Cited by 1,613Dementia and Cognitive Impairment ResearchAlzheimer's disease research and treatmentsFunctional Brain Connectivity Studies

Distinct patterns of brain activity in young carriers of the APOE -ε4 allele

Open access
Filippini, Nicola, MacIntosh, Bradley J., Hough, Morgan G., Goodwin, Guy M., Frisoni, Giovanni B., Smith, Stephen M., Matthews, Paul M., Beckmann, Christian F. +1 more·2009·Proceedings of the National Academy of Sciences

Abstract

The APOE ε4 allele is a risk factor for late-life pathological changes that is also associated with anatomical and functional brain changes in middle-aged and elderly healthy subjects. We investigated structural and functional effects of the APOE polymorphism in 18 young healthy APOE ε4-carriers and 18 matched noncarriers (age range: 20–35 years). Brain activity was studied both at rest and during an encoding memory paradigm using blood oxygen level-dependent fMRI. Resting fMRI revealed increased “default mode network” (involving retrosplenial, medial temporal, and medial-prefrontal cortical areas) coactivation in ε4-carriers relative to noncarriers. The encoding task produced greater hippocampal activation in ε4-carriers relative to noncarriers. Neither result could be explained by differences in memory performance, brain morphology, or resting cerebral blood flow. The APOE ε4 allele modulates brain function decades before any clinical or neurophysiological expression of neurodegenerative processes.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1073/pnas.0811879106

Cites

11 of 11 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • Previous studies have already linked APOE4 to increased (hyper-)metabolism in young individuals.

    “However, previous studies have already linked APOE4 to increased (hyper-)metabolism in young individuals.”

    From APOE4 Increases Energy Metabolism in APOE-Isogenic iPSC-Derived Neurons (2024) · cites this paper as [45]

    The Abstract reports reduced resting glucose metabolism in young and middle-aged APOE ε4 carriers, contrary to the claim of increased metabolism. The paper does find increased BOLD activation in young carriers, but it distinguishes brain activation from glucose metabolism. (LLM, conf=0.88)

    Checked by a reasoning model — may be wrong.

    Experimental — accuracy not yet measured
  • Studies in young adults, before the onset of a pathology, showed that APOE4 carriers display hypermetabolism and hyperactivity in distinct brain regions, such as the hippocampus, entorhinal cortex, and cortical regions.

    “Studies in young adults, before the onset of a pathology, showed that APOE4 carriers display hypermetabolism and hyperactivity in distinct brain regions, such as the hippocampus, entorhinal cortex, and cortical regions [44,45,46].”

    From APOE4 Increases Energy Metabolism in APOE-Isogenic iPSC-Derived Neurons (2024) · cites this paper as [45]

    The Abstract and Discussion report increased resting coactivation and greater hippocampal activation during memory encoding in healthy young APOE ε4 carriers, including activity in a network with cortical regions. They do not establish increased entorhinal activation or hypermetabolism: the Abstract instead describes prior reports of reduced resting glucose metabolism, and the Discussion reports no difference in resting brain perfusion between the study groups. Page numbers are unavailable in our copy. (LLM, conf=0.90)

    Experimental — accuracy not yet measured
  • Young ApoE4 carriers showed increased brain activity in default network regions, as well as in the hippocampus and the temporal lobe, possibly due to increased aerobic glycolysis.

    “Young ApoE4 carriers showed increased brain activity in default network regions, as well as in the hippocampus and the temporal lobe, possibly due to increased aerobic glycolysis.34”

    From ApoE4-dependent lysosomal cholesterol accumulation impairs mitochondrial homeostasis and oxidative phosphorylation in human astrocytes (2023) · cites this paper as [35]

    The Results report greater default-mode-network coactivation in medial temporal, medial-prefrontal, and retrosplenial regions, as well as greater hippocampal activation during memory encoding in young APOE ε4 carriers. They do not establish a separate increase across the temporal lobe or suggest increased aerobic glycolysis as an explanation; the Discussion considers other possible mechanisms. (LLM, conf=0.88)

    Experimental — accuracy not yet measured
  • Young APOE4 carriers or APOE4-knock-in mice with no apparent neurodegenerative pathology show increased brain metabolism and activity.

    “Interestingly, several studies in young APOE4 carriers or in APOE4-knock-in mice with no apparent neurodegenerative pathology, revealed increased brain metabolism and activity (Filippini et al., 2009; Evans et al., 2017; Nuriel et al., 2017; Venzi et al., 2017), indicating that the APOE4 effect on brain energy metabolism may differ depending on the degree of pathology.”

    From APOE genotype-dependent differences in human astrocytic energy metabolism (2025) · cites this paper as Filippini et al., 2009

  • Dual regression is a reliable technique which allows for the identification of group differences in the spatial and temporal features of ICNs common to the entire sample.

    “Dual regression is a reliable technique which allows for the identification of group differences in the spatial and temporal features of ICNs common to the entire sample (Filippini et al., 2009; Zuo et al., 2010).”

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Research works printed but not linked: 47

  1. [1]Mahley RW, Rall SC., Jr Apolipoprotein E: Far more than a lipid transport protein. Annu Rev Genomics Hum Genet. 2000;1:507–537. doi: 10.1146/annurev.genom.1.1.507. [DOI] [PubMed] [Google Scholar] · DOI · Paper page
  2. [2]Mahley RW. Apolipoprotein E: Cholesterol transport protein with expanding role in cell biology. Science. 1988;240:622–630. doi: 10.1126/science.3283935. [DOI] [PubMed] [Google Scholar] · DOI · Paper page
  3. [3]Lenzen HJ, Assmann G, Buchwalsky R, Schulte H. Association of apolipoprotein E polymorphism, low-density lipoprotein cholesterol, and coronary artery disease. Clin Chem. 1986;32:778–781. [PubMed] [Google Scholar]
  4. [4]Okuizumi K, et al. ApoE-epsilon 4 and early-onset Alzheimer's. Nat Genet. 1994;7:10–11. doi: 10.1038/ng0594-10b. [DOI] [PubMed] [Google Scholar] · DOI
  5. [5]Strittmatter WJ, et al. Binding of human apolipoprotein E to synthetic amyloid beta peptide: Isoform-specific effects and implications for late-onset Alzheimer disease. Proc Natl Acad Sci USA. 1993;90:8098–8102. doi: 10.1073/pnas.90.17.8098. [DOI] [PMC free article] [PubMed] [Google Scholar] · DOI · Paper page
  6. [6]Teasdale GM, Nicoll JA, Murray G, Fiddes M. Association of apolipoprotein E polymorphism with outcome after head injury. Lancet. 1997;350:1069–1071. doi: 10.1016/S0140-6736(97)04318-3. [DOI] [PubMed] [Google Scholar] · DOI
  7. [7]Deary IJ, et al. Cognitive change and the APOE epsilon 4 allele. Nature. 2002;418:932. doi: 10.1038/418932a. [DOI] [PubMed] [Google Scholar] · DOI
  8. [8]Wishart HA, et al. Regional brain atrophy in cognitively intact adults with a single APOE epsilon4 allele. Neurology. 2006;67:1221–1224. doi: 10.1212/01.wnl.0000238079.00472.3a. [DOI] [PubMed] [Google Scholar] · DOI
  9. [9]Reiman EM, et al. Preclinical evidence of Alzheimer's disease in persons homozygous for the epsilon 4 allele for apolipoprotein E. N Engl J Med. 1996;334:752–758. doi: 10.1056/NEJM199603213341202. [DOI] [PubMed] [Google Scholar] · DOI · Paper page
  10. [10]Small GW, et al. Cerebral metabolic and cognitive decline in persons at genetic risk for Alzheimer's disease. Proc Natl Acad Sci USA. 2000;97:6037–6042. doi: 10.1073/pnas.090106797. [DOI] [PMC free article] [PubMed] [Google Scholar] · DOI · Paper page
  11. [11]Reiman EM, et al. Functional brain abnormalities in young adults at genetic risk for late-onset Alzheimer's dementia. Proc Natl Acad Sci USA. 2004;101:284–289. doi: 10.1073/pnas.2635903100. [DOI] [PMC free article] [PubMed] [Google Scholar] · DOI · Paper page
  12. [12]Bookheimer SY, et al. Patterns of brain activation in people at risk for Alzheimer's disease. N Engl J Med. 2000;343:450–456. doi: 10.1056/NEJM200008173430701. [DOI] [PMC free article] [PubMed] [Google Scholar] · DOI · Paper page
  13. [13]Burggren AC, Small GW, Sabb FW, Bookheimer SY. Specificity of brain activation patterns in people at genetic risk for Alzheimer disease. Am J Geriatr Psychiatry. 2002;10:44–51. [PubMed] [Google Scholar]
  14. [15]Wishart HA, et al. Increased brain activation during working memory in cognitively intact adults with the APOE epsilon4 allele. Am J Psychiatry. 2006;163:1603–1610. doi: 10.1176/ajp.2006.163.9.1603. [DOI] [PubMed] [Google Scholar] · DOI
  15. [16]Fleisher AS, et al. Identification of Alzheimer disease risk by functional magnetic resonance imaging. Arch Neurol. 2005;62:1881–1888. doi: 10.1001/archneur.62.12.1881. [DOI] [PubMed] [Google Scholar] · DOI
  16. [17]Mondadori CR, et al. Better memory and neural efficiency in young apolipoprotein E epsilon4 carriers. Cereb Cortex. 2007;17:1934–1947. doi: 10.1093/cercor/bhl103. [DOI] [PubMed] [Google Scholar] · DOI
  17. [18]Filbey FM, Slack KJ, Sunderland TP, Cohen RM. Functional magnetic resonance imaging and magnetoencephalography differences associated with APOEepsilon4 in young healthy adults. NeuroReport. 2006;17:1585–1590. doi: 10.1097/01.wnr.0000234745.27571.d1. [DOI] [PubMed] [Google Scholar] · DOI
  18. [19]Shaw P, et al. Cortical morphology in children and adolescents with different apolipoprotein E gene polymorphisms: An observational study. Lancet Neurol. 2007;6:494–500. doi: 10.1016/S1474-4422(07)70106-0. [DOI] [PubMed] [Google Scholar] · DOI
  19. [21]Raichle ME, et al. A default mode of brain function. Proc Natl Acad Sci USA. 2001;98:676–682. doi: 10.1073/pnas.98.2.676. [DOI] [PMC free article] [PubMed] [Google Scholar] · DOI · Paper page
  20. [22]Boly M, et al. Intrinsic brain activity in altered states of consciousness: How conscious is the default mode of brain function? Ann NY Acad Sci. 2008;1129:119–129. doi: 10.1196/annals.1417.015. [DOI] [PMC free article] [PubMed] [Google Scholar] · DOI
  21. [24]Greicius MD, Srivastava G, Reiss AL, Menon V. Default-mode network activity distinguishes Alzheimer's disease from healthy aging: Evidence from functional MRI. Proc Natl Acad Sci USA. 2004;101:4637–4642. doi: 10.1073/pnas.0308627101. [DOI] [PMC free article] [PubMed] [Google Scholar] · DOI · Paper page
  22. [25]Sorg C, et al. Selective changes of resting-state networks in individuals at risk for Alzheimer's disease. Proc Natl Acad Sci USA. 2007;104:18760–18765. doi: 10.1073/pnas.0708803104. [DOI] [PMC free article] [PubMed] [Google Scholar] · DOI · Paper page
  23. [27]Andersen OM, Willnow TE. Lipoprotein receptors in Alzheimer's disease. Trends Neurosci. 2006;29:687–694. doi: 10.1016/j.tins.2006.09.002. [DOI] [PubMed] [Google Scholar] · DOI
  24. [29]Tulving E, Markowitsch HJ, Kapur S, Habib R, Houle S. Novelty encoding networks in the human brain: Positron emission tomography data. NeuroReport. 1994;5:2525–2528. doi: 10.1097/00001756-199412000-00030. [DOI] [PubMed] [Google Scholar] · DOI
  25. [30]Oakes TR, et al. Integrating VBM into the General Linear Model with voxelwise anatomical covariates. NeuroImage. 2007;34:500–508. doi: 10.1016/j.neuroimage.2006.10.007. [DOI] [PMC free article] [PubMed] [Google Scholar] · DOI
  26. [31]Beckmann CF, DeLuca M, Devlin JT, Smith SM. Investigations into resting-state connectivity using independent component analysis. Philos Trans R Soc London B. 2005;360:1001–1013. doi: 10.1098/rstb.2005.1634. [DOI] [PMC free article] [PubMed] [Google Scholar] · DOI · Paper page
  27. [32]Golby A, et al. Memory encoding in Alzheimer's disease: An fMRI study of explicit and implicit memory. Brain. 2005;128(Pt 4):773–787. doi: 10.1093/brain/awh400. [DOI] [PubMed] [Google Scholar] · DOI
  28. [33]Douaud G, et al. Anatomically related grey and white matter abnormalities in adolescent-onset schizophrenia. Brain. 2007;130(Pt 9):2375–2386. doi: 10.1093/brain/awm184. [DOI] [PubMed] [Google Scholar] · DOI
  29. [34]Gabrieli JD, Brewer JB, Desmond JE, Glover GH. Separate neural bases of two fundamental memory processes in the human medial temporal lobe. Science. 1997;276:264–266. doi: 10.1126/science.276.5310.264. [DOI] [PubMed] [Google Scholar] · DOI
  30. [35]Shohamy D, Wagner AD. Integrating memories in the human brain: Hippocampal-midbrain encoding of overlapping events. Neuron. 2008;60:378–389. doi: 10.1016/j.neuron.2008.09.023. [DOI] [PMC free article] [PubMed] [Google Scholar] · DOI
  31. [36]Andreasen NC, et al. Short-term and long-term verbal memory: A positron emission tomography study. Proc Natl Acad Sci USA. 1995;92:5111–5115. doi: 10.1073/pnas.92.11.5111. [DOI] [PMC free article] [PubMed] [Google Scholar] · DOI
  32. [37]Fliessbach K, Trautner P, Quesada CM, Elger CE, Weber B. Cerebellar contributions to episodic memory encoding as revealed by fMRI. NeuroImage. 2007;35:1330–1337. doi: 10.1016/j.neuroimage.2007.02.004. [DOI] [PubMed] [Google Scholar] · DOI
  33. [38]Buxton RB, Uludag K, Dubowitz DJ, Liu TT. Modeling the hemodynamic response to brain activation. NeuroImage. 2004;23(Suppl 1):S220–S233. doi: 10.1016/j.neuroimage.2004.07.013. [DOI] [PubMed] [Google Scholar] · DOI
  34. [39]Brown GG, et al. BOLD and perfusion response to finger-thumb apposition after acetazolamide administration: Differential relationship to global perfusion. J Cereb Blood Flow Metab. 2003;23:829–837. doi: 10.1097/01.WCB.0000071887.63724.B2. [DOI] [PubMed] [Google Scholar] · DOI
  35. [40]Fleisher AS, et al. Cerebral perfusion and oxygenation differences in Alzheimer's disease risk. Neurobiol Aging. 2008 doi: 10.1016/j.neurobiolaging.2008.01.012. in press. [DOI] [PMC free article] [PubMed] [Google Scholar] · DOI
  36. [41]Arendt T, et al. Plastic neuronal remodeling is impaired in patients with Alzheimer's disease carrying apolipoprotein epsilon 4 allele. J Neurosci. 1997;17:516–529. doi: 10.1523/JNEUROSCI.17-02-00516.1997. [DOI] [PMC free article] [PubMed] [Google Scholar] · DOI · Paper page
  37. [42]Masliah E, et al. Neurodegeneration in the central nervous system of apoE-deficient mice. Exp Neurol. 1995;136:107–122. doi: 10.1006/exnr.1995.1088. [DOI] [PubMed] [Google Scholar] · DOI
  38. [43]Buttini M, et al. Expression of human apolipoprotein E3 or E4 in the brains of Apoe−/− mice: Isoform-specific effects on neurodegeneration. J Neurosci. 1999;19:4867–4880. doi: 10.1523/JNEUROSCI.19-12-04867.1999. [DOI] [PMC free article] [PubMed] [Google Scholar] · DOI
  39. [45]Bellosta S, et al. Stable expression and secretion of apolipoproteins E3 and E4 in mouse neuroblastoma cells produces differential effects on neurite outgrowth. J Biol Chem. 1995;270:27063–27071. doi: 10.1074/jbc.270.45.27063. [DOI] [PubMed] [Google Scholar] · DOI · Paper page
  40. [47]Yun SH, et al. Blockade of nicotinic acetylcholine receptors suppresses hippocampal long-term potentiation in wild-type but not ApoE4 targeted replacement mice. J Neurosci Res. 2005;82:771–777. doi: 10.1002/jnr.20684. [DOI] [PubMed] [Google Scholar] · DOI
  41. [48]Bliss TV, Collingridge GL. A synaptic model of memory: Long-term potentiation in the hippocampus. Nature. 1993;361:31–39. doi: 10.1038/361031a0. [DOI] [PubMed] [Google Scholar] · DOI · Paper page
  42. [49]Williams JH, Errington ML, Lynch MA, Bliss TV. Arachidonic acid induces a long-term activity-dependent enhancement of synaptic transmission in the hippocampus. Nature. 1989;341:739–742. doi: 10.1038/341739a0. [DOI] [PubMed] [Google Scholar] · DOI
  43. [50]Sanchez-Mejia RO, et al. Phospholipase A2 reduction ameliorates cognitive deficits in a mouse model of Alzheimer's disease. Nat Neurosci. 2008;11:1311–1318. doi: 10.1038/nn.2213. [DOI] [PMC free article] [PubMed] [Google Scholar] · DOI
  44. [51]Menzel HJ, Kladetzky RG, Assmann G. Apolipoprotein E polymorphism and coronary artery disease. Arteriosclerosis. 1983;3:310–315. doi: 10.1161/01.atv.3.4.310. [DOI] [PubMed] [Google Scholar] · DOI
  45. [52]Benjamin R, et al. Apolipoprotein E genes in Lewy body and Parkinson's disease. Lancet. 1994;343:1565. doi: 10.1016/s0140-6736(94)92961-0. [DOI] [PubMed] [Google Scholar] · DOI
  46. [56]Woolrich MW, Behrens TE, Beckmann CF, Jenkinson M, Smith SM. Multilevel linear modelling for FMRI group analysis using Bayesian inference. NeuroImage. 2004;21:1732–1747. doi: 10.1016/j.neuroimage.2003.12.023. [DOI] [PubMed] [Google Scholar] · DOI
  47. [58]MacIntosh BJ, et al. Measuring the effects of remifentanil on cerebral blood flow and arterial arrival time using 3D GRASE MRI with pulsed arterial spin labelling. J Cereb Blood Flow Metab. 2008;28:1514–1522. doi: 10.1038/jcbfm.2008.46. [DOI] [PubMed] [Google Scholar] · DOI

Cited by

Sorted by citations

Authors
Filippini, N., MacIntosh, B. J., Hough, M. G., Goodwin, G. M., Frisoni, G. B., Smith, S. M., Matthews, P. M., Beckmann, C. F., & Mackay, C. E.
Affiliations
  • University of Oxford (GB)
  • University Department of Psychiatry and
  • Centro San Giovanni di Dio Fatebenefratelli (IT)
  • GlaxoSmithKline (United Kingdom) (GB)
Venue
Proceedings of the National Academy of Sciences
Published
2009-04-28
Volume
106
Issue
17
Pages
7209-7214
ISSN
  • 0027-8424 (ISSN-L)
  • 1091-6490
OpenAlex
W2041325253
Cited by
1,613
References
11
Citations by year
2026: 41 · 2025: 60 · 2024: 48 · 2023: 53 · 2022: 61 · 2021: 82 · 2020: 99 · 2019: 104 · 2018: 110 · 2017: 142 · 2016: 136 · 2015: 160 · 2014: 140 · 2013: 125 · 2012: 110
FWCI
50.83
Type
journal article
Language
en
Open access
Locations
  • Proceedings of the National Academy of Sciences (publishedVersion)
  • PubMed Central (publishedVersion)
  • PubMed (publishedVersion)
Funders
  • GlaxoSmithKline
  • Wellcome Trust
  • Engineering and Physical Sciences Research Council (EP/D001935/1)
Topics
  • Health Sciences › Medicine › Psychiatry and Mental health › Dementia and Cognitive Impairment Research
  • Health Sciences › Medicine › Physiology › Alzheimer's disease research and treatments
  • Life Sciences › Neuroscience › Cognitive Neuroscience › Functional Brain Connectivity Studies
Keywords
APOE ε4, APOE polymorphism, default mode network, resting-state brain activity, hippocampal activation, memory encoding, neurodegeneration risk
MeSH terms
Adult, Alleles, Brain, Female, Humans, Magnetic Resonance Imaging, Male, Memory, Apolipoprotein E4

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review