Molecular Evolutionary Genetics

The sequence of the human genome

Venter, J. C., Adams, M. D., Myers, E. W., Li, P. W., Mural, R. J., Sutton, G. G., Smith, H. O., Yandell, M., Evans, C. A., Holt, R. A., et al. (2001) · Science · doi:10.1126/science.1058040 · Cited by 13,909

Ancient Admixture in Human History

Patterson, N., Moorjani, P., Luo, Y., Mallick, S., Rohland, N., Zhan, Y., Genschoreck, T., Webster, T., & Reich, D. (2012) · Genetics · doi:10.1534/genetics.112.145037 · Cited by 2,848

Bayesian inference of species trees from multilocus data

Heled, J., & Drummond, A. J. (2010) · Molecular Biology and Evolution · doi:10.1093/molbev/msp274 · Cited by 2,453

Detecting recent positive selection in the human genome from haplotype structure

Sabeti, P. C., Reich, D. E., Higgins, J. M., Levine, H. Z. P., Richter, D. J., Schaffner, S. F., Gabriel, S. B., Platko, J. V., Patterson, N. J., McDonald, G. J., et al. (2002) · Nature · doi:10.1038/nature01140 · Cited by 2,106

A molecular timescale for vertebrate evolution

Kumar, S., & Hedges, S. B. (1998) · Nature · doi:10.1038/31927 · Cited by 1,936

Hitchhiking Under Positive Darwinian Selection

Fay, J. C., & Wu, C.-I. (2000) · Genetics · doi:10.1093/genetics/155.3.1405 · Cited by 1,819

Statistics and Partitioning of Species Diversity, and Similarity among Multiple Communities

Lande, R. (1996) · Oikos · doi:10.2307/3545743 · Cited by 1,409

Modelling and analysis of gene regulatory networks

Karlebach, G., & Shamir, R. (2008) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm2503 · Cited by 1,296

Positive Natural Selection in the Human Lineage

Sabeti, P. C., Schaffner, S. F., Fry, B., Lohmueller, J., Varilly, P., Shamovsky, O., Palma, A., Mikkelsen, T. S., Altshuler, D., & Lander, E. S. (2006) · Science · doi:10.1126/science.1124309 · Cited by 1,157

A nonparametric approach to estimating divergence times in the absence of rate constancy.

Sanderson, M. J. (1997) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a025731 · Cited by 1,156

Divergence of duplicate genes in exon-intron structure

Xu, G., Guo, C., Shan, H., & Kong, H. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1109047109 · Cited by 1,072

Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow

Cruickshank, T. E., & Hahn, M. W. (2014) · Molecular Ecology · doi:10.1111/mec.12796 · Cited by 1,061

Phylogeny Estimation and Hypothesis Testing Using Maximum Likelihood

Huelsenbeck, J. P., & Crandall, K. A. (1997) · Annual Review of Ecology and Systematics · doi:10.1146/annurev.ecolsys.28.1.437 · Cited by 1,018

On the origins of cells: A hypothesis for the evolutionary transitions from abiotic geochemistry to chemoautotrophic prokaryotes, and from prokaryotes to nucleated cells

Martin, W., & Russell, M. J. (2003) · Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences · doi:10.1098/rstb.2002.1183 · Cited by 856

Variation in gene expression within and among natural populations

Oleksiak, M. F., Churchill, G. A., & Crawford, D. L. (2002) · Nature Genetics · doi:10.1038/ng983 · Cited by 736

A high-resolution HLA and SNP haplotype map for disease association studies in the extended human MHC

de Bakker, P. I. W., McVean, G., Sabeti, P. C., Miretti, M. M., Green, T., Marchini, J., Ke, X., Monsuur, A. J., Whittaker, P., Delgado, M., et al. (2006) · Nature Genetics · doi:10.1038/ng1885 · Cited by 766

Toward a phylogenetic classification of Primates based on DNA evidence complemented by fossil evidence.

Goodman, M., Porter, C. A., Czelusniak, J., Page, S. L., Schneider, H., Shoshani, J., Gunnell, G., & Groves, C. P. (1998) · Molecular Phylogenetics and Evolution · doi:10.1006/mpev.1998.0495 · Cited by 743

Reading the entrails of chickens: molecular timescales of evolution and the illusion of precision

Graur, D., & Martin, W. (2004) · Trends in Genetics · doi:10.1016/j.tig.2003.12.003 · Cited by 669

Natural variation in genome architecture among 205 Drosophila melanogaster Genetic Reference Panel lines

Huang, W., Massouras, A., Inoue, Y., Peiffer, J., Ràmia, M., Tarone, A. M., Turlapati, L., Zichner, T., Zhu, D., Lyman, R. F., et al. (2014) · Genome Research · doi:10.1101/gr.171546.113 · Cited by 661

Determining Divergence Times of the Major Kingdoms of Living Organisms with a Protein Clock

Doolittle, R. F., Feng, D.-F., Tsang, S., Cho, G., & Little, E. (1996) · Science · doi:10.1126/science.271.5248.470 · Cited by 581

RECOMBINATION AND THE MULTILOCUS STRUCTURE OF FUNGAL POPULATIONS

Milgroom, M. G. (1996) · Annual Review of Phytopathology · doi:10.1146/annurev.phyto.34.1.457 · Cited by 549

Evolution on a volcanic conveyor belt: using phylogeographic reconstructions and K–Ar‐based ages of the Hawaiian Islands to estimate molecular evolutionary rates

FLEISCHER, R. C., MCINTOSH, C. E., & TARR, C. L. (1998) · Molecular Ecology · doi:10.1046/j.1365-294x.1998.00364.x · Cited by 481

Hunter-gatherer genomic diversity suggests a southern African origin for modern humans

Henn, B. M., Gignoux, C. R., Jobin, M., Granka, J. M., Macpherson, J. M., Kidd, J. M., Rodríguez-Botigué, L., Ramachandran, S., Hon, L., Brisbin, A., et al. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1017511108 · Cited by 502

Statistical analysis strategies for association studies involving rare variants

Bansal, V., Libiger, O., Torkamani, A., & Schork, N. J. (2010) · Nature Reviews Genetics · doi:10.1038/nrg2867 · Cited by 455

Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication

Carneiro, M., Rubin, C.-J., Di Palma, F., Albert, F. W., Alföldi, J., Barrio, A. M., Pielberg, G., Rafati, N., Sayyab, S., Turner-Maier, J., et al. (2014) · Science · doi:10.1126/science.1253714 · Cited by 404

The genetic structure of Pacific Islanders

Friedlaender, J. S., Friedlaender, F. R., Reed, F. A., Kidd, K. K., Kidd, J. R., Chambers, G. K., Lea, R. A., Loo, J.-H., Koki, G., Hodgson, J. A., et al. (2008) · PLoS Genetics · doi:10.1371/journal.pgen.0040019 · Cited by 359

PHYLOGENETIC ANALYSIS IN MOLECULAR EVOLUTIONARY GENETICS

Nei, M. (1996) · Annual Review of Genetics · doi:10.1146/annurev.genet.30.1.371 · Cited by 349

Estimation of divergence times from multiprotein sequences for a few mammalian species and several distantly related organisms

Nei, M., Xu, P., & Glazko, G. (2001) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.051611498 · Cited by 329

Yeasts in Food and Beverages

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On the origin and evolution of SARS-CoV-2

Singh, D., & Yi, S. V. (2021) · Experimental & Molecular Medicine · doi:10.1038/s12276-021-00604-z · Cited by 281

Human mtDNA and Y-chromosome variation is correlated with matrilocal versus patrilocal residence.

Oota, H., Settheetham-Ishida, W., Tiwawech, D., Ishida, T., & Stoneking, M. (2001) · Nature Genetics · doi:10.1038/ng711 · Cited by 268

A new sampling formula for neutral biodiversity

Etienne, R. S. (2005) · Ecology Letters · doi:10.1111/j.1461-0248.2004.00717.x · Cited by 263

Zebu Cattle Are an Exclusive Legacy of the South Asia Neolithic

Chen, S., Lin, B.-Z., Baig, M., Mitra, B., Lopes, R. J., Santos, A. M., Magee, D. A., Azevedo, M., Tarroso, P., Sasazaki, S., et al. (2010) · Molecular Biology and Evolution · doi:10.1093/molbev/msp213 · Cited by 248

Identification of a Family of Sorting Nexin Molecules and Characterization of Their Association with Receptors

Haft, C. R., de la Luz Sierra, M., Barr, V. A., Haft, D. H., & Taylor, S. I. (1998) · Molecular and Cellular Biology · doi:10.1128/mcb.18.12.7278 · Cited by 244

Trading genes along the silk road: mtDNA sequences and the origin of central Asian populations.

Comas, D., Calafell, F., Mateu, E., Pérez-Lezaun, A., Bosch, E., Martínez-Arias, R., Clarimon, J., Facchini, F., Fiori, G., Luiselli, D., et al. (1998) · The American Journal of Human Genetics · doi:10.1086/302133 · Cited by 239

Untitled work

(1995) · Europe PMC (PubMed Central) · Cited by 226

Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts

D’Souza, C. A., Kronstad, J. W., Taylor, G., Warren, R., Yuen, M., Hu, G., Jung, W. H., Sham, A., Kidd, S. E., Tangen, K., et al. (2011) · mBio · doi:10.1128/mbio.00342-10 · Cited by 202

Using BLAST for identifying gene and protein names in journal articles

Krauthammer, M., Rzhetsky, A., Morozov, P., & Friedman, C. (2000) · Gene · doi:10.1016/s0378-1119(00)00431-5 · Cited by 212

Genealogical Inference From Microsatellite Data

Wilson, I. J., & Balding, D. J. (1998) · Genetics · doi:10.1093/genetics/150.1.499 · Cited by 209

Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny

Cappellini, E., Welker, F., Pandolfi, L., Ramos-Madrigal, J., Samodova, D., Rüther, P. L., Fotakis, A. K., Lyon, D., Moreno-Mayar, J. V., Bukhsianidze, M., et al. (2019) · Nature · doi:10.1038/s41586-019-1555-y · Cited by 205

Constructing primate phylogenies from ancient retrovirus sequences

Johnson, W. E., & Coffin, J. M. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.18.10254 · Cited by 199

Population structure of Anopheles gambiae in Africa

Lehmann, T. (2003) · Journal of Heredity · doi:10.1093/jhered/esg024 · Cited by 191

Genetic evidence of paleolithic colonization and neolithic expansion of modern humans on the Tibetan Plateau

Qi, X., Cui, C., Peng, Y., Zhang, X., Yang, Z., Zhong, H., Zhang, H., Xiang, K., Cao, X., Wang, Y., et al. (2013) · Molecular Biology and Evolution · doi:10.1093/molbev/mst093 · Cited by 196

Protein-length distributions for the three domains of life

Zhang, J. (2000) · Trends in Genetics · doi:10.1016/s0168-9525(99)01922-8 · Cited by 185

The city-fox phenomenon: genetic consequences of a recent colonization of urban habitat

Wandeler, P., Funk, S. M., Largiadèr, C. R., Gloor, S., & Breitenmoser, U. (2003) · Molecular Ecology · doi:10.1046/j.1365-294x.2003.01768.x · Cited by 189

Hierarchical patterns of global human Y-chromosome diversity.

Hammer, M. F., Karafet, T. M., Redd, A. J., Jarjanazi, H., Santachiara-Benerecetti, S., Soodyall, H., & Zegura, S. L. (2001) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a003906 · Cited by 192

Complex Patterns of Admixture across the Indonesian Archipelago

Hudjashov, G., Karafet, T. M., Lawson, D. J., Downey, S., Savina, O., Sudoyo, H., Lansing, J. S., Hammer, M. F., & Cox, M. P. (2017) · Molecular Biology and Evolution · doi:10.1093/molbev/msx196 · Cited by 191

Phylogeography of the reef fish Cephalopholis argus (Epinephelidae) indicates Pleistocene isolation across the indo-pacific barrier with contemporary overlap in the coral triangle

Gaither, M. R., Bowen, B. W., Bordenave, T.-R., Rocha, L. A., Newman, S. J., Gomez, J. A., van Herwerden, L., & Craig, M. T. (2011) · BMC Evolutionary Biology · doi:10.1186/1471-2148-11-189 · Cited by 191

The Western and Eastern Roots of the Saami—the Story of Genetic “Outliers” Told by Mitochondrial DNA and Y Chromosomes

Tambets, K., Rootsi, S., Kivisild, T., Help, H., Serk, P., Loogväli, E.-L., Tolk, H.-V., Reidla, M., Metspalu, E., Pliss, L., et al. (2004) · The American Journal of Human Genetics · doi:10.1086/383203 · Cited by 176

Sequence characterization of microsatellites in diploid and polyploid Ipomoea

Buteler, M. I., Jarret, R. L., & LaBonte, D. R. (1999) · Theoretical and Applied Genetics · doi:10.1007/s001220051216 · Cited by 175

An Extensive Analysis of Y-Chromosomal Microsatellite Haplotypes in Globally Dispersed Human Populations

Kayser, M., Krawczak, M., Excoffier, L., Dieltjes, P., Corach, D., Pascali, V., Gehrig, C., Bernini, L. F., Jespersen, J., Bakker, E., et al. (2001) · The American Journal of Human Genetics · doi:10.1086/319510 · Cited by 158

Phylogenetic Reconstruction of Orthology, Paralogy, and Conserved Synteny for Dog and Human

Goodstadt, L., & Ponting, C. P. (2006) · PLoS Computational Biology · doi:10.1371/journal.pcbi.0020133 · Cited by 154

The phylogenetic and geographic structure of Y-chromosome haplogroup R1a

Underhill, P. A., Poznik, G. D., Rootsi, S., Järve, M., Lin, A. A., Wang, J., Passarelli, B., Kanbar, J., Myres, N. M., King, R. J., et al. (2015) · European Journal of Human Genetics · doi:10.1038/ejhg.2014.50 · Cited by 151

Inferring Orthology and Paralogy

Altenhoff, A. M., Glover, N. M., & Dessimoz, C. (2019) · Methods in Molecular Biology · doi:10.1007/978-1-4939-9074-0_5 · Cited by 148

Genetic Diversity and Origin of Chinese Cattle Revealed by mtDNA D-Loop Sequence Variation

Lai, S.-J., Liu, Y.-P., Liu, Y.-X., Li, X.-W., & Yao, Y.-G. (2006) · Molecular Phylogenetics and Evolution · doi:10.1016/j.ympev.2005.06.013 · Cited by 143

Human Y Chromosome Haplogroup N: A Non-trivial Time-Resolved Phylogeography that Cuts across Language Families

Ilumäe, A.-M., Reidla, M., Chukhryaeva, M., Järve, M., Post, H., Karmin, M., Saag, L., Agdzhoyan, A., Kushniarevich, A., Litvinov, S., et al. (2016) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2016.05.025 · Cited by 134

Mitochondrial cytochrome b analysis reveals two invasive lionfish species with strong founder effects in the western Atlantic

Hamner, R. M., Freshwater, D. W., & Whitfield, P. E. (2007) · Journal of Fish Biology · doi:10.1111/j.1095-8649.2007.01575.x · Cited by 132

Paths and timings of the peopling of Polynesia inferred from genomic networks

Ioannidis, A. G., Blanco-Portillo, J., Sandoval, K., Hagelberg, E., Barberena-Jonas, C., Hill, A. V. S., Rodríguez-Rodríguez, J. E., Fox, K., Robson, K., Haoa-Cardinali, S., et al. (2021) · Nature · doi:10.1038/s41586-021-03902-8 · Cited by 124

Identification and characterisation of novel human Y-chromosomal microsatellites from sequence database information

Ayub, Q. (2000) · Nucleic Acids Research · doi:10.1093/nar/28.2.e8 · Cited by 130

Major East-West Division Underlies Y Chromosome Stratification across Indonesia

Karafet, T. M., Hallmark, B., Cox, M. P., Sudoyo, H., Downey, S., Lansing, J. S., & Hammer, M. F. (2010) · Molecular Biology and Evolution · doi:10.1093/molbev/msq063 · Cited by 130

Horizontal Gene Transfer Can Rescue Prokaryotes from Muller’s Ratchet: Benefit of DNA from Dead Cells and Population Subdivision

Takeuchi, N., Kaneko, K., & Koonin, E. V. (2014) · G3 Genes|Genomes|Genetics · doi:10.1534/g3.113.009845 · Cited by 125

High levels of Y-chromosome differentiation among native Siberian populations and the genetic signature of a boreal hunter-gatherer way of life.

Karafet, T. M., Osipova, L. P., Gubina, M. A., Posukh, O. L., Zegura, S. L., & Hammer, M. F. (2002) · Human Biology · doi:10.1353/hub.2003.0006 · Cited by 124

Microsatellite Diversity Suggests Different Histories for Mediterranean and Northern European Cattle Populations

Cymbron, T., Freeman, A. R., Isabel Malheiro, M., Vigne, J.-D., & Bradley, D. G. (2005) · Proceedings of the Royal Society B: Biological Sciences · doi:10.1098/rspb.2005.3138 · Cited by 117

Population bottlenecks in Polynesia revealed by minisatellites

Flint, J., Boyce, A. J., Martinson, J. J., & Clegg, J. B. (1989) · Human Genetics · doi:10.1007/bf00285167 · Cited by 111

The origin and evolution of Ebola and Marburg viruses

Suzuki, Y., & Gojobori, T. (1997) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a025820 · Cited by 108

Yam genomics supports West Africa as a major cradle of crop domestication

Scarcelli, N., Cubry, P., Akakpo, R., Thuillet, A.-C., Obidiegwu, J., Baco, M. N., Otoo, E., Sonké, B., Dansi, A., Djedatin, G., et al. (2019) · Science Advances · doi:10.1126/sciadv.aaw1947 · Cited by 105

Indo‐European origins: A computer‐simulation test of five hypotheses

Barbujani, G., Sokal, R. R., & Oden, N. L. (1995) · American Journal of Physical Anthropology · doi:10.1002/ajpa.1330960202 · Cited by 104

Centromere-proximal differentiation and speciation in Anopheles gambiae

Stump, A. D., Fitzpatrick, M. C., Lobo, N. F., Traoré, S., Sagnon, N., Costantini, C., Collins, F. H., & Besansky, N. J. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0508161102 · Cited by 103

Feeding patterns of molestus and pipiens forms of Culex pipiens (Diptera: Culicidae) in a region of high hybridization

Gomes, B., Sousa, C. A., Vicente, J. L., Pinho, L., Calderón, I., Arez, E., Almeida, A. P., Donnelly, M. J., & Pinto, J. (2013) · Parasites & Vectors · doi:10.1186/1756-3305-6-93 · Cited by 103

A population-genetic perspective on the similarities and differences among worldwide human populations

Rosenberg, N. A. (2011) · Human Biology · doi:10.3378/027.083.0601 · Cited by 100

Epitope mapping and topographic analysis of VAR2CSA DBL3X involved in P. falciparum placental sequestration

Dahlbäck, M., Rask, T. S., Andersen, P. H., Nielsen, M. A., Ndam, N. T., Resende, M., Turner, L., Deloron, P., Hviid, L., Lund, O., et al. (2006) · PLoS Pathogens · doi:10.1371/journal.ppat.0020124 · Cited by 98

Genetic variation across the historical range of the wild turkey (Meleagris gallopavo)

Mock, K. E., Theimer, T. C., Rhodes, O. E., Greenberg, D. L., & Keim, P. (2002) · Molecular Ecology · doi:10.1046/j.1365-294x.2002.01467.x · Cited by 96

Improved dating of the human/chimpanzee separation in the mitochondrial DNA tree: Heterogeneity among amino acid sites

Adachi, J., & Hasegawa, M. (1995) · Journal of Molecular Evolution · doi:10.1007/bf00160510 · Cited by 94

Tracing the evolutionary history of Drosophila regulatory regions with models that identify transcription factor binding sites

Dermitzakis, E. T. (2003) · Molecular Biology and Evolution · doi:10.1093/molbev/msg077 · Cited by 88

Peopling of Sahul: mtDNA Variation in Aboriginal Australian and Papua New Guinean Populations

Redd, A. J., & Stoneking, M. (1999) · The American Journal of Human Genetics · doi:10.1086/302533 · Cited by 91

Structure, allelic diversity and selection of Asr genes, candidate for drought tolerance, in Oryza sativa L. and wild relatives

Philippe, R., Courtois, B., McNally, K. L., Mournet, P., El-Malki, R., Le Paslier, M. C., Fabre, D., Billot, C., Brunel, D., Glaszmann, J.-C., et al. (2010) · Theoretical and Applied Genetics · doi:10.1007/s00122-010-1348-z · Cited by 85

Making (anti)sense of non-coding sequence conservation

Lipman, D. J. (1997) · Nucleic Acids Research · doi:10.1093/nar/25.18.3580 · Cited by 85

Patterns of ribosomal RNA evolution in salamanders.

(1989) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a040539 · Cited by 84

Variability of canine microsatellites within and between different dog breeds

Zajc, I., Mellersh, C. S., & Sampson, J. (1997) · Mammalian Genome · doi:10.1007/s003359900386 · Cited by 81

An Estimate of Divergence Time of Parazoa and Eumetazoa and That of Cephalochordata and Vertebrata by Aldolase and Triose Phosphate Isomerase Clocks

Nikoh, N., Iwabe, N., Kuma, K.-I., Ohno, M., Sugiyama, T., Watanabe, Y., Yasui, K., Shi-cui, Z., Hori, K., Shimura, Y., et al. (1997) · Journal of Molecular Evolution · doi:10.1007/pl00006208 · Cited by 79

A recent shift from polygyny to monogamy in humans is suggested by the analysis of worldwide Y-chromosome diversity.

Dupanloup, I., Pereira, L., Bertorelle, G., Calafell, F., Prata, M. J., Amorim, A., & Barbujani, G. (2003) · Journal of Molecular Evolution · doi:10.1007/s00239-003-2458-x · Cited by 79

Distinguishing the co-ancestries of haplogroup G Y-chromosomes in the populations of Europe and the Caucasus

Rootsi, S., Myres, N. M., Lin, A. A., Järve, M., King, R. J., Kutuev, I., Cabrera, V. M., Khusnutdinova, E. K., Varendi, K., Sahakyan, H., et al. (2012) · European Journal of Human Genetics · doi:10.1038/ejhg.2012.86 · Cited by 79

Elucidating the spread of the emerging canid nematode Angiostrongylus vasorum between Palaearctic and Nearctic ecozones

Jefferies, R., Shaw, S. E., Willesen, J., Viney, M. E., & Morgan, E. R. (2010) · Infection, Genetics and Evolution · doi:10.1016/j.meegid.2010.01.013 · Cited by 78

Heterogeneity of tempo and mode of mitochondrial DNA evolution among mammalian orders.

HASEGAWA, M., & KISHINO, H. (1989) · The Japanese Journal of Genetics · doi:10.1266/jjg.64.243 · Cited by 71

On the origin of a domesticated species: identifying the parent population of Russian silver foxes (Vulpes vulpes): THE ORIGIN OF RUSSIAN SILVER FOXES

STATHAM, M. J., TRUT, L. N., SACKS, B. N., KHARLAMOVA, A. V., OSKINA, I. N., GULEVICH, R. G., JOHNSON, J. L., TEMNYKH, S. V., ACLAND, G. M., & KUKEKOVA, A. V. (2011) · Biological Journal of the Linnean Society · doi:10.1111/j.1095-8312.2011.01629.x · Cited by 72

Background selection and F ST : Consequences for detecting local adaptation

Matthey‐Doret, R., & Whitlock, M. C. (2019) · Molecular Ecology · doi:10.1111/mec.15197 · Cited by 73

Low levels of nucleotide diversity in Crocodylus moreletii and evidence of hybridization with C. acutus

Ray, D. A., Dever, J. A., Platt, S. G., Rainwater, T. R., Finger, A. G., McMurry, S. T., Batzer, M. A., Barr, B., Stafford, P. J., McKnight, J., et al. (2004) · Conservation Genetics · doi:10.1023/b:coge.0000041024.96928.fe · Cited by 68

Frequentist estimation of coalescence times from nucleotide sequence data using a tree-based partition.

Tang, H., Siegmund, D. O., Shen, P., Oefner, P. J., & Feldman, M. W. (2002) · Genetics · doi:10.1093/genetics/161.1.447 · Cited by 65

North American montane red foxes: expansion, fragmentation, and the origin of the Sacramento Valley red fox

Sacks, B. N., Statham, M. J., Perrine, J. D., Wisely, S. M., & Aubry, K. B. (2010) · Conservation Genetics · doi:10.1007/s10592-010-0053-4 · Cited by 64

Genetic structuring and migration patterns of Atlantic bigeye tuna, Thunnus obesus (Lowe, 1839)

Gonzalez, E. G., Beerli, P., & Zardoya, R. (2008) · BMC Evolutionary Biology · doi:10.1186/1471-2148-8-252 · Cited by 63

Genomic differentiation and demographic histories of Atlantic and Indo-Pacific yellowfin tuna (Thunnus albacares) populations

Barth, J. M. I., Damerau, M., Matschiner, M., Jentoft, S., & Hanel, R. (2017) · Genome Biology and Evolution · doi:10.1093/gbe/evx067 · Cited by 62

Y‐specific microsatellites reveal an African subfamily in taurine (Bos taurus) cattle

Pérez‐Pardal, L., Royo, L. J., Beja‐Pereira, A., Curik, I., Traoré, A., Fernández, I., Sölkner, J., Alonso, J., Álvarez, I., Bozzi, R., et al. (2010) · Animal Genetics · doi:10.1111/j.1365-2052.2009.01988.x · Cited by 61

Local Extinction and Recolonization, Species Effective Population Size, and Modern Human Origins

Eller, E., Hawks, J., & Relethford, J. H. (2009) · Human Biology · doi:10.3378/027.081.0623 · Cited by 54

Mitochondrial DNA analysis reveals three stocks of yellowfin tuna Thunnus albacares (Bonnaterre, 1788) in Indian waters

Kunal, S. P., Kumar, G., Menezes, M. R., & Meena, R. M. (2013) · Conservation Genetics · doi:10.1007/s10592-013-0445-3 · Cited by 55

Population structure, dispersal and colonization history of the garden bumblebee Bombus hortorum in the Western Isles of Scotland

Goulson, D., Kaden, J. C., Lepais, O., Lye, G. C., & Darvill, B. (2011) · Conservation Genetics · doi:10.1007/s10592-011-0190-4 · Cited by 53

Apparent intrachromosomal exchange on the human Y chromosome explained by population history

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