRT3 levels and prevented mitochondrial hyperacetylation despite higher levels of lipid substrates.
“One week of HFD enhanced SIRT3 levels and prevented mitochondrial hyperacetylation despite the higher levels of lipid substrates (Hirschey et al, 2010).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Hirschey et al, 2010 source
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PremisecitationDeletion of Mfn2 in the liver disrupts mitochondria-ER connectivity and thereby induces ER stress-mediated susceptibility to metabolic disease upon high-fat feeding.
“Indeed, deletion of Mfn2 in the liver disrupts mitochondria-ER connectivity and thereby induces ER stress-mediated susceptibility to metabolic disease upon high-fat feeding (Sebastian et al, 2012), indicating once more that the regulation of mitochondrial dynamics is essential to meet metabolic challenges.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Sebastian et al, 2012 source
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May combine two claims.
PremisecitationMuscle-specific AMPK knockouts display enlarged but dysfunctional mitochondria.
“This is the case, for example, in muscle-specific AMPK knockouts, which display enlarged but dysfunctional mitochondria (O'Neill et al, 2011).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites O'Neill et al, 2011
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PremisecitationExpression of repressive transcriptional regulators, such as NCoR1, is enhanced by HFD, repressing genes that control mitochondrial activity and contributing to excessive calorie storage.
“The expression of repressive transcriptional regulators, such as the nuclear receptor corepressor 1 (NCoR1), is also enhanced by HFD, repressing genes that control mitochondrial activity and contributing to the excessive calorie storage (Yamamoto et al, 2011) (Fig 3C).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Yamamoto et al, 2011
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PremisereasoningMfn2 expression is reduced, possibly through transcriptional regulation.
“Still, however, Mfn2 expression is also reduced, possibly through transcriptional regulation.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationIn Zucker rats and obese humans, Mfn2 was strongly decreased in skeletal muscle tissues compared to controls, and this was associated with a smaller mitochondrial network and size.
“Studies in Zucker rats and obese humans have shown that Mfn2 was strongly decreased in their skeletal muscle tissues compared to the control groups, which was associated with smaller mitochondrial network and size (Bach et al, 2003).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Bach et al, 2003 source
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The paper relies on this without support.
The influence of limited nutrient availability, such as fasting and caloric restriction, or excessive nutrient supply, such as high-fat feeding, on mitochondrial processes is only sparsely described.
“However, it is only sparsely described how these processes are influenced by situations of limited nutrient availability, such as fasting and caloric restriction (CR), or by excessive nutrient supply, such as high-fat feeding.”
The paper relies on this without support.
Compliance with regular exercise and restricted food intake is poor, and the metabolic syndrome epidemic is still spreading.
“However, compliance is poor and the metabolic syndrome epidemic is still spreading.”
The paper relies on this without support.
The relationship between caloric restriction and mitochondrial regulation is still under debate.
“The relationship between CR and mitochondrial regulation is, however, still under debate.”
The paper relies on this without support.
The mechanisms underlying the enhanced mitochondrial function induced by caloric restriction are not clear.
“The mechanisms underlying this enhanced function are, however, not clear.”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Deregulation of mitochondrial function underlies the onset of metabolic inflexibility.
“Many studies support the idea that deregulation of mitochondrial function underlies the onset of metabolic inflexibility [reviewed in Muoio (4)], although a causal link between the two still remains to be fully established (100, 101).”
From Metabolic Flexibility as an Adaptation to Energy Resources and Requirements in Health and Disease (2018) · cites this paper as [100]
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Percentages, sums and reported differences re-computed from the paper’s own numbers.
Each contradiction between two passages listed here was confirmed by an independent check.
Drp1 oligomerization is described as required for fusion
MinorThe text says fusion during energy stress requires mitochondrial oligomerization of Drp1, but immediately says preventing Drp1 from docking on mitochondria prevents fission and favors fusion.
“Mitochondrial fusion upon energy stress requires the mitochondrial oligomerization of Drp1, which actively shuttles between mitochondria and the cytosol.”
“The activation of cAMP/PKA upon nutrient starvation leads to phosphorylation of Drp1, preventing its stable docking on the mitochondrial surface and therefore mitochondrial fission (Cereghetti et al, 2008) (Fig 2A).”
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SIRT3 regulates mitochondrial fatty-acid oxidation by reversible enzyme deacetylation
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Calorie restriction reduces oxidative stress by SIRT3-mediated SOD2 activation
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“Studies in Zucker rats and obese humans have shown that Mfn2 was strongly decreased in their skeletal muscle tissues compared to the control groups, which was associated with smaller mitochondrial network and size (Bach et al , 2003).”
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InfluentialIntramuscular lipid content is increased in obesity and decreased by weight loss
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Self-citationMitochondrial Networking Protects β-Cells From Nutrient-Induced Apoptosis
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Self-citationCalorie restriction alters mitochondrial protein acetylation
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Self-citationRespiratory chain dysfunction in skeletal muscle does not cause insulin resistance
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Metabolic Flexibility as an Adaptation to Energy Resources and Requirements in Health and Disease
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- Authors
- Gao, A. W., Cantó, C., & Houtkooper, R. H.
- Affiliations
- Amsterdam UMC Location University of Amsterdam (NL)
- Nestlé (Switzerland) (CH)
- Corresponding author
- Houtkooper, Riekelt H
- Venue
- EMBO Molecular Medicine
- Published
- 2014-03-12
- Volume
- 6
- Issue
- 5
- Pages
- 580-589
- ISSN
- 1757-4676 (ISSN-L)
- 1757-4684
- PMC
- PMC4023882
- OpenAlex
- W2155904682
- Semantic Scholar
- 0d0ed25b1ed5d47aa2cec8e11df373e823c0fae4
- Cited by
- 148
- References
- 85
- Citations by year
- 2026: 5 · 2025: 11 · 2024: 11 · 2023: 8 · 2022: 10 · 2021: 12 · 2020: 18 · 2019: 10 · 2018: 15 · 2017: 14 · 2016: 19 · 2015: 13 · 2014: 2
- FWCI
- 1.48
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Locations
- EMBO Molecular Medicine (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Data Archiving and Networked Services (DANS) (submittedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion)
- Pure Amsterdam UMC (submittedVersion)
- Funders
- ZonMw‐VENI (91613050)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Mitochondrial Function and Pathology
- Health Sciences › Medicine › Physiology › Adipose Tissue and Metabolism
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Metabolism, Diabetes, and Cancer
- Keywords
- mitochondrial metabolism, metabolic flexibility, nutrient availability, mitochondrial biogenesis, insulin resistance, type 2 diabetes, caloric excess, metabolic disorders
- MeSH terms
- Adaptation, Physiological, Food, Humans, Metabolic Diseases, Mitochondria
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Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
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