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Disabled‐2 exhibits the properties of a cargo‐selective endocytic clathrin adaptor
Open accessAbstract
Clathrin-coated pits at the cell surface select material for transportation into the cell interior. A major mode of cargo selection at the bud site is via the micro 2 subunit of the AP-2 adaptor complex, which recognizes tyrosine-based internalization signals. Other internalization motifs and signals, including phosphorylation and ubiquitylation, also tag certain proteins for incorporation into a coated vesicle, but the mechanism of selection is unclear. Disabled-2 (Dab2) recognizes the FXNPXY internalization motif in LDL-receptor family members via an N-terminal phosphotyrosine-binding (PTB) domain. Here, we show that in addition to binding AP-2, Dab2 also binds directly to phosphoinositides and to clathrin, assembling triskelia into regular polyhedral coats. The FXNPXY motif and phosphoinositides contact different regions of the PTB domain, but can stably anchor Dab2 to the membrane surface, while the distal AP-2 and clathrin-binding determinants regulate clathrin lattice assembly. We propose that Dab2 is a typical member of a growing family of cargo-specific adaptor proteins, including beta-arrestin, AP180, epsin, HIP1 and numb, which regulate clathrin-coat assembly at the plasma membrane by synchronizing cargo selection and lattice polymerization events.
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TL;DR
Dab2 binds AP-2, clathrin, and phosphoinositides, and can assemble clathrin triskelia into polyhedral coats on liposome templates. The authors propose Dab2 is a cargo-selective endocytic adaptor for FXNPXY-bearing cargo such as LDL-receptor family members.
Key findings
- Dab2’s central region binds AP-2 and clathrin: residues 206–368 are minimal for optimal AP-2 binding, while residues 206–258 bind clathrin; mutation of the type I clathrin-box 236LVDLN to AAALN nearly abolishes clathrin binding in the smallest fragment, and combined LVD→AAA/W→A mutation in 206–368 reduces clathrin binding 4- to 5-fold without affecting AP-2 binding.
- Dab2 binds preassembled clathrin cages and assembles soluble clathrin trimers into sedimentable polyhedral cages; GST–Dab2(1–368) recruits clathrin, and EM shows regular polyhedral clathrin cages, whereas the minimal clathrin-binding fragment GST–Dab2(206–258) does not increase clathrin recovery above background.
- The N-terminal PTB domain (residues 1–205) binds phosphoinositides; monomeric PTB binds ~25-fold better to PtdIns(4,5)P2 liposomes, rising from ~2% without phosphoinositide to >50% bound, and can bind phosphoinositides and an LDL-receptor FXNPXY peptide simultaneously.
- In COS-7 cells, overexpression of myc-Dab2 PTBx2 selectively blocks diI-LDL uptake during a 15 min pulse while transferrin uptake remains normal; in liposome assays, AP-2 plus GST–Dab2 leads to ~50% of total clathrin assembling onto sedimenting liposomes, with ~one-quarter of liposome-bound coat components resistant to 1% Triton X-100.
Methods
- In vitro binding assays used GST–Dab2 truncations and mutants immobilized on GSH–Sepharose incubated with rat brain cytosol, followed by SDS–PAGE and immunoblotting for AP-2 subunits and clathrin heavy/light chains.
- Clathrin assembly was tested by mixing purified clathrin with GST–Dab2 fusions, differential centrifugation, negative-stain EM, and liposome/monolayer assays with mixed lipids, phosphoinositides, purified AP-2, and clathrin; Triton X-100 extraction assessed coat assembly.
- Cell assays included immunofluorescence co-localization of Dab2 and epsin 1 in HeLa cells, and COS-7 transfection with myc-tagged Dab2 PTBx2 followed by diI-LDL and transferrin uptake; siRNA knockdown of Dab2 by >90% in HeLa cells did not inhibit diI-LDL uptake (not shown).
Limitations
- The paper states no explicit limitations section. It notes that siRNA knockdown of Dab2 by >90% in HeLa cells did not inhibit diI-LDL uptake, that no mutations in Dab2 have been linked to hypercholesterolemia, and that Dab2 is not expressed ubiquitously, with many ovarian and breast carcinomas failing to express it, suggesting possible compensation by other PTB-domain proteins.
- Evident from the text: many central assembly conclusions rely on in vitro assays with purified proteins and synthetic liposomes; PTBx2 overexpression may not reflect endogenous Dab2 function; some supporting data are “not shown”; and the anti-Dab2 antibody detects all three splice isoforms (p67, p93, p96), so distinct isoform locations cannot be concluded.
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Claims the paper makes
7 of 35 cited sources checked · 6 supported · 0 flagged · accuracy not yet measured
- Findingcitation§ Dab2 as an endocytic adaptor protein
Extensive clathrin recruitment does not disrupt the interaction between AP-2 and either Dab2 or epsin, AP180 or HIP1.
“Importantly, and in contrast to eps15 (Cupers et al., 1998), extensive clathrin recruitment does not disrupt the interaction between AP-2 and either Dab2 or epsin (Figure 8) (Mishra et al., 2001), AP180 (Ford et al., 2001) or HIP1 (Mishra et al., 2001), such that these proteins are now released from the membrane surface.”
Quote in the paperSubstantial claim1 of 3 sources checked - Findingown data§ Dab2 as an endocytic adaptor protein
Pre-incubating liposomes with a mixture of AP-2 and GST-Dab2 increases the recovery of both proteins in the liposome pellet.
“Pre-incubating liposomes together with a mixture of AP-2 and the GST±Dab2 fusion increases the recovery of both proteins in the liposome pellet (Figure 8C, lane h), validating the AP-2±Dab2 interactions seen in pull-down assays (Figures 1 and 2) (Morris and Cooper, 2001).”
Quote in the paperSubstantial claim1 of 1 sources checked- cites Morris and Cooper, 2001 source
- Interpretationcitation§ Dab2 and cargo recognition
Dab2 is linked to megalin endocytosis in the kidney in vivo.
“This links Dab2 to megalin endocytosis in the kidney in vivo.”
Quote in the paperSubstantial claim1 of 1 sources checked- cites Morris et al., 2002b source
- Premisecitation§ Dab2 and cargo recognition
Beta-arrestin appears to accompany heptahelical receptors into existing coated buds.
“This distinguishes this group of proteins from b-arrestin, which, despite also containing PtdIns(4,5)P 2 -, AP-2-and clathrinbinding determinants, appears to accompany heptahelical receptors into existing coated buds (Santini et al., 2002;Scott et al., 2002).”
Quote in the paperNot a substantial claim2 of 2 sources checked - Interpretationreasoning§ Dab2 and cargo recognition
Dab2 probably accompanies the clathrin-coated vesicle during budding and fission.
“These additional functional sequences argue that, like numb (Santolini et al., 2000), Dab2 probably accompanies the clathrin-coated vesicle during budding and ®ssion.”
Quote in the paperSubstantial claim1 of 1 sources checked- cites Santolini et al., 2000 source
- Findingown data§ Dab2 binds to phosphoinositides via the N-terminal PTB domain
Dab2 PTB association with phosphoinositide-containing mixed liposomes does not preclude NPXY sequence engagement.
“Dab2 PTB association with phosphoinositide-containing mixed liposomes does not preclude NPXY sequence engagement.”
Quote in the paperSubstantial claim - Findingown data§ Dab2 as an endocytic adaptor protein
Approximately one-quarter of the liposome-bound coat components are resistant to extraction with 1% Triton X-100.
“Approximately one-quarter of the liposome-bound coat components are resistant to extraction with 1% Triton X-100 (Figure 8C, lane j), which has been shown by others to correlate well with extensive assembly into curved polyhedral coats (Ford et al., 2001).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Ford et al., 2001 source
- Findingown data§ Dab2 interacts directly with clathrin triskelia
Simultaneous mutation of both the type I LVDLN and putative type II PWPYP sequences in GST-Dab2(206-368) reduces clathrin binding 4- to 5-fold in pull-down assays.
“Simultaneous mutation (LVD®AAA/ W®A) of both the type I LVDLN and putative type II PWPYP sequences in GST±Dab2(206±368) reduces clathrin binding 4-to 5-fold in pull-down assays.”
Quote in the paperSubstantial claim - Findingown data§ Dab2 as an endocytic adaptor protein
The clathrin-recruiting properties of Dab2 do not depend upon GST-mediated dimerization.
“Again, the clathrinrecruiting properties of Dab2 do not depend upon GSTmediated dimerization as monomeric Dab2(1±368), tethered to a mixed liposome surface, effectively recruits clathrin in a dose-dependent fashion (Figure 8D).”
Quote in the paperSubstantial claim - Findingown data§ Abstract
Dab2 binds directly to clathrin.
“Dab2 also binds directly to phosphoinositides and to clathrin”
- Also stated in: § Disabled-2 exhibits the properties of a cargo-selective endocytic clathrin adaptor · boosted
“Dab2 also binds robustly to clathrin, independently of the AP-2 association”
- Also stated in: § Dab2 interacts directly with clathrin triskelia · plain
“Dab2 binds to clathrin directly”
Quote in the paperSubstantial claim - Also stated in: § Disabled-2 exhibits the properties of a cargo-selective endocytic clathrin adaptor · boosted
- Findingown data§ Dab2 interacts directly with clathrin triskelia
Monomeric Dab2(1-368) effectively recruits soluble clathrin trimers onto a membrane surface.
“However, monomeric Dab2(1±368) effectively recruits soluble clathrin trimers onto a membrane surface (see Figure 8D).”
Quote in the paperSubstantial claim - Findingown data§ Dab2 interacts directly with clathrin triskelia
Isolated GST-Dab2(206-258) binds to pre-assembled clathrin cages in vitro.
“Indeed, isolated GST±Dab2(206±258) binds to pre-assembled clathrin in vitro and, upon centrifugation, is recovered together with the polyhedral cages in the pellet (Figure 3, lane j).”
Quote in the paperSubstantial claim - Findingown data§ Abstract
The Dab2 PTB domain binds directly to phosphoinositides.
“Dab2 also binds directly to phosphoinositides”
- Also stated in: § Dab2 binds to phosphoinositides via the N-terminal PTB domain · boosted
“the Dab2 PTB domain (amino acids 1±205) fused to GST binds robustly to phosphoinositide-containing membranes in a dose-dependent fashion (Figure 6A, lanes d and f).”
Quote in the paperSubstantial claim - Also stated in: § Dab2 binds to phosphoinositides via the N-terminal PTB domain · boosted
- Findingown data§ Dab2 interacts directly with clathrin triskelia
The minimal clathrin-binding Dab2 fusion GST-Dab2(206-258) does not increase clathrin recovery in the high-speed pellet above background.
“Despite binding to preassembled cages (Figure 3), the minimal clathrin-binding Dab2 fusion GST±Dab2(206±258) does not increase clathrin recovery in the high-speed pellet above background (lane i compared with c).”
Quote in the paperSubstantial claim - Findingown data§ Abstract
Dab2 assembles clathrin triskelia into regular polyhedral coats.
“assembling triskelia into regular polyhedral coats”
- Also stated in: § Dab2 interacts directly with clathrin triskelia · plain
“Electron microscope (EM) examination of the Dab2 assembled population after negative staining reveals regular assemblies of polyhedral clathrin cages (Figure 4B).”
Quote in the paperSubstantial claim- Rests on an assumption: The in vitro assembly of clathrin cages by Dab2 on liposome templates reflects the mechanism of clathrin-coated pit assembly at the plasma membrane.
- Also stated in: § Dab2 interacts directly with clathrin triskelia · plain
- Findingown data§ Dab2 interacts directly with clathrin triskelia
When GST-Dab2(1-368) is mixed with soluble clathrin trimers, a portion of both proteins is recovered in a high-speed pellet after dialysis.
“Similarly, if a GST±Dab2(1±368) fusion is mixed with soluble clathrin trimers, a portion of both proteins is recovered in a high-speed pellet after dialysis into either MES±OH buffer (pH 6.8; not shown) or a more physiological assay buffer (pH 7.2; Figure 4A, lane o).”
Quote in the paperSubstantial claim - Findingown data§ Abstract
The FXNPXY motif and phosphoinositides contact different regions of the Dab2 PTB domain.
“The FXNPXY motif and phosphoinositides contact different regions of the PTB domain”
- Also stated in: § Dab2 binds to phosphoinositides via the N-terminal PTB domain · plain
“Dab2 PTB association with phosphoinositide-containing mixed liposomes does not preclude NPXY sequence engagement.”
Quote in the paperSubstantial claim - Also stated in: § Dab2 binds to phosphoinositides via the N-terminal PTB domain · plain
- Findingown data§ Dab2 binds to phosphoinositides via the N-terminal PTB domain
Addition of a 3- to 5-fold molar excess of a peptide corresponding to residues 2-22 of the LDL receptor cytosolic domain does not diminish the extent of monomeric PTB domain association with liposomes.
“Addition of a 3-to 5-fold molar excess of a peptide corresponding to residues 2±22 of the LDL receptor cytosolic domain ( 814 NWRLKNINSIFDNPVYQKTT) does not diminish the extent of monomeric PTB domain association with the liposomes (Figure 6D, lane d compared with b).”
Quote in the paperSubstantial claim- Rests on an assumption: The LDL receptor cytosolic domain peptide used in binding assays represents the intact LDL receptor's FXNPXY internalization motif.
- Findingown data§ Dab2 as an endocytic adaptor protein
When clathrin is added, substantially more, about 50% of total, assembles onto the sedimenting liposomes.
“When clathrin is then added, substantially more (~50% of total) assembles onto the sedimenting liposomes (Figure 8C, lane h compared with d and f).”
Quote in the paperSubstantial claim - Findingown data§ Dab2 binds to phosphoinositides via the N-terminal PTB domain
The monomeric Dab2 PTB domain binds approximately 25-fold better to PtdIns(4,5)P2 liposomes, rising from about 2% without phosphoinositide to more than 50% bound.
“The monomeric PTB domain, cleaved from GST with thrombin, binds ~25-fold better to PtdIns(4,5)P 2 liposomes, rising from ~2% without phosphoinositide to >50% bound (Figure 6B, lanes a, b compared with e, f).”
Quote in the paperSubstantial claim - Findingown data§ Results
Amino acids 206-368 of murine Dab2 are the minimal sequence required for optimal AP-2 binding in pull-down assays.
“Amino acids 206±368 is the minimal sequence required for optimal AP-2 binding in pull-down-type assays (Figure 1B, lanes f).”
Quote in the paperSubstantial claim - Findingown data§ Dab2 as an endocytic adaptor protein
GST-Dab2(1-368) binds efficiently to mixed liposomes containing low levels of phosphoinositides.
“Like the PTB domain alone, GST±Dab2(1±368) binds ef®ciently to mixed liposomes containing low levels of phosphoinositides (see Figure 8C, lane f).”
Quote in the paperSubstantial claim - Findingown data§ Immuno¯uorescence analysis
Dab2 co-localizes with epsin 1 at the plasma membrane.
“Dab2 co-localizes with epsin 1 at the plasma membrane.”
- Also stated in: § Immuno¯uorescence analysis · plain
“Single 0.3 mm confocal sections of the ventral surface (D) and the medial region of the cell (E) through the nucleus (N) show Dab2 co-localized with epsin at the cell surface (arrows).”
Quote in the paperNot a substantial claim - Also stated in: § Immuno¯uorescence analysis · plain
- Findingown data§ Immuno¯uorescence analysis
Dab2 co-operates with AP-2 to drive the assembly of invaginated clathrin buds upon lipid membranes.
“Dab2 co-operates with AP-2 to drive the assembly of invaginated clathrin buds upon lipid membranes.”
Quote in the paperSubstantial claim - Findingown data§ Immuno¯uorescence analysis
The PTB domain of Dab2 binds to phosphoinositides and FXNPXF internalization motifs synchronously.
“The PTB domain of Dab2 binds to phosphoinositides and FXNPXF internalization motifs synchronously.”
Quote in the paperSubstantial claim - Findingown data§ Immuno¯uorescence analysis
The PTB domain of Dab2 binds to polyphosphoinositides.
“The PTB domain of Dab2 binds to polyphosphoinositides.”
Quote in the paperSubstantial claim - Findingown data§ Immuno¯uorescence analysis
Dab2 associates directly with assembled clathrin cages.
“Dab2 associates directly with assembled clathrin cages.”
Quote in the paperSubstantial claim - Findingnone given§ Dab2 and cargo recognition
Overexpression of a single Dab2 PTB domain has negligible effect on LDL uptake.
“As overexpression of a single Dab2 PTB domain has negligible effect on LDL uptake, we believe that Dab2 normally encounters FXNPXY-bearing cargo in the context of an assembling coated bud.”
Quote in the paperSubstantial claim - Findingcitation§ Dab2 and cargo recognition
Dab2 contains multiple NPF triplets, the EH domain ligand.
“Like epsin, Dab2 also contains multiple NPF triplets, the EH domain ligand (de Beer et al., 2000).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites de Beer et al., 2000
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Findingown data§ Immuno¯uorescence analysis
Dab2 assembles soluble clathrin trimers into spherical polyhedral cages.
“Dab2 assembles soluble clathrin trimers into spherical polyhedral cages.”
Quote in the paperSubstantial claim - Findingown data§ Immuno¯uorescence analysis
There is a clathrin-binding region within Dab2.
“A clathrin-binding region within Dab2.”
Quote in the paperSubstantial claim - Findingown data§ Dab2 and cargo recognition
siRNA knockdown of Dab2 levels by more than 90% in HeLa cells does not inhibit diI-LDL uptake.
“siRNA knockdown of Dab2 levels by >90% in HeLa cells does not inhibit diI-LDL uptake (not shown).”
Quote in the paperSubstantial claim - Interpretationown data§ Abstract
The distal AP-2 and clathrin-binding determinants of Dab2 regulate clathrin lattice assembly.
“while the distal AP-2 and clathrin-binding determinants regulate clathrin lattice assembly”
Quote in the paperSubstantial claim - Interpretationown data§ Dab2 interacts directly with clathrin triskelia
Dab2 contains multiple, tandemly arrayed clathrin-binding sequences.
“These experiments clearly indicate that Dab2 contains multiple, tandemly arrayed clathrin-binding sequences.”
Quote in the paperSubstantial claim - Interpretationreasoning§ Abstract
The FXNPXY motif and phosphoinositides can stably anchor Dab2 to the membrane surface.
“but can stably anchor Dab2 to the membrane surface”
Quote in the paperSubstantial claim - Interpretationown data§ Dab2 binds to phosphoinositides via the N-terminal PTB domain
The Dab2 PTB domain can engage the LDL receptor family FXNPXY internalization motif in vivo.
“These results verify the capacity of the Dab2 PTB domain to engage the LDL receptor family FXNPXY internalization motif in vivo.”
Quote in the paperSubstantial claim - Premisecitation§ Disabled-2 exhibits the properties of a cargo-selective endocytic clathrin adaptor
Dab2 binds AP-2 directly via a central portion that engages the AP-2 alpha-subunit appendage.
“Dab2 binds to AP-2 directly via a central portion that, like epsin, AP180 and HIP1, engages the independently folded appendage domain of the AP-2 a-subunit (Morris and Cooper, 2001).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Morris and Cooper, 2001 source
Checked before — its earlier verdict is held back until a new check runs.
- Interpretationown data§ Dab2 as an endocytic adaptor protein
The N-terminal PTB domain of Dab2 can engage both PtdIns(4,5)P2 and select cargo molecules simultaneously.
“We interpret our ®ndings to indicate that the N-terminal PTB domain of Dab2 can engage both PtdIns(4,5)P 2 and select cargo molecules simultaneously.”
Quote in the paperSubstantial claim - Interpretationreasoning§ Dab2 as an endocytic adaptor protein
The common properties of Dab2, epsin, AP180 and HIP1 suggest that they can play functionally similar roles during clathrin-coat assembly, distinct from eps15.
“The common properties of Dab2, epsin, AP180 and HIP1 suggest that they can play functionally similar roles during clathrin-coat assembly, distinct from eps15.”
Quote in the paperSubstantial claim - Interpretationnone given§ Immuno¯uorescence analysis
Disabled-2 is a cargo-specific adaptor protein.
“Disabled-2 is a cargo-speci®c adaptor protein”
Quote in the paperNot a substantial claim - Interpretationreasoning§ Dab2 and cargo recognition
Dab2 is capable of establishing a complex web of protein-protein interactions at the clathrin bud site.
“Dab2 is, therefore, capable of establishing a complex web of protein±protein interactions at the clathrin bud site.”
Quote in the paperSubstantial claim - Premisecitation§ Dab2 and cargo recognition
The Dab2 PTB domain directly associates with Smad2/3.
“Direct association of the Dab2 PTB domain with Smad2/3 has been reported (Hocevar et al., 2001).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Hocevar et al., 2001 source
Checked before — its earlier verdict is held back until a new check runs.
- Interpretationcitation§ Dab2 and cargo recognition
The phenotype of Dab2 nullizygous mice supports a role for Dab2 in endocytosis.
“The phenotype of Dab2 nullizygous mice also supports a role for Dab2 in endocytosis.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Morris et al., 2002b source
Checked before — its earlier verdict is held back until a new check runs.
- Interpretationreasoning§ Dab2 and cargo recognition
Dab2 may participate in more sorting events than only those involving LDL receptor family members.
“Finally, Dab2 may participate in more sorting events than only those involving LDL receptor family members.”
Quote in the paperSubstantial claim - Interpretationreasoning§ Dab2 and cargo recognition
Dab2 potentiates AP-2-driven coat formation.
“Rather, like epsin and AP180, it potentiates AP-2-driven coat formation, perhaps also determining vesicle size.”
Quote in the paperSubstantial claim - Interpretationcitation§ Discussion
LDL receptor uptake might depend on alternate endocytic machinery.
“This suggests that LDL receptor uptake might depend on alternate endocytic machinery.”
Quote in the paperSubstantial claim - Interpretationreasoning§ Dab2 and cargo recognition
AP180, epsin, HIP1 and Dab2 can be viewed as a general class of functionally similar cargo sorters, each dedicated to selection of certain cargo to the bud site.
“Importantly, our identi®cation of AP180, epsin, HIP1 and Dab2 as putative adaptors, each dedicated to selection of certain cargo to the bud site, clari®es our understanding of clathrin-coat assembly; we believe that these proteins can now be viewed as a general class of functionally similar cargo sorters.”
Quote in the paperSubstantial claim - Interpretationown data§ Dab2 and cargo recognition
Each of epsin, AP180, HIP1 and Dab2 is likely to be found within a single forming bud.
“Each of these proteins is likely to be found within a single forming bud (Figure 5).”
Quote in the paperSubstantial claim - Interpretationown data§ Dab2 and cargo recognition
Dab2 normally encounters FXNPXY-bearing cargo in the context of an assembling coated bud.
“As overexpression of a single Dab2 PTB domain has negligible effect on LDL uptake, we believe that Dab2 normally encounters FXNPXY-bearing cargo in the context of an assembling coated bud.”
Quote in the paperSubstantial claim - Interpretationcitation§ Dab2 and cargo recognition
The PtdIns(4,5)P2-, AP-2- and clathrin-binding properties facilitate Dab2 placement at the bud site.
“The PtdIns(4,5)P 2 -, AP-2-and clathrin-binding properties will facilitate Dab2 placement at the bud site, as do analogous determinants in AP180, epsin and HIP1 (Ford et al., 2001;Mishra et al., 2001).”
Quote in the paperSubstantial claim0 of 2 sources checked - Interpretationcitation§ Dab2 and cargo recognition
NPXY-driven internalization might be augmented by also engaging the AP-2 complex at the bud site.
“This suggests that NPXY-driven internalization might be augmented by also engaging the AP-2 complex at the bud site.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Li et al., 2001
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Interpretationcitation§ Dab2 and cargo recognition
Dab2 probably plays an important role in targeting myosin VI to clathrin-coated vesicles.
“Myosin VI is a component of some clathrin-coated vesicles (Buss et al., 2001) and Dab2 probably plays an important role in targeting this motor to the vesicle.”
Quote in the paperNot a substantial claim0 of 3 sources checked
- Probably not a substantial claim. 14
- It may state two separate claims as one. 12
Probably not a substantial claim. The paper’s conclusions may not depend on it.
Premisecitation§ Dab2 and cargo recognitionThe CSF-1 receptor utilizes ubiquitin as an endocytic signal.
“The CSF-1 receptor utilizes ubiquitin as an endocytic signal (Lee et al., 1999), but the NPF triplets in Dab2 could recruit eps15, which, like epsin, can bind ubiquitin directly (Polo et al., 2002).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites Lee et al., 1999 source
In “Cbl-targeted CSF-1R multiubiquitination” (page unavailable), the paper reports that CSF-1R is ubiquitinated before endocytosis and suggests that multiubiquitination may promote it. It explicitly says it is unclear whether ubiquitination of Cbl, the receptor, or both is required for internalization, so it does not establish that ubiquitin on CSF-1R serves as the endocytic signal. (LLM, conf=0.88)
Experimental — accuracy not yet measured
It may state two separate claims as one.
Findingown data§ Dab2 binds to phosphoinositides via the N-terminal PTB domainThe Dab2 PTB domain displays a preference for PtdIns(4,5)P2, although there is binding to several phosphoinositides in protein-lipid overlays.
“Protein±lipid overlays reveal that the Dab2 PTB domain displays a preference for PtdIns(4,5)P 2 , although there is binding to several phosphoinositides in this type of assay (Figure 6C).”
Quote in the paperSubstantial claimIt may state two separate claims as one.
Findingcitation§ Dab2 as an endocytic adaptor proteinOriented on a 10% PtdIns(4,5)P2-containing monolayer, GST-Dab2(1-368) recruits soluble clathrin and drives the formation of regular polyhedral structures.
“Oriented in this way upon a 10% PtdIns(4,5)P 2 -containing monolayer of mixed lipids (Ford et al., 2001), the protein is able to recruit soluble clathrin and drive the formation of regular polyhedral structures (Figure 8A and B), which, alone, does not associate with the monolayer (Figure 8A, inset, see C, lane b).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Ford et al., 2001 source
- Rests on an assumption: The in vitro assembly of clathrin cages by Dab2 on liposome templates reflects the mechanism of clathrin-coated pit assembly at the plasma membrane.
It may state two separate claims as one.
Findingown data§ Dab2 binds to phosphoinositides via the N-terminal PTB domainIn HeLa cells, epsin 1 and Dab2 show extensive co-localization at steady state, indicating that the two proteins are probably present within common clathrin-coated structures.
“Indeed, in HeLa cells, epsin 1 and Dab2 show extensive co-localization at steady state (Figure 5), indicating that the two proteins are probably present within common clathrin-coated struc-tures.”
Quote in the paperSubstantial claimIt may state two separate claims as one.
Findingown data§ Dab2 binds to phosphoinositides via the N-terminal PTB domainPTBx2-expressing COS-7 cells are unable to internalize diI-LDL during a 15 min pulse but take up transferrin normally compared with surrounding untransfected cells.
“PTBx2-expressing cells, unable to internalize diI-LDL during a 15 min pulse, nevertheless take up transferrin normally compared with the surrounding, untransfected cells (Figure 7E±H).”
Quote in the paperSubstantial claimIt may state two separate claims as one.
Findingown data§ ResultsRemoval of the FXDXF motif has no discernible effect on AP-2 binding, indicating that this sequence is not critical for the alpha-appendage association measured by these assays.
“Surprisingly, the removal of the FXDXF motif has no discernible effect on AP-2 binding, indicating that this sequence is not critical for the a-appendage association measured by these assays.”
Quote in the paperSubstantial claimProbably not a substantial claim. The paper’s conclusions may not depend on it.
Findingown data§ Immuno¯uorescence analysisThe intracellular distribution of Dab2 appears to alter with the cell cycle.
“we note that the intracellular distribution of Dab2 appears to alter with the cell cycle.”
Quote in the paperNot a substantial claimIt may state two separate claims as one.
Findingown data§ Immuno¯uorescence analysisDab2 binds to both the AP-2 adaptor complex and clathrin.
“Dab2 binds to both the AP-2 adaptor complex and clathrin.”
Quote in the paperSubstantial claimIt may state two separate claims as one.
Findingown data§ Immuno¯uorescence analysisA stable ~25 kDa thrombin degradation product of the Dab2 PTB domain binds phosphoinositides and reacts with anti-Dab2 mAb 52.
“The asterisk denotes a stable ~25 kDa thrombin degradation product that binds phosphoinositides and reacts with the anti-Dab2 mAb 52.”
Quote in the paperSubstantial claimIt may state two separate claims as one.
Interpretationreasoning§ AbstractDab2 is a typical member of a family of cargo-specific adaptor proteins including beta-arrestin, AP180, epsin, HIP1 and numb, which regulate clathrin-coat assembly at the plasma membrane by synchronizing cargo selection and lattice polymerization.
“We propose that Dab2 is a typical member of a growing family of cargo-speci®c adaptor proteins, including b-arrestin, AP180, epsin, HIP1 and numb, which regulate clathrin-coat assembly at the plasma membrane by synchronizing cargo selection and lattice polymerization events.”
Quote in the paperSubstantial claimIt may state two separate claims as one.
Interpretationown data§ Dab2 as an endocytic adaptor proteinThe behavior of GST-Dab2 closely parallels that of GST-epsin 1(1-407) in these assays, showing that Dab2 can function analogously to known endocytic accessory proteins.
“The behavior of GST±Dab2 closely parallels that of a GST±epsin 1(1±407) fusion in these assays (Figure 8C, lanes k±n), showing that Dab2 can function analogously to known endocytic accessory proteins (Chen et al., 1998;Yamabhai et al., 1998;Drake et al., 2000;Mishra et al., 2001).”
Quote in the paperSubstantial claim0 of 3 sources checkedIt may state two separate claims as one.
Interpretationown data§ Dab2 interacts directly with clathrin triskeliaThe interaction of Dab2 residues 206-258 with clathrin is largely independent of the AP-2 adaptor complex and may be direct.
“As little AP-2 binds to the GST±Dab2 (206±258) protein (lanes d), the interaction with clathrin is largely independent of the adaptor complex and may well be direct.”
Quote in the paperSubstantial claimProbably not a substantial claim. The paper’s conclusions may not depend on it.
Premisecitation§ Dab2 and cargo recognitionHuntingtin has been localized to clathrin-coated structures and endosomes.
“A potential cargo for HIP1 is huntingtin, which interacts with the N-terminal segment of HIP1 (Wanker et al., 1997) and has been localized to clathrin-coated structures and endosomes (Velier et al., 1998).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Velier et al., 1998 source
Probably not a substantial claim. The paper’s conclusions may not depend on it.
Premisecitation§ Dab2 and cargo recognitionA potential cargo for HIP1 is huntingtin.
“A potential cargo for HIP1 is huntingtin, which interacts with the N-terminal segment of HIP1 (Wanker et al., 1997) and has been localized to clathrin-coated structures and endosomes (Velier et al., 1998).”
Quote in the paperNot a substantial claim0 of 2 sources checkedProbably not a substantial claim. The paper’s conclusions may not depend on it.
Premisecitation§ Dab2 and cargo recognitionEpsin might be part of the machinery that recognizes ubiquitin as an endocytic signal.
“Epsin might be part of the long-sought-after machinery that recognizes ubiquitin as an endocytic signal (Polo et al., 2002).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Polo et al., 2002 source
Probably not a substantial claim. The paper’s conclusions may not depend on it.
Premisecitation§ Dab2 and cargo recognitionHuntingtin interacts with the N-terminal segment of HIP1.
“A potential cargo for HIP1 is huntingtin, which interacts with the N-terminal segment of HIP1 (Wanker et al., 1997) and has been localized to clathrin-coated structures and endosomes (Velier et al., 1998).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Wanker et al., 1997 source
Probably not a substantial claim. It may be too vague to check against evidence. The paper’s conclusions may not depend on it.
Interpretationreasoning§ Dab2 and cargo recognitionThese multifaceted connections may be a critical aspect of ensuring the fidelity of cargo incorporation into assembling coated buds.
“These multifaceted connections may be a critical aspect of ensuring the ®delity of cargo incorporation into assembling coated buds.”
Quote in the paperNot a substantial claimProbably not a substantial claim. The paper’s conclusions may not depend on it.
Premisecitation§ Dab2 and cargo recognitionDab2 was initially identified as a prominent phosphoprotein accompanying CSF-1 receptor activation.
“The protein was initially identi®ed as a prominent phosphoprotein accompanying colony-stimulating factor-1 (CSF-1) receptor activation (Xu et al., 1995).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Xu et al., 1995
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Probably not a substantial claim. The paper’s conclusions may not depend on it.
Premisecitation§ Dab2 and cargo recognitionEps15 can bind ubiquitin directly.
“The CSF-1 receptor utilizes ubiquitin as an endocytic signal (Lee et al., 1999), but the NPF triplets in Dab2 could recruit eps15, which, like epsin, can bind ubiquitin directly (Polo et al., 2002).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Polo et al., 2002 source
Probably not a substantial claim. The paper’s conclusions may not depend on it.
Premisecitation§ Dab2 and cargo recognitionMammalian EH domain-containing proteins include eps15, intersectin, POB-1 and EHD1.
“Mammalian EH domain-containing proteins include eps15, intersectin, POB-1 and EHD1 (Santolini et al., 1999).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Santolini et al., 1999 source
It may state two separate claims as one.
Interpretationown data§ Dab2 and cargo recognitionOther PTB domain proteins might compensate or substitute for Dab2 loss, and thus Dab2 would not be singularly responsible for LDL receptor incorporation into clathrin-coated vesicles.
“This suggests that other PTB domain proteins might compensate or substitute for Dab2 loss, and thus Dab2 would not be singularly responsible for LDL receptor incorporation into clathrincoated vesicles.”
Quote in the paperSubstantial claimIt may state two separate claims as one.
Premisecitation§ Dab2 and cargo recognitionDab2 is implicated in TGF-beta receptor activation and downstream Smad activation.
“Dab2 is also implicated in transforming growth factor b (TGF-b) receptor activation and downstream Smad activation (Hocevar et al., 2001).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Hocevar et al., 2001 source
Checked before — its earlier verdict is held back until a new check runs.
Probably not a substantial claim. The paper’s conclusions may not depend on it.
Interpretationreasoning§ Dab2 and cargo recognitionDab2 may also determine vesicle size.
“Rather, like epsin and AP180, it potentiates AP-2-driven coat formation, perhaps also determining vesicle size.”
Quote in the paperNot a substantial claimProbably not a substantial claim. The paper’s conclusions may not depend on it.
Premisecitation§ Dab2 and cargo recognitionAP180 could actively cluster synaptobrevin/VAMP.
“AP180 could actively cluster synaptobrevin/VAMP (Nonet et al., 1999).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Nonet et al., 1999 source
Checked before — its earlier verdict is held back until a new check runs.
Probably not a substantial claim. The paper’s conclusions may not depend on it.
Interpretationcitation§ Dab2 and cargo recognitionThe NPF triplets in Dab2 could recruit eps15.
“The CSF-1 receptor utilizes ubiquitin as an endocytic signal (Lee et al., 1999), but the NPF triplets in Dab2 could recruit eps15, which, like epsin, can bind ubiquitin directly (Polo et al., 2002).”
Quote in the paperNot a substantial claimProbably not a substantial claim.
Premisecitation§ Dab2 and cargo recognitionSmad2 and Smad3 activation by liganded TGF-beta receptors occurs only post-endocytic internalization.
“Intriguingly, Smad2 and Smad3 activation by liganded TGF-b receptors occurs only post-endocytic internalization (Penheiter et al., 2002), raising the possibility that Dab2, acting at the coated vesicle, coordinates aspects of TGF-b signaling.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Penheiter et al., 2002 source
The paper relies on this without support.
The in vitro assembly of clathrin cages by Dab2 on liposome templates reflects the mechanism of clathrin-coated pit assembly at the plasma membrane.
“With synthetic liposome templates, Dab2 drives clathrin-coat assembly in the presence of puri®ed AP-2 and clathrin and, consequently, displays all the properties of a cargo-speci®c adaptor protein.”
The paper relies on this without support.
The LDL receptor cytosolic domain peptide used in binding assays represents the intact LDL receptor's FXNPXY internalization motif.
“Addition of a 3-to 5-fold molar excess of a peptide corresponding to residues 2±22 of the LDL receptor cytosolic domain ( 814 NWRLKNINSIFDNPVYQKTT) does not diminish the extent of monomeric PTB domain association with the liposomes (Figure 6D, lane d compared with b).”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Some PTB domains, including the domain in ARH, bind phosphoinositides.
“some PTB domains, including the domain in ARH, bind phosphoinositides (8,11,12).”
From The Modular Adaptor Protein ARH Is Required for Low Density Lipoprotein (LDL) Binding and Internalization but Not for LDL Receptor Clustering in Coated Pits (2004) · cites this paper as [12]
The section “Dab2 binds to phosphoinositides via the N-terminal PTB domain” reports phosphoinositide binding by several PTB domains and demonstrates it for Dab2. The “Dab2 and cargo recognition” section discusses ARH’s related PTB domain, but does not say that ARH’s domain binds phosphoinositides. (LLM, conf=0.88)
Experimental — accuracy not yet measuredCoated pits contain many potential binding partners for LDLR including AP2, PTB domain-containing adaptor proteins such as Dab2, and the clathrin heavy chain.
“In accordance with this mechanism, coated pits contain many potential binding partners for LDLR including AP2 (34), PTB domain-containing adaptor proteins such as Dab2 (12,28) and the clathrin heavy chain (35).”
From The Modular Adaptor Protein ARH Is Required for Low Density Lipoprotein (LDL) Binding and Internalization but Not for LDL Receptor Clustering in Coated Pits (2004) · cites this paper as [12]
Through its PTB domain, Dab2 mediates attachment of cargos containing transmembrane proteins with an NPXY motif, such as LDL receptor, EGF receptor, megalin, and integrins, to clathrin coats.
“Through its PTB domain, Dab2 mediates the attachment of cargos containing transmembrane proteins with an NPXY motif, such as the LDL receptor, EGF receptor, megalin, and integrins, to clathrin coats”
From Endocytosis and Physiology: Insights from Disabled-2 Deficient Mice (2016) · cites this paper as Mishra et al., 2002
Dab2 is potentially an LDLR-selective endocytic clathrin adaptor.
“Another endocytic clathrin adaptor, Disabled-2 (Dab2), is potentially an LDLR-selective adaptor”
From Endocytic adaptors Arh and Dab2 control homeostasis of circulatory cholesterol (2016) · cites this paper as [22]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
Each contradiction between two passages listed here was confirmed by an independent check.
Figure 6 caption names a different internalization motif
MinorThe Figure 6D caption says the PTB domain binds FXNPXF motifs, whereas the text identifies the motif as FXNPXY. The peptide tested in that figure also contains the FXNPXY sequence.
“(D) The PTB domain of Dab2 binds to phosphoinositides and FXNPXF internalization motifs synchronously.”
“Dab2 PTB association with phosphoinositide-containing mixed liposomes does not preclude NPXY sequence engagement.Addition of a 3-to 5-fold molar excess of a peptide corresponding to residues 2±22 of the LDL receptor cytosolic domain ( 814 NWRLKNINSIFDNPVYQKTT)”
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Regulated portals of entry into the cell
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Metadata
- Authors
- Mishra, S. K., Keyel, P. A., Hawryluk, M. J., Agostinelli, N. R., Watkins, S. C., & Traub, L. M.
- Affiliations
- University of Pittsburgh (US)
- Corresponding author
- Traub, Linton M.
- Venue
- The EMBO Journal
- Published
- 2002-09-16
- Volume
- 21
- Issue
- 18
- Pages
- 4915-4926
- ISSN
- 0261-4189 (ISSN-L)
- 1460-2075
- PMC
- PMC126284
- OpenAlex
- W1983921682
- Semantic Scholar
- f2627d366f380de384fe68eee4a251f9a7898e0d
- Cited by
- 302
- References
- 68
- Citations by year
- 2026: 4 · 2025: 4 · 2024: 2 · 2023: 1 · 2022: 8 · 2021: 10 · 2020: 6 · 2019: 5 · 2018: 4 · 2017: 5 · 2016: 8 · 2015: 15 · 2014: 10 · 2013: 16 · 2012: 12
- FWCI
- 7.14
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- The EMBO Journal (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Institutes of Health
- National Institute of Diabetes and Digestive and Kidney Diseases (R01DK053249)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular transport and secretion
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Caveolin-1 and cellular processes
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Biotin and Related Studies
- Keywords
- Disabled-2, clathrin adaptor proteins, clathrin-coated pits, cargo selection, phosphoinositides, phosphotyrosine binding domain, AP-2, membrane internalization, clathrin-coated vesicles
- MeSH terms
- Amino Acid Sequence, Animals, Biological Transport, Carrier Proteins, Clathrin, Endocytosis, Fluorescent Dyes, HeLa Cells, Humans, Molecular Sequence Data, Neuropeptides, Peptides, Phosphatidylinositols, Protein Binding, Proteins, Receptors, LDL, Recombinant Fusion Proteins, Genes, Tumor Suppressor, Genes, Reporter, COS Cells, Amino Acid Motifs, Tumor Suppressor Proteins, Vesicular Transport Proteins, Adaptor Proteins, Vesicular Transport, Adaptor Protein Complex 2, Adaptor Proteins, Signal Transducing, Apoptosis Regulatory Proteins, Mice
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