Mediterranean Diet intervention alters the gut microbiome in older people reducing frailty and improving health status: the NU-AGE 1-year dietary intervention across five European countries
Open accessAbstract
OBJECTIVE: Ageing is accompanied by deterioration of multiple bodily functions and inflammation, which collectively contribute to frailty. We and others have shown that frailty co-varies with alterations in the gut microbiota in a manner accelerated by consumption of a restricted diversity diet. The Mediterranean diet (MedDiet) is associated with health. In the NU-AGE project, we investigated if a 1-year MedDiet intervention could alter the gut microbiota and reduce frailty. DESIGN: We profiled the gut microbiota in 612 non-frail or pre-frail subjects across five European countries (UK, France, Netherlands, Italy and Poland) before and after the administration of a 12-month long MedDiet intervention tailored to elderly subjects (NU-AGE diet). RESULTS: Adherence to the diet was associated with specific microbiome alterations. Taxa enriched by adherence to the diet were positively associated with several markers of lower frailty and improved cognitive function, and negatively associated with inflammatory markers including C-reactive protein and interleukin-17. Analysis of the inferred microbial metabolite profiles indicated that the diet-modulated microbiome change was associated with an increase in short/branch chained fatty acid production and lower production of secondary bile acids, p-cresols, ethanol and carbon dioxide. Microbiome ecosystem network analysis showed that the bacterial taxa that responded positively to the MedDiet intervention occupy keystone interaction positions, whereas frailty-associated taxa are peripheral in the networks. CONCLUSION: Collectively, our findings support the feasibility of improving the habitual diet to modulate the gut microbiota which in turn has the potential to promote healthier ageing.
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The microbiome appears to be influenced by diet.
“the microbiome appears to be influenced by exercise 118 and diet 119”
From A meta-review of "lifestyle psychiatry": the role of exercise, smoking, diet and sleep in the prevention and treatment of mental disorders (2020) · cites this paper as [119]
A significant body of evidence demonstrates that consuming a GM-favorable diet can positively influence the GM, improve health status, and enhance cognitive function.
“A comprehensive review of this topic is beyond the scope of this review, however, a significant body of evidence demonstrates that consuming a GM-favorable diet can positively influence the GM, improve health status, and enhance cognitive function (506–510).”
From Signalling cognition: The gut microbiota and hypothalamic-pituitary-adrenal axis (2023) · cites this paper as [508]
The positive effects of a GM-favorable diet are likely due to the availability of prebiotics, probiotics, SCFAs, and polyphenols.
“This is likely due to the availability of prebiotics, probiotics, SCFAs, and polyphenols.”
From Signalling cognition: The gut microbiota and hypothalamic-pituitary-adrenal axis (2023) · cites this paper as [508]
Large epidemiological studies have implicated dietary factors in some psychiatric disorders as risk factors and potential therapies.
“a number of large epidemiological studies have implicated dietary factors in some of these disorders [1–5], both in terms of risk factors [6] as well as potential therapies [2, 5, 7].”
From Role of diet and its effects on the gut microbiome in the pathophysiology of mental disorders (2022) · cites this paper as [6]
Mediterranean-like diets can promote healthy brain function as demonstrated in a variety of dietary intervention trials in depression and in cognitive decline.
“Such Mediterranean-like diets can promote healthy brain function as demonstrated in a variety of dietary intervention trials in depression and in cognitive decline [1–3, 6].”
From Role of diet and its effects on the gut microbiome in the pathophysiology of mental disorders (2022) · cites this paper as [6]
In the NUAGE study, dietary adherence to a Mediterranean diet was correlated with specific bacterial taxa which were negatively associated with inflammatory markers and also positively associated with markers of low frailty.
“Results of this study showed that dietary adherence to a Mediterranean diet was correlated with specific bacterial taxa which were negatively associated with inflammatory markers and also positively associated with markers of low frailty.”
From Role of diet and its effects on the gut microbiome in the pathophysiology of mental disorders (2022) · cites this paper as [6]
In the human NU-AGE cohort, adherence to the Mediterranean diet in elderly subjects was associated with microbial taxa that were positively correlated with markers of healthy aging, including improved cognitive function.
“In the human European Project on Nutrition in Elderly People (NU-AGE) cohort, adherence to the Mediterranean diet in elderly subjects was associated with microbial taxa that were positively correlated with markers of healthy aging, including improved cognitive function (300).”
From Diet and the Microbiota–Gut–Brain Axis: Sowing the Seeds of Good Mental Health (2021) · cites this paper as [300]
In the NU-AGE cohort, Mediterranean diet-induced increases in microbial taxa were associated with improved cognition and reduced risk of frailty and inflammation in elderly individuals who followed a customized Mediterranean diet for 12 months.
“In the NU-AGE cohort, Mediterranean diet-induced increases in microbial taxa were associated with improved cognition and reduced risk of frailty and inflammation in elderly individuals who followed a customized Mediterranean diet for 12 mo (300).”
From Diet and the Microbiota–Gut–Brain Axis: Sowing the Seeds of Good Mental Health (2021) · cites this paper as [300]
Consumption of a diet high in fibres, polyphenols, and unsaturated fatty acids can promote gut microbial taxa which can metabolise these food sources into anti-inflammatory metabolites, such as short chain fatty acids, while lowering the production of secondary bile acids and p-cresol.
“Conversely, the consumption of a diet high in fibres, polyphenols, and unsaturated fatty acids (as found in a Mediterranean diet) can promote gut microbial taxa which can metabolise these food sources into anti-inflammatory metabolites,15 28 such as short chain fatty acids, while lowering the production of secondary bile acids and p-cresol.”
From Food and mood: How do diet and nutrition affect mental wellbeing? (2020) · cites this paper as [28]
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Cites
Cytoscape: A software Environment for integrated models of biomolecular interaction networks
Shannon, P., Markiel, A., Ozier, O., Baliga, N. S., Wang, J. T., Ramage, D., Amin, N., Schwikowski, B., & Ideker, T. (2003) · Genome Research · doi:10.1101/gr.1239303 · Cited by 51,888 · see citing works
Search and clustering orders of magnitude faster than BLAST
Edgar, R. C. (2010) · Bioinformatics · doi:10.1093/bioinformatics/btq461 · Cited by 20,617 · see citing works
Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
Wang, Q., Garrity, G. M., Tiedje, J. M., & Cole, J. R. (2007) · Applied and Environmental Microbiology · doi:10.1128/aem.00062-07 · Cited by 19,770 · see citing works
FLASH: fast length adjustment of short reads to improve genome assemblies
Magoč, T., & Salzberg, S. L. (2011) · Bioinformatics · doi:10.1093/bioinformatics/btr507 · Cited by 15,366 · see citing works
UCHIME improves sensitivity and speed of chimera detection
Edgar, R. C., Haas, B. J., Clemente, J. C., Quince, C., & Knight, R. (2011) · Bioinformatics · doi:10.1093/bioinformatics/btr381 · Cited by 15,114 · see citing works
Clegg, A., Young, J., Iliffe, S., Rikkert, M. O., & Rockwood, K. (2013) · The Lancet · doi:10.1016/s0140-6736(12)62167-9 · Cited by 9,503 · see citing works
Changes of Intestinal Functions in Liver Cirrhosis
Fukui, H., & Wiest, R. (2016) · Inflammatory Intestinal Diseases · doi:10.1159/000444436 · Cited by 6,820 · see citing works
A metagenome-wide association study of gut microbiota in type 2 diabetes
Qin, J., Li, Y., Cai, Z., Li, S., Zhu, J., Zhang, F., Liang, S., Zhang, W., Guan, Y., Shen, D., et al. (2012) · Nature · doi:10.1038/nature11450 · Cited by 6,762 · see citing works
Inflamm‐aging: An Evolutionary Perspective on Immunosenescence
FRANCESCHI, C., BONAFÈ, M., VALENSIN, S., OLIVIERI, F., DE LUCA, M., OTTAVIANI, E., & DE BENEDICTIS, G. (2000) · Annals of the New York Academy of Sciences · doi:10.1111/j.1749-6632.2000.tb06651.x · Cited by 5,358 · see citing works
Self-citationGut microbiota composition correlates with diet and health in the elderly
Claesson, M. J., Jeffery, I. B., Conde, S., Power, S. E., O’Connor, E. M., Cusack, S., Harris, H. M. B., Coakley, M., Lakshminarayanan, B., O’Sullivan, O., et al. (2012) · Nature · doi:10.1038/nature11319 · Cited by 3,314 · see citing works
Self-citationAlterations of the human gut microbiome in liver cirrhosis
Qin, N., Yang, F., Li, A., Prifti, E., Chen, Y., Shao, L., Guo, J., Le Chatelier, E., Yao, J., Wu, L., et al. (2014) · Nature · doi:10.1038/nature13568 · Cited by 2,177 · see citing works
Machiels, K., Joossens, M., Sabino, J., De Preter, V., Arijs, I., Eeckhaut, V., Ballet, V., Claes, K., Van Immerseel, F., Verbeke, K., et al. (2014) · Gut · doi:10.1136/gutjnl-2013-304833 · Cited by 1,904 · see citing works
Adherence to Mediterranean diet and health status: meta-analysis
Sofi, F., Cesari, F., Abbate, R., Gensini, G. F., & Casini, A. (2008) · BMJ · doi:10.1136/bmj.a1344 · Cited by 1,717 · see citing works
Improved extraction of PCR-quality community DNA from digesta and fecal samples
Yu, Z., & Morrison, M. D. (2004) · BioTechniques · doi:10.2144/04365st04 · Cited by 1,668 · see citing works
De Filippis, F., Pellegrini, N., Vannini, L., Jeffery, I. B., La Storia, A., Laghi, L., Serrazanetti, D. I., Di Cagno, R., Ferrocino, I., Lazzi, C., et al. (2016) · Gut · doi:10.1136/gutjnl-2015-309957 · Cited by 1,638 · see citing works
Self-citationCausal relationships among the gut microbiome, short-chain fatty acids and metabolic diseases
Sanna, S., van Zuydam, N. R., Mahajan, A., Kurilshikov, A., Vich Vila, A., Võsa, U., Mujagic, Z., Masclee, A. A. M., Jonkers, D. M. A. E., Oosting, M., et al. (2019) · Nature Genetics · doi:10.1038/s41588-019-0350-x · Cited by 1,539 · see citing works
Microbial co-occurrence relationships in the human microbiome
Faust, K., Sathirapongsasuti, J. F., Izard, J., Segata, N., Gevers, D., Raes, J., & Huttenhower, C. (2012) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1002606 · Cited by 1,527 · see citing works
Symptomatic atherosclerosis is associated with an altered gut metagenome
Karlsson, F. H., Fåk, F., Nookaew, I., Tremaroli, V., Fagerberg, B., Petranovic, D., Bäckhed, F., & Nielsen, J. (2012) · Nature Communications · doi:10.1038/ncomms2266 · Cited by 1,371 · cited 1× · see citing works
“…scores showed increasing positive correlations with fibre, vitamin C, vitamin D, plant proteins and carbohydrates and increasing negative associations with the components alcohol, fats and sugar whose consumption was decreased during the MedDiet change 35 (see online supplementary figure 12).”
Yu, J. Q., Feng, Q., Wong, S. H., Zhang, D., Liang, Q. Y., Qin, Y., Tang, L., Zhao, H., Stenvang, J., Li, Y., et al. (2015) · Gut · doi:10.1136/gutjnl-2015-309800 · Cited by 1,259 · see citing works
O’Toole, P. W., & Jeffery, I. B. (2015) · Science · doi:10.1126/science.aac8469 · Cited by 1,202 · see citing works
Self-citationFat, fibre and cancer risk in African Americans and rural Africans
O’Keefe, S. J. D., Li, J. V., Lahti, L., Ou, J., Carbonero, F., Mohammed, K., Posma, J. M., Kinross, J., Wahl, E., Ruder, E., et al. (2015) · Nature Communications · doi:10.1038/ncomms7342 · Cited by 982 · see citing works
Self-citationStress and stability: applying the Anna Karenina principle to animal microbiomes
Zaneveld, J. R., McMinds, R., & Vega Thurber, R. (2017) · Nature Microbiology · doi:10.1038/nmicrobiol.2017.121 · Cited by 977 · see citing works
Chávez-Talavera, O., Tailleux, A., Lefebvre, P., & Staels, B. (2017) · Gastroenterology · doi:10.1053/j.gastro.2017.01.055 · Cited by 970 · see citing works
The gut microbiome: Relationships with disease and opportunities for therapy
Durack, J., & Lynch, S. V. (2018) · The Journal of Experimental Medicine · doi:10.1084/jem.20180448 · Cited by 955 · see citing works
Towards standards for human fecal sample processing in metagenomic studies
Costea, P. I., Zeller, G., Sunagawa, S., Pelletier, E., Alberti, A., Levenez, F., Tramontano, M., Driessen, M., Hercog, R., Jung, F.-E., et al. (2017) · Nature Biotechnology · doi:10.1038/nbt.3960 · Cited by 893 · see citing works
Self-citationAdiponectin as an anti-inflammatory factor
Ouchi, N., & Walsh, K. X. (2007) · Clinica Chimica Acta · doi:10.1016/j.cca.2007.01.026 · Cited by 883 · see citing works
Therapeutic strategies for the clinical blockade of IL-6/gp130 signaling
Jones, S. A., Scheller, J., & Rose‐John, S. (2011) · Journal of Clinical Investigation · doi:10.1172/jci57158 · Cited by 683 · see citing works
Trichopoulou, A., Martínez‐González, M. Á., Tong, T. Y. N., Forouhi, N. G., Khandelwal, S., Prabhakaran, D., Mozaffarian, D., & de Lorgeril, M. (2014) · BMC Medicine · doi:10.1186/1741-7015-12-112 · Cited by 667 · see citing works
Ou, J., Carbonero, F., Zoetendal, E. G., DeLany, J. P., Wang, M., Newton, K., Gaskins, H. R., & O’Keefe, S. J. (2013) · The American Journal of Clinical Nutrition · doi:10.3945/ajcn.112.056689 · Cited by 646 · see citing works
Self-citationMeslier, V., Laiola, M., Roager, H. M., De Filippis, F., Roume, H., Quinquis, B., Giacco, R., Mennella, I., Ferracane, R., Pons, N., et al. (2020) · Gut · doi:10.1136/gutjnl-2019-320438 · Cited by 583 · see citing works
Frailty and sarcopenia: The potential role of an aged immune system
Wilson, D., Jackson, T., Sapey, E., & Lord, J. M. (2017) · Ageing Research Reviews · doi:10.1016/j.arr.2017.01.006 · Cited by 573 · see citing works
Signatures of early frailty in the gut microbiota
Jackson, M. A., Jeffery, I. B., Beaumont, M., Bell, J. T., Clark, A. G., Ley, R. E., O’Toole, P. W., Spector, T. D., & Steves, C. J. (2016) · Genome Medicine · doi:10.1186/s13073-016-0262-7 · Cited by 436 · see citing works
Self-citationComposition and temporal stability of the gut microbiota in older persons
Jeffery, I. B., Lynch, D. B., & O’Toole, P. W. (2016) · The ISME Journal · doi:10.1038/ismej.2015.88 · Cited by 421 · see citing works
Self-citationGómez-Arango, L. F., Barrett, H. L., Wilkinson, S. A., Callaway, L. K., McIntyre, D. H., Morrison, M., & Nitert, M. D. (2017) · Gut Microbes · doi:10.1080/19490976.2017.1406584 · Cited by 404 · see citing works
Noronha, A., Modamio, J., Jarosz, Y., Guerard, E., Sompairac, N., Preciat, G., Daníelsdóttir, A. D., Krecké, M., Merten, D., Haraldsdóttir, H. S., et al. (2018) · Nucleic Acids Research · doi:10.1093/nar/gky992 · Cited by 383 · see citing works
Mitsou, E. K., Kakali, A., Antonopoulou, S., Mountzouris, K. C., Yannakoulia, M., Panagiotakos, D. B., & Kyriacou, A. (2017) · British Journal of Nutrition · doi:10.1017/s0007114517001593 · Cited by 325 · see citing works
Cevenini, E., Monti, D., & Franceschi, C. (2013) · Current Opinion in Clinical Nutrition and Metabolic Care · doi:10.1097/mco.0b013e32835ada13 · Cited by 317 · see citing works
Self-citationMicrobial modulation of insulin sensitivity
Khan, M. T., Nieuwdorp, M., & Bäckhed, F. (2014) · Cell Metabolism · doi:10.1016/j.cmet.2014.07.006 · Cited by 260 · see citing works
Adherence to Mediterranean Diet Reduces Incident Frailty Risk: Systematic Review and Meta‐Analysis
Kojima, G., Avgerinou, C., Iliffe, S., & Walters, K. R. (2018) · Journal of the American Geriatrics Society · doi:10.1111/jgs.15251 · Cited by 252 · see citing works
Sung, J., Kim, S., Cabatbat, J. J. T., Jang, S., Jin, Y., Jung, G. Y., Chia, N., & Kim, P. (2017) · Nature Communications · doi:10.1038/ncomms15393 · Cited by 249 · see citing works
Bone, E., Tamm, A., & Hill, M. (1976) · The American Journal of Clinical Nutrition · doi:10.1093/ajcn/29.12.1448 · Cited by 234 · see citing works
Adjusting for age improves identification of gut microbiome alterations in multiple diseases
Ghosh, T. S., Das, M., Jeffery, I. B., & O'Toole, P. W. (2020) · eLife · doi:10.7554/elife.50240 · Cited by 233 · see citing works
Self-citationGhoshal, U. C., Shukla, R., & Ghoshal, U. (2017) · Gut and Liver · doi:10.5009/gnl16126 · Cited by 210 · see citing works
Age-dependent changes in GI physiology and microbiota: time to reconsider?
An, R., Wilms, E., Masclee, A. A. M., Smidt, H., Zoetendal, E. G., & Jonkers, D. (2018) · Gut · doi:10.1136/gutjnl-2017-315542 · Cited by 209 · see citing works
Self-citationJennings, A., Berendsen, A. M., de Groot, L. C. P. G. M., Feskens, E. J. M., Brzozowska, A., Sicinska, E., Pietruszka, B., Meunier, N., Caumon, E., Malpuech-Brugère, C., et al. (2019) · Hypertension · doi:10.1161/hypertensionaha.118.12259 · Cited by 172 · see citing works
Self-citationPagliai, G., Russo, E., Niccolai, E., Dinu, M., Pilato, V. D., Magrini, A., Bartolucci, G., Baldi, S., Menicatti, M., Giusti, B., et al. (2019) · European Journal of Nutrition · doi:10.1007/s00394-019-02050-0 · Cited by 164 · see citing works
SPINGO: a rapid species-classifier for microbial amplicon sequences
Allard, G., Ryan, F. J., Jeffery, I. B., & Claesson, M. J. (2015) · BMC Bioinformatics · doi:10.1186/s12859-015-0747-1 · Cited by 160 · see citing works
Self-citationElshaghabee, F. M. F., Bockelmann, W., Meske, D., de Vrese, M., Walte, H.-G., Schrezenmeir, J., & Heller, K. J. (2016) · Frontiers in Microbiology · doi:10.3389/fmicb.2016.00047 · Cited by 142 · see citing works
Epidemiological and clinical significance of cognitive frailty: A mini review
Sugimoto, T., Sakurai, T., Ono, R., Kimura, A., Saji, N., Niida, S., Toba, K., Chen, L., & Arai, H. (2018) · Ageing Research Reviews · doi:10.1016/j.arr.2018.03.002 · Cited by 135 · see citing works
Santoro, A., Pini, E., Scurti, M., Palmas, M. G., Berendsen, A. A. M., Brzozowska, A., Pietruszka, B., Szczecińska, A., Cano, N., Meunier, N., et al. (2013) · Mechanisms of Ageing and Development · doi:10.1016/j.mad.2013.12.001 · Cited by 129 · see citing works
Self-citationBile acid dysregulation, gut dysbiosis, and gastrointestinal cancer
Tsuei, J., Chau, T., Mills, D. A., & Wan, Y. Y. (2014) · Experimental Biology and Medicine · doi:10.1177/1535370214538743 · Cited by 118 · see citing works
Effect of the NU-AGE Diet on Cognitive Functioning in Older Adults: A Randomized Controlled Trial
Marseglia, A., Xu, W., Fratiglioni, L., Fabbri, C., Berendsen, A. A. M., Białecka-Dębek, A., Jennings, A., Gillings, R., Meunier, N., Caumon, E., et al. (2018) · Frontiers in Physiology · doi:10.3389/fphys.2018.00349 · Cited by 116 · see citing works
Self-citationTran, T. T. T., Cousin, F., Lynch, D. B., Menon, R., Brulc, J. M., Brown, J. R.-M., O’Herlihy, E. A., Buttó, L. F., Power, K., Jeffery, I. B., et al. (2019) · Microbiome · doi:10.1186/s40168-019-0654-1 · Cited by 109 · see citing works
Self-citationBerendsen, A., Santoro, A., Pini, E., Cevenini, E., Ostan, R., Pietruszka, B., Rolf, K., Cano, N., Caille, A., Lyon-Belgy, N., et al. (2013) · Mechanisms of Ageing and Development · doi:10.1016/j.mad.2013.10.002 · Cited by 82 · see citing works
Self-citationSimplified Intestinal Microbiota to Study Microbe-Diet-Host Interactions in a Mouse Model
Kovatcheva‐Datchary, P., Shoaie, S., Lee, S., Wahlstrom, A. M., Nookaew, I., Hallén, A., Perkins, R., Nielsen, J., & Bäckhed, F. (2019) · Cell Reports · doi:10.1016/j.celrep.2019.02.090 · Cited by 79 · see citing works
Jennings, A., Cashman, K. D., Gillings, R., Cassidy, A., TANG, J. C. Y., Fraser, W., Dowling, K. G., Hull, G. L. J., Berendsen, A. A. M., de Groot, C. P. G. M., et al. (2018) · American Journal of Clinical Nutrition · doi:10.1093/ajcn/nqy122 · Cited by 65 · see citing works
Self-citationBerendsen, A. A. M., van de Rest, O., Feskens, E. J. M., Santoro, A., Ostan, R., Pietruszka, B., Brzozowska, A., Stelmaszczyk-Kusz, A., Jennings, A., Gillings, R., et al. (2018) · Nutrients · doi:10.3390/nu10121905 · Cited by 64 · see citing works
Self-citationiBBiG: iterative binary bi-clustering of gene sets
Gusenleitner, D., Howe, E., Bentink, S., Quackenbush, J. F., & Culhane, A. C. (2012) · Bioinformatics · doi:10.1093/bioinformatics/bts438 · Cited by 60 · see citing works
Formation of methylglyoxal by bacteria isolated from human faeces
Baskaran, S., Rajan, D. P., & Balasubramanian, K. A. (1989) · Journal of Medical Microbiology · doi:10.1099/00222615-28-3-211 · Cited by 50 · see citing works
Santoro, A., Guidarelli, G., Ostan, R., Giampieri, E., Fabbri, C., Bertarelli, C., Nicoletti, C., Kadi, F., de Groot, C. P. G. M., Feskens, E. J. M., et al. (2019) · European Radiology · doi:10.1007/s00330-018-5973-2 · Cited by 47 · see citing works
Self-citationMaijó, M., Ivory, K., Clements, S. J., Dainty, J. R., Jennings, A., Gillings, R., Fairweather‐Tait, S. J., Gulisano, M., Santoro, A., Franceschi, C., et al. (2018) · Frontiers in Physiology · doi:10.3389/fphys.2018.00997 · Cited by 25 · see citing works
Self-citationPagliai, G., Russo, E., Niccolai, E., et al. (2020) · Proceedings of The Nutrition Society · doi:10.1017/s0029665120001251 · Cited by 7 · see citing works
Giampieri, E., Ostan, R., Guidarelli, G., Salvioli, S., Berendsen, A. A. M., Brzozowska, A., Pietruszka, B., Jennings, A., Meunier, N., Caumon, E., et al. (2019) · Frontiers in Physiology · doi:10.3389/fphys.2019.00149 · Cited by 5 · see citing works
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Sorted by citations
Firth, J., Solmi, M., Wootton, R. E., Vancampfort, D., Schuch, F. B., Hoare, E., Gilbody, S., Torous, J., Teasdale, S. B., Jackson, S. E., et al. (2020) · World Psychiatry · doi:10.1002/wps.20773 · Cited by 1,148 · see citing works
The gut microbiome as a modulator of healthy ageing
Ghosh, T. S., Shanahan, F., & O’Toole, P. W. (2022) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/s41575-022-00605-x · Cited by 817 · see citing works
Self-citationPrevotella Diversity, Niches and Interactions with the Human Host
Tett, A., Pasolli, E., Masetti, G., Ercolini, D., & Segata, N. (2021) · Nature Reviews Microbiology · doi:10.1038/s41579-021-00559-y · Cited by 748 · see citing works
Diet and depression: Exploring the biological mechanisms of action
Marx, W., Lane, M., Hockey, M., Aslam, H., Berk, M., Walder, K., Borsini, A., Firth, J., Pariante, C. M., Berding, K., et al. (2021) · Molecular Psychiatry · doi:10.1038/s41380-020-00925-x · Cited by 685 · see citing works
Immunosenescence and inflammaging in the aging process: age-related diseases or longevity?
Santoro, A., Bientinesi, E., & Monti, D. (2021) · Ageing Research Reviews · doi:10.1016/j.arr.2021.101422 · Cited by 603 · see citing works
Self-citationEffect of Diet and Dietary Components on the Composition of the Gut Microbiota
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Food and mood: How do diet and nutrition affect mental wellbeing?
Firth, J., Gangwisch, J. E., Borsini, A., Wootton, R. E., & Mayer, E. A. (2020) · BMJ · doi:10.1136/bmj.m2382 · Cited by 475 · see citing works
Diet and the Microbiota–Gut–Brain Axis: Sowing the Seeds of Good Mental Health
Berding, K., Vlckova, K., Marx, W., Schellekens, H., Stanton, C., Clarke, G., Jacka, F., Dinan, T. G., & Cryan, J. F. (2021) · Advances in Nutrition · doi:10.1093/advances/nmaa181 · Cited by 451 · see citing works
Signalling cognition: The gut microbiota and hypothalamic-pituitary-adrenal axis
Rusch, J. A., Layden, B. T., & Dugas, L. R. (2023) · Frontiers in Endocrinology · doi:10.3389/fendo.2023.1130689 · Cited by 415 · see citing works
Wang, D. D., Nguyen, L. H., Li, Y., Yan, Y., Ma, W., Rinott, E., Ivey, K. L., Shai, I., Willett, W. C., Hu, F. B., et al. (2021) · Nature Medicine · doi:10.1038/s41591-020-01223-3 · Cited by 386 · see citing works
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Vijay, A., & Valdes, A. M. (2022) · European Journal of Clinical Nutrition · doi:10.1038/s41430-021-00991-6 · Cited by 361 · see citing works
RetractedThe Gut Microbiota and Unhealthy Aging: Disentangling Cause from Consequence
DeJong, E. N., Surette, M. G., & Bowdish, D. M. E. (2020) · Cell Host & Microbe · doi:10.1016/j.chom.2020.07.013 · Cited by 370 · see citing works
Wenzel, T. J., Gates, E. J., Ranger, A. L., & Klegeris, A. (2020) · Molecular and Cellular Neuroscience · doi:10.1016/j.mcn.2020.103493 · Cited by 320 · see citing works
From gut microbiota to host appetite: gut microbiota-derived metabolites as key regulators
Han, H., Yi, B., Zhong, R., Wang, M., Zhang, S., Ma, J., Yin, Y., Yin, J., Chen, L., & Zhang, H. (2021) · Microbiome · doi:10.1186/s40168-021-01093-y · Cited by 292 · see citing works
Rethinking healthy eating in light of the gut microbiome
Armet, A. M., Deehan, E. C., O’Sullivan, A. F., Mota, J. F., Field, C. J., Prado, C. M., Lucey, A. J., & Walter, J. (2022) · Cell Host & Microbe · doi:10.1016/j.chom.2022.04.016 · Cited by 252 · see citing works
Billot, M., Calvani, R., Urtamo, A., Sánchez-Sánchez, J. L., Ciccolari-Micaldi, C., Chang, M., Roller-Wirnsberger, R., Wirnsberger, G., Sinclair, A., Vaquero-Pinto, M. N., et al. (2020) · Clinical Interventions in Aging · doi:10.2147/cia.s253535 · Cited by 242 · see citing works
Adjusting for age improves identification of gut microbiome alterations in multiple diseases
Ghosh, T. S., Das, M., Jeffery, I. B., & O'Toole, P. W. (2020) · eLife · doi:10.7554/elife.50240 · Cited by 233 · see citing works
Self-citationThe Potential Role of Gut Microbiota in Alzheimer’s Disease: From Diagnosis to Treatment
Varesi, A., Pierella, E., Romeo, M., Piccini, G. B., Alfano, C., Bjørklund, G., Oppong, A., Ricevuti, G., Esposito, C., Chirumbolo, S., et al. (2022) · Nutrients · doi:10.3390/nu14030668 · Cited by 225 · see citing works
Role of diet and its effects on the gut microbiome in the pathophysiology of mental disorders
Horn, J., Mayer, D. E., Chen, S., & Mayer, E. A. (2022) · Translational Psychiatry · doi:10.1038/s41398-022-01922-0 · Cited by 193 · see citing works
Seethaler, B., Nguyen, N. K., Basrai, M., Kiechle, M., Walter, J., Delzenne, N. M., & Bischoff, S. C. (2022) · The American Journal of Clinical Nutrition · doi:10.1093/ajcn/nqac175 · Cited by 179 · see citing works
Berding, K., Bastiaanssen, T. F. S., Moloney, G. M., Boscaini, S., Strain, C. R., Anesi, A., Long-Smith, C., Mattivi, F., Stanton, C., Clarke, G., et al. (2023) · Molecular Psychiatry · doi:10.1038/s41380-022-01817-y · Cited by 153 · see citing works
Spichak, S., Bastiaanssen, T. F. S., Berding, K., Vlckova, K., Clarke, G., Dinan, T. G., & Cryan, J. F. (2021) · Neuroscience & Biobehavioral Reviews · doi:10.1016/j.neubiorev.2021.02.044 · Cited by 127 · see citing works
van Soest, A. P. M., Hermes, G. D. A., Berendsen, A. A. M., van de Rest, O., Zoetendal, E. G., Fuentes, S., Santoro, A., Franceschi, C., de Groot, L. C. P. G. M., & de Vos, W. M. (2020) · Nutrients · doi:10.3390/nu12113471 · Cited by 118 · see citing works
Self-citationCardiometabolic health, diet and the gut microbiome: a meta-omics perspective
Valles-Colomer, M., Menni, C., Berry, S. E., Valdes, A. M., Spector, T. D., & Segata, N. (2023) · Nature Medicine · doi:10.1038/s41591-023-02260-4 · Cited by 114 · see citing works
Going with the grain: Fiber, cognition, and the microbiota-gut-brain-axis
Berding, K., Carbia, C., & Cryan, J. F. (2021) · Experimental Biology and Medicine · doi:10.1177/1535370221995785 · Cited by 100 · see citing works
Altered Skin and Gut Microbiome in Hidradenitis Suppurativa
McCarthy, S., Barrett, M., Kirthi, S., Pellanda, P., Vlckova, K., Tobin, A.-M., Murphy, M., Shanahan, F., & O’Toole, P. W. (2022) · Journal of Investigative Dermatology · doi:10.1016/j.jid.2021.05.036 · Cited by 98 · see citing works
Koopen, A. M., Almeida, E. L., Attaye, I., Witjes, J. J., Rampanelli, E., Majait, S., Kemper, M., Levels, J. H. M., Schimmel, A. W. M., Herrema, H., et al. (2021) · Frontiers in Microbiology · doi:10.3389/fmicb.2021.662159 · Cited by 64 · see citing works
Self-citationRusch, C., Beke, M., Tucciarone, L., Nieves, C., Ukhanova, M., Tagliamonte, M. S., Mai, V., Suh, J. H., Wang, Y., Chiu, S., et al. (2021) · Frontiers in Neurology · doi:10.3389/fneur.2021.794640 · Cited by 63 · see citing works
Dietary Regulation of Gut-Brain Axis in Alzheimer’s Disease: Importance of Microbiota Metabolites
Frausto, D. M., Forsyth, C. B., Keshavarzian, A., & Voigt, R. M. (2021) · Frontiers in Neuroscience · doi:10.3389/fnins.2021.736814 · Cited by 61 · see citing works
Gut Microbiota and Type 1 Diabetes Mellitus: The Effect of Mediterranean Diet
Calabrese, C. M., Valentini, A., & Calabrese, G. (2021) · Frontiers in Nutrition · doi:10.3389/fnut.2020.612773 · Cited by 58 · see citing works
Mańkowska-Wierzbicka, D., Stelmach-Mardas, M., Gabryel, M., Tomczak, H., Skrzypczak-Zielińska, M., Zakerska-Banaszak, O., Sowińska, A., Mahadea, D., Baturo, A., Wolko, Ł., et al. (2020) · Biomedicines · doi:10.3390/biomedicines8080268 · Cited by 39 · see citing works
Toward a health-associated core keystone index for the human gut microbiome
Goel, A., Shete, O., Goswami, S., Samal, A., C.B., L., Kedia, S., Ahuja, V., O’Toole, P. W., Shanahan, F., & Ghosh, T. S. (2025) · Cell Reports · doi:10.1016/j.celrep.2025.115378 · Cited by 37 · see citing works
Self-citationVidyanti, A. N., Rahmawati, F., Rahman, R. H., Prodjohardjono, A., & Gofir, A. (2025) · The Journal of Prevention of Alzheimer's Disease · doi:10.1016/j.tjpad.2024.100028 · Cited by 19 · see citing works
Dai, L., Schurgers, L., Shiels, P. G., & Stenvinkel, P. (2021) · Clinical Science · doi:10.1042/cs20201452 · Cited by 11 · see citing works
Skrabic, R., Kumric, M., Santic, R., Skrabic, I., Pavlovic, N., Rusic, D., & Bozic, J. (2026) · Frontiers in Nutrition · doi:10.3389/fnut.2026.1875074
- Authors
- Ghosh, T. S., Rampelli, S., Jeffery, I. B., Santoro, A., Neto, M., Capri, M., Giampieri, E., Jennings, A., Candela, M., Turroni, S., Zoetendal, E. G., Hermes, G. D. A., Elodie, C., Meunier, N., Brugere, C. M., Pujos-Guillot, E., Berendsen, A. M., De Groot, L. C. P. G. M., Feskins, E. J. M., Kaluza, J., Pietruszka, B., Bielak, M. J., Comte, B., Maijo-Ferre, M., Nicoletti, C., De Vos, W. M., Fairweather-Tait, S., Cassidy, A., Brigidi, P., Franceschi, C., & O'Toole, P. W.
- Affiliations
- University College Cork (IE)
- University of Bologna (IT)
- University of East Anglia (GB)
- Wageningen University & Research (NL)
- Centre de Recherche en Nutrition Humaine d'Auvergne (FR)
- Warsaw University of Life Sciences (PL)
- Université Clermont Auvergne (FR)
- Quadram Institute (GB)
- N. I. Lobachevsky State University of Nizhny Novgorod (RU)
- ORCID
- Ghosh, Tarini Shankar
- Rampelli, Simone
- Jeffery, Ian B
- Santoro, Aurelia
- Neto, Marta
- Capri, Miriam
- Giampieri, Enrico
- Jennings, Amy
- Candela, Marco
- Turroni, Silvia
- Zoetendal, Erwin G
- Hermes, Gerben D A
- Meunier, Nathalie
- Kaluza, Joanna
- Pietruszka, Barbara
- Comte, Blandine
- Nicoletti, Claudio
- Brigidi, Patrizia
- Franceschi, Claudio
- O'Toole, Paul W
- Venue
- Gut
- Publisher
- BMJ
- Published
- 2020-02-17
- Volume
- 69
- Issue
- 7
- Pages
- 1218-1228
- ISSN
- 0017-5749 (ISSN-L)
- 1468-3288
- PMC
- PMC7306987
- OpenAlex
- W3002445804
- Cited by
- 991
- References
- 63
- Citations by year
- 2026: 148 · 2025: 185 · 2024: 196 · 2023: 152 · 2022: 112 · 2021: 123 · 2020: 72
- FWCI
- 37.23
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Gut (publishedVersion, cc-by-nc)
- PubMed Central (publishedVersion, cc-by-nc)
- PubMed (publishedVersion)
- UEA Digital Repository (University of East Anglia) (acceptedVersion)
- Socio-Environmental Systems Modeling (acceptedVersion, cc-by-nc)
- HAL (submittedVersion, cc-by)
- Florence Research (University of Florence) (submittedVersion, other-oa)
- Research Portal (Queen's University Belfast) (submittedVersion, cc-by-nc)
- Lenus, The Irish Health Repository (Dr Steevens Hospital Library) (submittedVersion, cc-by-nc)
- Institutional Research Information System (University of Udine) (submittedVersion, cc-by-nc-nd)
- Institutional Research Information System (University of Udine) (submittedVersion)
- Archivio istituzionale della ricerca (Alma Mater Studiorum Università di Bologna) (submittedVersion, cc-by-nc)
- Työväentutkimus Vuosikirja (submittedVersion)
- HighWire Press Open Archive (submittedVersion)
- Use Siena air (University of Siena) (submittedVersion, cc-by-nc)
- Data Archiving and Networked Services (DANS) (submittedVersion, cc-by-nc)
- Funders
- Science Foundation Ireland (13/SIRG/2128, APC/SFI/12/RC/2273)
- Seventh Framework Programme (266486 (‘NU-AGE: New dietary strategies addressi)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Health Sciences › Medicine › Public Health, Environmental and Occupational Health › Nutritional Studies and Diet
- Health Sciences › Medicine › Geriatrics and Gerontology › Frailty in Older Adults
- Keywords
- Mediterranean diet, gut microbiota, frailty, older adults, dietary intervention, cognitive function, inflammation, C-reactive protein, IL-17, short-chain fatty acids, secondary bile acids, microbial metabolites, keystone species, healthy aging
- MeSH terms
- Gastrointestinal Microbiome, Frailty, Aged, Europe, Female, Health Status, Humans, Male, Patient Compliance, RNA, Ribosomal, 16S, Single-Blind Method, Diet, Mediterranean
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