The Human Genome Browser at UCSC

Cited by (359)

Items 201–300 of 359

1. cGAS-mediated induction of type I interferon due to inborn errors of histone pre-mRNA processing
   Uggenti, Carolina, Lepelley, Alice, Depp, Marine, Badrock, Andrew P., Rodero, Mathieu P., El-Daher, Marie-Thérèse, Rice, Gillian I., Dhir, Somdutta, Wheeler, Ann P., Dhir, Ashish et al. · 2020 · Nature Genetics
2. Age-related macular degeneration–a genome scan in extended families
   Majewski, Jacek, Schultz, Dennis W., Weleber, Richard G., Schain, Mitchell B., Edwards, Albert O., Matise, Tara C., Acott, Ted S., Ott, Jurg, Klein, Michael L. · 2003 · The American Journal of Human Genetics
3. MicroRNAs 146a/b-5 and 425-3p and 24-3p are markers of antidepressant response and regulate MAPK/Wnt-system genes
   Lopez, Juan Pablo, Fiori, Laura M., Cruceanu, Cristiana, Lin, Rixing, Labonte, Benoit, Cates, Hannah M., Heller, Elizabeth A., Vialou, Vincent, Ku, Stacy M., Gerald, Christophe et al. · 2017 · Nature Communications
4. Speech delay and autism spectrum behaviors are frequently associated with duplication of the 7q11.23 Williams-Beuren syndrome region
   Berg, Jonathan S., Brunetti-Pierri, Nicola, Peters, Sarika U., Kang, Sung-Hae L, Fong, Chin-To, Salamone, Jessica, Freedenberg, Debra, Hannig, Vickie L., Prock, Lisa Albers, Miller, David T. et al. · 2007 · Genetics in Medicine
5. The chromatin regulator Brg1 suppresses formation of intraductal papillary mucinous neoplasm and pancreatic ductal adenocarcinoma
   von Figura, Guido, Fukuda, Akihisa, Roy, Nilotpal, Liku, Muluye E., Morris IV, John P., Kim, Grace E., Russ, Holger A., Firpo, Matthew A., Mulvihill, Sean J., Dawson, David W. et al. · 2014 · Nature Cell Biology
6. Sequencing an Ashkenazi reference panel supports population-targeted personal genomics and illuminates Jewish and European origins
   Carmi, Shai, Hui, Ken Y., Kochav, Ethan, Liu, Xinmin, Xue, James, Grady, Fillan, Guha, Saurav, Upadhyay, Kinnari, Ben-Avraham, Dan, Mukherjee, Semanti et al. · 2014 · Nature Communications
7. Structural variants in genes associated with human Williams-Beuren syndrome underlie stereotypical hypersociability in domestic dogs
   vonHoldt, Bridgett M., Shuldiner, Emily, Koch, Ilana Janowitz, Kartzinel, Rebecca Y., Hogan, Andrew, Brubaker, Lauren, Wanser, Shelby, Stahler, Daniel, Wynne, Clive D. L., Ostrander, Elaine A. et al. · 2017 · Science Advances
8. Depletion of RUNX1/ETO in t(8;21) AML cells leads to genome-wide changes in chromatin structure and transcription factor binding
   Ptasinska, A, Assi, S A, Mannari, D, James, S R, Williamson, D, Dunne, J, Hoogenkamp, M, Wu, M, Care, M, McNeill, H et al. · 2012 · Leukemia
9. Cohesin Disrupts Polycomb-Dependent Chromosome Interactions in Embryonic Stem Cells
   Rhodes, James D.P., Feldmann, Angelika, Hernández-Rodríguez, Benjamín, Díaz, Noelia, Brown, Jill M., Fursova, Nadezda A., Blackledge, Neil P., Prathapan, Praveen, Dobrinic, Paula, Huseyin, Miles K. et al. · 2020 · Cell Reports
10. Childhood maternal care is associated with DNA methylation of the genes for brain-derived neurotrophic factor ( <i>BDNF</i> ) and oxytocin receptor ( <i>OXTR</i> ) in peripheral blood cells in adult men and women
    Unternaehrer, Eva, Meyer, Andrea Hans, Burkhardt, Susan C. A., Dempster, Emma, Staehli, Simon, Theill, Nathan, Lieb, Roselind, Meinlschmidt, Gunther · 2015 · Stress
11. Single-cell chromatin accessibility landscape identifies tissue repair program in human regulatory T cells
    Delacher, Michael, Simon, Malte, Sanderink, Lieke, Hotz-Wagenblatt, Agnes, Wuttke, Marina, Schambeck, Kathrin, Schmidleithner, Lisa, Bittner, Sebastian, Pant, Asmita, Ritter, Uwe et al. · 2021 · Immunity
12. Cas9-specific immune responses compromise local and systemic AAV CRISPR therapy in multiple dystrophic canine models
    Hakim, Chady H., Kumar, Sandeep R. P., Pérez-López, Dennis O., Wasala, Nalinda B., Zhang, Dong, Yue, Yongping, Teixeira, James, Pan, Xiufang, Zhang, Keqing, Million, Emily D. et al. · 2021 · Nature Communications
13. DNA methylation in lung cells is associated with asthma endotypes and genetic risk
    Nicodemus-Johnson, Jessie, Myers, Rachel A., Sakabe, Noburu J., Sobreira, Debora R., Hogarth, Douglas K., Naureckas, Edward T., Sperling, Anne I., Solway, Julian, White, Steven R., Nobrega, Marcelo A. et al. · 2016 · JCI Insight
14. Resolving rates of mutation in the brain using single-neuron genomics
    Evrony, Gilad D, Lee, Eunjung, Park, Peter J, Walsh, Christopher A · 2016 · eLife
15. Microcephaly gene links trithorax and REST/NRSF to control neural stem cell proliferation and differentiation
    Yang, Yawei J., Baltus, Andrew E., Mathew, Rebecca S., Murphy, Elisabeth A., Evrony, Gilad D., Gonzalez, Dilenny M., Wang, Estee P., Marshall-Walker, Christine A., Barry, Brenda J., Murn, Jernej et al. · 2012 · Cell
16. Genetic mapping of canine fear and aggression
    Zapata, Isain, Serpell, James A., Alvarez, Carlos E. · 2016 · BMC Genomics
17. Genome-scale high-resolution mapping of activating and repressive nucleotides in regulatory regions
    Ernst, Jason, Melnikov, Alexandre, Zhang, Xiaolan, Wang, Li, Rogov, Peter, Mikkelsen, Tarjei S, Kellis, Manolis · 2016 · Nature Biotechnology
18. Global reorganisation of cis-regulatory units upon lineage commitment of human embryonic stem cells
    Freire-Pritchett, Paula, Schoenfelder, Stefan, Várnai, Csilla, Wingett, Steven W, Cairns, Jonathan, Collier, Amanda J, García-Vílchez, Raquel, Furlan-Magaril, Mayra, Osborne, Cameron S, Fraser, Peter et al. · 2017 · eLife
19. Causal associations between modifiable risk factors and the Alzheimer's phenome
    Andrews, Shea J., Fulton‐Howard, Brian, O'Reilly, Paul, Marcora, Edoardo, Goate, Alison M., collaborators of the Alzheimer's Disease Genetics Consortium · 2021 · Annals of Neurology
20. Early nurture epigenetically tunes the oxytocin receptor
    Perkeybile, Allison M., Carter, C. Sue, Wroblewski, Kelly L., Puglia, Meghan H., Kenkel, William M., Lillard, Travis S., Karaoli, Themistoclis, Gregory, Simon G., Mohammadi, Niaz, Epstein, Larissa et al. · 2019 · Psychoneuroendocrinology
21. Low Dimensionality in Gene Expression Data Enables the Accurate Extraction of Transcriptional Programs from Shallow Sequencing
    Heimberg, Graham, Bhatnagar, Rajat, El-Samad, Hana, Thomson, Matt · 2016 · Cell Systems
22. Independent Susceptibility Markers for Atrial Fibrillation on Chromosome 4q25
    Lubitz, Steven A., Sinner, Moritz F., Lunetta, Kathryn L., Makino, Seiko, Pfeufer, Arne, Rahman, Rosanna, Veltman, Caroline E., Barnard, John, Bis, Joshua C., Danik, Stephan P. et al. · 2010 · Circulation
23. DNA language models are powerful predictors of genome-wide variant effects
    Benegas, Gonzalo, Batra, Sanjit Singh, Song, Yun S. · 2023 · Proceedings of the National Academy of Sciences
24. Sex-Specific Role for the Long Non-coding RNA LINC00473 in Depression
    Issler, Orna, van der Zee, Yentl Y., Ramakrishnan, Aarthi, Wang, Junshi, Tan, Chunfeng, Loh, Yong-Hwee E., Purushothaman, Immanuel, Walker, Deena M., Lorsch, Zachary S., Hamilton, Peter J. et al. · 2020 · Neuron
25. Experimental intrauterine growth restriction induces alterations in DNA methylation and gene expression in pancreatic islets of rats
    Thompson, Reid F., Fazzari, Melissa J., Niu, Hongshun, Barzilai, Nir, Simmons, Rebecca A., Greally, John M. · 2010 · Journal of Biological Chemistry
26. Single-cell ATAC sequencing analysis: From data preprocessing to hypothesis generation
    Baek, Seungbyn, Lee, Insuk · 2020 · Computational and Structural Biotechnology Journal
27. The BLUEPRINT Data Analysis Portal
    Fernández, José María, de la Torre, Victor, Richardson, David, Royo, Romina, Puiggròs, Montserrat, Moncunill, Valentí, Fragkogianni, Stamatina, Clarke, Laura, Flicek, Paul, Rico, Daniel et al. · 2016 · Cell Systems
28. Genome-wide analysis reveals novel genes influencing temporal lobe structure with relevance to neurodegeneration in Alzheimer’s disease
    Stein, Jason L., Hua, Xue, Morra, Jonathan H., Lee, Suh, Hibar, Derrek P., Ho, April J., Leow, Alex D., Toga, Arthur W., Sul, Jae Hoon, Kang, Hyun Min et al. · 2010 · NeuroImage
29. Placing the HIRA Histone Chaperone Complex in the Chromatin Landscape
    Pchelintsev, Nikolay A., McBryan, Tony, Rai, Taranjit Singh, van Tuyn, John, Ray-Gallet, Dominique, Almouzni, Geneviève, Adams, Peter D. · 2013 · Cell Reports
30. Cross-Regulation between an Alternative Splicing Activator and a Transcription Repressor Controls Neurogenesis
    Raj, Bushra, O'Hanlon, Dave, Vessey, John P., Pan, Qun, Ray, Debashish, Buckley, Noel J., Miller, Freda D., Blencowe, Benjamin J. · 2011 · Molecular Cell
31. Adaptively introgressed Neandertal haplotype at the OAS locus functionally impacts innate immune responses in humans
    Sams, Aaron J., Dumaine, Anne, Nédélec, Yohann, Yotova, Vania, Alfieri, Carolina, Tanner, Jerome E., Messer, Philipp W., Barreiro, Luis B. · 2016 · Genome Biology
32. Functional differences between mesenchymal stem cell populations are reflected by their transcriptome
    Jansen, Bastiaan J.H., Gilissen, Christian, Roelofs, Helene, Schaap-Oziemlak, Aneta, Veltman, Joris A., Raymakers, Reinier A.P., Jansen, Joop H., Kögler, Gesine, Figdor, Carl G., Torensma, Ruurd et al. · 2010 · Stem Cells and Development
33. Odd skipped-related 1 identifies a population of embryonic fibro-adipogenic progenitors regulating myogenesis during limb development
    Vallecillo-García, Pedro, Orgeur, Mickael, vom Hofe-Schneider, Sophie, Stumm, Jürgen, Kappert, Verena, Ibrahim, Daniel M., Börno, Stefan T., Hayashi, Shinichiro, Relaix, Frédéric, Hildebrandt, Katrin et al. · 2017 · Nature Communications
34. Identification of Arx transcriptional targets in the developing basal forebrain
    Fulp, Carl T., Cho, Ginam, Marsh, Eric D., Nasrallah, Ilya M., Labosky, Patricia A., Golden, Jeffrey A. · 2008 · Human Molecular Genetics
35. Heterogeneity and interplay of the extracellular vesicle small RNA transcriptome and proteome
    Sork, Helena, Corso, Giulia, Krjutskov, Kaarel, Johansson, Henrik J., Nordin, Joel Z., Wiklander, Oscar P. B., Lee, Yi Xin Fiona, Westholm, Jakub Orzechowski, Lehtiö, Janne, Wood, Matthew J. A. et al. · 2018 · Scientific Reports
36. High-Resolution Epigenomic Atlas of Human Embryonic Craniofacial Development
    Wilderman, Andrea, VanOudenhove, Jennifer, Kron, Jeffrey, Noonan, James P., Cotney, Justin · 2018 · Cell Reports
37. Exploration of databases and methods supporting drug repurposing: a comprehensive survey
    Tanoli, Ziaurrehman, Seemab, Umair, Scherer, Andreas, Wennerberg, Krister, Tang, Jing, Vähä-Koskela, Markus · 2021 · Briefings in Bioinformatics
38. Discovery and mass spectrometric analysis of novel splice-junction peptides using RNA-Seq
    Sheynkman, Gloria M., Shortreed, Michael R., Frey, Brian L., Smith, Lloyd M. · 2013 · Molecular &amp; Cellular Proteomics
39. Early life experience drives structural variation of neural genomes in mice
    Bedrosian, Tracy A., Quayle, Carolina, Novaresi, Nicole, Gage, Fred. H. · 2018 · Science
40. Rescuing Over-activated Microglia Restores Cognitive Performance in Juvenile Animals of the Dp(16) Mouse Model of down Syndrome.
    Pinto, Bruno, Morelli, Giovanni, Rastogi, Mohit, Savardi, Annalisa, Fumagalli, Amos, Petretto, Andrea, Bartolucci, Martina, Varea, Emilio, Catelani, Tiziano, Contestabile, Andrea et al. · 2020 · Neuron
41. Expectations and blind spots for structural variation detection from long-read assemblies and short-read genome sequencing technologies
    Zhao, Xuefang, Collins, Ryan L., Lee, Wan-Ping, Weber, Alexandra M., Jun, Yukyung, Zhu, Qihui, Weisburd, Ben, Huang, Yongqing, Audano, Peter A., Wang, Harold et al. · 2021 · The American Journal of Human Genetics
42. Genetic Markers of Human Evolution Are Enriched in Schizophrenia
    Srinivasan, Saurabh, Bettella, Francesco, Mattingsdal, Morten, Wang, Yunpeng, Witoelar, Aree, Schork, Andrew J., Thompson, Wesley K., Zuber, Verena, Winsvold, Bendik S., Zwart, John-Anker et al. · 2016 · Biological Psychiatry
43. Reprogramming the Chromatin Landscape: Interplay of the Estrogen and Glucocorticoid Receptors at the Genomic Level
    Miranda, Tina B., Voss, Ty C., Sung, Myong-Hee, Baek, Songjoon, John, Sam, Hawkins, Mary, Grøntved, Lars, Schiltz, R. Louis, Hager, Gordon L. · 2013 · Cancer Research
44. Epigenetic modifications of the glucocorticoid receptor gene are associated with the vulnerability to psychopathology in childhood maltreatment
    Radtke, K M, Schauer, M, Gunter, H M, Ruf-Leuschner, M, Sill, J, Meyer, A, Elbert, T · 2015 · Translational Psychiatry
45. Reference-assisted chromosome assembly
    Kim, Jaebum, Larkin, Denis M., Cai, Qingle, Asan, Zhang, Yongfen, Ge, Ri-Li, Auvil, Loretta, Capitanu, Boris, Zhang, Guojie, Lewin, Harris A. et al. · 2013 · Proceedings of the National Academy of Sciences
46. Refinement of the androgen response element based on ChIP-seq in androgen-insensitive and androgen-responsive prostate cancer cell lines
    Wilson, Stephen, Qi, Jianfei, Filipp, Fabian V. · 2016 · Scientific Reports
47. Genome-Wide Scan for Selection Signatures in Six Cattle Breeds in South Africa
    Makina, Sithembile O., Muchadeyi, Farai C., van Marle-Köster, Este, Taylor, Jerry F., Makgahlela, Mahlako L., Maiwashe, Azwihangwisi · 2015 · Genetics Selection Evolution
48. Transcriptional cofactors display specificity for distinct types of core promoters
    Haberle, Vanja, Arnold, Cosmas D., Pagani, Michaela, Rath, Martina, Schernhuber, Katharina, Stark, Alexander · 2019 · Nature
49. Biased clustered substitutions in the human genome: The footprints of male-driven biased gene conversion
    Dreszer, Timothy R., Wall, Gregory D., Haussler, David, Pollard, Katherine S. · 2007 · Genome Research
50. Cell-Selective Adeno-Associated Virus-Mediated <i>SCN1A</i> Gene Regulation Therapy Rescues Mortality and Seizure Phenotypes in a Dravet Syndrome Mouse Model and Is Well Tolerated in Nonhuman Primates
    Tanenhaus, Annie, Stowe, Timothy, Young, Andrew, McLaughlin, John, Aeran, Rangoli, Lin, I. Winnie, Li, Jianmin, Hosur, Raghavendra, Chen, Ming, Leedy, Jennifer et al. · 2022 · Human Gene Therapy
51. Three-dimensional genome rewiring in loci with human accelerated regions
    Keough, Kathleen C., Whalen, Sean, Inoue, Fumitaka, Przytycki, Pawel F., Fair, Tyler, Deng, Chengyu, Steyert, Marilyn, Ryu, Hane, Lindblad-Toh, Kerstin, Karlsson, Elinor et al. · 2023 · Science
52. Non-coding variability at the APOE locus contributes to the Alzheimer’s risk
    Zhou, Xiaopu, Chen, Yu, Mok, Kin Y., Kwok, Timothy C. Y., Mok, Vincent C. T., Guo, Qihao, Ip, Fanny C., Chen, Yuewen, Mullapudi, Nandita, Alzheimer’s Disease Neuroimaging Initiative et al. · 2019 · Nature Communications
53. MLV integration site selection is driven by strong enhancers and active promoters
    LaFave, Matthew C., Varshney, Gaurav K., Gildea, Derek E., Wolfsberg, Tyra G., Baxevanis, Andreas D., Burgess, Shawn M. · 2014 · Nucleic Acids Research
54. Genome-wide prediction of transcription factor binding sites using an integrated model
    Won, Kyoung-Jae, Ren, Bing, Wang, Wei · 2010 · Genome Biology
55. The Brain-Enriched MicroRNA miR-9-3p Regulates Synaptic Plasticity and Memory
    Sim, Su-Eon, Lim, Chae-Seok, Kim, Jae-Ick, Seo, Daekwan, Chun, Heejung, Yu, Nam-Kyung, Lee, Jaehyun, Kang, SukJae Joshua, Ko, Hyoung-Gon, Choi, Jun-Hyeok et al. · 2016 · The Journal of Neuroscience
56. Active DNA demethylation promotes cell fate specification and the DNA damage response
    Wang, Dongpeng, Wu, Wei, Callen, Elsa, Pavani, Raphael, Zolnerowich, Nicholas, Kodali, Srikanth, Zong, Dali, Wong, Nancy, Noriega, Santiago, Nathan, William J. et al. · 2022 · Science
57. Proteogenomic analysis of human cerebrospinal fluid identifies neurologically relevant regulation and implicates causal proteins for Alzheimer’s disease
    Western, Daniel, Timsina, Jigyasha, Wang, Lihua, Wang, Ciyang, Yang, Chengran, Phillips, Bridget, Wang, Yueyao, Liu, Menghan, Ali, Muhammad, Beric, Aleksandra et al. · 2024 · Nature Genetics
58. Comparative analyses of CTCF and BORIS occupancies uncover two distinct classes of CTCF binding genomic regions
    Pugacheva, Elena M., Rivero-Hinojosa, Samuel, Espinoza, Celso A., Méndez-Catalá, Claudia Fabiola, Kang, Sungyun, Suzuki, Teruhiko, Kosaka-Suzuki, Natsuki, Robinson, Susan, Nagarajan, Vijayaraj, Ye, Zhen et al. · 2015 · Genome biology
59. Benchmark analysis of algorithms for determining and quantifying full-length mRNA splice forms from RNA-seq data
    Hayer, Katharina E., Pizarro, Angel, Lahens, Nicholas F., Hogenesch, John B., Grant, Gregory R. · 2015 · Bioinformatics
60. Lower Placental Leptin Promoter Methylation in Association with Fine Particulate Matter Air Pollution during Pregnancy and Placental Nitrosative Stress at Birth in the ENVIR <i>ON</i> AGE Cohort
    Saenen, Nelly D., Vrijens, Karen, Janssen, Bram G., Roels, Harry A., Neven, Kristof Y., Vanden Berghe, Wim, Gyselaers, Wilfried, Vanpoucke, Charlotte, Lefebvre, Wouter, De Boever, Patrick et al. · 2017 · Environmental Health Perspectives
61. Ten new cases further delineate the syndromic intellectual disability phenotype caused by mutations in DYRK1A
    Bronicki, Lucas M, Redin, Claire, Drunat, Severine, Piton, Amélie, Lyons, Michael, Passemard, Sandrine, Baumann, Clarisse, Faivre, Laurence, Thevenon, Julien, Rivière, Jean-Baptiste et al. · 2015 · European Journal of Human Genetics
62. HINCUTs in cancer: Hypoxia-induced noncoding ultraconserved transcripts
    Ferdin, J, Nishida, N, Wu, X, Nicoloso, M S, Shah, M Y, Devlin, C, Ling, H, Shimizu, M, Kumar, K, Cortez, M A et al. · 2013 · Cell Death &amp; Differentiation
63. Many LINE1 elements contribute to the transcriptome of human somatic cells
    Rangwala, Sanjida H, Zhang, Lili, Kazazian, Haig H · 2009 · Genome Biology
64. Adeno-associated Virus Genome Population Sequencing Achieves Full Vector Genome Resolution and Reveals Human-Vector Chimeras
    Tai, Phillip W.L., Xie, Jun, Fong, Kaiyuen, Seetin, Matthew, Heiner, Cheryl, Su, Qin, Weiand, Michael, Wilmot, Daniella, Zapp, Maria L., Gao, Guangping · 2018 · Molecular Therapy - Methods &amp; Clinical Development
65. A Genome-wide Comparison of the Functional Properties of Rare and Common Genetic Variants in Humans
    Zhu, Qianqian, Ge, Dongliang, Maia, Jessica M., Zhu, Mingfu, Petrovski, Slave, Dickson, Samuel P., Heinzen, Erin L., Shianna, Kevin V., Goldstein, David B. · 2011 · The American Journal of Human Genetics
66. DNA methylation and substance-use risk: a prospective, genome-wide study spanning gestation to adolescence
    Cecil, C A M, Walton, E, Smith, R G, Viding, E, McCrory, E J, Relton, C L, Suderman, M, Pingault, J-B, McArdle, W, Gaunt, T R et al. · 2016 · Translational Psychiatry
67. SCAMP5, NBEA and AMISYN: three candidate genes for autism involved in secretion of large dense-core vesicles
    Castermans, Dries, Volders, Karolien, Crepel, An, Backx, Liesbeth, De Vos, Rita, Freson, Kathleen, Meulemans, Sandra, Vermeesch, Joris R., Schrander-Stumpel, Connie T.R.M., De Rijk, Peter et al. · 2010 · Human Molecular Genetics
68. Massively parallel quantification of the regulatory effects of noncoding genetic variation in a human cohort
    Vockley, Christopher M., Guo, Cong, Majoros, William H., Nodzenski, Michael, Scholtens, Denise M., Hayes, M. Geoffrey, Lowe, William L., Reddy, Timothy E. · 2015 · Genome Research
69. Evolutionary history and adaptation of a human pygmy population of Flores Island, Indonesia
    Tucci, Serena, Vohr, Samuel H., McCoy, Rajiv C., Vernot, Benjamin, Robinson, Matthew R., Barbieri, Chiara, Nelson, Brad J., Fu, Wenqing, Purnomo, Gludhug A., Sudoyo, Herawati et al. · 2018 · Science
70. Large epigenome-wide association study of childhood ADHD identifies peripheral DNA methylation associated with disease and polygenic risk burden
    Mooney, Michael A., Ryabinin, Peter, Wilmot, Beth, Bhatt, Priya, Mill, Jonathan, Nigg, Joel T. · 2020 · Translational Psychiatry
71. Optimizing prediction of response to antidepressant medications using machine learning and integrated genetic, clinical, and demographic data
    Taliaz, Dekel, Spinrad, Amit, Barzilay, Ran, Barnett-Itzhaki, Zohar, Averbuch, Dana, Teltsh, Omri, Schurr, Roy, Darki-Morag, Sne, Lerer, Bernard · 2021 · Translational Psychiatry
72. Association of a common genetic variant with Parkinson’s disease is mediated by microglia
    Langston, Rebekah G., Beilina, Alexandra, Reed, Xylena, Kaganovich, Alice, Singleton, Andrew B., Blauwendraat, Cornelis, Gibbs, J. Raphael, Cookson, Mark R. · 2022 · Science Translational Medicine
73. p53 activates the PANK1/ miRNA-107 gene leading to downregulation of CDK6 and p130 cell cycle proteins
    Böhlig, Levin, Friedrich, Maik, Engeland, Kurt · 2011 · Nucleic Acids Research
74. Transcriptome of embryonic and neonatal mouse cortex by high-throughput RNA sequencing
    Han, Xinwei, Wu, Xia, Chung, Wen-Yu, Li, Tao, Nekrutenko, Anton, Altman, Naomi S., Chen, Gong, Ma, Hong · 2009 · Proceedings of the National Academy of Sciences
75. Waves of genomic hitchhikers shed light on the evolution of gamebirds (Aves: Galliformes)
    Kriegs, Jan, Matzke, Andreas, Churakov, Gennady, Kuritzin, Andrej, Mayr, Gerald, Brosius, Jürgen, Schmitz, Jürgen · 2007 · BMC Evolutionary Biology
76. The Evf2 ultraconserved enhancer lncRNA functionally and spatially organizes megabase distant genes in the developing forebrain
    Cajigas, Ivelisse, Chakraborty, Abhijit, Swyter, Kelsey R., Luo, Hao, Bastidas, Monique, Nigro, Maximilliano, Morris, Elizabeth R., Chen, Sean, VanGompel, Michael J.W., Leib, David et al. · 2018 · Molecular Cell
77. MicroRNA 7 Impairs Insulin Signaling and Regulates A <i>β</i> Levels through Posttranscriptional Regulation of the Insulin Receptor Substrate 2, Insulin Receptor, Insulin-Degrading Enzyme, and Liver X Receptor Pathway
    Fernández-de Frutos, Mario, Galán-Chilet, Inmaculada, Goedeke, Leigh, Kim, Byungwook, Pardo-Marqués, Virginia, Pérez-García, Ana, Herrero, J. Ignacio, Fernández-Hernando, Carlos, Kim, Jungsu, Ramírez, Cristina M. · 2019 · Molecular and Cellular Biology
78. Coordinated transcriptional and catabolic programs support iron-dependent adaptation to RAS-MAPK pathway inhibition in pancreatic cancer
    Ravichandran, Mirunalini, Hu, Jingjie, Cai, Charles, Ward, Nathan P., Venida, Anthony, Foakes, Callum, Kuljanin, Miljan, Yang, Annan, Hennessey, Connor J., Yang, Yang et al. · 2022 · Cancer Discovery
79. A proteogenomics approach integrating proteomics and ribosome profiling increases the efficiency of protein identification and enables the discovery of alternative translation start sites
    Koch, Alexander, Gawron, Daria, Steyaert, Sandra, Ndah, Elvis, Crappé, Jeroen, De Keulenaer, Sarah, De Meester, Ellen, Ma, Ming, Shen, Ben, Gevaert, Kris et al. · 2014 · PROTEOMICS
80. Integrated analysis of behavioral, epigenetic, and gut microbiome analyses in AppNL-G-F, AppNL-F, and wild type mice
    Kundu, Payel, Torres, Eileen Ruth S., Stagaman, Keaton, Kasschau, Kristin, Okhovat, Mariam, Holden, Sarah, Ward, Samantha, Nevonen, Kimberly A., Davis, Brett A., Saito, Takashi et al. · 2021 · Scientific Reports
81. A potential endophenotype for Alzheimer's disease: cerebrospinal fluid clusterin
    Deming, Yuetiva, Xia, Jian, Cai, Yefei, Lord, Jenny, Holmans, Peter, Bertelsen, Sarah, Holtzman, David, Morris, John C., Bales, Kelly, Pickering, Eve H. et al. · 2016 · Neurobiology of Aging
82. Analysis and benchmarking of small and large genomic variants across tandem repeats
    English, Adam C., Dolzhenko, Egor, Ziaei Jam, Helyaneh, McKenzie, Sean K., Olson, Nathan D., De Coster, Wouter, Park, Jonghun, Gu, Bida, Wagner, Justin, Eberle, Michael A. et al. · 2025 · Nature Biotechnology
83. Meta-analysis of primary target genes of peroxisome proliferator-activated receptors
    Heinäniemi, Merja, Uski, J Oskari, Degenhardt, Tatjana, Carlberg, Carsten · 2007 · Genome Biology
84. Community-wide genome sequencing reveals 30 years of Darwin’s finch evolution
    Enbody, Erik D., Sendell-Price, Ashley T., Sprehn, C. Grace, Rubin, Carl-Johan, Visscher, Peter M., Grant, B. Rosemary, Grant, Peter R., Andersson, Leif · 2023 · Science
85. DNA methylation signatures in panic disorder
    Iurato, Stella, Carrillo-Roa, Tania, Arloth, Janine, Czamara, Darina, Diener-Hölzl, Laura, Lange, Jennifer, Müller-Myhsok, Bertram, Binder, Elisabeth B., Erhardt, Angelika · 2017 · Translational Psychiatry
86. A demonstration of conservation genomics for threatened species management
    Wright, Belinda R., Farquharson, Katherine A., McLennan, Elspeth A., Belov, Katherine, Hogg, Carolyn J., Grueber, Catherine E. · 2020 · Molecular Ecology Resources
87. A plate-based single-cell ATAC-seq workflow for fast and robust profiling of chromatin accessibility
    Xu, Wei, Wen, Yi, Liang, Yingying, Xu, Qiushi, Wang, Xuefei, Jin, Wenfei, Chen, Xi · 2021 · Nature Protocols
88. DNA methylation and transcriptional trajectories during human development and reprogramming of isogenic pluripotent stem cells
    Roost, Matthias S., Slieker, Roderick C., Bialecka, Monika, van Iperen, Liesbeth, Gomes Fernandes, Maria M., He, Nannan, Suchiman, H. Eka D., Szuhai, Karoly, Carlotti, Françoise, de Koning, Eelco J. P. et al. · 2017 · Nature Communications
89. Hand Factors in Cardiac Development
    George, Rajani M., Firulli, Anthony B. · 2019 · The Anatomical Record
90. Sensitive detection of chromatin-altering polymorphisms reveals autoimmune disease mechanisms
    del Rosario, Ricardo Cruz-Herrera, Poschmann, Jeremie, Rouam, Sigrid Laure, Png, Eileen, Khor, Chiea Chuen, Hibberd, Martin Lloyd, Prabhakar, Shyam · 2015 · Nature Methods
91. Functional characterization of tissue-specific enhancers in the DLX5/6 locus
    Birnbaum, Ramon Y., Everman, David B., Murphy, Karl K., Gurrieri, Fiorella, Schwartz, Charles E., Ahituv, Nadav · 2012 · Human Molecular Genetics
92. Functional characterization of enhancer evolution in the primate lineage
    Klein, Jason C., Keith, Aidan, Agarwal, Vikram, Durham, Timothy, Shendure, Jay · 2018 · Genome Biology
93. Genetic variation in the oxytocin receptor (OXTR) gene is associated with Asperger Syndrome
    Di Napoli, Agnese, Warrier, Varun, Baron-Cohen, Simon, Chakrabarti, Bhismadev · 2014 · Molecular Autism
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