Distribution, Size, and Origin of Juvenile Chinook Salmon in Shallow-Water Habitats of the Lower Columbia River and Estuary, 2002–2007
Open accessAbstract
We monitored fish assemblages monthly at estuarine and tidal freshwater sites in the lower Columbia River and estuary from January 2002 through September 2007 in order to identify specific salmon stocks and migration stages that may benefit from habitat restoration initiatives. We report landscape-scale and seasonal variation in abundance, size, hatchery production (based on adipose fin clips), and genetic stock of origin of juvenile Chinook salmon Oncorhynchus tshawytscha. From fish implanted with coded wire tags (CWTs), we also determined the sites of release and inferred migration patterns. Chinook salmon were found in diverse life history stages and forms, including fry migrants, fingerlings, and (fewer) yearlings. Abundance increased in February and decreased in August, but salmon were present in all months each year. Spatial gradients in abundance and size were strong, with fewer but larger fish in brackish than in tidal freshwater zones. Overall, 30% of the Chinook salmon measured were fry (≤60 mm) that were likely naturally produced fish. These occurred at higher mean monthly proportions in tidal freshwater than in estuarine zones. In contrast, most larger fish were probably raised in hatcheries. Genetic stock assessment revealed that the majority of the Chinook salmon analyzed were from fall-run stock groups originating in the lower Columbia River, with 15% originating from other stock groups. Of these minority contributors, about 6% were identified as upper Columbia River summer–fall-run Chinook salmon while seven other stock groups accounted for the remainder, including 3% from transplants originating in southern Oregon's Rogue River. Recaptures of tagged fish revealed maximum migration times of 143 d for subyearlings and 52 d for yearlings, and both CWT and genetic data indicated that fall Chinook salmon from coastal rivers occasionally entered the estuary. These data demonstrated a widespread temporal and spatial distribution of subyearling Chinook salmon in shallow-water habitats of the lower Columbia River and estuary. Received June 28, 2011; accepted February 28, 2012
AI snapshot
Written from the paper’s full text.
TL;DR
This 6-year beach-seine study documents widespread seasonal and spatial use of shallow tidal freshwater and estuarine habitats in the lower Columbia River and estuary by juvenile Chinook salmon, mostly subyearling fall-run fish. It combines size, marks/tags, coded wire tags, and genetic stock identification to show that small natural-origin fry concentrate in tidal freshwater while larger, mostly hatchery-origin fish dominate downstream estuarine zones.
Key findings
- From 2002–2007, 11,988 Chinook salmon were caught; of 6,195 measured fish, 97.4% were subyearlings and 156 were yearlings. Fry (≤60 mm) made up 30.0% of measured Chinook and were most prevalent in tidal freshwater (41.5%) versus middle estuary (23.2%) and lower estuary (13.7%).
- Abundance and size showed strong spatial gradients: mean ± SE CPUE was 46.3 ± 7.3 in tidal freshwater and 10.8 ± 2.6 in the lower estuary; mean fork length was 68.7 ± 2.4 mm in tidal freshwater versus 85.2 ± 4.2 mm in the lower estuary and 84.1 ± 3.8 mm in the middle estuary.
- Genetic stock identification of 2,174 fish (2002–2006) found most were lower Columbia River fall-run stocks: West Cascade tributary fall (51%) and Spring Creek group tule fall (34%); minority contributors included upper Columbia River summer-fall (6%), West Cascade tributary spring (3%), Rogue River fall (3%), and Willamette River spring (1%).
- Marks and tags indicated probable hatchery origin for 16.1% of examined Chinook overall; subyearling adipose-fin-clip rates rose from 8.0 ± 2.0% in 2002–2006 to 53.2 ± 13.7% in 2007–2008. Coded-wire-tag recaptures showed maximum migration times of 143 d for subyearlings and 52 d for yearlings, with subyearling rates from 0.25 to 42 km/d and yearling rates from 2 to 26 km/d.
Methods
- Monthly beach-seine sampling from January 2002 through September 2007 at six primary sites grouped into tidal freshwater, middle estuary, and lower estuary zones; adverse weather prevented sampling on 25 of 460 (5.4%) sample dates.
- Fish were measured, weighed, examined for fin clips and tags, and sampled for microsatellite DNA; genetic stock composition was estimated with a 45-population baseline and ONCOR, with individual assignments restricted to ≥0.90 probability for size-frequency plots.
- Analyses used two-way and one-way ANOVA with Tukey’s HSD on log10-transformed CPUE and size by zone and season, linear regression of mean size over time, and coded-wire-tag recoveries to infer release location, migration duration, and migration rate.
Limitations
- Stated: no attempt was made to quantify site characteristics such as slope, submerged vegetation, or wave exposure; unmarked fish likely included both natural- and hatchery-origin fish because some Columbia River hatcheries released unmarked juveniles; yearling genetic stock composition was based on only 36 individuals; individual fish plots excluded about 25% of samples with lower-probability assignments, and Deschutes River summer-fall and middle/upper Columbia River spring runs were not represented in those plots.
- Stated: causes of spatial variation in subyearling size could not be definitively determined with the data; coded-wire-tag sample sizes were small, though 26 of 30 genetic stock estimates with ≥0.90 probability agreed with CWT origins.
- Evident: the study reports broad landscape and seasonal patterns from six primary beach-seine sites, so it does not characterize deep midchannel habitats or all shallow-water habitat types in the lower Columbia River and estuary.
Model-written summary. Check it against the paper before relying on it.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
3 of 39 cited sources checked · 2 supported · 0 flagged · accuracy not yet measured
- Interpretationcitation
Sites further upriver are likely to have a different stock component utilizing shallow-water habitat in those areas.
“Sites further upriver are likely to have a different stock component utilizing shallowwater habitat in those areas (Sather et al. 2009;Teel et al. 2009).”
Quote in the paperNot a substantial claim1 of 2 sources checked- cites Sather et al. 2009 source
Section 5.4 (Genetics; page not available) reports different predominant juvenile Chinook stock groups in lower-estuary nearshore habitats and the Sandy River delta, supporting a difference between locations along the river. It does not establish that sites farther upriver than the study area are likely to have a different stock component in their shallow-water habitats. (LLM, conf=0.78)
Experimental — accuracy not yet measured - cites Teel et al. 2009 source
- Findingown data
Overall, 30% of the Chinook salmon measured were fry (≤60 mm).
“Thirty percent of all Chinook salmon measured were fry (≤60 mm; Table 1; Figure 2).”
- Also stated in: § Abstract · hedged
“Overall, 30% of the Chinook salmon measured were fry (≤60 mm) that were likely naturally produced fish.”
Quote in the paperNot a substantial claim - Also stated in: § Abstract · hedged
- Findingown data
About 3% of the minority genetic contributors were from transplants originating in southern Oregon's Rogue River.
“Of these minority contributors, about 6% were identified as upper Columbia River summer-fall-run Chinook salmon while seven other stock groups accounted for the remainder, including 3% from transplants originating in southern Oregon's Rogue River.”
Quote in the paperNot a substantial claim - Findingown data
Fry occurred at higher mean monthly proportions in tidal freshwater than in estuarine zones.
“These occurred at higher mean monthly proportions in tidal freshwater than in estuarine zones.”
Quote in the paperSubstantial claim - Findingown data
Chinook salmon in the lower Columbia River and estuary were found in diverse life history stages and forms, including fry migrants, fingerlings, and fewer yearlings.
“Chinook salmon were found in diverse life history stages and forms, including fry migrants, fingerlings, and (fewer) yearlings.”
Quote in the paperSubstantial claim
- Findingown data
About 6% of the minority genetic contributors were upper Columbia River summer-fall-run Chinook salmon.
“Of these minority contributors, about 6% were identified as upper Columbia River summer-fall-run Chinook salmon while seven other stock groups accounted for the remainder, including 3% from transplants originating in southern Oregon's Rogue River.”
Quote in the paperNot a substantial claim - Findingown data
Recaptures of tagged fish revealed maximum migration times of 143 d for subyearlings and 52 d for yearlings.
“Recaptures of tagged fish revealed maximum migration times of 143 d for subyearlings and 52 d for yearlings, and both CWT and genetic data indicated that fall Chinook salmon from coastal rivers occasionally entered the estuary.”
Quote in the paperNot a substantial claim - Findingown data
Both coded wire tag and genetic data indicated that fall Chinook salmon from coastal rivers occasionally entered the estuary.
“Recaptures of tagged fish revealed maximum migration times of 143 d for subyearlings and 52 d for yearlings, and both CWT and genetic data indicated that fall Chinook salmon from coastal rivers occasionally entered the estuary.”
Quote in the paperSubstantial claim - Findingown data
Spatial gradients in subyearling Chinook salmon abundance were evident, with fewer fish at lower and middle estuary than at tidal freshwater sites.
“Spatial gradients in subyearling Chinook salmon abundance were evident, with fewer fish at lower and middle estuary than at tidal freshwater sites.”
Quote in the paperSubstantial claim - Findingown data
Fry comprised a relatively high percentage (>25%) of the salmon catch from January through April.
“Fry comprised a relatively high percentage (>25%) of the salmon catch from January through April.”
Quote in the paperNot a substantial claim - Findingown data
South Washington-north Oregon coastal fall Chinook salmon juveniles were present in the estuary during summer and fall.
“Somewhat surprisingly, we also identified the presence of south Washington-north Oregon coastal fall Chinook salmon juveniles in the estuary during summer and fall (Figures 9, 10).”
Quote in the paperSubstantial claim - Findingown data
During winter, abundance was significantly lower in the lower estuary than in the middle estuary or tidal freshwater zones.
“During winter, abundance was significantly lower in the lower estuary than in the middle estuary or tidal freshwater zones.”
Quote in the paperNot a substantial claim - Findingown data
Catches by zone varied within seasons.
“Catches by zone varied within seasons (Figure 4C).”
Quote in the paperNot a substantial claim - Findingown data
During spring, the Spring Creek group fall stock was predominant among fingerlings, with proportional abundances of 51% in the tidal freshwater, 70% in the middle estuary, and 86% in the lower estuary zones.
“During spring, the Spring Creek group fall stock was predominant among fingerlings, with proportional abundances of 51% in the tidal freshwater, 70% in the middle estuary, and 86% in the lower estuary zones (Figures 91011).”
Quote in the paperSubstantial claim - Findingown data
There were strong spatiotemporal patterns to Chinook salmon life history stages, with smaller fish (and especially fry) being concentrated in the tidal freshwater zone and contemporaneously larger fish at brackish-water sites.
“There were strong spatiotemporal patterns to Chinook salmon life history stages, with smaller fish (and especially fry) being concentrated in the tidal freshwater zone and contemporaneously larger fish at brackish-water sites.”
Quote in the paperSubstantial claim - Findingown data
Individual yearling fish were captured at all landscape zones outside the March-May window.
“However, individual yearling fish were captured at all landscape zones outside this window (Figure 2).”
Quote in the paperNot a substantial claim - Findingown data
In spring and summer-fall, salmon at the lower and middle estuary sites were significantly larger than those in the tidal freshwater zone.
“In spring and summer-fall, salmon at the lower and middle estuary sites were significantly larger than those in the tidal freshwater zone.”
Quote in the paperSubstantial claim - Findingown data
The slopes of the regression lines were substantially greater for lower and middle estuary zones than for the tidal freshwater zone.
“However, the slopes of the regression lines were substantially greater for lower and middle estuary zones than for the tidal freshwater zone.”
Quote in the paperSubstantial claim - Findingown data
From CWT data, there was no relation between the number of days postrelease or migration rate and size at capture.
“From CWT data, we found no relation between the number of days postrelease or migration rate and size at capture (Figure 12), although Dawley et al. (1986) found that larger fish tended to migrate faster than smaller fish.”
Quote in the paperNot a substantial claim - Findingnone given
Fingerlings were not present during winter.
“Fingerlings were not present during winter.”
Quote in the paperNot a substantial claim - Findingown data
Size at capture was positively related to capture date (linear regression P < 0.001; r2 = 0.56).
“Size at capture was positively related to capture date (Figure 12; linear regression P < 0.001; r 2 = 0.56).”
Quote in the paperNot a substantial claim - Findingown data
Based on regression statistics for size at capture, salmon reached the fry-to-fingerling size threshold much earlier at middle and lower estuary sites (31 March and 5 April) than in tidal freshwater areas (3 May).
“Based on regression statistics for size at capture (Figure 6), salmon reached the fry-to-fingerling size threshold much earlier at middle and lower estuary sites (31 March and 5 April) than in tidal freshwater areas (3 May).”
Quote in the paperSubstantial claim - Findingown data
13.7% of the Chinook salmon measured in the lower estuary zone were fry-sized animals in close proximity to the ocean.
“We note however, that 13.7% of the Chinook salmon measured in the lower estuary zone were frysized animals in close proximity to the ocean (Table 1).”
Quote in the paperSubstantial claim - Findingown data
During summer and fall months, fingerlings from several stocks not native to the Columbia River basin were collected in the estuary.
“During summer and fall months, fingerlings from several stocks not native to the Columbia River basin were collected in the estuary (Figures 9, 10).”
Quote in the paperNot a substantial claim - Findingown data
Overall, from 2002 to 2007, 16.1% of the Chinook salmon examined were marked or tagged to indicate a probable hatchery origin.
“Overall, from 2002 to 2007, 16.1% of the Chinook salmon we examined were marked or tagged to indicate a probable hatchery origin.”
Quote in the paperNot a substantial claim- Rests on an assumption: Marks or tags, especially adipose fin clips, indicate probable hatchery origin.
- Findingown data
Genetic data from 2,174 yearling, fingerling, and fry Chinook salmon collected from 2002 to 2006 were used to estimate genetic stock composition.
“Genetic data from 2,174 yearling, fingerling, and fry Chinook salmon collected from 2002 to 2006 were used to estimate genetic stock composition (Table A.2).”
Quote in the paperSubstantial claim - Findingnone given
Few yearling Chinook or other salmon species were present.
“Few yearling Chinook or other salmon species were present.”
Quote in the paperNot a substantial claim - Findingown data
Shallow-water habitat use varied by life history type among Chinook salmon.
“Shallow-water habitat use varied by life history type among Chinook salmon.”
Quote in the paperSubstantial claim - Findingown data
Genetic analysis of 36 yearling fish revealed that 83% were spring Chinook salmon from West Cascade tributaries and the Willamette River.
“Genetic analysis of 36 yearling fish revealed that 83% were spring Chinook salmon from West Cascade tributaries and the Willamette River (Figure 8).”
Quote in the paperNot a substantial claim - Findingown data
All coded-wire-tagged fish were hatchery raised except two naturally produced individuals from the Lewis River.
“All coded-wiretagged fish were hatchery raised except two naturally produced individuals from the Lewis River.”
Quote in the paperNot a substantial claim - Findingown data
Mean size also increased significantly over time.
“Mean size also increased significantly over time.”
Quote in the paperNot a substantial claim - Findingown data
Among spring fry in tidal freshwater, the Willamette River spring genetic stock group was the most abundant, comprising 78.7% of 218 fish.
“TFW 218 0.787 0.020 0.000 0.163 0.000 0.000 0.011 0.009 0.000 0.004 0.005”
Quote in the paperNot a substantial claim - Findingown data
The majority of tagged subyearling Chinook salmon had been released from hatcheries below Bonneville Dam or from the Spring Creek Hatchery.
“The majority of tagged subyearling Chinook salmon had been released from hatcheries below Bonneville Dam (likely composed predominately of West Cascade tributary fall stock) or from the Spring Creek Hatchery (Spring Creek group fall stock).”
Quote in the paperNot a substantial claim - Findingown data
CWT recoveries from yearling fish indicated that most came from hatcheries between rkm 100 and 200, primarily the Lewis and Kalama Rivers, or else from the Willamette River.
“Similarly, CWT recoveries from yearling fish indicated that most came from hatcheries between rkm 100 and 200, primarily the Lewis and Kalama Rivers, or else from the Willamette River (Table 5).”
Quote in the paperNot a substantial claim - Findingown data
Approximately 85% of all fish analyzed were from the West Cascade tributary and Spring Creek group fall Chinook salmon stocks.
“Approximately 85% of all fish analyzed were from the West Cascade tributary and Spring Creek group fall Chinook salmon stocks (Figure 8).”
Quote in the paperSubstantial claim - Findingown data
This slope was similar to that derived for fish captured at lower and middle estuary sites.
“This slope was similar to that derived for fish captured at lower and middle estuary sites (Figure 2).”
Quote in the paperNot a substantial claim - Findingown data
The genetic composition of juvenile salmon in shallow-water habitats of the Columbia River estuary was dominated by fish from the lower Columbia River ESU.
“The genetic composition of juvenile salmon in shallow-water habitats of the Columbia River estuary was dominated by fish from the lower Columbia River ESU.”
Quote in the paperSubstantial claim - Findingown data
Seasonally, subyearling length was greater in summer-fall (99.5 ± 2.5 mm) than in spring (69.0 ± 1.7 mm) or winter (62.9 ± 5.4 mm).
“Seasonally (Figure 5B), length was greater in summer-fall (99.5 ± 2.5 mm) than in spring (69.0 ± 1.7 mm) or winter (62.9 ± 5.4 mm).”
Quote in the paperNot a substantial claim - Findingown data
Spring Chinook salmon fry from the West Cascade tributary and Willamette River spring-run stocks were identified in the samples.
“It is especially noteworthy that spring Chinook salmon fry from the West Cascade tributary and Willamette River spring-run stocks were identified in the samples (Figures 91011).”
Quote in the paperSubstantial claim - Findingreasoning
By the summer-fall season, salmon in tidal freshwater habitats were 20-50 mm smaller than those caught further downstream during the same time period.
“As a result, by the summer-fall season, salmon in tidal freshwater habitats were 20-50 mm smaller than those caught further downstream during the same time period.”
Quote in the paperSubstantial claim - Findingown data
Of the 11 genetic stock groups identified, eight contributed at least 1% to the samples.
“Of the 11 genetic stock groups identified, eight contributed at least 1% to the samples (Figure 8).”
Quote in the paperNot a substantial claim - Findingown data
Most tagged yearling Chinook salmon originated in the Kalama and Lewis rivers or in the Willamette River.
“Most tagged yearling Chinook salmon originated in the Kalama and Lewis rivers (West Cascade tributary spring stock) or in the Willamette River (Willamette River spring stock).”
Quote in the paperNot a substantial claim - Findingown data
Subyearling recoveries were dominated by releases from the Spring Creek, Big Creek, and Elochoman River hatcheries.
“Subyearling recoveries were dominated by releases from the Spring Creek, Big Creek, and Elochoman River hatcheries.”
Quote in the paperNot a substantial claim - Findingreasoning
Mean sizes at all sites tended to increase sharply during April through June each year.
“Additionally, mean sizes at all sites tended to increase sharply during April through June each year”
Quote in the paperNot a substantial claim - Findingown data
Among summer-fall fingerlings in tidal freshwater, the Willamette River spring genetic stock group was the most abundant, comprising 82.7% of 291 fish.
“TFW 291 0.827 0.015 0.000 0.055 0.000 0.000 0.082 0.022 0.000 0.000 0.000”
Quote in the paperNot a substantial claim - Findingown data
In beach seine samples from the lower Columbia River and estuary during 2002-2007, fingerling Chinook salmon were the most abundant life history stage overall, comprising 67.5% of 6,195 fish.
“| Fingerling | 1,601 | 55.6 | 1,640 | 74.3 | 939 | 84.8 | 4,180 | 67.5 |”
- Also stated in: § Consequences for Restoration · plain
“| Total | 2,881 | | 2,207 | | 1,107 | | 6,195 | |”
Quote in the paperNot a substantial claim - Also stated in: § Consequences for Restoration · plain
- Findingown data
Of the 204 CWT-tagged Chinook salmon recaptured, 143 had retrievable data from which release location and time and migration duration and rate were determined.
“Of these, 143 had retrievable data from which we determined release location and time and calculated migration duration and rate (Figure 12).”
Quote in the paperSubstantial claim - Findingown data
Even at a broad scale, stock-specific migration windows were observed.
“Even at this broad scale, stock-specific migration windows were observed.”
Quote in the paperSubstantial claim - Findingown data
Among summer-fall fry in tidal freshwater, the Willamette River spring genetic stock group was the most abundant, comprising 97.1% of 57 fish.
“TFW 57 0.971 0.000 0.000 0.027 0.000 0.000 0.000 0.000 0.000 0.001 0.000”
Quote in the paperNot a substantial claim - Findingown data
In the lower estuary, catches were significantly lower in winter than in other seasons.
“In the lower estuary, catches were significantly lower in winter than in other seasons”
Quote in the paperNot a substantial claim - Findingown data
Fry from several other genetic groups also used the shallow estuary beach habitats, including small proportions of Upper Columbia summer-fall and Snake fall stocks during spring.
“Fry from several other genetic groups also used the shallow estuary beach habitats, including small proportions of Upper Columbia summer-fall and Snake fall stocks during spring.”
Quote in the paperNot a substantial claim - Findingown data
Although sample size was small, 26 of 30 genetic stock estimates with assignment probabilities of 0.90 or greater agreed with the origins determined using CWTs.
“Although our sample size was small, 26 of 30 genetic stock estimates with assignment probabilities of 0.90 or greater agreed with the origins determined using CWTs (Table 3).”
Quote in the paperSubstantial claim- Rests on an assumption: Genetic stock assignments with probability of 0.90 or greater correctly identify the stock of origin.
- Findingown data
The mean size of salmon in the tidal freshwater zone remained near the fry size threshold (60 mm) in both winter and spring.
“The mean size of salmon in the tidal freshwater zone remained near the fry size threshold (60 mm) in both winter and spring.”
Quote in the paperNot a substantial claim - Findingown data
The West Cascade tributary spring stock had the greatest contribution (12%) in winter at tidal freshwater sites.
“The West Cascade tributary spring stock had the greatest contribution (12%) in winter at tidal freshwater sites.”
Quote in the paperNot a substantial claim - Findingown data
In beach seine samples from 2002-2007, the proportion of fingerling Chinook salmon increased from tidal freshwater (55.6%) to middle estuary (74.3%) to lower estuary (84.8%).
“| Fingerling | 1,601 | 55.6 | 1,640 | 74.3 | 939 | 84.8 | 4,180 | 67.5 |”
Quote in the paperSubstantial claim - Findingown data
From 2002 to 2007, we recaptured 204 Chinook salmon that had been tagged with CWTs.
“From 2002 to 2007, we recaptured 204 Chinook salmon that had been tagged with CWTs.”
Quote in the paperSubstantial claim - Findingown data
Mean fork length of subyearling Chinook salmon was significantly greater in the lower (85.2 ± 4.2 mm) and middle estuary zones (84.1 ± 3.8 mm) than in the tidal freshwater zone (68.7 ± 2.4 mm).
“Mean ± SE fork length was significantly greater in the lower (85.2 ± 4.2 mm) and middle estuary zones (84.1 ± 3.8 mm) than in the tidal freshwater zone (68.7 ± 2.4 mm).”
Quote in the paperSubstantial claim - Findingown data
Just two stock groups, the West Cascade tributary fall (51%) and Spring Creek group tule fall (34%), accounted for the majority of the samples.
“However, just two stock groups, the West Cascade tributary fall (51%) and Spring Creek group tule fall (34%), accounted for the majority of the samples.”
Quote in the paperNot a substantial claim - Findingown data
Small proportions of spring-run stock contributed to fry life history stages.
“We also observed small proportions of spring-run stock contributing to fry life history stages (Figures 91011).”
Quote in the paperNot a substantial claim - Findingown data
The recoveries of tagged fish also reflected some minor stock contributors.
“The recoveries of tagged fish also reflected some minor stock contributors.”
Quote in the paperNot a substantial claim - Findingown data
All other genetic stock groups in the analysis also contributed 1% or more to samples grouped by life history type, season, and zone.
“However, all of the other genetic stock groups in our analysis also contributed 1% or more to our samples grouped by life history type, season, and zone (Table A.2)”
Quote in the paperNot a substantial claim - Findingown data
Thirty-two percent of migrants were captured more than 1 month after release.
“Thirty-two percent of migrants were captured more than 1 month after release.”
Quote in the paperSubstantial claim - Findingown data
Yearling Chinook salmon with CWTs were present from March through May.
“Yearling Chinook salmon with CWTs were present from March through May (Figure 12).”
Quote in the paperNot a substantial claim - Findingown data
West Cascade tributary fall and Spring Creek group fall were the two dominant stock groups of Chinook salmon fry.
“Again, the West Cascade tributary fall and Spring Creek group fall were the two dominant stock groups of Chinook salmon fry.”
Quote in the paperNot a substantial claim - Findingown data
Information from the CWTs revealed diverse timing and duration of migration for both subyearling and yearling life history types.
“Information from the CWTs revealed diverse timing and duration of migration for both the subyearling and yearling life history types (Figure 12; Tables 4, 5).”
Quote in the paperSubstantial claim - Findingown data
During summer-fall, the West Cascade tributary fall stock comprised 97% of the fry population at tidal freshwater sites.
“During summer-fall, the West Cascade tributary fall stock comprised 97% of the fry population at tidal freshwater sites, the only zone where enough samples for analysis were found.”
Quote in the paperSubstantial claim - Findingown data
No corresponding difference was observed in the percent of yearling fish that were adipose fin clipped (70.8 ± 7.8 versus 73.7 ± 15.7).
“No corresponding difference was observed in the percent of yearling fish that were adipose fin clipped (70.8 ± 7.8 versus 73.7 ± 15.7).”
Quote in the paperNot a substantial claim - Findingown data
Release information from CWT tag codes reflected stock compositions similar to those obtained through genetic analysis.
“The release information from the tag codes reflected stock compositions similar to those obtained through genetic analysis.”
Quote in the paperSubstantial claim - Findingown data
Among winter fry in tidal freshwater, the Willamette River spring genetic stock group was the most abundant, comprising 47.2% of 83 fish.
“TFW 83 0.472 0.120 0.008 0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000”
Quote in the paperNot a substantial claim - Findingown data
Significant differences were found in mean salmon size between seasons within each zone.
“Significant differences also were found in mean salmon size between seasons within each zone (Figure 5D).”
Quote in the paperNot a substantial claim - Findingown data
The seasonal stock composition of Chinook salmon fry varied relative to the pattern of fingerlings in the tidal freshwater and middle estuary zones.
“The seasonal stock composition of fry varied somewhat relative to the pattern of fingerlings in the tidal freshwater and middle estuary zones, the only two habitat types for which sufficient samples were collected for analysis (Figures 91011).”
Quote in the paperSubstantial claim - Findingown data
In the middle estuary, spring catches were significantly larger than those in other seasons.
“while in the middle estuary, spring catches were significantly larger than those in other seasons.”
Quote in the paperNot a substantial claim - Findingcitation
The Spring Creek group stock played a lesser role in the proportional abundances of fry than of fingerlings, consistently across years.
“However, the Spring Creek group stock played a lesser role in the proportional abundances of fry than of fingerlings, a pattern that was consistent across years (D.Teel, unpublished).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites D.Teel, unpublished
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Findingown data
In all years and zones, subyearling Chinook salmon mean size increased with time.
“In all years and zones, subyearling Chinook salmon mean size increased with time (Figure 6).”
Quote in the paperNot a substantial claim - Findingown data
There were seasonal differences in the proportional abundance of fingerlings of less dominant stocks.
“There were also seasonal differences in the proportional abundance of fingerlings of less dominant stocks.”
Quote in the paperNot a substantial claim - Findingown data
Approximately 1% of the juveniles analyzed were from the coastal fall-spring stock group and originated outside the Columbia River basin.
“Approximately 1% of the juveniles analyzed were from the coastal fall-spring stock group and originated outside the Columbia River basin.”
Quote in the paperNot a substantial claim - Findingown data
From the genetic composition of fingerlings (>60 mm), distinct spatial and seasonal shifts in stock groups were observed.
“From the genetic composition of fingerlings (>60 mm), we observed distinct spatial and seasonal shifts in stock groups that 91011).”
Quote in the paperSubstantial claim - Findingown data
Increased contributions of Rogue River fall (11% at middle and 8% at lower estuary sites) and Coastal fall (6% at middle and 4% at lower estuary sites) fingerlings occurred from the spring to summer-fall periods.
“Increased contributions of Rogue River fall (11% at middle and 8% at lower estuary sites) and Coastal fall (6% at middle and 4% at lower estuary sites) fingerlings also occurred from the spring to summer-fall periods.”
Quote in the paperNot a substantial claim - Study design and conductreasoning
Because Columbia River hatcheries also released juvenile Chinook salmon without identifying marks during the study period, samples of unmarked fish likely included both natural and hatchery-origin fish.
“However, because Columbia River hatcheries also released juvenile Chinook salmon without such identifying marks during our study period, our samples of unmarked fish likely included both natural and hatchery-origin fish.”
Quote in the paperSubstantial claim - Premisecitation
The latest assessment of fish assemblages and prey resources in the Columbia River estuary was completed more than 20 years ago.
“The latest assessment of fish assemblages and prey resources in the Columbia River estuary was completed more than 20 years ago (Bottom and Jones 1990).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Bottom and Jones 1990 source
- Interpretationown data
Most larger Chinook salmon were probably raised in hatcheries.
“In contrast, most larger fish were probably raised in hatcheries.”
Quote in the paperSubstantial claim - Premisecitation
Most recent studies have concentrated on the migration and mortality patterns of larger salmon fingerlings and especially smolts that can be fitted with PIT, acoustic, or radio tags in order to track downstream movements or estimate survival of marked hatchery fish.
“Most recent studies have concentrated on the migration and mortality patterns of larger salmon fingerlings and especially smolts that can be fitted with passive integrated transponder (PIT), acoustic, or radio tags (e.g., Collis et al. 2001;Ledgerwood et al. 2005;Clemens et al. 2009) in order to track the downstream movements or estimate the survival of various groups of marked hatchery fish.”
Quote in the paperSubstantial claim0 of 3 sources checked - Interpretationown data
The data demonstrated a widespread temporal and spatial distribution of subyearling Chinook salmon in shallow-water habitats of the lower Columbia River and estuary.
“These data demonstrated a widespread temporal and spatial distribution of subyearling Chinook salmon in shallow-water habitats of the lower Columbia River and estuary.”
Quote in the paperSubstantial claim - Premisecitation
These later studies provide no information on the spatial-temporal distribution and genetic stock of origin of the smaller subyearling fish known to be estuarine dependent in other systems.
“These later studies provide no information on the spatial-temporal distribution and genetic stock of origin of the smaller subyearling fish known to be estuarine dependent in other systems (Healey 1982).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Healey 1982 source
- Premisecitation
In the LCRE, historical knowledge of Chinook salmon life history diversity is based on a limited study of fork length, timing, and scale circuli data dating from 1914 to 1916.
“In the LCRE, historical knowledge of Chinook salmon life history diversity is based on a limited study of fork length, timing, and scale circuli data dating from 1914 to 1916 (Rich 1920).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Rich 1920
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Interpretationown data
Fry-sized Chinook salmon were likely naturally produced.
“Overall, 30% of the Chinook salmon measured were fry (≤60 mm) that were likely naturally produced fish.”
Quote in the paperSubstantial claim- The authors state this as an assumption: The majority of fry-sized Chinook salmon captured were naturally spawned.
- Interpretationown data
This study identified contemporary spatiotemporal patterns in salmonid species and stock composition, life history type, and migration behavior at shallow tidal freshwater and estuarine sites in the lower Columbia River and estuary.
“This study identified contemporary spatiotemporal patterns in salmonid species and stock composition, life history type, and migration behavior at shallow tidal freshwater and estuarine sites in the lower Columbia River and estuary.”
Quote in the paperSubstantial claim - Interpretationcitation
The presence of stocks from the Rogue River in southern Oregon is explained by a fishery enhancement program that released these fish into the lower Columbia River.
“The presence of stocks from the Rogue River in southern Oregon is explained by a fishery enhancement program that released these fish into the lower Columbia River (North et al. 2006).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites North et al. 2006
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Interpretationown data
The high percentage and persistence of fry found in the tidal freshwater zone indicates that small fish were intensively utilizing these areas.
“Although the causes of this spatial variation in size cannot be definitively determined with our data, the high percentage and persistence of fry found in the tidal freshwater zone indicates that small fish were intensively utilizing these areas.”
Quote in the paperSubstantial claim - Interpretationown data
Both CWT recoveries and stock group assignments for fish captured on the Oregon shoreline confirmed that some juvenile Chinook salmon from coastal rivers move from the ocean into the Columbia River estuary.
“Both CWT recoveries and stock group assignments for fish captured on the Oregon shoreline confirmed that some juvenile Chinook salmon from coastal rivers move from the ocean into the Columbia River estuary.”
Quote in the paperSubstantial claim - Interpretationown data
The new data support earlier observations that the life histories of spring Chinook salmon stocks include not only yearlings but fry and fingerling migrants that rear in shallow habitats and enter the ocean as subyearlings.
“The new data therefore support earlier observations that the life histories of spring Chinook salmon stocks include not only yearlings but fry and fingerling migrants that rear in shallow habitats and enter the ocean as subyearlings (Craig and Townsend 1946;Hymer et al. 1992).”
Quote in the paperSubstantial claim0 of 2 sources checked- cites Craig and Townsend 1946
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- cites Hymer et al. 1992
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Study design and conductown data
The Deschutes River summer-fall and middle and upper Columbia River spring runs are not represented in the individual fish genetics plots because no fish from those two stocks met the 0.90 probability threshold.
“However, the Deschutes River summer-fall and middle and upper Columbia River spring runs are not represented in the individual fish genetics plots because no fish from those two stocks met the 0.90 probability threshold.”
Quote in the paperNot a substantial claim - Interpretationown data
Upper Clifton Channel was identified as a rearing zone for small fish.
“which identified this site as a rearing zone for small fish.”
Quote in the paperSubstantial claim - Interpretationreasoning
Habitat restoration in the lower river and estuary will likely benefit all stocks with populations whose life history patterns utilize shallow-water environments, including those which are at present severely depressed.
“Habitat restoration in the lower river and estuary will likely benefit all stocks with populations whose life history patterns utilize shallow-water environments, including those which are at present severely depressed.”
Quote in the paperNot a substantial claim - Interpretationreasoning
The presence of fry at Clatsop Spit at the river mouth indicates the potential for Chinook salmon to enter the ocean with minimal rearing, either in natal streams or the estuary.
“However, the presence of fry at Clatsop Spit at the river mouth indicates the potential for Chinook salmon to enter the ocean with minimal rearing, either in natal streams or the estuary.”
Quote in the paperSubstantial claim - Interpretationreasoning
These catch data again reflected the findings from the genetic analysis.
“These catch data again reflected the findings from the genetic analysis.”
Quote in the paperNot a substantial claim - Interpretationcitation
These data are consistent with recent evidence of subyearling spring Chinook salmon juveniles rearing in lower Willamette River wetlands during winter and spring.
“While few in number, these data are consistent with recent evidence of subyearling spring Chinook salmon juveniles rearing in lower Willamette River wetlands during winter and spring (Teel et al. 2009).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Teel et al. 2009 source
- Interpretationcitation
These data indicate that yearling fish are capable of rapidly transiting from Bonneville Dam to the ocean.
“These data indicate that yearling fish are capable of rapidly transiting from Bonneville Dam to the ocean.”
Quote in the paperNot a substantial claim - Interpretationnone given
In the CRE, mass hatchery production of large Chinook and coho salmon and steelhead smolts, particularly upper-river spring-summer yearlings, accentuates the contribution of freshwater-rearing phenotypes, which tend to enter the estuary at large sizes and move rapidly to the ocean.
“In the CRE, mass hatchery production of large Chinook and coho salmon and steelhead smolts, particularly upper-river spring-summer yearlings, accentuates the contribution of freshwater-rearing phenotypes, which tend to enter the estuary at large sizes and move rapidly to the ocean.”
Quote in the paperSubstantial claim
- Classified as probably not a substantial claim. 20
- May combine two claims. 88
- The quote only partly states this claim. 4
Probably not a substantial claim: may not pass S2 (checkable), S3 (load-bearing).
PremisecitationThe ability of many salmon stocks to express diverse life histories during the juvenile phase is thought to be an important adaptive mechanism for mitigating natural environmental variability.
“The ability of many salmon stocks to express diverse life histories during the juvenile phase is thought to be an important adaptive mechanism for mitigating natural environmental variability (Healey 1991;Waples et al. 2009).”
Quote in the paperNot a substantial claim1 of 2 sources checked- cites Healey 1991
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- cites Waples et al. 2009 source
May combine two claims.
FindingcitationMore than half of the unmarked juveniles observed by Sather et al. (2009) were stocks from the interior Columbia River basin, a much greater proportion than observed at our shallow-water sites.
“However, more than half of the unmarked juveniles observed by Sather et al. (2009) were stocks from the interior Columbia River basin, a much greater proportion than we observed at our shallow-water sites.”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Sather et al. (2009) source
May combine two claims.
Findingown dataSpatial gradients in Chinook salmon abundance and size were strong, with fewer but larger fish in brackish than in tidal freshwater zones.
“Spatial gradients in abundance and size were strong, with fewer but larger fish in brackish than in tidal freshwater zones.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe majority of Chinook salmon analyzed genetically were from fall-run stock groups originating in the lower Columbia River, with 15% originating from other stock groups.
“Genetic stock assessment revealed that the majority of the Chinook salmon analyzed were from fall-run stock groups originating in the lower Columbia River, with 15% originating from other stock groups.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataChinook salmon abundance increased in February and decreased in August, but salmon were present in all months each year.
“Abundance increased in February and decreased in August, but salmon were present in all months each year.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataDuring summer-fall, catches were moderate throughout the tidal gradient but significantly higher in the tidal freshwater zone.
“During summer-fall, catches were moderate throughout the tidal gradient but significantly higher in the tidal freshwater zone.”
Quote in the paperNot a substantial claimThe quote only partly states this claim.
Findingown dataCoded-wire-tagged subyearling Chinook salmon were recaptured at estuarine and tidal freshwater sites with time to capture ranging from 4 to 137 days.
“| Elochoman River | WA | 1 | 7 Jun 2007 | LES | WA | 4 | 10.50 |”
- Also stated in: § Consequences for Restoration · plain
“| Kalama River | WA | 1 | 18 Jun 2002 | ETI | OR | 137 | 0.61 |”
Quote in the paperSubstantial claim- Also stated in: § Consequences for Restoration · plain
May combine two claims.
Findingown dataTagged fish were recovered from March through October and were migrating from 1 to 143 d at rates between 0.25 and 42 km/d.
“Tagged fish were recovered from March through October and were migrating from 1 to 143 d at rates between 0.25 and 42 km/d.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe lowest subyearling abundances were found in the lower estuary zone, where abundance peaked in July.
“The lowest abundances were found in the lower estuary zone, where abundance peaked in July.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataIn the lower estuary, mean size increased from winter to summer-fall, while in the other zones fish were significantly larger in summer-fall than in other seasons.
“In the lower estuary, mean size increased from winter to summer-fall, while in the other zones fish were significantly larger in summer-fall than in other seasons.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataIn all years, Chinook salmon were found during every month, although at low abundance during October-January.
“In all years, we found Chinook salmon during every month, although at low abundance during October-January (Figures 2, 3).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThe presence of fish in the 30-40-mm range was generally synchronous across all sample sites in January-March, indicating a rapid dispersion of newly emerged fish from their natal streams.
“The presence of fish in the 30-40-mm range was generally synchronous across all sample sites in January-March (Figures 2, 7), indicating a rapid dispersion of newly emerged fish from their natal streams, as has been observed elsewhere (e.g., Healey 1980;Bottom et al. 2005a).”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites Healey 1980
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- cites Bottom et al. 2005a
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
May combine two claims.
Findingnone givenFewer fry were captured in the middle estuary zone, where they were most abundant from March through June but were present as late as August.
“Fewer fry were captured in the middle estuary zone, where they were most abundant from March through June but were present as late as August.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThe lowest numbers of fry were found in the lower estuary zone, where they were most abundant in March but were largely absent after June.
“The lowest numbers of fry were found in the lower estuary zone, where they were most abundant in March but were largely absent after June.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataUpper Columbia River summer-fall fingerlings made up a larger proportion in summer-fall than in spring, most notably in the lower estuary zone, where the stock contributed 1% in spring and 20% in summer-fall.
“Upper Columbia River summer-fall fingerlings made up a larger proportion in summer-fall than in spring, most notably in the lower estuary zone, where the stock contributed 1% in spring and 20% in summer-fall.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataAt tidal freshwater sites in spring, the Spring Creek group stock accounted for 16% of the catch for fry but 51% for fingerlings.
“At tidal freshwater sites in spring, the Spring Creek group stock accounted for 16% of the catch for fry but 51% for fingerlings, as noted above.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThe highest overall percentage of fry occurred in the tidal freshwater zone (41.5%), followed by the middle (23.2%) and lower estuary (13.7%) zones.
“The highest overall percentage of fry occurred in the tidal freshwater zone (41.5%), followed by the middle (23.2%) and lower estuary (13.7%) zones (Figure 7).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataWe captured only three PIT-tagged fish; two were from lower river tributaries, and the other was a subyearling migrant released from the Snake River 10 km above the confluence with the Clearwater River.
“We captured only three PIT-tagged fish; two were from lower river tributaries, and the other was a subyearling migrant released from the Snake River 10 km above the confluence with the Clearwater River.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThere were significant differences among catches across seasons, with catches highest during spring (50.7 ± 6.9), intermediate in summer-fall (21.4 ± 3.6), and lowest during winter (5.9 ± 1.5).
“There were significant differences among catches across seasons (Figure 4B), with catches being highest during spring (50.7 ± 6.9), intermediate in summer-fall (21.4 ± 3.6), and lowest during winter (5.9 ± 1.5).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataChinook salmon subyearlings were found year-round but were broadly distributed in time from February through August.
“Chinook salmon subyearlings were found year-round but were broadly distributed in time from February through August.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThe Spring Creek group tule fall-run stock was also present in spring samples but was largely absent during summer-fall.
“The other tule fall-run stock in our analysis, the Spring Creek group, was also present in spring samples but was largely absent during summer-fall.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataAt middle estuary sites, Spring Creek group fish contributed 34% to the fry population but 70% to fingerling life histories.
“Similarly, at middle estuary sites, the Spring Creek group fish contributed 34% to the fry population, but more than double that amount (70%) to fingerling life histories.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThe highest mean monthly catches of subyearlings occurred in the tidal freshwater zone, with a broad peak from April to June.
“The highest mean monthly catches of subyearlings occurred in the tidal freshwater zone, with a broad peak from April to June (Figure 3).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThirteen percent of subyearlings migrated at rates >20 km/d, 28% at rates between 10 and 20 km/d, and 58% at rates <10 km/d.
“Thirteen percent of subyearlings migrated at rates >20 km/d, 28% at rates between 10 and 20 km/d, and 58% at rates <10 km/d.”
Quote in the paperNot a substantial claimThe quote only partly states this claim.
Findingown dataIn beach seine samples from 2002-2007, yearling Chinook salmon were rare in all zones, comprising 2.5% of the total catch.
“| Yearling | 84 | 2.9 | 56 | 2.5 | 16 | 1.4 | 156 | 2.5 |”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataIn beach seine samples from 2002-2007, the proportion of fry Chinook salmon was highest in tidal freshwater (41.5%) and lowest in the lower estuary (13.7%).
“| Fry | 1,196 | 41.5 | 511 | 23.2 | 152 | 13.7 | 1,859 | 30.0 |”
Quote in the paperSubstantial claimMay combine two claims.
FindingreasoningBy November mean fork lengths in the tidal freshwater zone remained <100 mm while fish at the lower and middle estuary stations averaged between 120 and 150 mm.
“For example, by November mean fork lengths in the tidal freshwater zone remained <100 mm while fish at the lower and middle estuary stations averaged between 120 and 150 mm.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe Spring Creek group fall stock contributed the greatest proportion of fry during winter, comprising 40% in the tidal freshwater zone and 75% in the middle estuary zone.
“The Spring Creek group fall stock contributed the greatest proportion of fry during winter, comprising 40% in the tidal freshwater zone and 75% in the middle estuary zone.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataIn the tidal freshwater zone, all seasons differed, with spring having the highest and winter the lowest catches.
“In the tidal freshwater zone, all seasons differed, with spring having the highest and winter the lowest catches.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataYearling abundance was concentrated in March and early April in the tidal freshwater zone, where they composed 2.9% of the measured population.
“Yearling abundance was concentrated in March and early April in the tidal freshwater zone, where they composed 2.9% of the measured population.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataFish released from Spring Creek Hatchery exhibited the highest migration rate as well as some of the lowest migration rates, along with fish released from the Kalama and Cowlitz hatcheries.
“Fish released from Spring Creek Hatchery exhibited the highest migration rate as well as some of the lowest migration rates, along with fish released from the Kalama and Cowlitz hatcheries.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataOf the 6,195 fish that were measured, 97.4% were subyearlings and only 156 were yearlings.
“Of the 6,195 fish that were measured, 97.4% were subyearlings and only 156 were yearlings (Figure 2; Table 1).”
Quote in the paperNot a substantial claimThe quote only partly states this claim.
Findingown dataAmong yearling Chinook salmon across all zones and seasons, the Spring Creek fall genetic stock group was the most abundant, comprising 46.2% of 36 fish.
“All 36 0.028 0.462 0.371 0.034 0.000 0.017 0.062 0.000 0.028 0.000 0.000”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThe furthest migrant was a yearling Chinook salmon that had originated in the Tucannon River, Washington (rkm 680), and represented the Snake River spring stock.
“The furthest migrant was a yearling Chinook salmon that had originated in the Tucannon River, Washington (rkm 680), and represented the Snake River spring stock.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataWest Cascade Tributary fall fingerlings were the second most abundant stock, with the highest proportion in tidal freshwater (45%) and the lowest in the lower estuary zone (5%).
“West Cascade Tributary fall fingerlings were the second most abundant stock, with the highest proportion occurring in the tidal freshwater (45%) and the lowest proportion in the lower estuary zone (5%).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataMean salmon fork length differed significantly among zones, with the smallest mean size at tidal freshwater sites and the largest at lower estuary sites.
“Mean salmon fork length differed significantly among zones, with the smallest mean size being found at tidal freshwater sites and the largest at lower estuary sites (Figure 5).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataSmaller stock proportions included the upper Columbia River summer-fall (6%), West Cascade tributary spring (3%), Rogue River fall (3%), and Willamette River spring (1%) stocks.
“Smaller stock proportions included the upper Columbia River summer-fall (6%), West Cascade tributary spring (3%), Rogue River fall (3%), and Willamette River spring (1%) stocks (Table A.2).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThe fewest number and smallest proportion of yearlings were found in the lower estuary zone (1.4%), where abundance peaked during April and May.
“The fewest number and smallest proportion of yearlings were found in the lower estuary zone (1.4%), where abundance peaked during April and May.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataIn the middle estuary zone, subyearling abundance followed a bimodal distribution, with peaks in May and July and maximum abundance about half of that in the tidal freshwater zone.
“In the middle estuary zone, abundance followed a bimodal distribution, with peaks occurring in May and July and maximum abundance levels about half of those seen in the tidal freshwater zone.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataDays postrelease ranged from 4 to 52, and migration rates ranged from 2 to 26 km/d; most tagged yearling Chinook migrated at rates less than 10 km/d.
“Days postrelease ranged from 4 to 52, and migration rates ranged from 2 to 26 km/d; however, most tagged yearling Chinook migrated at rates less than 10 km/d.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataYearling fish were generally present during March-May, while subyearlings were present year-round.
“Yearling fish were generally present during March-May, while subyearlings were present year-round.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataMean monthly catches differed between zones, and CPUE was significantly higher in the tidal freshwater zone in all seasons except winter, when catches were low and variable in all zones.
“Mean monthly catches differed between zones (Figure 3), and CPUE was significantly higher in the tidal freshwater zone in all seasons except winter, when catches were low and variable in all zones (Figure 4C).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataAt the tidal freshwater sites, fry in the size range of 40-60 mm were abundant from March to July and were present as late as September.
“At the tidal freshwater sites, fry in the size range of 40-60 mm were abundant from March to July and were present as late as September.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThree tagged fish originated from hatcheries outside the Columbia River basin: two from the Nemah River in Willapa Bay, Washington, and one from the Quinault River on the Washington coast.
“For example, three fish originated from hatcheries outside the Columbia River basin: two were from the Nemah River in Willapa Bay, Washington, and one was from the Quinault River on the Washington coast.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataWest Cascade tributary spring stock and, to a lesser extent, Willamette River spring stock fry were present in both winter and spring.
“The West Cascade tributary spring stock and, to a lesser extent, the Willamette River spring stock fry were present in both winter and spring.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataNo size differences were found among the three zones in winter, mainly due to high variance.
“No size differences were found among the three zones in winter, mainly due to high variance (Figure 5C).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataSixty-eight percent of subyearlings had been migrating for <30 d, 21% between 30 and 60 d, and 11% for >60 d.
“Sixty-eight percent of subyearlings had been migrating for <30 d, 21% between 30 and 60 d, and 11% for >60 d.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataTests for differences in CPUE and for size grouped by zone and season indicated significant main effects and interaction terms (ANOVA; both P < 0.001).
“Tests for differences in CPUE and for size grouped by zone and season indicated significant main effects and interaction terms (ANOVA; both P < 0.001).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataOf the yearling Chinook salmon sampled, 87% were spring-run stocks, with 46% from West Cascade tributaries, 37% from the Willamette River, 3% from the Snake River, and 1% from the mid-Columbia River.
“Of these, 87% were spring-run stocks, with 46% from West Cascade tributaries, 37% from the Willamette River, 3% from the Snake River, and 1% from the mid-Columbia River.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Findingown dataMost marks were adipose fin clips.
“Most marks were adipose fin clips.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThe predominant species and life history types utilizing the monitored sites were subyearling Chinook and chum salmon.
“The predominant species and life history types utilizing the monitored sites were subyearling Chinook and chum salmon.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataFry comprised a high percentage of the catch at most sites from January through April; the proportion of fry diminished at lower and middle estuary sites after April, while remaining relatively high in the tidal freshwater zone until August.
“Fry comprised a high percentage of the catch at most sites from January through April; the proportion of fry diminished at lower and middle estuary sites after April, while remaining relatively high in the tidal freshwater zone until August (Figure 7).”
Quote in the paperSubstantial claimMay combine two claims.
FindingcitationThe chum population was composed almost entirely of fry-sized animals and was most prevalent in estuarine sites over a contracted migration period during March-May.
“The chum population was composed almost entirely of fry-sized animals and was most prevalent in estuarine sites over a contracted migration period during March-May (Roegner et al. 2008).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Roegner et al. 2008
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
May combine two claims.
Findingown dataThe contemporary fry threshold in the tidal freshwater zone occurs in late April, whereas Dawley et al. (1985) found mean size exceeded 60 mm by March in most years.
“Dawley et al. (1985) found the mean size of Chinook subyearling salmon exceeded 60 mm by March of most years in the tidal freshwater zone, whereas regression statistics indicate the contemporary fry threshold in the tidal freshwater zone occurs in late April (Figure 6).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Dawley et al. (1985)
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
May combine two claims.
Findingown data11 of the 13 Columbia River stock groups were represented among the samples collected; CWT data indicate relatively long migration times for both subyearling and yearling fish and show a protracted residency for a portion of the salmon population.
“However, 11 of the 13 Columbia River stock groups were also represented among the samples collected; moreover, CWT data indicate relatively long migration times for both subyearling and yearling fish and show a protracted residency for a portion of the salmon population.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataAnalysis of release groups provided evidence of both schooling and wide spatial dispersion, along with variations in migration rate within and between groups.
“Analysis of release groups provided evidence of both schooling and wide spatial dispersion, along with variations in migration rate within and between groups (Table 4).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataCoded wire tags confirmed genetic source data, which showed that the fingerlings found in shallow-water habitat were primarily from a variety of lower-river hatchery stocks.
“Coded wire tags confirmed genetic source data, which showed that the fingerlings found in shallow-water habitat were primarily from a variety of lower-river hatchery stocks (Table 3; Figure 12).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataYearling abundance was concentrated during March and April, although individual yearling fish were captured at all landscape zones outside these main migration periods.
“Yearling abundance was concentrated during March and April, although individual yearling fish were captured at all landscape zones outside these main migration periods.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataDuring summer-fall (July-October), the proportion of Spring Creek group fingerlings declined to less than 10% in all regions and West Cascade tributary fall stocks dominated with proportional abundances of 83, 62, and 52% in the tidal freshwater, middle estuary, and lower estuary zones.
“However, during summer-fall (July-October), the proportion of Spring Creek group fingerlings declined to less than 10% in all regions and West Cascade tributary fall stocks dominated with respective proportional abundances of 83, 62, and 52% in the tidal freshwater, middle estuary, and lower estuary zones.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataRelatively few yearling Chinook salmon were sampled, and the genetic stock composition estimate was derived from 36 individuals.
“Relatively few yearling Chinook salmon were sampled in our study, and the genetic stock composition estimate was derived from 36 individuals (Figure 8).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataSummer and fall samples were dominated by the West Cascade tributary fall stock group and included increasing proportions of Upper Columbia summer-fall juveniles, particularly in the lower estuary (20% of fingerlings).
“Summer and fall samples were dominated by the West Cascade tributary fall stock group and included increasing proportions of Upper Columbia summer-fall juveniles, particularly in the lower estuary (20% of fingerlings).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataOverall, mean ± SE catches trended from 46.3 ± 7.3 in the tidal freshwater zone to 10.8 ± 2.6 in the lower estuary zone, with significantly lower catches near the mouth of the estuary.
“Overall, mean ± SE catches trended from 46.3 ± 7.3 in the tidal freshwater zone to 10.8 ± 2.6 in the lower estuary zone, with significantly lower catches near the mouth of the estuary (Figure 4A).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThere was no relation between migration rate and either size at capture or release location.
“There was no relation between migration rate and either size at capture or release location (Figure 12).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataIn our study, CWT-derived migration rates ranged from 2.4 to 25.8 km/d, with postrelease periods up to 52 d.
“In our study, CWT-derived migration rates ranged from 2.4 to 25.8 km/d, with postrelease periods up to 52 d (Figure 12).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataUpper Clifton Channel had the highest overall percent fry abundance (42.2%) and exhibited high mean monthly percentages from January through July.
“Upper Clifton Channel had the highest overall percent fry abundance (42.2%) and exhibited high mean monthly percentages from January through July”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn all samples across all seasons and zones (2002-2006), the Willamette River spring genetic stock group was the most abundant, comprising 50.8% of 2,138 Chinook salmon.
“All 2,138 0.508 0.028 0.013 0.338 0.003 0.000 0.062 0.008 0.001 0.025 0.014”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataFrom 2002 to 2006, 8.0 ± 2.0% of subyearling Chinook salmon were adipose fin clipped, but during 2007-2008 this rate increased to 53.2 ± 13.7% (range, 30.1-65.9%).
“From 2002 to 2006, 8.0 ± 2.0% of subyearling Chinook salmon were adipose fin clipped (Table 2), but during 2007-2008 this rate increased to 53.2 ± 13.7% (range, 30.1-65.9%).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataMigration rates ranged from <1 to 29 km/d, and many fish from below Bonneville Dam resided for an extended period in the lower river and/or brackish estuary.
“Migration rates ranged from <1 to 29 km/d, and many fish from below Bonneville Dam resided for an extended period in the lower river and/or brackish estuary.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe Spring Creek group fall fish migrated through the system early in the year, and by summer and fall few of this stock were present at shallow-water sampling sites.
“The Spring Creek group fall fish migrated through the system early in the year, and by summer and fall few of this stock were present at our shallow-water sampling sites.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn spring, catches increased in all zones, but there was a significant gradient of decreasing catch with downstream location.
“In spring, catches increased in all zones, but there was a significant gradient of decreasing catch with downstream location.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataFry were present at all sites, and recently emerged individuals (31-45 mm) appeared simultaneously throughout the LCRE in early spring.
“Fry were present at all sites, and recently emerged individuals (31-45 mm) appeared simultaneously throughout the LCRE in early spring.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataRegression coefficients implied that size at capture in tidal freshwater regions was half that in the lower estuary zone and differed as much as 40 mm by late summer.
“Regression coefficients implied that size at capture in tidal freshwater regions was half that in the lower estuary zone (Figure 6) and differed as much as 40 mm by late summer.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataMost Chinook salmon fry used in the genetic analysis were sampled from tidal freshwater sites and were identified as belonging to the West Cascade tributary fall stock group in both the spring (78%) and summer-fall (97%) sampling periods.
“Most Chinook salmon fry used in the genetic analysis were sampled from tidal freshwater sites and were identified as belonging to the West Cascade tributary fall stock group in both the spring (78%) and summer-fall (97%) sampling periods (Figures 9, 10).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn the middle estuary, yearling abundance was 2.5% of the salmonid population and was concentrated in late March to early May.
“In the middle estuary, yearling abundance (2.5% of the salmonid population) was concentrated in late March to early May.”
Quote in the paperNot a substantial claimThe quote only partly states this claim.
Findingown dataAmong spring fingerlings in tidal freshwater, the West Cascade tributary spring genetic stock group was the most abundant, comprising 50.9% of 318 fish.
“TFW 318 0.445 0.006 0.000 0.509 0.003 0.000 0.034 0.000 0.000 0.003 0.000”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Findingnone givenAt all sites, high variance was evident in the monthly averages.
“At all sites, high variance was evident in the monthly averages.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationThe early 1914-1916 investigation indicated that a variety of subyearling migration patterns were present.
“This early investigation indicated that a variety of subyearling migration patterns were present.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Rich 1920
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationThe abundance of salmonid populations in the Columbia River basin has declined through the past 150 years due in part to alterations of salmon habitat, including degradation and loss of spawning and rearing areas, alteration of river flows, and impediments to juvenile and adult migrations.
“The abundance of salmonid populations in the Columbia River basin has declined through the past 150 years due in part to alterations of salmon habitat (Myers et al. 2006), including the degradation and loss of spawning and rearing areas, alteration of river flows from historical patterns, and impediments to juvenile and adult migrations (Sherwood et al. 1990;Sheer and Steel 2006).”
Quote in the paperNot a substantial claim0 of 3 sources checkedProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationReimers and Loeffel (1967) found differences in emergence rates, growth, and residency between the larger, colder rivers draining Mt. St. Helens and the smaller, warmer rivers draining Coast Range watersheds.
“Subsequently, Reimers and Loeffel (1967) found differences in emergence rates, growth, and residency between the larger, colder rivers draining Mt.St. Helens and the smaller, warmer rivers draining Coast Range watersheds.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Reimers and Loeffel (1967)
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationThe years 1934 to 1971 saw dam construction on the Columbia and Snake rivers and on many of their tributaries, which severely eliminated habitat and curtailed salmon migration patterns.
“The years 1934 to 1971 saw dam construction on the Columbia and Snake rivers and on many of their tributaries, which severely eliminated habitat and curtailed salmon migration patterns (Bottom et al. 2005b).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Bottom et al. 2005b
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationFrom 1966 to 1983, an extensive beach- and purse-seining effort documented the abundance, distribution, migration patterns, and postrelease survival of wild and hatchery-reared salmon and steelhead, including subyearling Chinook salmon.
“From 1966 to 1983, an extensive beach-and purse-seining effort documented the abundance, distribution, migration patterns, and postrelease survival of wild and hatchery-reared salmon and steelhead, including subyearling Chinook salmon”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites Durkin 1982 source
- cites Dawley et al. 1985
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- cites Dawley et al. 1986
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationSince that time, 13 Columbia River basin Pacific salmon and steelhead evolutionarily significant units have been listed as threatened or endangered under the U.S. Endangered Species Act.
“Since that time, 13 Columbia River basin Pacific salmon and steel-head evolutionarily significant units (ESUs) have been listed as threatened or endangered under the U.S. Endangered Species Act (Good et al. (2005), prompting changes to the way the Federal Columbia River Power System (FCRPS) has been operated and managed.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Good et al. (2005)
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Study design and conductown dataSites were sampled monthly from January 2002 through September 2007, although adverse weather prevented sampling on 25 of 460 (5.4%) sample dates, usually in November through February.
“Sites were sampled monthly from January 2002 through September 2007, although adverse weather prevented sampling on 25 of 460 (5.4%) sample dates, usually in November through February.”
Quote in the paperNot a substantial claimClassified as probably not a substantial claim.
Study design and conductcitationThe precision of the stock composition results was estimated by bootstrapping baseline and mixture data 100 times as implemented by ONCOR.
“The precision of the stock composition results was estimated by bootstrapping baseline and mixture data (100 times) as implemented by ONCOR (Kalinowski et al. 2007).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Kalinowski et al. 2007
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationEstuary restoration activities have expanded rapidly in recent years in an effort to help recover at-risk populations.
“Estuary restoration activities have expanded rapidly in recent years in an effort to help recover at-risk populations (LCREP 2011).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites LCREP 2011
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Rests on an assumption: Questions remain concerning which specific stocks of concern will benefit from estuary restoration efforts.
Probably not a substantial claim: may not pass S3 (load-bearing).
Premisenone givenRestoration of degraded wetlands intended to improve juvenile rearing opportunities is presently being implemented or planned in many regions of the LCRE.
“Restoration of degraded wetlands intended to improve juvenile rearing opportunities is presently being implemented or planned in many regions of the LCRE, yet questions remain concerning the benefits of these actions to specific stocks and life history types of salmon.”
Quote in the paperNot a substantial claim- Rests on an assumption: Questions remain concerning which specific stocks of concern will benefit from estuary restoration efforts.
May combine two claims.
Interpretationown dataTogether, abundance, size, and stock data support the premise that many small juvenile Chinook salmon reside and accumulate in shallow, tidal freshwater sites, with larger fish moving down into the estuary.
“Together, abundance, size, and stock data support the premise that many small juvenile Chinook salmon reside and accumulate in shallow, tidal freshwater sites, with larger fish moving down into the estuary.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataOur study confirmed that subyearling Chinook salmon were prevalent in shallow-water habitats of the LCRE and identified the life history types and genetic stocks expected to be among the primary beneficiaries of restoration activities along the lower-river migration route.
“Our study confirmed that subyearling Chinook salmon were prevalent in shallow-water habitats of the LCRE and identified the life history types and genetic stocks expected to be among the primary beneficiaries of restoration activities along the lower-river migration route.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
InterpretationreasoningBased on the above examples, one might expect that a fry migrant life history type continues to contribute to Chinook salmon spawner success in the Columbia River basin, especially to the lower-river populations.
“Based on the above examples, one might expect that a fry migrant life history type continues to contribute to Chinook salmon spawner success in the Columbia River basin, especially to the lower-river populations.”
Quote in the paperNot a substantial claimClassified as probably not a substantial claim.
Study design and conductreasoningData for the plots were restricted to assignments made with at least a probability of 0.90 relative to other groups.
“Data for the plots were restricted to assignments made with at least a probability of 0.90 relative to other groups.”
Quote in the paperSubstantial claimMay combine two claims.
InterpretationcitationFor the summer-fall period, the sources of these fish included cold rivers such as those draining Mt. St. Helens in Washington, where salmon would have later hatch times and reduced growth rates, and this could explain their small size late in the season.
“For the latter period, the sources of these fish included cold rivers such as those draining Mt.St. Helens in Washington, where salmon would have later hatch times and reduced growth rates (Reimers and Loeffel 1967;Brannon et al. 2004), and this could explain their small size late in the season.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites Reimers and Loeffel 1967
- cites Brannon et al. 2004 source
May combine two claims.
InterpretationcitationUp to 30% of the Chinook salmon measured in these shallow areas were fry, which the authors presume were mostly of natural origin and which have an affinity for shallow, low-velocity environments.
“Perhaps most significantly, up to 30% of the Chinook salmon measured in these shallow areas were fry, which we presume were mostly of natural origin and which have an affinity for shallow, low-velocity environments (Healey 1980(Healey , 1991)).”
Quote in the paperSubstantial claim0 of 2 sources checked- cites Healey 1980
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- cites Healey 1991
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
May combine two claims.
Interpretationown dataCoded wire tag information supported the findings from the genetic stock analysis and proved that there is wide variation in migration timing, rate, and duration within and among hatchery releases.
“Coded wire tag information supported the findings from the genetic stock analysis and proved that there is wide variation in migration timing, rate, and duration within and among hatchery releases.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenGenetic stock assignments for hatchery Chinook salmon were restricted to those with relative probabilities greater than 0.90.
“Genetic stock assignments with relative probabilities >0.90 are shown.”
Quote in the paperNot a substantial claimMay combine two claims.
Interpretationown dataThe remaining 70% of Chinook salmon were fingerlings and yearlings and probably predominantly of hatchery origin.
“Based on size at capture and adipose fin clips, 30% of the Chinook salmon were fry and likely of natural origin, while the remaining 70% were fingerlings and yearlings and probably predominantly of hatchery origin.”
Quote in the paperSubstantial claim- Rests on an assumption: Marks or tags, especially adipose fin clips, indicate probable hatchery origin.
May combine two claims.
Study design and conductown dataPower analyses conducted on the baseline data indicated that excluding individuals with lower probability assignments, approximately 25% of samples, improves overall assignment accuracy and results in only small changes in the stock composition estimates.
“Power analyses conducted on the baseline data indicated that excluding individuals with lower probability assignments (approximately 25% of our samples) improves overall assignment accuracy and results in only small changes in the stock composition estimates.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataWhile most Rogue River fish were sampled in summer and at sites along the Oregon shoreline and many were marked, others captured in spring prior to the summer releases suggest some contribution from natural production sources.
“While most Rogue River fish were sampled in summer and at sites along the Oregon shoreline and many were marked (indicating that they originated in the enhancement program), others captured in spring prior to the summer releases suggest some contribution from natural production sources.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenA much larger marking effort was employed for subyearling Chinook salmon after 2006.
“A much larger marking effort was employed for subyearling fish after 2006.”
Quote in the paperNot a substantial claimMay combine two claims.
Interpretationnone givenThe lower Columbia River and estuary serve as both a migration corridor to the ocean and, for particular stocks, an important habitat for juvenile rearing.
“The lower Columbia River and estuary serve as both a migration corridor to the ocean and, for particular stocks, an important habitat for juvenile rearing.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataBased on size at capture, genetics, marks, and coded wire tags, the majority of these fish were hatchery reared, subyearling, fall-run salmon derived from lower-river sources.
“Based on size at capture, genetics, marks, and coded wire tags, the majority of these fish were hatchery reared, subyearling, fall-run salmon derived from lower-river sources.”
Quote in the paperSubstantial claim- Rests on an assumption: Marks or tags, especially adipose fin clips, indicate probable hatchery origin.
May combine two claims.
Interpretationown dataContemporary abundance patterns appear to have shifted to an earlier peak migration in the tidal freshwater zone, while there is a suggestion of a later migration peak in the lower estuary zone at present.
“This comparison indicated that contemporary abundance patterns appear to have shifted to an earlier peak migration in the tidal freshwater zone, while there is a suggestion of a later migration peak in the lower estuary zone at present (Figure 3).”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductown dataThe 95% confidence intervals for genetic stock composition estimates were derived from 100 bootstrap resamplings of the baseline and mixed-stock genotypes.
“The range below each estimate is the 95% confidence interval derived from 100 bootstrap resamplings of the baseline and mixed-stock genotypes.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationRogue River fish are known to have become naturalized in the Grays River and have perhaps naturalized elsewhere in the Columbia River basin.
“Rogue River fish are known to have become naturalized in the Grays River, a tributary that enters along the Washington shore of the upper estuary (Roegner et al. 2010) and have perhaps naturalized elsewhere in the Columbia River basin.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Roegner et al. 2010 source
May combine two claims.
InterpretationreasoningThese seasonal shifts in the proportions of West Cascade tributary fall and Spring Creek group fry were similar to those observed for fingerlings, suggesting that the pattern is not simply a result of hatchery operations but rather reflects natural differences between the stocks in migration and habitat use.
“These seasonal shifts in the proportions of West Cascade tributary fall and Spring Creek group fry were similar to those observed for fingerlings, suggesting that the pattern is not simply a result of hatchery operations but rather reflects natural differences between the stocks in migration and habitat use.”
Quote in the paperSubstantial claimMay combine two claims.
InterpretationcitationJudging by the high proportion of adipose-fin-clipped fish found in our study, most yearling fish originated in hatcheries, and the observed abundance patterns were likely due to hatchery releases and smolt transportation practices.
“Judging by the high proportion of adipose-fin-clipped fish found in our study (Table 2), most yearling fish originated in hatcheries, and the observed abundance patterns were likely due to hatchery releases and smolt transportation practices (Ledgerwood et al. 2005).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Ledgerwood et al. 2005
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Rests on an assumption: Marks or tags, especially adipose fin clips, indicate probable hatchery origin.
May combine two claims.
Interpretationown dataWhile the majority of yearling Chinook salmon move quickly through deep areas of the river inaccessible to beach seines, a proportion of yearlings have a more protracted migration accessing shallow, nearshore habitats and do not travel immediately to the sea.
“Thus, we concluded that while the majority of yearling Chinook salmon move quickly through deep areas of the river inaccessible to beach seines, a proportion of yearlings have a more protracted migration accessing shallow, nearshore habitats and do not travel immediately to the sea.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing), S4 (based).
Interpretationnone givenThese fry are likely naturally spawned salmon.
“These are likely naturally spawned salmon.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing), S4 (based).
InterpretationcitationThis may be a consequence of the higher fry densities found at the semiprotected site at upper Clifton Channel than at the more open area at Jones Beach sampled by Dawley et al. (1985).
“This may be a consequence of the higher fry densities found at the semiprotected site at upper Clifton Channel than at the more open area at Jones Beach sampled by Dawley et al. (1985).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Dawley et al. (1985)
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
May combine two claims.
Interpretationown dataBased on size at capture and adipose fin clips, 30% of the Chinook salmon were fry and likely of natural origin.
“Based on size at capture and adipose fin clips, 30% of the Chinook salmon were fry and likely of natural origin, while the remaining 70% were fingerlings and yearlings and probably predominantly of hatchery origin.”
Quote in the paperSubstantial claim- Rests on an assumption: Marks or tags, especially adipose fin clips, indicate probable hatchery origin.
May combine two claims.
Interpretationown dataThese catches agreed with the genetic data and demonstrated that juveniles from coastal fall stocks can migrate into the Columbia River.
“These catches again agreed with the genetic data and demonstrated that juveniles from coastal fall stocks can migrate into the Columbia River.”
Quote in the paperSubstantial claim
The authors state this as an assumption.
The majority of fry-sized Chinook salmon captured were naturally spawned.
“We assume from hatchery release procedures, which discourage the”
The paper relies on this without support.
Questions remain concerning which specific stocks of concern will benefit from estuary restoration efforts.
“Restoration of degraded wetlands intended to improve juvenile rearing opportunities is presently being implemented or planned in many regions of the LCRE, yet questions remain concerning the benefits of these actions to specific stocks and life history types of salmon.”
“However, it is not clear which specific stocks of concern will benefit from these restoration efforts.”
The paper relies on this without support.
Columbia River hatchery release procedures discourage the release of slower-growing fry.
“We assume from hatchery release procedures, which discourage the”
The paper relies on this without support.
Marks or tags, especially adipose fin clips, indicate probable hatchery origin.
“Overall, from 2002 to 2007, 16.1% of the Chinook salmon we examined were marked or tagged to indicate a probable hatchery origin.”
“Judging by the high proportion of adipose-fin-clipped fish found in our study (Table 2), most yearling fish originated in hatcheries, and the observed abundance patterns were likely due to hatchery releases and smolt transportation practices (Ledgerwood et al. 2005).”
The paper relies on this without support.
Genetic stock assignments with probability of 0.90 or greater correctly identify the stock of origin.
“Although our sample size was small, 26 of 30 genetic stock estimates with assignment probabilities of 0.90 or greater agreed with the origins determined using CWTs (Table 3).”
“The data for the plots were restricted to individual fish stock assignments made with at least 0.90 probability.”
The paper relies on this without support.
CWT recoveries are representative of the stock composition and migration behavior of the tagged populations.
“The release information from the tag codes reflected stock compositions similar to those obtained through genetic analysis.”
“Coded wire tags confirmed genetic source data, which showed that the fingerlings found in shallow-water habitat were primarily from a variety of lower-river hatchery stocks (Table 3; Figure 12).”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Wetland prey presence in main channel diets highlights the importance of tidal wetlands as prey sources to the varying Chinook life history patterns in the LCRE.
“Wetland prey presence in main channel diets highlights the importance of tidal wetlands as prey sources to the varying Chinook life history patterns in the LCRE [20]”
From Subyearling Chinook salmon diets in Lower Columbia River estuarine habitats (2025) · cites this paper as [20]
The Consequences for Restoration section (page unavailable) says that wetlands and other shallow-water habitats are used by salmon of varied life history types and that preserving those habitats is important. It does not report wetland prey in main-channel diets or establish tidal wetlands as prey sources; the Methods describe sampling fish distribution rather than diets. (LLM, conf=0.82)
Experimental — accuracy not yet measuredThe stock-specific density of juvenile salmon in restoring wetland habitats is a negative function of the distance of the natal stream from the wetland, with proportionally greater representation from local stocks than distant stocks in LCRE wetlands.
“there is proportionally greater representation from local stocks than more distant stocks in LCRE wetlands (Roegner et al. 2010, 2012, Teel et al. 2014).”
From Evidence‐based evaluation of the cumulative effects of ecosystem restoration (2016) · cites this paper as Roegner et al. 2012
Split into 2 atoms — 0 confirmed, 2 partially supported, 0 disputed, 0 misattributed, 0 unverifiable. Expand the claim to see per-atom verdicts.
Experimental — accuracy not yet measured
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
Each contradiction between two passages listed here was confirmed by an independent check.
Summer-fall estuary zone figures are reversed in Table A.2
MajorThe text assigns 62% West Cascade tributary fall fingerlings to the middle estuary and 52% to the lower estuary. Table A.2 instead labels the row with 0.616 as lower estuary and the row with 0.516 as middle estuary; the upper Columbia and Rogue River figures show the same reversal.
“West Cascade tributary fall stocks dominated with respective proportional abundances of 83, 62, and 52% in the tidal freshwater, middle estuary, and lower estuary zones.”
“LE 290 0.616 0.013 0.004 0.080 0.006 0.000 0.107 0.008 0.000 0.109 0.057”
A stock estimate lies outside its reported confidence interval
MinorIn the all-samples row of Table A.2, the Spring Creek group fall estimate is 0.338, but its reported 95% confidence interval ends at 0.333.
“All 2,138 0.508 0.028 0.013 0.338 0.003 0.000 0.062 0.008 0.001 0.025 0.014”
“0.468-0.5510.028-0.0660.008-0.0190.259-0.333”
The all-samples genetic total excludes the separately listed yearlings
MinorThe text says genetic data from 2,174 fish were analyzed, whereas Table A.2 labels 2,138 as "All samples." The difference is exactly the table's 36 yearlings, indicating that the purported all-samples row excludes them.
“Genetic data from 2,174 yearling, fingerling, and fry Chinook salmon collected from 2002 to 2006 were used to estimate genetic stock composition (Table A.2).”
“All samples, all seasons All 2,138”
Cites
Detecting immigration by using multilocus genotypes
Rannala, B. H., & Mountain, J. L. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.17.9197 · Cited by 2,212 · see citing works
(1992) · Reviews in Fish Biology and Fisheries · doi:10.1007/bf00043527 · Cited by 973 · see citing works
(1982) · Elsevier eBooks · doi:10.1016/c2013-0-10960-9 · Cited by 510 · see citing works
LIFE-HISTORY DIVERGENCE IN CHINOOK SALMON: HISTORIC CONTINGENCY AND PARALLEL EVOLUTION
Waples, R. S., Teel, D. J., Myers, J. M., & Marshall, A. R. (2004) · Evolution · doi:10.1111/j.0014-3820.2004.tb01654.x · Cited by 264 · cited 1× · see citing works
“Regional genetic stock groupings were based on the stock identification analysis described by Seeb et al. (2007) and on previous genetic studies of Chinook salmon in the Columbia River basin (e.g., Waples et al. 2004; Myers et al. 2006; Roegner et al. 2010).”
MethodSelf-citationSalmon at River's End: The Role of the Estuary in the Decline and Recovery of Columbia River salmon
Bottom, D. L., Simenstad, C. A., Burke, J. L., Baptista, A. M., Jay, D. A., Jone, K. K., Casillas, E., & Schiewe, M. H. (2005) · PDXScholar (Portland State University) · Cited by 225 · see citing works
Self-citation(2005) · Cited by 218 · see citing works
Circulation, density distribution and neap-spring transitions in the Columbia River Estuary
Jay, D. A., & Smith, J. D. (1990) · Progress In Oceanography · doi:10.1016/0079-6611(90)90004-l · Cited by 216 · see citing works
Historical changes in the Columbia River Estuary
Sherwood, C. R., Jay, D. A., Bradford Harvey, R., Hamilton, P., & Simenstad, C. A. (1990) · Progress in Oceanography · doi:10.1016/0079-6611(90)90011-p · Cited by 214 · cited 2× · see citing works
“2006), including the degradation and loss of spawning and rearing areas, alteration of river flows from historical patterns, and impediments to juvenile and adult migrations (Sherwood et al. 1990; Sheer and Steel 2006).”
BackgroundSheer, M. B., & Steel, E. A. (2006) · Transactions of the American Fisheries Society · doi:10.1577/t05-221.1 · Cited by 209 · cited 2× · see citing works
“…the past 150 years due in part to alterations of salmon habitat (Myers et al. 2006), including the degradation and loss of spawning and rearing areas, alteration of river flows from historical patterns, and impediments to juvenile and adult migrations (Sherwood et al. 1990; Sheer and Steel 2006).”
Development of a Standardized DNA Database for Chinook Salmon
Seeb, L. W., Antonovich, A., Banks, M. A., Beacham, T. D., Bellinger, M. R., Blankenship, S. M., Campbell, M. R., DeCovich, N., Garza, J. C., Guthrie, C. M., et al. (2007) · Fisheries · doi:10.1577/1548-8446(2007)32[540:doasdd]2.0.co;2 · Cited by 204 · see citing works
Self-citationPopulation structure of Columbia River basin Chinook salmon and steelhead trout
BRANNON, E. L., POWELL, M. S., QUINN, T. P., & TALBOT, A. (2004) · Reviews in Fisheries Science · doi:10.1080/10641260490280313 · Cited by 183 · cited 2× · see citing works
“Helens in Washington, where salmon would have later hatch times and reduced growth rates (Reimers and Loeffel 1967; Brannon et al. 2004), and this could explain their small size late in the season.”
BackgroundJUVENILE PACIFIC SALMON IN ESTUARIES: THE LIFE SUPPORT SYSTEM
Healey, M. C. (1982) · Estuarine Comparisons · doi:10.1016/b978-0-12-404070-0.50025-9 · Cited by 176 · cited 3× · see citing works
“…in other Pacific Northwest rivers (e.g., Reimers 1973; Healey 1980; Myers and Horton 1980; Levy and Northcote 1982; Bottom et al. 2005a), and Healey (1982) suggests that Chinook salmon are the most estuary dependent of salmon species, due in part to this wide variation in their life history…”
The length of residence of juvenile Fall Chinook salmon in Sixes River, Oregon
Reimers, P. E. (1971) · Cited by 172 · see citing works
Juvenile Salmon Residency in a Marsh Area of the Fraser River Estuary
Levy, D. A., & Northcote, T. G. (1982) · Canadian Journal of Fisheries and Aquatic Sciences · doi:10.1139/f82-038 · Cited by 165 · see citing works
Waples, R. S., Beechie, T., & Pess, G. R. (2009) · Ecology and Society · doi:10.5751/es-02626-140103 · Cited by 163 · cited 2× · see citing works
“The ability of many salmon stocks to express diverse life histories during the juvenile phase is thought to be an important adaptive mechanism for mitigating natural environmental variability (Healey 1991; Waples et al. 2009).”
BackgroundStatus review of chum salmon from Washington, Oregon, and California
Weitkamp, L. A., Wainwright, T. C., Bryant, G. J., Milner, G. B., Teel, D. J., Kope, R. G., & Waples, R. S. (1995) · Cited by 157 · see citing works
Self-citationImpacts of Columbia River discharge on salmonid habitat: 2. Changes in shallow‐water habitat
Kukulka, T., & Jay, D. A. (2003) · Journal of Geophysical Research Atmospheres · doi:10.1029/2003jc001829 · Cited by 134 · see citing works
Patterns of Chinook salmon migration and residency in the Salmon River estuary (Oregon)
Bottom, D. L., Jones, K. K., Cornwell, T. J., Gray, A., & Simenstad, C. A. (2005) · Estuarine, Coastal and Shelf Science · doi:10.1016/j.ecss.2005.02.008 · Cited by 130 · cited 16× · see citing works
“…of protracted use of shallow-water habitats by a variety of salmon species, stocks, and life history stages (Reimers 1973; Healey 1980, 1982; Levy and Northcote 1982; Levings et al. 1986, 1991; Levings 1994; Magnusson and Hilborn 2003; Bottom et al. 2005a; Hering et al. 2010; Roegner et al. 2010).”
BackgroundInfluentialSelf-citationMagnusson, A., & Hilborn, R. (2003) · Estuaries · doi:10.1007/bf02803366 · Cited by 129 · cited 1× · see citing works
“…of protracted use of shallow-water habitats by a variety of salmon species, stocks, and life history stages (Reimers 1973; Healey 1980, 1982; Levy and Northcote 1982; Levings et al. 1986, 1991; Levings 1994; Magnusson and Hilborn 2003; Bottom et al. 2005a; Hering et al. 2010; Roegner et al. 2010).”
BackgroundMiller, J. A., Gray, A., & Merz, J. E. (2010) · Marine Ecology Progress Series · doi:10.3354/meps08613 · Cited by 103 · cited 1× · see citing works
“While the ultimate contribution of fry migrants to adult returns in the Columbia River basin is unknown, Miller et al. (2010) found that 20% of the adult Chinook salmon originating from streams in the Central Valley of California had migrated to saline waters as juveniles at less than 55 mm.…”
BackgroundColumbia river estuary studies: An introduction to the estuary, a brief history, and prior studies
Simenstad, C. A., Small, L. F., David McIntire, C., Jay, D. A., & Sherwood, C. (1990) · Progress in Oceanography · doi:10.1016/0079-6611(90)90002-j · Cited by 84 · cited 2× · see citing works
“These temporal divisions reflect seasonal variability in water temperature, river flow, and expected salmon abundance patterns (Simenstad et al. 1990); patterns of interannual variation are summarized in Bottom et al.”
BackgroundLevings, C. D., McAllister, C. D., & Chang, B. D. (1986) · Canadian Journal of Fisheries and Aquatic Sciences · doi:10.1139/f86-172 · Cited by 79 · cited 1× · see citing works
“…of protracted use of shallow-water habitats by a variety of salmon species, stocks, and life history stages (Reimers 1973; Healey 1980, 1982; Levy and Northcote 1982; Levings et al. 1986, 1991; Levings 1994; Magnusson and Hilborn 2003; Bottom et al. 2005a; Hering et al. 2010; Roegner et al. 2010).”
BackgroundBottom, D. L., & Jones, K. K. (1990) · Progress in Oceanography · doi:10.1016/0079-6611(90)90009-q · Cited by 78 · see citing works
Self-citationMacFarlane, R. B., & Norton, E. C. (2002) · Digital Library Of The Commons Repository (Indiana University) · Cited by 68 · see citing works
Volk, E. C., Bottom, D. L., Jones, K. K., & Simenstad, C. A. (2010) · Transactions of the American Fisheries Society · doi:10.1577/t08-163.1 · Cited by 62 · cited 1× · see citing works
“Volk et al. (2010) found a wide dispersal of fry into estuarine marshes of the Salmon River in spring, and many fish resided in saline waters for weeks or months.”
Self-citationMurray, C. B., & Rosenau, M. L. (1989) · Transactions of the American Fisheries Society · doi:10.1577/1548-8659(1989)118 · Cited by 62 · see citing works
Beeman, J. W., & Maule, A. G. (2006) · Transactions of the American Fisheries Society · doi:10.1577/t05-193.1 · Cited by 61 · see citing works
Roegner, G. C., Dawley, E. W., Russell, M., Whiting, A., & Teel, D. J. (2010) · Transactions of the American Fisheries Society · doi:10.1577/t09-082.1 · Cited by 57 · cited 10× · see citing works
“In many estuaries, salmon migrating along main-stem sections enter and utilize nonnatal, off-channel, and low-velocity sloughs and wetlands (Murray and Rosenau 1989; Scrivener et al. 1994; Bradford et al. 2001; Baker 2008; Teel et al. 2009; Roegner et al. 2010).”
BackgroundMethodInfluentialSelf-citation(2006) · Cited by 57 · see citing works
Self-citationFisher, J., & Pearcy, W. (1996) · Oceanographic Literature Review · doi:10.1016/0967-0653(96)84288-8 · Cited by 51
Tiffan, K. F., Kock, T. J., Haskell, C. A., Connor, W. P., & Steinhorst, R. K. (2009) · Transactions of the American Fisheries Society · doi:10.1577/t08-051.1 · Cited by 50 · cited 1× · see citing works
“Beeman and Maule (2006) and Tiffan et al. (2009) documented that radio-tagged yearlings moved more quickly in unimpounded sections of the Snake River (63–107 km/d) than in reservoirs (37–39 km/d).”
BackgroundBottom, D. L., Baptista, A., Burke, J., Campbell, L., Casillas, E., Hinton, S., Jay, D. A., Lott, M. A., McCabe, G., & McNatt, R. (2011) · doi:10.21236/ada581333 · Cited by 50 · cited 5× · see citing works
“For nonsalmonids, we measured and released a representative sample of up to 30 individuals of each species, and the remaining nonsalmonids were counted and released (summary in Roegner et al. 2008).”
BackgroundMethodInfluentialSelf-citationExamining Genetic Lineages of Chinook Salmon in the Columbia River Basin
Narum, S. R., Hess, J. E., & Matala, A. P. (2010) · Transactions of the American Fisheries Society · doi:10.1577/t09-150.1 · Cited by 48 · see citing works
Bradford, M. J., Grout, J. A., & Moodie, S. M. (2001) · Canadian Journal of Zoology · doi:10.1139/cjz-79-11-2043 · Cited by 45 · see citing works
Hering, D. K., Bottom, D. L., Prentice, E. F., et al. (2010) · Canadian Journal of Fisheries and Aquatic Sciences · doi:10.1139/f10-003 · Cited by 43 · cited 2× · see citing works
“…of protracted use of shallow-water habitats by a variety of salmon species, stocks, and life history stages (Reimers 1973; Healey 1980, 1982; Levy and Northcote 1982; Levings et al. 1986, 1991; Levings 1994; Magnusson and Hilborn 2003; Bottom et al. 2005a; Hering et al. 2010; Roegner et al. 2010).”
BackgroundSelf-citationLevings, C. D., Conlin, K., & Raymond, B. G. (1991) · Marine Pollution Bulletin · doi:10.1016/0025-326x(91)90440-4 · Cited by 41 · cited 1× · see citing works
“…of protracted use of shallow-water habitats by a variety of salmon species, stocks, and life history stages (Reimers 1973; Healey 1980, 1982; Levy and Northcote 1982; Levings et al. 1986, 1991; Levings 1994; Magnusson and Hilborn 2003; Bottom et al. 2005a; Hering et al. 2010; Roegner et al. 2010).”
TEMPORAL USE OF AN OREGON ESTUARY BY HATCHERY AND WILD JUVENILE SALMON
Myers, K. W., & Horton, H. F. (1982) · Elsevier eBooks · doi:10.1016/b978-0-12-404070-0.50028-4 · Cited by 40 · see citing works
Scrivener, J. C., Brown, T. G., & Andersen, B. C. (1994) · Canadian Journal of Fisheries and Aquatic Sciences · doi:10.1139/f94-113 · Cited by 40 · cited 1× · see citing works
“In many estuaries, salmon migrating along main-stem sections enter and utilize nonnatal, off-channel, and low-velocity sloughs and wetlands (Murray and Rosenau 1989; Scrivener et al. 1994; Bradford et al. 2001; Baker 2008; Teel et al. 2009; Roegner et al. 2010).”
BackgroundFisher, J. P., & Pearcy, W. G. (1996) · Oceanographic literature review · Cited by 40 · see citing works
(1967) · Cited by 39 · see citing works
Roegner, G. C., Seaton, C., & Baptista, A. M. (2010) · Estuaries and Coasts · doi:10.1007/s12237-010-9340-z · Cited by 38 · cited 2× · see citing works
“that tidal, wind, and river flow generate widely varying salinities and temperatures in the estuary (Jay and Smith 1990; Roegner et al. 2011).”
BackgroundSelf-citationThe Ecology of Juvenile Salmon in the Northeast Pacific Ocean: Regional Comparisons
(2007) · American Fisheries Society eBooks · doi:10.47886/9781888569957.ch6 · Cited by 37 · see citing works
Teel, D. J., Baker, C., Kuligowski, D. R., Friesen, T. A., & Shields, B. (2009) · Transactions of the American Fisheries Society · doi:10.1577/t08-084.1 · Cited by 35 · cited 5× · see citing works
“In many estuaries, salmon migrating along main-stem sections enter and utilize nonnatal, off-channel, and low-velocity sloughs and wetlands (Murray and Rosenau 1989; Scrivener et al. 1994; Bradford et al. 2001; Baker 2008; Teel et al. 2009; Roegner et al. 2010).”
BackgroundMethodResultInfluentialSelf-citationFeeding behaviour of juvenile salmon and significance of habitat during estuary and early sea phase
Levings, C. D. (1994) · Cited by 35 · see citing works
Genetic Variation and Structure of Chinook Salmon Life History Types in the Snake River
Narum, S. R., Stephenson, J. J., & Campbell, M. R. (2007) · Transactions of the American Fisheries Society · doi:10.1577/t06-240.1 · Cited by 34 · see citing works
Dawley, E. M. (1986) · doi:10.2172/5294424 · Cited by 34 · cited 10× · see citing works
“In samples taken during 1977–1983, Dawley et al. (1986) found that yearling migration in the tidal freshwater reach at Jones Beach, Oregon (rkm 75), occurred from February through June, with a consistent peak during May, while the mean size of yearlings decreased with time.”
BackgroundResultInfluentialClemens, B. J., Clements, S. P., Karnowski, M. D., Jepsen, D. B., Gitelman, A. I., & Schreck, C. B. (2009) · Transactions of the American Fisheries Society · doi:10.1577/t07-090.1 · Cited by 31 · cited 2× · see citing works
“Most recent studies have concentrated on the migration and mortality patterns of larger salmon fingerlings and especially smolts that can be fitted with passive integrated transponder (PIT), acoustic, or radio tags (e.g., Collis et al. 2001; Ledgerwood et al. 2005; Clemens et al. 2009) in order to track the downstream…”
BackgroundMorris, J. P., Trudel, M. J., & Fisher, J. P. (2007) · Cited by 29 · see citing works
Bradford, M. J., Grout, J. A., & Moodie, S. (2001) · Canadian Journal of Zoology · doi:10.1139/z01-165 · Cited by 27
Bottom, D. L., Anderson, G., & Baptisa, A. (2008) · doi:10.2172/941582 · Cited by 24 · cited 3× · see citing works
“These temporal divisions reflect seasonal variability in water temperature, river flow, and expected salmon abundance patterns (Simenstad et al. 1990); patterns of interannual variation are summarized in Bottom et al. 2008 and Roegner et al. 2008.”
BackgroundSelf-citationDurkin, J. T. (1982) · Estuarine Comparisons · doi:10.1016/b978-0-12-404070-0.50027-2 · Cited by 19 · cited 1× · see citing works
“From 1966 to 1983, an extensive beach- and purse-seining effort documented the abundance, distribution, migration patterns, and postrelease survival of wild and hatchery-reared salmon and steelhead, including subyearling Chinook salmon (e.g., Durkin 1982; Dawley et al. 1985, 1986).”
(1986) · Research Exchange (Washington State University) · Cited by 15 · see citing works
Detection of PIT-Tagged Juvenile Salmonids in the Columbia River Estuary using a Pair-Trawl, 2013
Magie, R. J., Morris, M. S., Ledgerwood, R. D., et al. (2007) · Cited by 9 · see citing works
Sather, N. K., Johnson, G. E., Storch, A., Teel, D., Skalski, J. R., Jones, T. A., Dawley, E. M., Zimmerman, S. A., Borde, A. B., Mallette, C., et al. (2009) · doi:10.2172/962847 · Cited by 9 · see citing works
Self-citationSeasonal floodplain wetlands as fish habitat in Oregon and Washington
Baker, C. F. (2008) · Cited by 5 · see citing works
Sobocinski, K. L., Johnson, G. E., & Sather, N. K. (2008) · doi:10.2172/961989 · Cited by 5 · see citing works
Flagged first, then by citations
4 of the 61 references couldn’t be matched to a known paper.
Research works printed but not linked: 8
- Craig, 1946, An investigation of fish-maintenance problems in relation to the Willamette Valley project, U.S. Fish and Wildlife Service Special Scientific Report, 33, 74
- Healey, 1980, Utilization of the Nanaimo River estuary by juvenile Chinook salmon, Oncorhynchus tshawytscha, U.S. National Marine Fisheries Service Fishery Bulletin, 77, 653
- Ledgerwood, 2005, U.S. National Marine Fisheries Service, Report to the U.S. Army Corps of Engineers, Walla Walla District, Contract 56ABNF100030
- Milner, 1985, A genetic method of stock identification in mixed populations of Pacific salmon, Oncorhynchus spp, Marine Fisheries Review, 47, 1
- Rich, 1920, Early history and seaward migration of Chinook salmon in the Columbia and Sacramento rivers, U.S. Bureau of Fisheries Bulletin, 37, 2
- Sather, 2009, Annual Report to the Bonneville Power Administration
- Schluchter, 1977, Oregon Department of Fish and Wildlife, 77
- Thomas, 1983, Columbia River Estuary Study Taskforce
Cited by
Sorted by citations
Evidence‐based evaluation of the cumulative effects of ecosystem restoration
Diefenderfer, H. L., Johnson, G. E., Thom, R. M., Buenau, K. E., Weitkamp, L. A., Woodley, C. M., Borde, A. B., & Kropp, R. K. (2016) · Ecosphere · doi:10.1002/ecs2.1242 · Cited by 49 · see citing works
“…vegetative cover types (Jay et al. 2015); habitat use by juvenile salmon varies spatially v www.esajournals.org DIEFENDERFER ET AL. and temporally (Roegner et al. 2012, Teel et al. 2014); salmon population dynamics are subject to compounding effects from multiple sources in the river basin,…”
Impact of multiple stressors on juvenile fish in estuaries of the northeast Pacific
Toft, J. D., Munsch, S. H., Cordell, J. R., Siitari, K., Hare, V. C., Holycross, B. M., DeBruyckere, L. A., Greene, C. M., & Hughes, B. B. (2018) · Global Change Biology · doi:10.1111/gcb.14055 · Cited by 42 · see citing works
Weitkamp, L. A., Goulette, G. S., Hawkes, J. P., O’Malley, M., & Lipsky, C. A. (2014) · Reviews in Fish Biology and Fisheries · doi:10.1007/s11160-014-9345-y · Cited by 40 · see citing works
“This is particularly true in the Columbia River estuary where both the larger hatchery and wild individuals are relatively rare in shallow water habitats but are abundant in deep channels during April through June (Durkin 1982; McCabe et al. 1983; Dawley et al. 1986; Johnson et al. 2011; Roegner et al. 2012; Weitkamp…”
BackgroundInfluentialTeel, D. J., Burke, B. J., Kuligowski, D. R., Morgan, C. A., & Doornik, D. M. V. (2015) · Marine and Coastal Fisheries · doi:10.1080/19425120.2015.1045961 · Cited by 37 · see citing works
Self-citationClaiborne, A. M., Miller, J. A., Weitkamp, L. A., Teel, D. J., & Emmett, R. (2014) · Marine Ecology Progress Series · doi:10.3354/meps10963 · Cited by 30 · see citing works
“Several studies have demonstrated strong relationships between ocean conditions during the early marine phase and subsequent adult salmon survival (Mantua et al.1997, Peyronnet et al. 2008, Rupp et al. 2012, Burke et al. 2013).”
BackgroundSelf-citationTeel, D. J., Bottom, D. L., Hinton, S. A., Kuligowski, D. R., McCabe, G. T., McNatt, R., Roegner, G. C., Stamatiou, L. A., & Simenstad, C. A. (2014) · North American Journal of Fisheries Management · doi:10.1080/02755947.2014.901258 · Cited by 29 · see citing works
“A similarly diverse set of Chinook Salmon genetic stocks occupy marine-dominated shallow habitats lower in the estuary (Roegner et al. 2012).”
BackgroundMethodInfluentialSelf-citationAn expert panel process to evaluate habitat restoration actions in the Columbia River estuary
Krueger, K. L., Bottom, D. L., Hood, W. G., Johnson, G. E., Jones, K. K., & Thom, R. M. (2016) · Journal of Environmental Management · doi:10.1016/j.jenvman.2016.11.028 · Cited by 30 · see citing works
“Although downstream migration is concentrated in the spring for a wide diversity of stocks and life histories, it ranges from late winter into autumn (Bottom et al., 2005; Roegner et al., 2012; Teel et al., 2014).”
BackgroundSelf-citationEstuary ecosystem restoration: implementing and institutionalizing adaptive management
Ebberts, B. D., Zelinsky, B. D., Karnezis, J. P., Studebaker, C. A., Lopez‐Johnston, S., Creason, A. M., Krasnow, L., Johnson, G. E., & Thom, R. M. (2018) · Restoration Ecology · doi:10.1111/rec.12562 · Cited by 27 · see citing works
“For CEERP, this research has focused on uncertainties related to juvenile salmonid migration patterns (Harnish et al. 2012; Roegner et al. 2012), residence times (Johnson et al. 2015; McNatt et al. 2016), ecology (Bottom et al. 2011; Sather et al. 2016), responses to restoration (Roegner et al.…”
MethodCraig, B. E., Simenstad, C. A., & Bottom, D. L. (2014) · Journal of Fish Biology · doi:10.1111/jfb.12433 · Cited by 26 · see citing works
Self-citationMcNatt, R. A., Bottom, D. L., & Hinton, S. A. (2016) · Transactions of the American Fisheries Society · doi:10.1080/00028487.2016.1172509 · Cited by 23 · see citing works
Self-citationCampbell, L. A., Bottom, D. L., Volk, E. C., & Fleming, I. (2014) · Transactions of the American Fisheries Society · doi:10.1080/00028487.2014.963253 · Cited by 19 · see citing works
“We removed scales and otoliths from frozen samples of subyearling Chinook Salmon collected during the Columbia River estuary study (Roegner et al. 2012).”
BackgroundMethodSelf-citationJohnson, G. E., Ploskey, G. R., Sather, N. K., & Teel, D. J. (2015) · Canadian Journal of Fisheries and Aquatic Sciences · doi:10.1139/cjfas-2014-0085 · Cited by 20 · see citing works
Self-citationSather, N. K., Johnson, G. E., Teel, D. J., Storch, A. J., Skalski, J. R., & Cullinan, V. I. (2016) · Transactions of the American Fisheries Society · doi:10.1080/00028487.2016.1150878 · Cited by 19 · see citing works
Self-citationGenetic Mixture Analysis Supports Recalibration of the Fishery Regulation Assessment Model
Moran, P., Dazey, J., LaVoy, L., et al. (2018) · Fisheries · doi:10.1002/fsh.10017 · Cited by 15 · see citing works
Moran, P., Bromaghin, J. F., & Masuda, M. M. (2014) · PLoS ONE · doi:10.1371/journal.pone.0098470 · Cited by 14 · see citing works
“8 seemed a good compromise between assignment accuracy and sample size, which contribute to precision and accuracy in trait estimation (see also [10]).”
BackgroundRoegner, G. C., Weitkamp, L. A., & Teel, D. J. (2016) · Marine and Coastal Fisheries · doi:10.1080/19425120.2016.1227889 · Cited by 12 · see citing works
“Small, naturally produced juvenile subyearling Chinook Salmon that occupy shoreline habitats are primarily fall-run fish originating from lower-river sources (Table 4; Roegner et al. 2012; Teel et al. 2014; Sather et al. 2016).”
BackgroundMethodInfluentialSelf-citationGoertler, P. A. L., Scheuerell, M. D., Simenstad, C. A., & Bottom, D. L. (2016) · PLOS ONE · doi:10.1371/journal.pone.0162121 · Cited by 10 · see citing works
Self-citationRoegner, G. C., & Teel, D. J. (2014) · Transactions of the American Fisheries Society · doi:10.1080/00028487.2014.918055 · Cited by 11 · see citing works
“Chinook Salmon were consistently larger in estuarine habitats than in TFW habitats, an observation that was likely a consequence of growth during migration (Roegner et al. 2012).”
BackgroundMethodInfluentialSelf-citationClaxton, A., Jacobson, K. C., Bhuthimethee, M., Teel, D. J., & Bottom, D. (2013) · Hydrobiologia · doi:10.1007/s10750-013-1564-z · Cited by 10 · see citing works
“…salmon abundance peaks in the spring and early summer (Fresh et al., 2005), and stock composition is dominated by fall run (season of adult return to freshwater) juveniles originating from the Lower Columbia River Evolutionary Significant Unit (ESU) (Bottom et al., 2008; Roegner et al., 2012).”
BackgroundSelf-citationBeamer, E. M., Rice, C. A., Chamberlin, J. W., Henderson, R. A., Lomax, D. P., & Greene, C. M. (2024) · Transactions of the American Fisheries Society · doi:10.1002/tafs.10488 · Cited by 6 · see citing works
Seasonal Use of a Nonnatal Marine Basin by Juvenile Hatchery Chinook Salmon
Hayes, M. C., Hodgson, S., Ellings, C. S., Duval, W., & Rubin, S. P. (2019) · Marine and Coastal Fisheries · doi:10.1002/mcf2.10098 · Cited by 5 · see citing works
Application of diversity indices to quantify early life-history diversity for Chinook salmon
Johnson, G. E., Sather, N. K., Skalski, J. R., & Teel, D. J. (2013) · Ecological Indicators · doi:10.1016/j.ecolind.2013.11.005 · Cited by 5 · see citing works
Self-citationA salmon ecosystem conceptual foundation for estuary restoration
Bottom, D. L., Jones, K. K., Borde, A. B., Krueger, K. L., Johnson, G. E., Castro, J. M., & Thom, R. M. (2025) · Canadian Journal of Fisheries and Aquatic Sciences · doi:10.1139/cjfas-2025-0139 · Cited by 3 · see citing works
Self-citationWelch, D. W., Porter, A. D., & Rechisky, E. L. (2018) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/476408 · Cited by 2 · see citing works
Subyearling Chinook salmon diets in Lower Columbia River estuarine habitats
Accola, K., Cordell, J., Oxborrow, B., Toft, J. D., Suzumura, A., & Grote, J. (2025) · PLOS One · doi:10.1371/journal.pone.0325939 · Cited by 1 · see citing works
“…presence in main channel diets highlights the importance of tidal wetlands as prey sources to the varying Chinook life history patterns in the LCRE [20], including fast-moving main channel yearling salmon that mostly originate from interior stocks [61,62], and smaller LCEP EMP subyearling Chinook…”
Change in variability in the Columbia River estuary: a habitat perspective
Rostaminia, M. (2017) · doi:10.6083/3r074v462 · Cited by 1 · see citing works
Pacific Northwest National Lab. (PNNL), R., Diefenderfer, H. L., USDOE, Johnson, G. E., Thom, 孟. 陆. R., Borde, A. B., Woodley, C., Weitkamp, L. A., Buenau, K. E., & Kropp, R. K. (2013) · doi:10.2172/1113603 · Cited by 1 · see citing works
Claxton, A., Weitkamp, L. A., & Jacobson, K. C. (2018) · Northwest Science · doi:10.3955/046.092.0108
“Beach and purse seining methodologies were similar to those described in Roegner et al. (2012) and Weitkamp et al. (2012), respectively.”
MethodPacific Northwest National Lab. (PNNL), R., Johnson, G. E., & USDOE (2014) · doi:10.2172/1170493
Sol, S. Y., Hanson, A. C., Marcoe, K., et al. (2019) · North American Journal of Fisheries Management · doi:10.1002/nafm.10374
Pacific Northwest National Lab. (PNNL), R., Johnson, G. E., & USDOE (2015) · doi:10.2172/1224511
Sather, N. K., Martin-Schwarze, A. M., Mackereth, K. F., & Johnson, G. E. (2026) · Estuaries and Coasts · doi:10.1007/s12237-025-01649-3 · Cited by 1 · see citing works
Weitkamp, L. A., Teel, D. J., Liermann, M., Hinton, S. A., Van Doornik, D. M., & Bentley, P. J. (2015) · Marine and Coastal Fisheries · doi:10.1080/19425120.2015.1047476 · Cited by 47 · see citing works
“…subyearling Chinook Salmon in the Columbia River estuary make greater use of shallow-water habitats and have broader temporal distributions than subyearling hatchery fish, which are abundant in deep-channel habitats (Dawley et al. 1986; Roegner et al. 2012; Weitkamp et al. 2012; Teel et al. 2014).”
BackgroundInfluentialSelf-citationDaly, E. A., Scheurer, J. A., Brodeur, R. D., Weitkamp, L. A., Beckman, B. R., & Miller, J. A. (2014) · Marine and Coastal Fisheries · doi:10.1080/19425120.2013.869284 · Cited by 28 · see citing works
“A higher proportion of wild Chinook Salmon was sampled in the shallow beach areas of the estuary relative to collections from the estuary channel, suggesting that the wild fish were closer to shore (Roegner et al. 2012; Weitkamp et al. 2012).”
BackgroundMorrice, K. J., Baptista, A. M., & Burke, B. J. (2020) · Ecological Modelling · doi:10.1016/j.ecolmodel.2020.109003 · Cited by 24 · see citing works
“Rich (1920) estimated growth rates of 0.44 mm d −1 from rkm 261 to the river mouth, while other studies have identified growth rates of 0.25 and 0.31 mm d −1 (McCabe et al., 1986; Roegner et al., 2012).”
InfluentialBottom, D. L., Hinton, S. A., Teel, D. J., Curtis Roegner, G., Johnson, L. L., & Sandford, B. P. (2021) · North American Journal of Fisheries Management · doi:10.1002/nafm.10671 · Cited by 8 · see citing works
Self-citation
- Authors
- Roegner, G. C., McNatt, R., Teel, D. J., & Bottom, D. L.
- Affiliations
- NOAA National Marine Fisheries Service (US)
- Corresponding author
- Roegner, G. Curtis
- Venue
- Marine and Coastal Fisheries
- Publisher
- Oxford University Press (OUP)
- Published
- 2012-01-01
- Volume
- 4
- Issue
- 1
- Pages
- 450-472
- ISSN
- 1942-5120 (ISSN-L)
- OpenAlex
- W2122078638
- Cited by
- 36
- References
- 61
- Citations by year
- 2026: 1 · 2025: 2 · 2024: 1 · 2021: 1 · 2020: 1 · 2019: 2 · 2018: 4 · 2017: 2 · 2016: 6 · 2015: 4 · 2014: 9 · 2013: 3
- FWCI
- 4.89
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Locations
- Marine and Coastal Fisheries (publishedVersion, cc-by)
- BioOne Complete (BioOne) (submittedVersion)
- Funders
- U.S. Army Corps of Engineers
- National Marine Fisheries Service
- Topics
- Physical Sciences › Environmental Science › Nature and Landscape Conservation › Fish Ecology and Management Studies
- Physical Sciences › Environmental Science › Global and Planetary Change › Marine and fisheries research
- Life Sciences › Agricultural and Biological Sciences › Aquatic Science › Fish Biology and Ecology Studies
- Keywords
- juvenile Chinook salmon, Oncorhynchus tshawytscha, Lower Columbia River, Columbia River estuary, shallow-water habitats, hatchery production, migration timing, habitat restoration, coded wire tags
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Claims read by deepseek-v4.1-flash under definition version 3 (extract-v3) on 2026-10-27.
Classified by jev-1.13-20260917 (gold-guideline-v0.2) on 2026-10-27.
Cited sources are checked by gpt-6-sol.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review