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Pathogen Recognition and Innate Immunity
Open accessAbstract
Microorganisms that invade a vertebrate host are initially recognized by the innate immune system through germline-encoded pattern-recognition receptors (PRRs). Several classes of PRRs, including Toll-like receptors and cytoplasmic receptors, recognize distinct microbial components and directly activate immune cells. Exposure of immune cells to the ligands of these receptors activates intracellular signaling cascades that rapidly induce the expression of a variety of overlapping and unique genes involved in the inflammatory and immune responses. New insights into innate immunity are changing the way we think about pathogenesis and the treatment of infectious diseases, allergy, and autoimmunity.
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Cites
Janeway, C. A., & Medzhitov, R. (2002) · Annual Review of Immunology · doi:10.1146/annurev.immunol.20.083001.084359 · Cited by 8,394
Akira, S., & Takeda, K. (2004) · Nature reviews. Immunology · doi:10.1038/nri1391 · Cited by 8,312
Self-citationA Toll-like receptor recognizes bacterial DNA
Hemmi, H., Takeuchi, O., Kawai, T., Kaisho, T., Sato, S., Sanjo, H., Matsumoto, M., Hoshino, K., Wagner, H., Takeda, K., et al. (2000) · Nature · doi:10.1038/35047123 · Cited by 6,491 · cited 1×
“Bacterial DNA Bacterial genomic DNA is also an immunostimulant and is recognized by TLR9 (Hemmi et al., 2000; Krieg, 2002).”
Self-citationRecognition of double-stranded RNA and activation of NF-κB by Toll-like receptor 3
Alexopoulou, L., Holt, A. C., Medzhitov, R., & Flavell, R. A. (2001) · Nature · doi:10.1038/35099560 · Cited by 6,129
Gout-associated uric acid crystals activate the NALP3 inflammasome
Martinon, F., Pétrilli, V., Mayor, A., Tardivel, A., & Tschopp, J. (2006) · Nature · doi:10.1038/nature04516 · Cited by 5,326
Innate antiviral responses by means of TLR7-mediated recognition of single-stranded RNA
Diebold, S. S., Kaisho, T., Hemmi, H., Akira, S., & Reis e Sousa, C. (2004) · Science · doi:10.1126/science.1093616 · Cited by 3,444
Cryopyrin activates the inflammasome in response to toxins and ATP
Mariathasan, S., Weiss, D. S., Newton, K., McBride, J., O'Rourke, K., Roose-Girma, M., Lee, W. P., Weinrauch, Y., Monack, D. M., & Dixit, V. M. (2006) · Nature · doi:10.1038/nature04515 · Cited by 3,080
IPS-1, an adaptor triggering RIG-I- and Mda5-mediated type I interferon induction
Kawai, T., Takahashi, K., Sato, S., Coban, C., Kumar, H., Kato, H., Ishii, K. J., Takeuchi, O., & Akira, S. (2005) · Nature Immunology · doi:10.1038/ni1243 · Cited by 2,562
Self-citationCardif is an adaptor protein in the RIG-I antiviral pathway and is targeted by hepatitis C virus
Meylan, E., Curran, J., Hofmann, K., Moradpour, D., Binder, M., Bartenschlager, R., & Tschopp, J. (2005) · Nature · doi:10.1038/nature04193 · Cited by 2,401
The immune response of Drosophila
Hoffmann, J. A. (2003) · Nature · doi:10.1038/nature02021 · Cited by 1,553
Cited by
Items 201–269 of 269
Fernandez, P. L., Dutra, F. F., Alves, L., Figueiredo, R. T., Mourão-Sa, D., Fortes, G. B., Bergstrand, S., Lönn, D., Cevallos, R. R., Pereira, R. M. S., et al. (2010) · Journal of Biological Chemistry · doi:10.1074/jbc.m110.146076 · Cited by 95
Nanoparticle impact on innate immune cell pattern-recognition receptors and inflammasomes activation
Silva, A. L., Peres, C., Conniot, J., Matos, A. I., Moura, L., Carreira, B., Sainz, V., Scomparin, A., Satchi-Fainaro, R., Préat, V., et al. (2017) · Seminars in Immunology · doi:10.1016/j.smim.2017.09.003 · Cited by 95
Lin, T., Kwak, Y. H., Sammy, F., He, P., Thundivalappil, S., Sun, G., Chao, W., & Warren, H. S. (2010) · The Journal of Infectious Diseases · doi:10.1086/654929 · Cited by 91
Class-specific Regulation of Pro-inflammatory Genes by MyD88 Pathways and IκBζ
Kayama, H., Ramirez-Carrozzi, V. R., Yamamoto, M., Mizutani, T., Kuwata, H., Iba, H., Matsumoto, M., Honda, K., Smale, S. T., & Takeda, K. (2008) · Journal of Biological Chemistry · doi:10.1074/jbc.m709965200 · Cited by 92
An Essential Role for RIG-I in Toll-like Receptor-Stimulated Phagocytosis
Kong, L., Sun, L., Zhang, H., Liu, Q., Liu, Y., Qin, L., Shi, G., Hu, J.-H., Xu, A., Sun, Y.-P., et al. (2009) · Cell Host & Microbe · doi:10.1016/j.chom.2009.06.008 · Cited by 86
Stifano, G., Affandi, A. J., Mathes, A. L., Rice, L. M., Nakerakanti, S., Nazari, B., Lee, J., Christmann, R. B., & Lafyatis, R. (2014) · Arthritis Research & Therapy · doi:10.1186/ar4598 · Cited by 86
Suh, H.-S., Choi, S., Khattar, P., Choi, N., & Lee, S. C. (2010) · Journal of Neuroimmune Pharmacology · doi:10.1007/s11481-010-9192-0 · Cited by 86
Visceral Inflammation and Immune Activation Stress the Brain
Holzer, P., Farzi, A., Hassan, A. M., Zenz, G., Jačan, A., & Reichmann, F. (2017) · Frontiers in Immunology · doi:10.3389/fimmu.2017.01613 · Cited by 84
The unfolding web of innate immune dysregulation in alcoholic liver injury
Szabo, G., Mandrekar, P., Petrasek, J., & Catalano, D. (2011) · Alcoholism: Clinical and Experimental Research · doi:10.1111/j.1530-0277.2010.01398.x · Cited by 82
Prasad, S., Dimmock, D. P., Greenberg, B., Walia, J. S., Sadhu, C., Tavakkoli, F., & Lipshutz, G. S. (2022) · Human Gene Therapy · doi:10.1089/hum.2022.138 · Cited by 81
The Gut Microbiome as a Regulator of the Neuroimmune Landscape
Yu, L. W., Agirman, G., & Hsiao, E. Y. (2022) · Annual Review of Immunology · doi:10.1146/annurev-immunol-101320-014237 · Cited by 75
Zelkha, S. A., Freilich, R. W., & Amar, S. (2010) · Periodontology 2000 · doi:10.1111/j.1600-0757.2010.00358.x · Cited by 81
Carvalho, F. A., Aitken, J. D., Gewirtz, A. T., & Vijay-Kumar, M. (2011) · Mucosal Immunology · doi:10.1038/mi.2010.57 · Cited by 80
Immune regulatory functions of DOCK family proteins in health and disease
Nishikimi, A., Kukimoto-Niino, M., Yokoyama, S., & Fukui, Y. (2013) · Experimental Cell Research · doi:10.1016/j.yexcr.2013.07.024 · Cited by 80
Trapp, S., Derby, N. R., Singer, R., Shaw, A., Williams, V. G., Turville, S. G., Bess, J. W., Lifson, J. D., & Robbiani, M. (2009) · Journal of Virology · doi:10.1128/jvi.00023-08 · Cited by 79
Role of dendritic cells in innate and adaptive immune response in human aging
Gupta, S. (2014) · Experimental Gerontology · doi:10.1016/j.exger.2013.12.009 · Cited by 80
Acute Brain Injury Triggers MyD88-Dependent, TLR2/4-Independent Inflammatory Responses
Koedel, U., Merbt, U. M., Schmidt, C., Angele, B., Popp, B., Wagner, H., Pfister, H.-W., & Kirschning, C. J. (2007) · The American Journal of Pathology · doi:10.2353/ajpath.2007.060821 · Cited by 78
Zhang, C., He, H., Wang, L., Zhang, N., Huang, H., Xiong, Q., Yan, Y., Wu, N., Ren, H., Han, H., et al. (2017) · The Journal of Immunology · doi:10.4049/jimmunol.1700187 · Cited by 76
Finding a Toll on the Route: The Fate of Osteoclast Progenitors After Toll-Like Receptor Activation
Souza, P. P. C., & Lerner, U. H. (2019) · Frontiers in Immunology · doi:10.3389/fimmu.2019.01663 · Cited by 67
“Activation of the Myd88 pathway leads mainly to the production of pro-inflammatory cytokines, while engagement of TRIF triggers interferon production (60).”
BackgroundNew hope for Parkinson’s disease treatment: Targeting gut microbiota
Fan, H., Sheng, S., & Zhang, F. (2022) · CNS Neuroscience & Therapeutics · doi:10.1111/cns.13916 · Cited by 66
Aki, D., Minoda, Y., Yoshida, H., Watanabe, S., Yoshida, R., Takaesu, G., Chinen, T., Inaba, T., Hikida, M., Kurosaki, T., et al. (2008) · Genes to Cells · doi:10.1111/j.1365-2443.2007.01159.x · Cited by 68
Toll-like receptor agonists: a patent review (2011 - 2013)
Hussein, W. M., Liu, T.-Y., Skwarczynski, M., & Toth, I. (2014) · Expert Opinion on Therapeutic Patents · doi:10.1517/13543776.2014.880691 · Cited by 68
Mitochondrial Ubiquitin Ligase MARCH5 Promotes TLR7 Signaling by Attenuating TANK Action
Shi, H.-X., Liu, X., Wang, Q., Tang, P.-P., Liu, X.-Y., Shan, Y.-F., & Wang, C. (2011) · PLoS Pathogens · doi:10.1371/journal.ppat.1002057 · Cited by 67
Zhong, Z., Chen, W., Gao, H., Che, N., Xu, M., Yang, L., Zhang, Y., & Ye, M. (2021) · Neurochemical Research · doi:10.1007/s11064-021-03411-0 · Cited by 66
Crosstalk between the immune receptors and gut microbiota
Mu, C., Yang, Y., & Zhu, W. (2015) · Current Protein & Peptide Science · doi:10.2174/1389203716666150630134356 · Cited by 66
Regulation of mRNA stability by CCCH-type zinc-finger proteins in immune cells
Maeda, K., & Akira, S. (2017) · International Immunology · doi:10.1093/intimm/dxx015 · Cited by 64
Self-citationSong, F., Yi, Y., Li, C., Hu, Y., Wang, J., Smith, D. E., & Jiang, H. (2018) · Cell Death & Disease · doi:10.1038/s41419-018-0809-1 · Cited by 63
Role of Toll-like receptor/MYD88 signaling in neurodegenerative diseases
Xiang, W., Chao, Z.-Y., & Feng, D.-Y. (2015) · Reviews in the Neurosciences · doi:10.1515/revneuro-2014-0067 · Cited by 62
Abecia, L., Jiménez, E., Martínez-Fernandez, G., Martín-García, A. I., Ramos-Morales, E., Pinloche, E., Denman, S. E., Newbold, C. J., & Yáñez-Ruiz, D. R. (2017) · PLoS ONE · doi:10.1371/journal.pone.0182235 · Cited by 59
“TLR2 play very important roles in the host response to the cell wall components of pathogenic gram-positive bacteria, which can directly affect gut health [53] and also recognizes another component, bacterial lipopeptide, alone or cytoplasmic domain of TLR2 can form functional pairs with TLR1, TLR6 or TLR10 [54].”
BackgroundInfluentialDesign, Assembly, Production, and Transfection of Synthetic Modified mRNA
Oh, S., & Kessler, J. A. (2018) · Methods · doi:10.1016/j.ymeth.2017.10.008 · Cited by 58
Molecular Pathogenicity of Enteroviruses Causing Neurological Disease
Majer, A., McGreevy, A., & Booth, T. F. (2020) · Frontiers in Microbiology · doi:10.3389/fmicb.2020.00540 · Cited by 50
Intracellular recognition of pathogens and autophagy as an innate immune host defence
Yano, T., & Kurata, S. (2011) · Journal of Biochemistry · doi:10.1093/jb/mvr083 · Cited by 54
CCL1 released from M2b macrophages is essentially required for the maintenance of their properties
Asai, A., Nakamura, K., Kobayashi, M., Herndon, D. N., & Suzuki, F. (2012) · Journal of Leukocyte Biology · doi:10.1189/jlb.0212107 · Cited by 54
The role of the inflammasome in cellular responses to toxins and bacterial effectors
Freche, B., Reig, N., & van der Goot, F. G. (2007) · Seminars in Immunopathology · doi:10.1007/s00281-007-0085-0 · Cited by 52
Kim, E., Beon, J., Lee, S., Park, S. J., Ahn, H., Kim, M. G., Park, J. E., Kim, W., Yuk, J.-M., Kang, S.-J., et al. (2017) · Science Advances · doi:10.1126/sciadv.1602296 · Cited by 50
Michaud, J.-P., Richard, K. L., & Rivest, S. (2011) · Molecular Neurodegeneration · doi:10.1186/1750-1326-6-5 · Cited by 48
Bacterial cell wall constituents induce hepcidin expression in macrophages through MyD88 signaling
Layoun, A., & Santos, M. M. (2012) · Inflammation · doi:10.1007/s10753-012-9463-4 · Cited by 44
Toll-like receptor gene polymorphisms are associated with allergic rhinitis: a case control study
Nilsson, D., Andiappan, A. K., Halldén, C., De Yun, W., Säll, T., Tim, C. F., & Cardell, L.-O. (2012) · BMC Medical Genetics · doi:10.1186/1471-2350-13-66 · Cited by 43
Benoit, A., Vogin, G., Duhem, C., Berchem, G., & Janji, B. (2023) · Cells · doi:10.3390/cells12131787 · Cited by 39
“This activation is characterized by the expression of pattern recognition receptors (PRRs) and binding of pathogen-associated molecular patterns (PAMPs) or danger-associated molecular patterns (DAMPs) [18].”
BackgroundBarriers for retinal gene therapy: separating fact from fiction.
Kumar-Singh, R. (2008) · Vision Research · doi:10.1016/j.visres.2008.05.005 · Cited by 43
Neurons under viral attack: Victims or warriors?
Chakraborty, S., Nazmi, A., Dutta, K., & Basu, A. (2010) · Neurochemistry International · doi:10.1016/j.neuint.2010.02.016 · Cited by 42
Raju (2005) · doi:10.3389/fvets.2021.640968 · Cited by 42
Sequence Variants of Toll Like Receptor 4 and Late-Onset Alzheimer's Disease
Chen, Y.-C., Yip, P.-K., Huang, Y.-L., Sun, Y., Wen, L.-L., Chu, Y.-M., & Chen, T.-F. (2012) · PLoS ONE · doi:10.1371/journal.pone.0050771 · Cited by 38
Jing, X., Zulfiqar, F., Park, S. Y., Núñez, G., Dziarski, R., & Gupta, D. (2014) · The Journal of Immunology · doi:10.4049/jimmunol.1301548 · Cited by 37
Chou, W. K., Park, J., Carey, J. B., McIntyre, D. R., & Berghman, L. R. (2017) · Frontiers in Veterinary Science · doi:10.3389/fvets.2017.00037 · Cited by 36
Leifer, C. A., McConkey, C., Li, S., Chassaing, B., Gewirtz, A. T., & Ley, R. E. (2014) · Immunology Letters · doi:10.1016/j.imlet.2014.07.017 · Cited by 34
Mitochondrial epigenetics regulating inflammation in cancer and aging
Chatterjee, D., Das, P., & Chakrabarti, O. (2022) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2022.929708 · Cited by 33
“Inflammation and Epigenetics Innate immune responses, elicited during tissue damage or microbial infection are known to induce inflammation (Akira et al., 2006; Brennan et al., 2015).”
BackgroundImpaired lung homeostasis in neonatal mice exposed to cigarette smoke
McGrath-Morrow, S., Rangasamy, T., Cho, C., Sussan, T., Neptune, E., Wise, R., Tuder, R. M., & Biswal, S. (2008) · American Journal of Respiratory Cell and Molecular Biology · doi:10.1165/rcmb.2007-0104oc · Cited by 33
Ranéia e Silva, P. A., de Lima, D. S., Mesquita Luiz, J. P., Câmara, N. O. S., Alves-Filho, J. C. F., Pontillo, A., Bortoluci, K. R., & Faquim-Mauro, E. L. (2021) · Clinical Science · doi:10.1042/cs20201419 · Cited by 30
Vijay-Kumar, M., Vanegas, S. M., Patel, N., Aitken, J. D., Ziegler, T. R., & Ganji, V. (2011) · Nutrition & Metabolism · doi:10.1186/1743-7075-8-16 · Cited by 29
“Tolllike-receptor-4 (TLR-4) is a subclass of the TLR family involved in activation of the innate immune and inflammatory response in mammals [9-11] via ligation of lipopolysaccharide (LPS), a Gram-negative bacterial endotoxin found on the outer cell membrane of bacteria.”
The involvement of microglia in Alzheimer's disease: a new dog in the fight
Moore, Z., Taylor, J. M., & Crack, P. J. (2019) · British Journal of Pharmacology · doi:10.1111/bph.14546 · Cited by 29
Lopetuso, L. R., Jia, R., Wang, X.-M., Jia, L.-G., Petito, V., Goodman, W. A., Meddings, J. B., Cominelli, F., Reuter, B. K., & Pizarro, T. T. (2017) · Inflammatory Bowel Diseases · doi:10.1097/mib.0000000000001035 · Cited by 28
Fragale, A., Stellacci, E., Ilari, R., Remoli, A. L., Lanciotti, A., Perrotti, E., Shytaj, I., Orsatti, R., Lawrence, H. R., Lawrence, N. J., et al. (2011) · The Journal of Immunology · doi:10.4049/jimmunol.1000918 · Cited by 27
Yan, K., Zhu, W., Yu, L., Li, N., Zhang, X., Liu, P., Chen, Q., Chen, Y., & Han, D. (2013) · Molecular and Cellular Endocrinology · doi:10.1016/j.mce.2013.03.027 · Cited by 26
Modulation of blood cell gene expression by DHA supplementation in hypertriglyceridemic men
Dawson, K., Zhao, L., Adkins, Y., Vemuri, M., Rodriguez, R. L., Gregg, J. P., Kelley, D. S., & Hwang, D. H. (2012) · The Journal of Nutritional Biochemistry · doi:10.1016/j.jnutbio.2011.03.004 · Cited by 24
In Vivo Evaluation of the Biocompatibility of Biomaterial Device
Frazão, L. P., Vieira de Castro, J., & Neves, N. M. (2020) · Advances in Experimental Medicine and Biology · doi:10.1007/978-981-15-3262-7_8 · Cited by 23
Uchida, M., Oyanagi, E., Kawanishi, N., Iemitsu, M., Miyachi, M., Kremenik, M. J., Onodera, S., & Yano, H. (2014) · Immunology Letters · doi:10.1016/j.imlet.2013.12.021 · Cited by 18
Bartens, M.-C., Gibson, A. J., Etherington, G. J., Di Palma, F., Holder, A., Werling, D., & Willcocks, S. (2021) · Frontiers in Immunology · doi:10.3389/fimmu.2021.764390 · Cited by 19
Prolyl Isomerase Pin1 Protects Mice from Endotoxin Shock
Akiyama, H., Misawa, T., Ono, M., Uchida, C., & Uchida, T. (2011) · PLoS ONE · doi:10.1371/journal.pone.0014656 · Cited by 17
“Each TLR specifically recognizes structural components of pathogens and triggers the innate immune response [5].”
BackgroundProthrombin Kringle-2: a potential inflammatory pathogen in the parkinsonian dopaminergic system
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Alves de Souza, T., Fernandes-Santos, C., Araújo da Paixão de Oliveira, J., Tomé, L., Fiestas-Solórzano, V., Nunes, P., Guimaraes, G., Sánchez-Arcila, J., Paiva, I., de Souza, L., et al. (2022) · Pathogens · doi:10.3390/pathogens11040444 · Cited by 15
Wang, K., Dai, X., Zhang, C., Cao, X., Zhang, R., Zhang, Z., Huang, X., & Ren, Q. (2020) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2020.03.063 · Cited by 9
Klammer, M. G., Dzaye, O., Wallach, T., Krüger, C., Gaessler, D., Buonfiglioli, A., Derkow, K., Kettenmann, H., Brinkmann, M. M., & Lehnardt, S. (2021) · Frontiers in Immunology · doi:10.3389/fimmu.2021.715774 · Cited by 6
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IFI207, a young and fast-evolving protein, controls retroviral replication via the STING pathway
Moran, E. A., Salas-Briceno, K., Zhao, W., Enya, T., Aguilera, A. N., Acosta, I., Alonzo, F., Kiani, D., Behnsen, J., Alvarez, C., et al. (2024) · mBio · doi:10.1128/mbio.01209-24 · Cited by 4
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Rodrigues, C. R., Balachandran, Y., Aulakh, G. K., & Singh, B. (2024) · Journal of Innate Immunity · doi:10.1159/000535523 · Cited by 4
Molecular insights into nucleocapsid assembly and transport in Marburg and Ebola viruses
Takamatsu, Y., Dolnik, O., Hirabayashi, A., Okamoto, K., Kurashige, T., Shangfan, H., Oda Harumi, C., & Noda, T. (2025) · mBio · doi:10.1128/mbio.01557-25
Metadata
- Authors
- Akira, S., Uematsu, S., & Takeuchi, O.
- Venue
- Cell
- Publisher
- Elsevier BV
- Published
- 2006-02
- Volume
- 124
- Issue
- 4
- Pages
- 783-801
- ISSN
- 0092-8674 (ISSN-L)
- OpenAlex
- W1995744610
- Cited by
- 11,952
- References
- 10
- FWCI
- 201.13
- Type
- journal article
- Language
- en
- Open access
- bronze
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