Cited by 36Fish Ecology and Management StudiesMarine and fisheries researchFish Biology and Ecology Studies

Distribution, Size, and Origin of Juvenile Chinook Salmon in Shallow-Water Habitats of the Lower Columbia River and Estuary, 2002–2007

Open access
Roegner, G. Curtis, McNatt, Regan, Teel, David J., Bottom, Daniel L.·2012·Marine and Coastal Fisheries

Abstract

We monitored fish assemblages monthly at estuarine and tidal freshwater sites in the lower Columbia River and estuary from January 2002 through September 2007 in order to identify specific salmon stocks and migration stages that may benefit from habitat restoration initiatives. We report landscape-scale and seasonal variation in abundance, size, hatchery production (based on adipose fin clips), and genetic stock of origin of juvenile Chinook salmon Oncorhynchus tshawytscha. From fish implanted with coded wire tags (CWTs), we also determined the sites of release and inferred migration patterns. Chinook salmon were found in diverse life history stages and forms, including fry migrants, fingerlings, and (fewer) yearlings. Abundance increased in February and decreased in August, but salmon were present in all months each year. Spatial gradients in abundance and size were strong, with fewer but larger fish in brackish than in tidal freshwater zones. Overall, 30% of the Chinook salmon measured were fry (≤60 mm) that were likely naturally produced fish. These occurred at higher mean monthly proportions in tidal freshwater than in estuarine zones. In contrast, most larger fish were probably raised in hatcheries. Genetic stock assessment revealed that the majority of the Chinook salmon analyzed were from fall-run stock groups originating in the lower Columbia River, with 15% originating from other stock groups. Of these minority contributors, about 6% were identified as upper Columbia River summer–fall-run Chinook salmon while seven other stock groups accounted for the remainder, including 3% from transplants originating in southern Oregon's Rogue River. Recaptures of tagged fish revealed maximum migration times of 143 d for subyearlings and 52 d for yearlings, and both CWT and genetic data indicated that fall Chinook salmon from coastal rivers occasionally entered the estuary. These data demonstrated a widespread temporal and spatial distribution of subyearling Chinook salmon in shallow-water habitats of the lower Columbia River and estuary. Received June 28, 2011; accepted February 28, 2012

AI snapshot

Written from the paper’s full text.

TL;DR

This 6-year beach-seine study documents widespread seasonal and spatial use of shallow tidal freshwater and estuarine habitats in the lower Columbia River and estuary by juvenile Chinook salmon, mostly subyearling fall-run fish. It combines size, marks/tags, coded wire tags, and genetic stock identification to show that small natural-origin fry concentrate in tidal freshwater while larger, mostly hatchery-origin fish dominate downstream estuarine zones.

Key findings

  • From 2002–2007, 11,988 Chinook salmon were caught; of 6,195 measured fish, 97.4% were subyearlings and 156 were yearlings. Fry (≤60 mm) made up 30.0% of measured Chinook and were most prevalent in tidal freshwater (41.5%) versus middle estuary (23.2%) and lower estuary (13.7%).
  • Abundance and size showed strong spatial gradients: mean ± SE CPUE was 46.3 ± 7.3 in tidal freshwater and 10.8 ± 2.6 in the lower estuary; mean fork length was 68.7 ± 2.4 mm in tidal freshwater versus 85.2 ± 4.2 mm in the lower estuary and 84.1 ± 3.8 mm in the middle estuary.
  • Genetic stock identification of 2,174 fish (2002–2006) found most were lower Columbia River fall-run stocks: West Cascade tributary fall (51%) and Spring Creek group tule fall (34%); minority contributors included upper Columbia River summer-fall (6%), West Cascade tributary spring (3%), Rogue River fall (3%), and Willamette River spring (1%).
  • Marks and tags indicated probable hatchery origin for 16.1% of examined Chinook overall; subyearling adipose-fin-clip rates rose from 8.0 ± 2.0% in 2002–2006 to 53.2 ± 13.7% in 2007–2008. Coded-wire-tag recaptures showed maximum migration times of 143 d for subyearlings and 52 d for yearlings, with subyearling rates from 0.25 to 42 km/d and yearling rates from 2 to 26 km/d.

Methods

  • Monthly beach-seine sampling from January 2002 through September 2007 at six primary sites grouped into tidal freshwater, middle estuary, and lower estuary zones; adverse weather prevented sampling on 25 of 460 (5.4%) sample dates.
  • Fish were measured, weighed, examined for fin clips and tags, and sampled for microsatellite DNA; genetic stock composition was estimated with a 45-population baseline and ONCOR, with individual assignments restricted to ≥0.90 probability for size-frequency plots.
  • Analyses used two-way and one-way ANOVA with Tukey’s HSD on log10-transformed CPUE and size by zone and season, linear regression of mean size over time, and coded-wire-tag recoveries to infer release location, migration duration, and migration rate.

Limitations

  • Stated: no attempt was made to quantify site characteristics such as slope, submerged vegetation, or wave exposure; unmarked fish likely included both natural- and hatchery-origin fish because some Columbia River hatcheries released unmarked juveniles; yearling genetic stock composition was based on only 36 individuals; individual fish plots excluded about 25% of samples with lower-probability assignments, and Deschutes River summer-fall and middle/upper Columbia River spring runs were not represented in those plots.
  • Stated: causes of spatial variation in subyearling size could not be definitively determined with the data; coded-wire-tag sample sizes were small, though 26 of 30 genetic stock estimates with ≥0.90 probability agreed with CWT origins.
  • Evident: the study reports broad landscape and seasonal patterns from six primary beach-seine sites, so it does not characterize deep midchannel habitats or all shallow-water habitat types in the lower Columbia River and estuary.

Model-written summary. Check it against the paper before relying on it.

Integrity signals

Registry

Crossref · 10.1080/19425120.2012.675982

Cites

57 of 57 references verified0 citation errors · 0 not checkable

Statistics

Nothing to recompute.

Claims the paper makes

3 of 39 cited sources checked · 2 supported · 0 flagged · accuracy not yet measured

  • Interpretationcitation

    Sites further upriver are likely to have a different stock component utilizing shallow-water habitat in those areas.

    “Sites further upriver are likely to have a different stock component utilizing shallowwater habitat in those areas (Sather et al. 2009;Teel et al. 2009).”
    Quote in the paperNot a substantial claim1 of 2 sources checked
    • cites Sather et al. 2009 source

      Section 5.4 (Genetics; page not available) reports different predominant juvenile Chinook stock groups in lower-estuary nearshore habitats and the Sandy River delta, supporting a difference between locations along the river. It does not establish that sites farther upriver than the study area are likely to have a different stock component in their shallow-water habitats. (LLM, conf=0.78)

      Experimental — accuracy not yet measured
    • cites Teel et al. 2009 source
  • Findingown data

    Overall, 30% of the Chinook salmon measured were fry (≤60 mm).

    “Thirty percent of all Chinook salmon measured were fry (≤60 mm; Table 1; Figure 2).”
    • Also stated in: § Abstract · hedged
      “Overall, 30% of the Chinook salmon measured were fry (≤60 mm) that were likely naturally produced fish.”
    Quote in the paperNot a substantial claim
  • Findingown data

    About 3% of the minority genetic contributors were from transplants originating in southern Oregon's Rogue River.

    “Of these minority contributors, about 6% were identified as upper Columbia River summer-fall-run Chinook salmon while seven other stock groups accounted for the remainder, including 3% from transplants originating in southern Oregon's Rogue River.”
    Quote in the paperNot a substantial claim
  • Findingown data

    Fry occurred at higher mean monthly proportions in tidal freshwater than in estuarine zones.

    “These occurred at higher mean monthly proportions in tidal freshwater than in estuarine zones.”
    Quote in the paperSubstantial claim
  • Findingown data

    Chinook salmon in the lower Columbia River and estuary were found in diverse life history stages and forms, including fry migrants, fingerlings, and fewer yearlings.

    “Chinook salmon were found in diverse life history stages and forms, including fry migrants, fingerlings, and (fewer) yearlings.”
    Quote in the paperSubstantial claim
  • Classified as probably not a substantial claim. 20
  • May combine two claims. 88
  • The quote only partly states this claim. 4
  • Probably not a substantial claim: may not pass S2 (checkable), S3 (load-bearing).

    Premisecitation

    The ability of many salmon stocks to express diverse life histories during the juvenile phase is thought to be an important adaptive mechanism for mitigating natural environmental variability.

    “The ability of many salmon stocks to express diverse life histories during the juvenile phase is thought to be an important adaptive mechanism for mitigating natural environmental variability (Healey 1991;Waples et al. 2009).”
    Quote in the paperNot a substantial claim1 of 2 sources checked
    • cites Healey 1991

      Couldn’t be matched to a paper in Crossref, so it can’t be checked.

    • cites Waples et al. 2009 source
  • May combine two claims.

    Findingcitation

    More than half of the unmarked juveniles observed by Sather et al. (2009) were stocks from the interior Columbia River basin, a much greater proportion than observed at our shallow-water sites.

    “However, more than half of the unmarked juveniles observed by Sather et al. (2009) were stocks from the interior Columbia River basin, a much greater proportion than we observed at our shallow-water sites.”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites Sather et al. (2009) source
  • May combine two claims.

    Findingown data

    Spatial gradients in Chinook salmon abundance and size were strong, with fewer but larger fish in brackish than in tidal freshwater zones.

    “Spatial gradients in abundance and size were strong, with fewer but larger fish in brackish than in tidal freshwater zones.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    The majority of Chinook salmon analyzed genetically were from fall-run stock groups originating in the lower Columbia River, with 15% originating from other stock groups.

    “Genetic stock assessment revealed that the majority of the Chinook salmon analyzed were from fall-run stock groups originating in the lower Columbia River, with 15% originating from other stock groups.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Chinook salmon abundance increased in February and decreased in August, but salmon were present in all months each year.

    “Abundance increased in February and decreased in August, but salmon were present in all months each year.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    During summer-fall, catches were moderate throughout the tidal gradient but significantly higher in the tidal freshwater zone.

    “During summer-fall, catches were moderate throughout the tidal gradient but significantly higher in the tidal freshwater zone.”
    Quote in the paperNot a substantial claim
  • The quote only partly states this claim.

    Findingown data

    Coded-wire-tagged subyearling Chinook salmon were recaptured at estuarine and tidal freshwater sites with time to capture ranging from 4 to 137 days.

    “| Elochoman River | WA | 1 | 7 Jun 2007 | LES | WA | 4 | 10.50 |”
    • Also stated in: § Consequences for Restoration · plain
      “| Kalama River | WA | 1 | 18 Jun 2002 | ETI | OR | 137 | 0.61 |”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Tagged fish were recovered from March through October and were migrating from 1 to 143 d at rates between 0.25 and 42 km/d.

    “Tagged fish were recovered from March through October and were migrating from 1 to 143 d at rates between 0.25 and 42 km/d.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    The lowest subyearling abundances were found in the lower estuary zone, where abundance peaked in July.

    “The lowest abundances were found in the lower estuary zone, where abundance peaked in July.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    In the lower estuary, mean size increased from winter to summer-fall, while in the other zones fish were significantly larger in summer-fall than in other seasons.

    “In the lower estuary, mean size increased from winter to summer-fall, while in the other zones fish were significantly larger in summer-fall than in other seasons.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    In all years, Chinook salmon were found during every month, although at low abundance during October-January.

    “In all years, we found Chinook salmon during every month, although at low abundance during October-January (Figures 2, 3).”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    The presence of fish in the 30-40-mm range was generally synchronous across all sample sites in January-March, indicating a rapid dispersion of newly emerged fish from their natal streams.

    “The presence of fish in the 30-40-mm range was generally synchronous across all sample sites in January-March (Figures 2, 7), indicating a rapid dispersion of newly emerged fish from their natal streams, as has been observed elsewhere (e.g., Healey 1980;Bottom et al. 2005a).”
    Quote in the paperNot a substantial claim0 of 2 sources checked
    • cites Healey 1980

      Couldn’t be matched to a paper in Crossref, so it can’t be checked.

    • cites Bottom et al. 2005a

      Couldn’t be matched to a paper in Crossref, so it can’t be checked.

  • May combine two claims.

    Findingnone given

    Fewer fry were captured in the middle estuary zone, where they were most abundant from March through June but were present as late as August.

    “Fewer fry were captured in the middle estuary zone, where they were most abundant from March through June but were present as late as August.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    The lowest numbers of fry were found in the lower estuary zone, where they were most abundant in March but were largely absent after June.

    “The lowest numbers of fry were found in the lower estuary zone, where they were most abundant in March but were largely absent after June.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Upper Columbia River summer-fall fingerlings made up a larger proportion in summer-fall than in spring, most notably in the lower estuary zone, where the stock contributed 1% in spring and 20% in summer-fall.

    “Upper Columbia River summer-fall fingerlings made up a larger proportion in summer-fall than in spring, most notably in the lower estuary zone, where the stock contributed 1% in spring and 20% in summer-fall.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    At tidal freshwater sites in spring, the Spring Creek group stock accounted for 16% of the catch for fry but 51% for fingerlings.

    “At tidal freshwater sites in spring, the Spring Creek group stock accounted for 16% of the catch for fry but 51% for fingerlings, as noted above.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    The highest overall percentage of fry occurred in the tidal freshwater zone (41.5%), followed by the middle (23.2%) and lower estuary (13.7%) zones.

    “The highest overall percentage of fry occurred in the tidal freshwater zone (41.5%), followed by the middle (23.2%) and lower estuary (13.7%) zones (Figure 7).”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    We captured only three PIT-tagged fish; two were from lower river tributaries, and the other was a subyearling migrant released from the Snake River 10 km above the confluence with the Clearwater River.

    “We captured only three PIT-tagged fish; two were from lower river tributaries, and the other was a subyearling migrant released from the Snake River 10 km above the confluence with the Clearwater River.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    There were significant differences among catches across seasons, with catches highest during spring (50.7 ± 6.9), intermediate in summer-fall (21.4 ± 3.6), and lowest during winter (5.9 ± 1.5).

    “There were significant differences among catches across seasons (Figure 4B), with catches being highest during spring (50.7 ± 6.9), intermediate in summer-fall (21.4 ± 3.6), and lowest during winter (5.9 ± 1.5).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Chinook salmon subyearlings were found year-round but were broadly distributed in time from February through August.

    “Chinook salmon subyearlings were found year-round but were broadly distributed in time from February through August.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    The Spring Creek group tule fall-run stock was also present in spring samples but was largely absent during summer-fall.

    “The other tule fall-run stock in our analysis, the Spring Creek group, was also present in spring samples but was largely absent during summer-fall.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    At middle estuary sites, Spring Creek group fish contributed 34% to the fry population but 70% to fingerling life histories.

    “Similarly, at middle estuary sites, the Spring Creek group fish contributed 34% to the fry population, but more than double that amount (70%) to fingerling life histories.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    The highest mean monthly catches of subyearlings occurred in the tidal freshwater zone, with a broad peak from April to June.

    “The highest mean monthly catches of subyearlings occurred in the tidal freshwater zone, with a broad peak from April to June (Figure 3).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Thirteen percent of subyearlings migrated at rates >20 km/d, 28% at rates between 10 and 20 km/d, and 58% at rates <10 km/d.

    “Thirteen percent of subyearlings migrated at rates >20 km/d, 28% at rates between 10 and 20 km/d, and 58% at rates <10 km/d.”
    Quote in the paperNot a substantial claim
  • The quote only partly states this claim.

    Findingown data

    In beach seine samples from 2002-2007, yearling Chinook salmon were rare in all zones, comprising 2.5% of the total catch.

    “| Yearling | 84 | 2.9 | 56 | 2.5 | 16 | 1.4 | 156 | 2.5 |”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    In beach seine samples from 2002-2007, the proportion of fry Chinook salmon was highest in tidal freshwater (41.5%) and lowest in the lower estuary (13.7%).

    “| Fry | 1,196 | 41.5 | 511 | 23.2 | 152 | 13.7 | 1,859 | 30.0 |”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingreasoning

    By November mean fork lengths in the tidal freshwater zone remained <100 mm while fish at the lower and middle estuary stations averaged between 120 and 150 mm.

    “For example, by November mean fork lengths in the tidal freshwater zone remained <100 mm while fish at the lower and middle estuary stations averaged between 120 and 150 mm.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    The Spring Creek group fall stock contributed the greatest proportion of fry during winter, comprising 40% in the tidal freshwater zone and 75% in the middle estuary zone.

    “The Spring Creek group fall stock contributed the greatest proportion of fry during winter, comprising 40% in the tidal freshwater zone and 75% in the middle estuary zone.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    In the tidal freshwater zone, all seasons differed, with spring having the highest and winter the lowest catches.

    “In the tidal freshwater zone, all seasons differed, with spring having the highest and winter the lowest catches.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Yearling abundance was concentrated in March and early April in the tidal freshwater zone, where they composed 2.9% of the measured population.

    “Yearling abundance was concentrated in March and early April in the tidal freshwater zone, where they composed 2.9% of the measured population.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Fish released from Spring Creek Hatchery exhibited the highest migration rate as well as some of the lowest migration rates, along with fish released from the Kalama and Cowlitz hatcheries.

    “Fish released from Spring Creek Hatchery exhibited the highest migration rate as well as some of the lowest migration rates, along with fish released from the Kalama and Cowlitz hatcheries.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Of the 6,195 fish that were measured, 97.4% were subyearlings and only 156 were yearlings.

    “Of the 6,195 fish that were measured, 97.4% were subyearlings and only 156 were yearlings (Figure 2; Table 1).”
    Quote in the paperNot a substantial claim
  • The quote only partly states this claim.

    Findingown data

    Among yearling Chinook salmon across all zones and seasons, the Spring Creek fall genetic stock group was the most abundant, comprising 46.2% of 36 fish.

    “All 36 0.028 0.462 0.371 0.034 0.000 0.017 0.062 0.000 0.028 0.000 0.000”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    The furthest migrant was a yearling Chinook salmon that had originated in the Tucannon River, Washington (rkm 680), and represented the Snake River spring stock.

    “The furthest migrant was a yearling Chinook salmon that had originated in the Tucannon River, Washington (rkm 680), and represented the Snake River spring stock.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    West Cascade Tributary fall fingerlings were the second most abundant stock, with the highest proportion in tidal freshwater (45%) and the lowest in the lower estuary zone (5%).

    “West Cascade Tributary fall fingerlings were the second most abundant stock, with the highest proportion occurring in the tidal freshwater (45%) and the lowest proportion in the lower estuary zone (5%).”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Mean salmon fork length differed significantly among zones, with the smallest mean size at tidal freshwater sites and the largest at lower estuary sites.

    “Mean salmon fork length differed significantly among zones, with the smallest mean size being found at tidal freshwater sites and the largest at lower estuary sites (Figure 5).”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Smaller stock proportions included the upper Columbia River summer-fall (6%), West Cascade tributary spring (3%), Rogue River fall (3%), and Willamette River spring (1%) stocks.

    “Smaller stock proportions included the upper Columbia River summer-fall (6%), West Cascade tributary spring (3%), Rogue River fall (3%), and Willamette River spring (1%) stocks (Table A.2).”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    The fewest number and smallest proportion of yearlings were found in the lower estuary zone (1.4%), where abundance peaked during April and May.

    “The fewest number and smallest proportion of yearlings were found in the lower estuary zone (1.4%), where abundance peaked during April and May.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    In the middle estuary zone, subyearling abundance followed a bimodal distribution, with peaks in May and July and maximum abundance about half of that in the tidal freshwater zone.

    “In the middle estuary zone, abundance followed a bimodal distribution, with peaks occurring in May and July and maximum abundance levels about half of those seen in the tidal freshwater zone.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Days postrelease ranged from 4 to 52, and migration rates ranged from 2 to 26 km/d; most tagged yearling Chinook migrated at rates less than 10 km/d.

    “Days postrelease ranged from 4 to 52, and migration rates ranged from 2 to 26 km/d; however, most tagged yearling Chinook migrated at rates less than 10 km/d.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Yearling fish were generally present during March-May, while subyearlings were present year-round.

    “Yearling fish were generally present during March-May, while subyearlings were present year-round.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Mean monthly catches differed between zones, and CPUE was significantly higher in the tidal freshwater zone in all seasons except winter, when catches were low and variable in all zones.

    “Mean monthly catches differed between zones (Figure 3), and CPUE was significantly higher in the tidal freshwater zone in all seasons except winter, when catches were low and variable in all zones (Figure 4C).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    At the tidal freshwater sites, fry in the size range of 40-60 mm were abundant from March to July and were present as late as September.

    “At the tidal freshwater sites, fry in the size range of 40-60 mm were abundant from March to July and were present as late as September.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Three tagged fish originated from hatcheries outside the Columbia River basin: two from the Nemah River in Willapa Bay, Washington, and one from the Quinault River on the Washington coast.

    “For example, three fish originated from hatcheries outside the Columbia River basin: two were from the Nemah River in Willapa Bay, Washington, and one was from the Quinault River on the Washington coast.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    West Cascade tributary spring stock and, to a lesser extent, Willamette River spring stock fry were present in both winter and spring.

    “The West Cascade tributary spring stock and, to a lesser extent, the Willamette River spring stock fry were present in both winter and spring.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    No size differences were found among the three zones in winter, mainly due to high variance.

    “No size differences were found among the three zones in winter, mainly due to high variance (Figure 5C).”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Sixty-eight percent of subyearlings had been migrating for <30 d, 21% between 30 and 60 d, and 11% for >60 d.

    “Sixty-eight percent of subyearlings had been migrating for <30 d, 21% between 30 and 60 d, and 11% for >60 d.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Tests for differences in CPUE and for size grouped by zone and season indicated significant main effects and interaction terms (ANOVA; both P < 0.001).

    “Tests for differences in CPUE and for size grouped by zone and season indicated significant main effects and interaction terms (ANOVA; both P < 0.001).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Of the yearling Chinook salmon sampled, 87% were spring-run stocks, with 46% from West Cascade tributaries, 37% from the Willamette River, 3% from the Snake River, and 1% from the mid-Columbia River.

    “Of these, 87% were spring-run stocks, with 46% from West Cascade tributaries, 37% from the Willamette River, 3% from the Snake River, and 1% from the mid-Columbia River.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Findingown data

    Most marks were adipose fin clips.

    “Most marks were adipose fin clips.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    The predominant species and life history types utilizing the monitored sites were subyearling Chinook and chum salmon.

    “The predominant species and life history types utilizing the monitored sites were subyearling Chinook and chum salmon.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Fry comprised a high percentage of the catch at most sites from January through April; the proportion of fry diminished at lower and middle estuary sites after April, while remaining relatively high in the tidal freshwater zone until August.

    “Fry comprised a high percentage of the catch at most sites from January through April; the proportion of fry diminished at lower and middle estuary sites after April, while remaining relatively high in the tidal freshwater zone until August (Figure 7).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingcitation

    The chum population was composed almost entirely of fry-sized animals and was most prevalent in estuarine sites over a contracted migration period during March-May.

    “The chum population was composed almost entirely of fry-sized animals and was most prevalent in estuarine sites over a contracted migration period during March-May (Roegner et al. 2008).”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites Roegner et al. 2008

      Couldn’t be matched to a paper in Crossref, so it can’t be checked.

  • May combine two claims.

    Findingown data

    The contemporary fry threshold in the tidal freshwater zone occurs in late April, whereas Dawley et al. (1985) found mean size exceeded 60 mm by March in most years.

    “Dawley et al. (1985) found the mean size of Chinook subyearling salmon exceeded 60 mm by March of most years in the tidal freshwater zone, whereas regression statistics indicate the contemporary fry threshold in the tidal freshwater zone occurs in late April (Figure 6).”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites Dawley et al. (1985)

      Couldn’t be matched to a paper in Crossref, so it can’t be checked.

  • May combine two claims.

    Findingown data

    11 of the 13 Columbia River stock groups were represented among the samples collected; CWT data indicate relatively long migration times for both subyearling and yearling fish and show a protracted residency for a portion of the salmon population.

    “However, 11 of the 13 Columbia River stock groups were also represented among the samples collected; moreover, CWT data indicate relatively long migration times for both subyearling and yearling fish and show a protracted residency for a portion of the salmon population.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Analysis of release groups provided evidence of both schooling and wide spatial dispersion, along with variations in migration rate within and between groups.

    “Analysis of release groups provided evidence of both schooling and wide spatial dispersion, along with variations in migration rate within and between groups (Table 4).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Coded wire tags confirmed genetic source data, which showed that the fingerlings found in shallow-water habitat were primarily from a variety of lower-river hatchery stocks.

    “Coded wire tags confirmed genetic source data, which showed that the fingerlings found in shallow-water habitat were primarily from a variety of lower-river hatchery stocks (Table 3; Figure 12).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Yearling abundance was concentrated during March and April, although individual yearling fish were captured at all landscape zones outside these main migration periods.

    “Yearling abundance was concentrated during March and April, although individual yearling fish were captured at all landscape zones outside these main migration periods.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    During summer-fall (July-October), the proportion of Spring Creek group fingerlings declined to less than 10% in all regions and West Cascade tributary fall stocks dominated with proportional abundances of 83, 62, and 52% in the tidal freshwater, middle estuary, and lower estuary zones.

    “However, during summer-fall (July-October), the proportion of Spring Creek group fingerlings declined to less than 10% in all regions and West Cascade tributary fall stocks dominated with respective proportional abundances of 83, 62, and 52% in the tidal freshwater, middle estuary, and lower estuary zones.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Relatively few yearling Chinook salmon were sampled, and the genetic stock composition estimate was derived from 36 individuals.

    “Relatively few yearling Chinook salmon were sampled in our study, and the genetic stock composition estimate was derived from 36 individuals (Figure 8).”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Summer and fall samples were dominated by the West Cascade tributary fall stock group and included increasing proportions of Upper Columbia summer-fall juveniles, particularly in the lower estuary (20% of fingerlings).

    “Summer and fall samples were dominated by the West Cascade tributary fall stock group and included increasing proportions of Upper Columbia summer-fall juveniles, particularly in the lower estuary (20% of fingerlings).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Overall, mean ± SE catches trended from 46.3 ± 7.3 in the tidal freshwater zone to 10.8 ± 2.6 in the lower estuary zone, with significantly lower catches near the mouth of the estuary.

    “Overall, mean ± SE catches trended from 46.3 ± 7.3 in the tidal freshwater zone to 10.8 ± 2.6 in the lower estuary zone, with significantly lower catches near the mouth of the estuary (Figure 4A).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    There was no relation between migration rate and either size at capture or release location.

    “There was no relation between migration rate and either size at capture or release location (Figure 12).”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    In our study, CWT-derived migration rates ranged from 2.4 to 25.8 km/d, with postrelease periods up to 52 d.

    “In our study, CWT-derived migration rates ranged from 2.4 to 25.8 km/d, with postrelease periods up to 52 d (Figure 12).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Upper Clifton Channel had the highest overall percent fry abundance (42.2%) and exhibited high mean monthly percentages from January through July.

    “Upper Clifton Channel had the highest overall percent fry abundance (42.2%) and exhibited high mean monthly percentages from January through July”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    In all samples across all seasons and zones (2002-2006), the Willamette River spring genetic stock group was the most abundant, comprising 50.8% of 2,138 Chinook salmon.

    “All 2,138 0.508 0.028 0.013 0.338 0.003 0.000 0.062 0.008 0.001 0.025 0.014”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    From 2002 to 2006, 8.0 ± 2.0% of subyearling Chinook salmon were adipose fin clipped, but during 2007-2008 this rate increased to 53.2 ± 13.7% (range, 30.1-65.9%).

    “From 2002 to 2006, 8.0 ± 2.0% of subyearling Chinook salmon were adipose fin clipped (Table 2), but during 2007-2008 this rate increased to 53.2 ± 13.7% (range, 30.1-65.9%).”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Migration rates ranged from <1 to 29 km/d, and many fish from below Bonneville Dam resided for an extended period in the lower river and/or brackish estuary.

    “Migration rates ranged from <1 to 29 km/d, and many fish from below Bonneville Dam resided for an extended period in the lower river and/or brackish estuary.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    The Spring Creek group fall fish migrated through the system early in the year, and by summer and fall few of this stock were present at shallow-water sampling sites.

    “The Spring Creek group fall fish migrated through the system early in the year, and by summer and fall few of this stock were present at our shallow-water sampling sites.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    In spring, catches increased in all zones, but there was a significant gradient of decreasing catch with downstream location.

    “In spring, catches increased in all zones, but there was a significant gradient of decreasing catch with downstream location.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Fry were present at all sites, and recently emerged individuals (31-45 mm) appeared simultaneously throughout the LCRE in early spring.

    “Fry were present at all sites, and recently emerged individuals (31-45 mm) appeared simultaneously throughout the LCRE in early spring.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Regression coefficients implied that size at capture in tidal freshwater regions was half that in the lower estuary zone and differed as much as 40 mm by late summer.

    “Regression coefficients implied that size at capture in tidal freshwater regions was half that in the lower estuary zone (Figure 6) and differed as much as 40 mm by late summer.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Most Chinook salmon fry used in the genetic analysis were sampled from tidal freshwater sites and were identified as belonging to the West Cascade tributary fall stock group in both the spring (78%) and summer-fall (97%) sampling periods.

    “Most Chinook salmon fry used in the genetic analysis were sampled from tidal freshwater sites and were identified as belonging to the West Cascade tributary fall stock group in both the spring (78%) and summer-fall (97%) sampling periods (Figures 9, 10).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    In the middle estuary, yearling abundance was 2.5% of the salmonid population and was concentrated in late March to early May.

    “In the middle estuary, yearling abundance (2.5% of the salmonid population) was concentrated in late March to early May.”
    Quote in the paperNot a substantial claim
  • The quote only partly states this claim.

    Findingown data

    Among spring fingerlings in tidal freshwater, the West Cascade tributary spring genetic stock group was the most abundant, comprising 50.9% of 318 fish.

    “TFW 318 0.445 0.006 0.000 0.509 0.003 0.000 0.034 0.000 0.000 0.003 0.000”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Findingnone given

    At all sites, high variance was evident in the monthly averages.

    “At all sites, high variance was evident in the monthly averages.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    The early 1914-1916 investigation indicated that a variety of subyearling migration patterns were present.

    “This early investigation indicated that a variety of subyearling migration patterns were present.”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites Rich 1920

      Couldn’t be matched to a paper in Crossref, so it can’t be checked.

  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    The abundance of salmonid populations in the Columbia River basin has declined through the past 150 years due in part to alterations of salmon habitat, including degradation and loss of spawning and rearing areas, alteration of river flows, and impediments to juvenile and adult migrations.

    “The abundance of salmonid populations in the Columbia River basin has declined through the past 150 years due in part to alterations of salmon habitat (Myers et al. 2006), including the degradation and loss of spawning and rearing areas, alteration of river flows from historical patterns, and impediments to juvenile and adult migrations (Sherwood et al. 1990;Sheer and Steel 2006).”
    Quote in the paperNot a substantial claim0 of 3 sources checked
    • cites Myers et al. 2006
    • cites Sherwood et al. 1990 source
    • cites Sheer and Steel 2006 source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    Reimers and Loeffel (1967) found differences in emergence rates, growth, and residency between the larger, colder rivers draining Mt. St. Helens and the smaller, warmer rivers draining Coast Range watersheds.

    “Subsequently, Reimers and Loeffel (1967) found differences in emergence rates, growth, and residency between the larger, colder rivers draining Mt.St. Helens and the smaller, warmer rivers draining Coast Range watersheds.”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites Reimers and Loeffel (1967)
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Premisecitation

    The years 1934 to 1971 saw dam construction on the Columbia and Snake rivers and on many of their tributaries, which severely eliminated habitat and curtailed salmon migration patterns.

    “The years 1934 to 1971 saw dam construction on the Columbia and Snake rivers and on many of their tributaries, which severely eliminated habitat and curtailed salmon migration patterns (Bottom et al. 2005b).”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites Bottom et al. 2005b

      Couldn’t be matched to a paper in Crossref, so it can’t be checked.

  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    From 1966 to 1983, an extensive beach- and purse-seining effort documented the abundance, distribution, migration patterns, and postrelease survival of wild and hatchery-reared salmon and steelhead, including subyearling Chinook salmon.

    “From 1966 to 1983, an extensive beach-and purse-seining effort documented the abundance, distribution, migration patterns, and postrelease survival of wild and hatchery-reared salmon and steelhead, including subyearling Chinook salmon”
    Quote in the paperNot a substantial claim0 of 3 sources checked
    • cites Durkin 1982 source
    • cites Dawley et al. 1985

      Couldn’t be matched to a paper in Crossref, so it can’t be checked.

    • cites Dawley et al. 1986

      Couldn’t be matched to a paper in Crossref, so it can’t be checked.

  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    Since that time, 13 Columbia River basin Pacific salmon and steelhead evolutionarily significant units have been listed as threatened or endangered under the U.S. Endangered Species Act.

    “Since that time, 13 Columbia River basin Pacific salmon and steel-head evolutionarily significant units (ESUs) have been listed as threatened or endangered under the U.S. Endangered Species Act (Good et al. (2005), prompting changes to the way the Federal Columbia River Power System (FCRPS) has been operated and managed.”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites Good et al. (2005)
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Study design and conductown data

    Sites were sampled monthly from January 2002 through September 2007, although adverse weather prevented sampling on 25 of 460 (5.4%) sample dates, usually in November through February.

    “Sites were sampled monthly from January 2002 through September 2007, although adverse weather prevented sampling on 25 of 460 (5.4%) sample dates, usually in November through February.”
    Quote in the paperNot a substantial claim
  • Classified as probably not a substantial claim.

    Study design and conductcitation

    The precision of the stock composition results was estimated by bootstrapping baseline and mixture data 100 times as implemented by ONCOR.

    “The precision of the stock composition results was estimated by bootstrapping baseline and mixture data (100 times) as implemented by ONCOR (Kalinowski et al. 2007).”
    Quote in the paperSubstantial claim0 of 1 sources checked
    • cites Kalinowski et al. 2007

      Couldn’t be matched to a paper in Crossref, so it can’t be checked.

  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    Estuary restoration activities have expanded rapidly in recent years in an effort to help recover at-risk populations.

    “Estuary restoration activities have expanded rapidly in recent years in an effort to help recover at-risk populations (LCREP 2011).”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites LCREP 2011

      Couldn’t be matched to a paper in Crossref, so it can’t be checked.

    • Rests on an assumption: Questions remain concerning which specific stocks of concern will benefit from estuary restoration efforts.
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisenone given

    Restoration of degraded wetlands intended to improve juvenile rearing opportunities is presently being implemented or planned in many regions of the LCRE.

    “Restoration of degraded wetlands intended to improve juvenile rearing opportunities is presently being implemented or planned in many regions of the LCRE, yet questions remain concerning the benefits of these actions to specific stocks and life history types of salmon.”
    Quote in the paperNot a substantial claim
    • Rests on an assumption: Questions remain concerning which specific stocks of concern will benefit from estuary restoration efforts.
  • May combine two claims.

    Interpretationown data

    Together, abundance, size, and stock data support the premise that many small juvenile Chinook salmon reside and accumulate in shallow, tidal freshwater sites, with larger fish moving down into the estuary.

    “Together, abundance, size, and stock data support the premise that many small juvenile Chinook salmon reside and accumulate in shallow, tidal freshwater sites, with larger fish moving down into the estuary.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationown data

    Our study confirmed that subyearling Chinook salmon were prevalent in shallow-water habitats of the LCRE and identified the life history types and genetic stocks expected to be among the primary beneficiaries of restoration activities along the lower-river migration route.

    “Our study confirmed that subyearling Chinook salmon were prevalent in shallow-water habitats of the LCRE and identified the life history types and genetic stocks expected to be among the primary beneficiaries of restoration activities along the lower-river migration route.”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Interpretationreasoning

    Based on the above examples, one might expect that a fry migrant life history type continues to contribute to Chinook salmon spawner success in the Columbia River basin, especially to the lower-river populations.

    “Based on the above examples, one might expect that a fry migrant life history type continues to contribute to Chinook salmon spawner success in the Columbia River basin, especially to the lower-river populations.”
    Quote in the paperNot a substantial claim
  • Classified as probably not a substantial claim.

    Study design and conductreasoning

    Data for the plots were restricted to assignments made with at least a probability of 0.90 relative to other groups.

    “Data for the plots were restricted to assignments made with at least a probability of 0.90 relative to other groups.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationcitation

    For the summer-fall period, the sources of these fish included cold rivers such as those draining Mt. St. Helens in Washington, where salmon would have later hatch times and reduced growth rates, and this could explain their small size late in the season.

    “For the latter period, the sources of these fish included cold rivers such as those draining Mt.St. Helens in Washington, where salmon would have later hatch times and reduced growth rates (Reimers and Loeffel 1967;Brannon et al. 2004), and this could explain their small size late in the season.”
    Quote in the paperSubstantial claim0 of 2 sources checked
    • cites Reimers and Loeffel 1967
    • cites Brannon et al. 2004 source
  • May combine two claims.

    Interpretationcitation

    Up to 30% of the Chinook salmon measured in these shallow areas were fry, which the authors presume were mostly of natural origin and which have an affinity for shallow, low-velocity environments.

    “Perhaps most significantly, up to 30% of the Chinook salmon measured in these shallow areas were fry, which we presume were mostly of natural origin and which have an affinity for shallow, low-velocity environments (Healey 1980(Healey , 1991)).”
    Quote in the paperSubstantial claim0 of 2 sources checked
    • cites Healey 1980

      Couldn’t be matched to a paper in Crossref, so it can’t be checked.

    • cites Healey 1991

      Couldn’t be matched to a paper in Crossref, so it can’t be checked.

  • May combine two claims.

    Interpretationown data

    Coded wire tag information supported the findings from the genetic stock analysis and proved that there is wide variation in migration timing, rate, and duration within and among hatchery releases.

    “Coded wire tag information supported the findings from the genetic stock analysis and proved that there is wide variation in migration timing, rate, and duration within and among hatchery releases.”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductnone given

    Genetic stock assignments for hatchery Chinook salmon were restricted to those with relative probabilities greater than 0.90.

    “Genetic stock assignments with relative probabilities >0.90 are shown.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Interpretationown data

    The remaining 70% of Chinook salmon were fingerlings and yearlings and probably predominantly of hatchery origin.

    “Based on size at capture and adipose fin clips, 30% of the Chinook salmon were fry and likely of natural origin, while the remaining 70% were fingerlings and yearlings and probably predominantly of hatchery origin.”
    Quote in the paperSubstantial claim
    • Rests on an assumption: Marks or tags, especially adipose fin clips, indicate probable hatchery origin.
  • May combine two claims.

    Study design and conductown data

    Power analyses conducted on the baseline data indicated that excluding individuals with lower probability assignments, approximately 25% of samples, improves overall assignment accuracy and results in only small changes in the stock composition estimates.

    “Power analyses conducted on the baseline data indicated that excluding individuals with lower probability assignments (approximately 25% of our samples) improves overall assignment accuracy and results in only small changes in the stock composition estimates.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationown data

    While most Rogue River fish were sampled in summer and at sites along the Oregon shoreline and many were marked, others captured in spring prior to the summer releases suggest some contribution from natural production sources.

    “While most Rogue River fish were sampled in summer and at sites along the Oregon shoreline and many were marked (indicating that they originated in the enhancement program), others captured in spring prior to the summer releases suggest some contribution from natural production sources.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductnone given

    A much larger marking effort was employed for subyearling Chinook salmon after 2006.

    “A much larger marking effort was employed for subyearling fish after 2006.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Interpretationnone given

    The lower Columbia River and estuary serve as both a migration corridor to the ocean and, for particular stocks, an important habitat for juvenile rearing.

    “The lower Columbia River and estuary serve as both a migration corridor to the ocean and, for particular stocks, an important habitat for juvenile rearing.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationown data

    Based on size at capture, genetics, marks, and coded wire tags, the majority of these fish were hatchery reared, subyearling, fall-run salmon derived from lower-river sources.

    “Based on size at capture, genetics, marks, and coded wire tags, the majority of these fish were hatchery reared, subyearling, fall-run salmon derived from lower-river sources.”
    Quote in the paperSubstantial claim
    • Rests on an assumption: Marks or tags, especially adipose fin clips, indicate probable hatchery origin.
  • May combine two claims.

    Interpretationown data

    Contemporary abundance patterns appear to have shifted to an earlier peak migration in the tidal freshwater zone, while there is a suggestion of a later migration peak in the lower estuary zone at present.

    “This comparison indicated that contemporary abundance patterns appear to have shifted to an earlier peak migration in the tidal freshwater zone, while there is a suggestion of a later migration peak in the lower estuary zone at present (Figure 3).”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductown data

    The 95% confidence intervals for genetic stock composition estimates were derived from 100 bootstrap resamplings of the baseline and mixed-stock genotypes.

    “The range below each estimate is the 95% confidence interval derived from 100 bootstrap resamplings of the baseline and mixed-stock genotypes.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Premisecitation

    Rogue River fish are known to have become naturalized in the Grays River and have perhaps naturalized elsewhere in the Columbia River basin.

    “Rogue River fish are known to have become naturalized in the Grays River, a tributary that enters along the Washington shore of the upper estuary (Roegner et al. 2010) and have perhaps naturalized elsewhere in the Columbia River basin.”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites Roegner et al. 2010 source
  • May combine two claims.

    Interpretationreasoning

    These seasonal shifts in the proportions of West Cascade tributary fall and Spring Creek group fry were similar to those observed for fingerlings, suggesting that the pattern is not simply a result of hatchery operations but rather reflects natural differences between the stocks in migration and habitat use.

    “These seasonal shifts in the proportions of West Cascade tributary fall and Spring Creek group fry were similar to those observed for fingerlings, suggesting that the pattern is not simply a result of hatchery operations but rather reflects natural differences between the stocks in migration and habitat use.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationcitation

    Judging by the high proportion of adipose-fin-clipped fish found in our study, most yearling fish originated in hatcheries, and the observed abundance patterns were likely due to hatchery releases and smolt transportation practices.

    “Judging by the high proportion of adipose-fin-clipped fish found in our study (Table 2), most yearling fish originated in hatcheries, and the observed abundance patterns were likely due to hatchery releases and smolt transportation practices (Ledgerwood et al. 2005).”
    Quote in the paperSubstantial claim0 of 1 sources checked
    • cites Ledgerwood et al. 2005

      Couldn’t be matched to a paper in Crossref, so it can’t be checked.

    • Rests on an assumption: Marks or tags, especially adipose fin clips, indicate probable hatchery origin.
  • May combine two claims.

    Interpretationown data

    While the majority of yearling Chinook salmon move quickly through deep areas of the river inaccessible to beach seines, a proportion of yearlings have a more protracted migration accessing shallow, nearshore habitats and do not travel immediately to the sea.

    “Thus, we concluded that while the majority of yearling Chinook salmon move quickly through deep areas of the river inaccessible to beach seines, a proportion of yearlings have a more protracted migration accessing shallow, nearshore habitats and do not travel immediately to the sea.”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing), S4 (based).

    Interpretationnone given

    These fry are likely naturally spawned salmon.

    “These are likely naturally spawned salmon.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing), S4 (based).

    Interpretationcitation

    This may be a consequence of the higher fry densities found at the semiprotected site at upper Clifton Channel than at the more open area at Jones Beach sampled by Dawley et al. (1985).

    “This may be a consequence of the higher fry densities found at the semiprotected site at upper Clifton Channel than at the more open area at Jones Beach sampled by Dawley et al. (1985).”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites Dawley et al. (1985)

      Couldn’t be matched to a paper in Crossref, so it can’t be checked.

  • May combine two claims.

    Interpretationown data

    Based on size at capture and adipose fin clips, 30% of the Chinook salmon were fry and likely of natural origin.

    “Based on size at capture and adipose fin clips, 30% of the Chinook salmon were fry and likely of natural origin, while the remaining 70% were fingerlings and yearlings and probably predominantly of hatchery origin.”
    Quote in the paperSubstantial claim
    • Rests on an assumption: Marks or tags, especially adipose fin clips, indicate probable hatchery origin.
  • May combine two claims.

    Interpretationown data

    These catches agreed with the genetic data and demonstrated that juveniles from coastal fall stocks can migrate into the Columbia River.

    “These catches again agreed with the genetic data and demonstrated that juveniles from coastal fall stocks can migrate into the Columbia River.”
    Quote in the paperSubstantial claim
110 of 110
  • The authors state this as an assumption.

    The majority of fry-sized Chinook salmon captured were naturally spawned.

    “We assume from hatchery release procedures, which discourage the”
  • The paper relies on this without support.

    Questions remain concerning which specific stocks of concern will benefit from estuary restoration efforts.

    “Restoration of degraded wetlands intended to improve juvenile rearing opportunities is presently being implemented or planned in many regions of the LCRE, yet questions remain concerning the benefits of these actions to specific stocks and life history types of salmon.”
    “However, it is not clear which specific stocks of concern will benefit from these restoration efforts.”
  • The paper relies on this without support.

    Columbia River hatchery release procedures discourage the release of slower-growing fry.

    “We assume from hatchery release procedures, which discourage the”
  • The paper relies on this without support.

    Marks or tags, especially adipose fin clips, indicate probable hatchery origin.

    “Overall, from 2002 to 2007, 16.1% of the Chinook salmon we examined were marked or tagged to indicate a probable hatchery origin.”
    “Judging by the high proportion of adipose-fin-clipped fish found in our study (Table 2), most yearling fish originated in hatcheries, and the observed abundance patterns were likely due to hatchery releases and smolt transportation practices (Ledgerwood et al. 2005).”
  • The paper relies on this without support.

    Genetic stock assignments with probability of 0.90 or greater correctly identify the stock of origin.

    “Although our sample size was small, 26 of 30 genetic stock estimates with assignment probabilities of 0.90 or greater agreed with the origins determined using CWTs (Table 3).”
    “The data for the plots were restricted to individual fish stock assignments made with at least 0.90 probability.”
  • The paper relies on this without support.

    CWT recoveries are representative of the stock composition and migration behavior of the tagged populations.

    “The release information from the tag codes reflected stock compositions similar to those obtained through genetic analysis.”
    “Coded wire tags confirmed genetic source data, which showed that the fingerlings found in shallow-water habitat were primarily from a variety of lower-river hatchery stocks (Table 3; Figure 12).”
6 of 6

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • Wetland prey presence in main channel diets highlights the importance of tidal wetlands as prey sources to the varying Chinook life history patterns in the LCRE.

    “Wetland prey presence in main channel diets highlights the importance of tidal wetlands as prey sources to the varying Chinook life history patterns in the LCRE [20]”

    From Subyearling Chinook salmon diets in Lower Columbia River estuarine habitats (2025) · cites this paper as [20]

    The Consequences for Restoration section (page unavailable) says that wetlands and other shallow-water habitats are used by salmon of varied life history types and that preserving those habitats is important. It does not report wetland prey in main-channel diets or establish tidal wetlands as prey sources; the Methods describe sampling fish distribution rather than diets. (LLM, conf=0.82)

    Experimental — accuracy not yet measured
  • The stock-specific density of juvenile salmon in restoring wetland habitats is a negative function of the distance of the natal stream from the wetland, with proportionally greater representation from local stocks than distant stocks in LCRE wetlands.

    “there is proportionally greater representation from local stocks than more distant stocks in LCRE wetlands (Roegner et al. 2010, 2012, Teel et al. 2014).”

    From Evidence‐based evaluation of the cumulative effects of ecosystem restoration (2016) · cites this paper as Roegner et al. 2012

    Split into 2 atoms — 0 confirmed, 2 partially supported, 0 disputed, 0 misattributed, 0 unverifiable. Expand the claim to see per-atom verdicts.

    Experimental — accuracy not yet measured

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

Each contradiction between two passages listed here was confirmed by an independent check.

  • Summer-fall estuary zone figures are reversed in Table A.2

    Major

    The text assigns 62% West Cascade tributary fall fingerlings to the middle estuary and 52% to the lower estuary. Table A.2 instead labels the row with 0.616 as lower estuary and the row with 0.516 as middle estuary; the upper Columbia and Rogue River figures show the same reversal.

  • A stock estimate lies outside its reported confidence interval

    Minor

    In the all-samples row of Table A.2, the Spring Creek group fall estimate is 0.338, but its reported 95% confidence interval ends at 0.333.

  • The all-samples genetic total excludes the separately listed yearlings

    Minor

    The text says genetic data from 2,174 fish were analyzed, whereas Table A.2 labels 2,138 as "All samples." The difference is exactly the table's 36 yearlings, indicating that the purported all-samples row excludes them.

3 of 3

Cites

Flagged first, then by citations

4 of the 61 references couldn’t be matched to a known paper.

Research works printed but not linked: 8

  1. Craig, 1946, An investigation of fish-maintenance problems in relation to the Willamette Valley project, U.S. Fish and Wildlife Service Special Scientific Report, 33, 74
  2. Healey, 1980, Utilization of the Nanaimo River estuary by juvenile Chinook salmon, Oncorhynchus tshawytscha, U.S. National Marine Fisheries Service Fishery Bulletin, 77, 653
  3. Ledgerwood, 2005, U.S. National Marine Fisheries Service, Report to the U.S. Army Corps of Engineers, Walla Walla District, Contract 56ABNF100030
  4. Milner, 1985, A genetic method of stock identification in mixed populations of Pacific salmon, Oncorhynchus spp, Marine Fisheries Review, 47, 1
  5. Rich, 1920, Early history and seaward migration of Chinook salmon in the Columbia and Sacramento rivers, U.S. Bureau of Fisheries Bulletin, 37, 2
  6. Sather, 2009, Annual Report to the Bonneville Power Administration
  7. Schluchter, 1977, Oregon Department of Fish and Wildlife, 77
  8. Thomas, 1983, Columbia River Estuary Study Taskforce

Cited by

Sorted by citations

Authors
Roegner, G. C., McNatt, R., Teel, D. J., & Bottom, D. L.
Affiliations
NOAA National Marine Fisheries Service (US)
Corresponding author
Roegner, G. Curtis
Venue
Marine and Coastal Fisheries
Published
2012-01-01
Volume
4
Issue
1
Pages
450-472
ISSN
1942-5120 (ISSN-L)
OpenAlex
W2122078638
Cited by
36
References
61
Citations by year
2026: 1 · 2025: 2 · 2024: 1 · 2021: 1 · 2020: 1 · 2019: 2 · 2018: 4 · 2017: 2 · 2016: 6 · 2015: 4 · 2014: 9 · 2013: 3
FWCI
4.89
Type
journal article
Language
en
Open access
Locations
  • Marine and Coastal Fisheries (publishedVersion, cc-by)
  • BioOne Complete (BioOne) (submittedVersion)
Funders
  • U.S. Army Corps of Engineers
  • National Marine Fisheries Service
Topics
  • Physical Sciences › Environmental Science › Nature and Landscape Conservation › Fish Ecology and Management Studies
  • Physical Sciences › Environmental Science › Global and Planetary Change › Marine and fisheries research
  • Life Sciences › Agricultural and Biological Sciences › Aquatic Science › Fish Biology and Ecology Studies
Keywords
juvenile Chinook salmon, Oncorhynchus tshawytscha, Lower Columbia River, Columbia River estuary, shallow-water habitats, hatchery production, migration timing, habitat restoration, coded wire tags

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Claims read by deepseek-v4.1-flash under definition version 3 (extract-v3) on 2026-10-27.

Classified by jev-1.13-20260917 (gold-guideline-v0.2) on 2026-10-27.

Cited sources are checked by gpt-6-sol.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review