Cited by 173

The DOI matches its Crossref record; 43 of the 43 references it cites were found in a registry or an index.

Lysosome: The metabolic signaling hub

Lamming, Dudley W., Bar‐Peled, Liron·2019·Traffic

Abstract

For the past five decades, the lysosome has been characterized as an unglamorous cellular recycling center. This notion has undergone a radical shift in the last 10 years, with new research revealing that this organelle serves as a major hub for metabolic signaling pathways. The discovery that master growth regulators, including the protein kinase mTOR (mechanistic target of rapamycin), make their home at the lysosomal surface has generated intense interest in the lysosome's key role in nutrient sensing and cellular homeostasis. The transcriptional networks required for lysosomal maintenance and function are just being unraveled and their connection to lysosome‐based signaling pathways revealed. The catabolic and anabolic pathways that converge on the lysosome connect this organelle with multiple facets of cellular function; when these pathways are deregulated they underlie multiple human diseases, and promote cellular and organismal aging. Thus, understanding how lysosome‐based signaling pathways function will not only illuminate the fascinating biology of this organelle but will also be critical in unlocking its therapeutic potentials.

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1111/tra.12617

Cites

43 of 43 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • mTORC1 is regulated by nutrients and hormonal cues, notably amino acids, glucose, oxygen, and cholesterol.

    “mTORC1 is regulated by a wide range of nutrients and hormonal cues, most notably the availability of amino acids, but also glucose, oxygen, and cholesterol 1–3.”

    From Targeting the biology of aging with mTOR inhibitors (2023) · cites this paper as [3]

    In “Metabolic signaling at the lysosomal surface” (page not provided), the paper says mTORC1 integrates hormonal cues and senses amino acids, glucose, and cholesterol; it also emphasizes its sensitivity to amino acids. The paper does not identify oxygen availability as an mTORC1 regulatory cue. A search for oxygen found it only in a reference title about oxygen-glucose deprivation, not in the paper’s account of mTORC1 regulation. (LLM, conf=0.88)

    Experimental — accuracy not yet measured

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Flagged first, then by citations

Research works printed but not linked: 154

  1. 10.1083/jcb.91.3.66s · DOI
  2. 10.1038/ncb0905-847 · DOI
  3. 10.1083/jcb.9.4.773 · DOI
  4. Straus W, 1954, Isolation and biochemical properties of droplets from the cells of rat kidney, J Biol Chem, 207, 745, 10.1016/S0021-9258(18)65693-5 · DOI
  5. 10.1038/nrm2272 · DOI
  6. 10.1038/nrm3565 · DOI
  7. 10.1146/annurev-cellbio-111315-125125 · DOI
  8. 10.1002/path.3021 · DOI
  9. 10.1101/sqb.2016.81.030981 · DOI
  10. 10.1073/pnas.1716173114 · DOI
  11. 10.3233/NHA-180045 · DOI
  12. 10.1038/369756a0 · DOI · Paper page
  13. 10.1016/0092-8674(94)90570-3 · DOI · Paper page
  14. 10.1016/S0092-8674(02)00808-5 · DOI
  15. 10.1016/S1097-2765(03)00114-X · DOI
  16. 10.1016/S0092-8674(02)00833-4 · DOI
  17. 10.1016/j.cmet.2016.05.009 · DOI · Paper page
  18. 10.1038/ncb1183 · DOI
  19. 10.1016/j.cub.2004.06.054 · DOI · Paper page
  20. 10.1016/j.cub.2006.08.001 · DOI
  21. 10.1038/ncb999 · DOI
  22. 10.1677/ERC-06-0091 · DOI
  23. 10.1186/2193-1801-3-735 · DOI · Paper page
  24. 10.1016/S0303-7207(99)00121-5 · DOI
  25. 10.1126/science.1196371 · DOI · Paper page
  26. 10.1074/jbc.272.42.26457 · DOI
  27. 10.1126/science.1236566 · DOI
  28. 10.1158/2159-8290.CD-15-0460 · DOI
  29. 10.1194/jlr.M028787 · DOI
  30. 10.1016/j.cell.2011.02.014 · DOI
  31. 10.1038/emboj.2008.119 · DOI
  32. 10.1016/j.cell.2015.02.041 · DOI
  33. 10.1016/j.cell.2017.09.046 · DOI
  34. 10.1126/science.aan6298 · DOI
  35. 10.1242/jcs.111.1.11 · DOI
  36. 10.1074/jbc.M004389200 · DOI
  37. 10.1126/science.1157535 · DOI · Paper page
  38. 10.1016/j.molcel.2005.05.020 · DOI
  39. 10.4161/cc.26000 · DOI
  40. 10.1016/j.jmb.2010.07.034 · DOI · Paper page
  41. 10.1016/j.molcel.2017.10.016 · DOI
  42. 10.1038/s41467-017-01567-4 · DOI
  43. 10.1038/emboj.2012.252 · DOI
  44. 10.1038/nm1528 · DOI
  45. 10.1016/j.celrep.2013.07.030 · DOI · Paper page
  46. 10.1016/j.devcel.2014.03.017 · DOI
  47. 10.1126/science.1095291 · DOI
  48. 10.1126/scisignal.2004112 · DOI · Paper page
  49. 10.1038/nature21423 · DOI
  50. 10.1038/nature21378 · DOI · Paper page
  51. 10.1016/j.molcel.2013.09.016 · DOI · Paper page
  52. 10.1083/jcb.201712177 · DOI · Paper page
  53. 10.1371/journal.pone.0157100 · DOI
  54. 10.1074/jbc.M116.719997 · DOI
  55. 10.1016/j.celrep.2014.09.014 · DOI · Paper page
  56. 10.1016/j.celrep.2014.10.019 · DOI · Paper page
  57. 10.1016/j.cell.2014.08.038 · DOI · Paper page
  58. 10.1126/scisignal.aah4497 · DOI
  59. 10.1038/ncomms10025 · DOI
  60. 10.1038/nature19079 · DOI · Paper page
  61. 10.1126/science.1257132 · DOI
  62. 10.1126/science.aao3265 · DOI
  63. 10.1096/fj.201701211R · DOI
  64. 10.1111/nyas.13687 · DOI
  65. 10.1038/s41598-017-10381-3 · DOI
  66. 10.1016/j.yfrne.2017.12.002 · DOI
  67. 10.1016/j.mad.2018.07.004 · DOI
  68. 10.1016/j.molcel.2012.05.043 · DOI
  69. 10.1016/j.molcel.2016.08.016 · DOI
  70. 10.1016/j.molcel.2012.06.009 · DOI · Paper page
  71. 10.1038/ncb839 · DOI · Paper page
  72. 10.1016/S0092-8674(03)00929-2 · DOI · Paper page
  73. 10.1016/j.cell.2005.02.031 · DOI · Paper page
  74. 10.1016/j.cell.2006.06.055 · DOI · Paper page
  75. 10.1016/j.cell.2007.05.058 · DOI
  76. 10.1007/s11357-017-9997-3 · DOI
  77. 10.1016/j.cell.2013.11.049 · DOI · Paper page
  78. 10.1016/j.cell.2014.01.024 · DOI
  79. 10.1073/pnas.1302455110 · DOI · Paper page
  80. 10.4049/jimmunol.1701712 · DOI
  81. 10.1096/fj.13-237743 · DOI
  82. 10.1016/j.celrep.2015.03.010 · DOI
  83. 10.1073/pnas.1318676110 · DOI
  84. 10.1016/j.molcel.2017.05.030 · DOI
  85. 10.1016/j.cmet.2013.08.002 · DOI
  86. 10.1126/science.1228792 · DOI · Paper page
  87. 10.1038/nature09584 · DOI · Paper page
  88. 10.1002/glia.22566 · DOI
  89. 10.1042/CS20150554 · DOI
  90. 10.1126/science.1174447 · DOI · Paper page
  91. 10.1093/hmg/ddr306 · DOI · Paper page
  92. 10.1006/geno.1998.5588 · DOI
  93. 10.1242/jcs.146365 · DOI
  94. 10.1038/emboj.2012.32 · DOI · Paper page
  95. 10.1126/scisignal.2002790 · DOI
  96. 10.1038/ncb3114 · DOI
  97. 10.1016/j.molcel.2013.01.024 · DOI · Paper page
  98. 10.1038/nature13961 · DOI
  99. 10.1038/nature13949 · DOI
  100. 10.1016/j.gde.2014.04.003 · DOI
  101. 10.1016/0014-5793(93)80398-E · DOI
  102. 10.1016/j.cub.2018.01.004 · DOI · Paper page
  103. 10.1038/ncb1723 · DOI · Paper page
  104. 10.1074/jbc.M115.689646 · DOI
  105. 10.1038/ncomms12420 · DOI · Paper page
  106. 10.1038/ncb2757 · DOI · Paper page
  107. 10.1083/jcb.200907014 · DOI
  108. 10.1177/38.4.2319125 · DOI
  109. 10.1016/j.cell.2010.04.009 · DOI
  110. 10.1016/j.devcel.2011.02.006 · DOI
  111. 10.1002/bies.201200130 · DOI
  112. 10.1016/j.cell.2012.11.001 · DOI
  113. 10.1038/nature14147 · DOI
  114. 10.1242/jcs.01370 · DOI
  115. 10.1091/mbc.e13-08-0447 · DOI · Paper page
  116. 10.1016/j.cub.2010.08.002 · DOI
  117. 10.1016/j.molcel.2014.11.006 · DOI · Paper page
  118. 10.1111/tra.12484 · DOI
  119. 10.1038/ncb2557 · DOI · Paper page
  120. 10.1016/j.devcel.2016.04.014 · DOI
  121. 10.1038/emboj.2012.341 · DOI · Paper page
  122. 10.1016/j.biocel.2015.11.009 · DOI
  123. 10.1126/science.2799391 · DOI
  124. 10.1016/0968-0004(90)90019-8 · DOI
  125. 10.1016/j.molcel.2011.04.025 · DOI
  126. 10.1038/cr.2013.153 · DOI
  127. 10.1126/science.273.5274.501 · DOI · Paper page
  128. 10.1128/MCB.02070-07 · DOI
  129. 10.1083/jcb.137.4.825 · DOI
  130. 10.1016/j.molcel.2015.05.030 · DOI
  131. 10.1007/s12192-016-0672-x · DOI
  132. 10.1093/gerona/glw090 · DOI
  133. 10.1093/gerona/glw064 · DOI
  134. 10.7554/eLife.16351 · DOI · Paper page
  135. 10.1126/scisignal.2000559 · DOI · Paper page
  136. 10.1111/acel.12203 · DOI
  137. 10.4161/cc.10.24.18486 · DOI
  138. 10.1111/acel.12425 · DOI · Paper page
  139. 10.1016/j.celrep.2016.07.029 · DOI · Paper page
  140. 10.1172/JCI77361 · DOI · Paper page
  141. 10.1038/nm.1851 · DOI · Paper page
  142. 10.1007/978-1-4939-2404-2_3 · DOI
  143. 10.1046/j.1474-9728.2003.00045.x · DOI · Paper page
  144. 10.1096/fj.03-0860fje · DOI · Paper page
  145. 10.4161/auto.5618 · DOI
  146. 10.4161/auto.5269 · DOI · Paper page
  147. 10.1016/j.cmet.2009.11.010 · DOI · Paper page
  148. 10.3389/fnins.2018.00255 · DOI
  149. 10.1093/brain/awv385 · DOI
  150. 10.1080/15548627.2016.1164369 · DOI
  151. 10.1093/brain/awq341 · DOI · Paper page
  152. 10.1016/j.molcel.2015.05.031 · DOI · Paper page
  153. 10.1038/nrclinonc.2018.28 · DOI · Paper page
  154. 10.1056/NEJMoa1403352 · DOI

Cited by

Sorted by citations

Metadata

Authors
Lamming, D. W., & Bar‐Peled, L.
Affiliations
  • William S. Middleton Memorial Veterans Hospital Madison Wisconsin
  • Department of Molecular Medicine The Scripps Research Institute La Jolla California
Venue
Traffic
Publisher
Wiley
Published
2018-11-14
Volume
20
Issue
1
Pages
27-38
ISSN
  • 1398-9219
  • 1600-0854
Cited by
173
References
43
Language
en
Funders
  • Diabetes Research Center, University of Washington (2 P30 DK020579)
  • National Institutes of Health (AG050135, AG051974, AG056771, CA215249)
  • U.S. Department of Veterans Affairs (I01‐BX004031)
  • Damon Runyon Cancer Research Foundation (DRG‐2178‐14)
  • American Federation for Aging Research

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review