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Quantifying the local resolution of cryo-EM density maps
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We propose a definition of local resolution for three-dimensional electron cryo-microscopy (cryo-EM) density maps that uses local sinusoidal features. Our algorithm has no free parameters and is applicable to other imaging modalities, including tomography. By evaluating the local resolution of single-particle reconstructions and subtomogram averages for four example data sets, we report variable resolution across a 4- to 40-Å range.
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Structural basis of template strand deoxyuridine promoter recognition by a viral RNA polymerase
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Metadata
- Authors
- Kucukelbir, A., Sigworth, F. J., & Tagare, H. D.
- Venue
- Nature Methods
- Published
- 2013-11-10
- Volume
- 11
- Issue
- 1
- Pages
- 63-65
- ISSN
- 1548-7091 (ISSN-L)
- 1548-7105
- OpenAlex
- W2086812659
- Cited by
- 1,833
- References
- 3
- FWCI
- 44.13
- Type
- journal article
- Language
- en
- Open access
- green
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
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Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
