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The DOI matches its Crossref record; 16 of the 16 references it cites were found in a registry or an index.

DNA interrogation by the CRISPR RNA-guided endonuclease Cas9

Sternberg, Samuel H., Redding, Sy, Jinek, Martin, Greene, Eric C., Doudna, Jennifer A.·2014·Nature
DOI 10.1038/nature13011PMC PMC4106473
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Crossref · 10.1038/nature13011

Cites

16 of 16 references verified0 citation errors · 0 not checkable

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  • SpCas9 can recognize a 5′-NGG protospacer adjacent motif (PAM), which is part of the non-self-sequence recognized by the CRISPR bacterial adaptive immune system.

    “SpCas9 can recognize a 5′-NGG protospacer adjacent motif (PAM), which is part of the non-self-sequence recognized by the CRISPR bacterial adaptive immune system.”

    From Viral Delivery Systems for CRISPR (2019) · cites this paper as [66]

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Citations

Cites

Flagged first, then by citations

Research works printed but not linked: 32

  1. Barrangou, R. et al. CRISPR provides acquired resistance against viruses in prokaryotes. Science 315, 1709–1712 (2007) · DOI · Paper page
  2. Brouns, S. J. J. et al. Small CRISPR RNAs guide antiviral defense in prokaryotes. Science 321, 960–964 (2008) · DOI · Paper page
  3. Garneau, J. E. et al. The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA. Nature 468, 67–71 (2010) · DOI
  4. Gasiunas, G., Barrangou, R., Horvath, P. & Siksnys, V. Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria. Proc. Natl Acad. Sci. USA 109, E2579–E2586 (2012) · DOI · Paper page
  5. Bassett, A. R., Tibbit, C., Ponting, C. P. & Liu, J.-L. Highly efficient targeted mutagenesis of Drosophila with the CRISPR/Cas9 System. Cell Rep. 4, 220–228 (2013) · DOI
  6. Gratz, S. J. et al. Genome engineering of Drosophila with the CRISPR RNA-guided Cas9 nuclease. Genetics 194, 1029–1035 (2013) · DOI
  7. Shan, Q. et al. Targeted genome modification of crop plants using a CRISPR-Cas system. Nature Biotechnol. 31, 686–688 (2013) · DOI · Paper page
  8. Li, J.-F. et al. Multiplex and homologous recombination-mediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9. Nature Biotechnol. 31, 688–691 (2013) · DOI
  9. Nekrasov, V., Staskawicz, B., Weigel, D., Jones, J. D. G. & Kamoun, S. Targeted mutagenesis in the model plant Nicotiana benthamiana using Cas9 RNA-guided endonuclease. Nature Biotechnol. 31, 691–693 (2013) · DOI
  10. Xie, K. & Yang, Y. RNA-guided genome editing in plants using A CRISPR-Cas system. Mol. Plant 6, 1975–1983 (2013) · DOI
  11. Bikard, D. et al. Programmable repression and activation of bacterial gene expression using an engineered CRISPR-Cas system. Nucleic Acids Res. 41, 7429–7437 (2013) · DOI · Paper page
  12. Maeder, M. L. et al. CRISPR RNA-guided activation of endogenous human genes. Nature Methods 10, 977–979 (2013) · DOI · Paper page
  13. Perez-Pinera, P. et al. RNA-guided gene activation by CRISPR-Cas9-based transcription factors. Nature Methods 10, 973–976 (2013) · DOI · Paper page
  14. Fazio, T., Visnapuu, M.-L., Wind, S. & Greene, E. C. DNA curtains and nanoscale curtain rods: high-throughput tools for single molecule imaging. Langmuir 24, 10524–10531 (2008) · DOI
  15. Visnapuu, M.-L. & Greene, E. C. Single-molecule imaging of DNA curtains reveals intrinsic energy landscapes for nucleosome deposition. Nature Struct. Mol. Biol. 16, 1056–1062 (2009) · DOI
  16. Finkelstein, I. J., Visnapuu, M.-L. & Greene, E. C. Single-molecule imaging reveals mechanisms of protein disruption by a DNA translocase. Nature 468, 983–987 (2010) · DOI
  17. Gorman, J., Fazio, T., Wang, F., Wind, S. & Greene, E. C. Nanofabricated racks of aligned and anchored DNA substrates for single-molecule imaging. Langmuir 26, 1372–1379 (2010) · DOI
  18. Gorman, J., Plys, A. J., Visnapuu, M.-L., Alani, E. & Greene, E. C. Visualizing one-dimensional diffusion of eukaryotic DNA repair factors along a chromatin lattice. Nature Struct. Mol. Biol. 17, 932–938 (2010) · DOI
  19. Wang, F. et al. The promoter-search mechanism of Escherichia coli RNA polymerase is dominated by three-dimensional diffusion. Nature Struct. Mol. Biol. 20, 174–181 (2013) · DOI
  20. von Hippel, P. H. & Berg, O. G. Facilitated target location in biological systems. J. Biol. Chem. 264, 675–678 (1989) · DOI
  21. Gorman, J. et al. Single-molecule imaging reveals target-search mechanisms during DNA mismatch repair. Proc. Natl Acad. Sci. USA 109, E3074–E3083 (2012) · DOI
  22. von Hippel, P. H. & Berg, O. G. On the specificity of DNA-protein interactions. Proc. Natl Acad. Sci. USA 83, 1608–1612 (1986) · DOI
  23. Rohs, R. et al. Origins of specificity in protein-DNA recognition. Annu. Rev. Biochem. 79, 233–269 (2010) · DOI
  24. Abbondanzieri, E. A., Greenleaf, W. J., Shaevitz, J. W., Landick, R. & Block, S. M. Direct observation of base-pair stepping by RNA polymerase. Nature 438, 460–465 (2005) · DOI
  25. Mojica, F. J. M., Díez-Villaseñor, C., García-Martínez, J. & Almendros, C. Short motif sequences determine the targets of the prokaryotic CRISPR defence system. Microbiology 155, 733–740 (2009) · DOI · Paper page
  26. Marraffini, L. A. & Sontheimer, E. J. Self versus non-self discrimination during CRISPR RNA-directed immunity. Nature 463, 568–571 (2010) · DOI
  27. Semenova, E. et al. Interference by clustered regularly interspaced short palindromic repeat (CRISPR) RNA is governed by a seed sequence. Proc. Natl Acad. Sci. USA 108, 10098–10103 (2011) · DOI · Paper page
  28. Wiedenheft, B. et al. RNA-guided complex from a bacterial immune system enhances target recognition through seed sequence interactions. Proc. Natl Acad. Sci. USA 108, 10092–10097 (2011) · DOI
  29. Sashital, D. G., Wiedenheft, B. & Doudna, J. A. Mechanism of foreign DNA selection in a bacterial adaptive immune system. Mol. Cell 46, 606–615 (2012) · DOI
  30. Hou, Z. et al. Efficient genome engineering in human pluripotent stem cells using Cas9 from Neisseria meningitidis. Proc. Natl Acad. Sci. USA 110, 15644–15649 (2013) · DOI · Paper page
  31. Esvelt, K. M. et al. Orthogonal Cas9 proteins for RNA-guided gene regulation and editing. Nature Methods 10, 1116–1121 (2013) · DOI · Paper page
  32. Sternberg, S. H., Haurwitz, R. E. & Doudna, J. A. Mechanism of substrate selection by a highly specific CRISPR endoribonuclease. RNA 18, 661–672 (2012) · DOI

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Metadata

Authors
Sternberg, S. H., Redding, S., Jinek, M., Greene, E. C., & Doudna, J. A.
Venue
Nature
Publisher
Springer Science and Business Media LLC
Published
2014-01-29
Volume
507
Issue
7490
Pages
62-67
ISSN
  • 0028-0836
  • 1476-4687
DOI
10.1038/nature13011
PMC
PMC4106473
Cited by
1,822
References
16
Language
en
Licence
www.springer.com/tdm (tdm)

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