Computer Visualization of Three-Dimensional Image Data Using IMOD

ER Tubules Mark Sites of Mitochondrial Division

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Molecular Architecture of the SARS-CoV-2 Virus

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M. tuberculosis and M. leprae Translocate from the Phagolysosome to the Cytosol in Myeloid Cells

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Engineered ascorbate peroxidase as a genetically encoded reporter for electron microscopy

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Reward-related cortical inputs define a large striatal region in primates that interface with associative cortical connections, providing a substrate for incentive-based learning.

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Microglia monitor and protect neuronal function through specialized somatic purinergic junctions

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Transcellular degradation of axonal mitochondria

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Isolation of an archaeon at the prokaryote–eukaryote interface

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Ultrafast endocytosis at mouse hippocampal synapses

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Multiple dynamin family members collaborate to drive mitochondrial division

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A gut-derived metabolite alters brain activity and anxiety behaviour in mice

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Mammalian lipid droplets are innate immune hubs integrating cell metabolism and host defense

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A unifying structural and functional model of the coronavirus replication organelle: Tracking down RNA synthesis

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Structure of the yeast F 1 F o -ATP synthase dimer and its role in shaping the mitochondrial cristae

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Enhanced FIB-SEM systems for large-volume 3D imaging

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Mitochondrial reticulum for cellular energy distribution in muscle

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Electron tomography analysis of envelope glycoprotein trimers on HIV and simian immunodeficiency virus virions

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Parkin‐independent mitophagy requires Drp1 and maintains the integrity of mammalian heart and brain

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Piecemeal Microautophagy of Nucleus in Saccharomyces cerevisiae

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ER sliding dynamics and ER-mitochondrial contacts occur on acetylated microtubules

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The Morphological and Molecular Nature of Synaptic Vesicle Priming at Presynaptic Active Zones

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An Integrated Micro- and Macroarchitectural Analysis of the Drosophila Brain by Computer-Assisted Serial Section Electron Microscopy

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ER-Associated Mitochondrial Division Links the Distribution of Mitochondria and Mitochondrial DNA in Yeast

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Electron cryotomography of immature HIV‐1 virions reveals the structure of the CA and SP1 Gag shells

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Immunosurveillance of the Liver by Intravascular Effector CD8 + T Cells

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PSD-95 family MAGUKs are essential for anchoring AMPA and NMDA receptor complexes at the postsynaptic density

Chen, X., Levy, J. M., Hou, A., Winters, C., Azzam, R., Sousa, A. A., Leapman, R. D., Nicoll, R. A., & Reese, T. S. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1517045112 · Cited by 310

Structure deformation and curvature sensing of PIEZO1 in lipid membranes

Yang, X., Lin, C., Chen, X., Li, S., Li, X., & Xiao, B. (2022) · Nature · doi:10.1038/s41586-022-04574-8 · Cited by 305

Identification of an atypical monocyte and committed progenitor involved in fibrosis

Satoh, T., Nakagawa, K., Sugihara, F., Kuwahara, R., Ashihara, M., Yamane, F., Minowa, Y., Fukushima, K., Ebina, I., Yoshioka, Y., et al. (2017) · Nature · doi:10.1038/nature20611 · Cited by 302

Structure of the immature HIV-1 capsid in intact virus particles at 8.8 Å resolution

Schur, F. K. M., Hagen, W. J. H., Rumlová, M., Ruml, T., Müller, B., Kräusslich, H.-G., & Briggs, J. A. G. (2015) · Nature · doi:10.1038/nature13838 · Cited by 296

In-cell architecture of an actively transcribing-translating expressome

O’Reilly, F. J., Xue, L., Graziadei, A., Sinn, L., Lenz, S., Tegunov, D., Blötz, C., Singh, N., Hagen, W. J. H., Cramer, P., et al. (2020) · Science · doi:10.1126/science.abb3758 · Cited by 284

Marine Tubeworm Metamorphosis Induced by Arrays of Bacterial Phage Tail–Like Structures

Shikuma, N. J., Pilhofer, M., Weiss, G. L., Hadfield, M. G., Jensen, G. J., & Newman, D. K. (2014) · Science · doi:10.1126/science.1246794 · Cited by 267

Expression and Cleavage of Middle East Respiratory Syndrome Coronavirus nsp3-4 Polyprotein Induce the Formation of Double-Membrane Vesicles That Mimic Those Associated with Coronaviral RNA Replication

Oudshoorn, D., Rijs, K., Limpens, R. W. A. L., Groen, K., Koster, A. J., Snijder, E. J., Kikkert, M., & Bárcena, M. (2017) · mBio · doi:10.1128/mbio.01658-17 · Cited by 245

Close membrane-membrane proximity induced by Ca2+-dependent multivalent binding of synaptotagmin-1 to phospholipids

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Structure of the membrane-assembled retromer coat determined by cryo-electron tomography

Kovtun, O., Leneva, N., Bykov, Y. S., Ariotti, N., Teasdale, R. D., Schaffer, M., Engel, B. D., Owen, D. J., Briggs, J. A. G., & Collins, B. M. (2018) · Nature · doi:10.1038/s41586-018-0526-z · Cited by 247

Corneal collagen fibril structure in three dimensions: Structural insights into fibril assembly, mechanical properties, and tissue organization

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FtsA forms actin‐like protofilaments

Szwedziak, P., Wang, Q., Freund, S. M., & Löwe, J. (2012) · The EMBO Journal · doi:10.1038/emboj.2012.76 · Cited by 233

Three-Dimensional Analysis of Budding Sites and Released Virus Suggests a Revised Model for HIV-1 Morphogenesis

Carlson, L.-A., Briggs, J. A. G., Glass, B., Riches, J. D., Simon, M. N., Johnson, M. C., Müller, B., Grünewald, K., & Kräusslich, H.-G. (2008) · Cell Host & Microbe · doi:10.1016/j.chom.2008.10.013 · Cited by 230

The Mechanism of HIV-1 Core Assembly: Insights from Three-Dimensional Reconstructions of Authentic Virions

Briggs, J. A. G., Grünewald, K., Glass, B., Förster, F., Kräusslich, H.-G., & Fuller, S. D. (2006) · Structure · doi:10.1016/j.str.2005.09.010 · Cited by 230

Molecular Basis for Age-Dependent Microtubule Acetylation by Tubulin Acetyltransferase

Szyk, A., Deaconescu, A. M., Spector, J., Goodman, B., Valenstein, M. L., Ziolkowska, N. E., Kormendi, V., Grigorieff, N., & Roll-Mecak, A. (2014) · Cell · doi:10.1016/j.cell.2014.03.061 · Cited by 218

Human and Monkey Ventral Prefrontal Fibers Use the Same Organizational Principles to Reach Their Targets: Tracing versus Tractography

Jbabdi, S., Lehman, J. F., Haber, S. N., & Behrens, T. E. (2013) · The Journal of Neuroscience · doi:10.1523/jneurosci.2457-12.2013 · Cited by 213

The Diabetes Susceptibility Gene Clec16a Regulates Mitophagy

Soleimanpour, S. A., Gupta, A., Bakay, M., Ferrari, A. M., Groff, D. N., Fadista, J., Spruce, L. A., Kushner, J. A., Groop, L., Seeholzer, S. H., et al. (2014) · Cell · doi:10.1016/j.cell.2014.05.016 · Cited by 211

Differentiation and Characterization of Excitatory and Inhibitory Synapses by Cryo-electron Tomography and Correlative Microscopy

Tao, C.-L., Liu, Y.-T., Sun, R., Zhang, B., Qi, L., Shivakoti, S., Tian, C.-L., Zhang, P., Lau, P.-M., Zhou, Z. H., et al. (2018) · The Journal of Neuroscience · doi:10.1523/jneurosci.1548-17.2017 · Cited by 207

A survey of methods for 3D histology reconstruction

Pichat, J., Iglesias, J. E., Yousry, T., Ourselin, S., & Modat, M. (2018) · Medical Image Analysis · doi:10.1016/j.media.2018.02.004 · Cited by 207

The cryo-EM structure of intraflagellar transport trains reveals how dynein is inactivated to ensure unidirectional anterograde movement in cilia

Jordan, M. A., Diener, D. R., Stepanek, L., & Pigino, G. (2018) · Nature Cell Biology · doi:10.1038/s41556-018-0213-1 · Cited by 186

Virological Synapse-Mediated Spread of Human Immunodeficiency Virus Type 1 between T Cells Is Sensitive to Entry Inhibition

Martin, N., Welsch, S., Jolly, C., Briggs, J. A. G., Vaux, D., & Sattentau, Q. J. (2010) · Journal of Virology · doi:10.1128/jvi.02651-09 · Cited by 199

Calcium Overload and Mitochondrial Metabolism

Walkon, L. L., Strubbe-Rivera, J. O., & Bazil, J. N. (2022) · Biomolecules · doi:10.3390/biom12121891 · Cited by 187

BACE2 processes PMEL to form the melanosome amyloid matrix in pigment cells

Rochin, L., Hurbain, I., Serneels, L., Fort, C., Watt, B., Leblanc, P., Marks, M. S., De Strooper, B., Raposo, G., & van Niel, G. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1220748110 · Cited by 186

Comprehensive structure and functional adaptations of the yeast nuclear pore complex

Akey, C. W., Singh, D., Ouch, C., Echeverria, I., Nudelman, I., Varberg, J. M., Yu, Z., Fang, F., Shi, Y., Wang, J., et al. (2022) · Cell · doi:10.1016/j.cell.2021.12.015 · Cited by 180

Estimates of projection overlap and zones of convergence within frontal-striatal circuits

Averbeck, B. B., Lehman, J., Jacobson, M., & Haber, S. N. (2014) · The Journal of Neuroscience · doi:10.1523/jneurosci.5806-12.2014 · Cited by 179

Deconstructing complexity: serial block-face electron microscopic analysis of the hippocampal mossy fiber synapse

Wilke, S. A., Antonios, J. K., Bushong, E. A., Badkoobehi, A., Malek, E., Hwang, M., Terada, M., Ellisman, M. H., & Ghosh, A. (2013) · The Journal of Neuroscience · doi:10.1523/jneurosci.1600-12.2013 · Cited by 179

Translation in astrocyte distal processes sets molecular heterogeneity at the gliovascular interface

Boulay, A. C., Saubaméa, B., Adam, N., Chasseigneaux, S., Mazaré, N., Gilbert, A., Bahin, M., Bastianelli, L., Blugeon, C., Perrin, S., et al. (2017) · Cell Discovery · doi:10.1038/celldisc.2017.5 · Cited by 179

Relationship between the corticostriatal terminals from areas 9 and 46, and those from area 8A, dorsal and rostral premotor cortex and area 24c: an anatomical substrate for cognition to action

Calzavara, R., Mailly, P., & Haber, S. N. (2007) · European Journal of Neuroscience · doi:10.1111/j.1460-9568.2007.05825.x · Cited by 170

Power Grid Protection of the Muscle Mitochondrial Reticulum

Glancy, B., Hartnell, L. M., Combs, C. A., Femnou, A., Sun, J., Murphy, E., Subramaniam, S., & Balaban, R. S. (2017) · Cell Reports · doi:10.1016/j.celrep.2017.03.063 · Cited by 172

Neuronal Autophagy Regulates Presynaptic Neurotransmission by Controlling the Axonal Endoplasmic Reticulum

Kuijpers, M., Kochlamazashvili, G., Stumpf, A., Puchkov, D., Swaminathan, A., Lucht, M. T., Krause, E., Maritzen, T., Schmitz, D., & Haucke, V. (2021) · Neuron · doi:10.1016/j.neuron.2020.10.005 · Cited by 170

Co-transmission of acetylcholine and GABA regulates hippocampal states

Takács, V. T., Cserép, C., Schlingloff, D., Pósfai, B., Szőnyi, A., Sos, K. E., Környei, Z., Dénes, Á., Gulyás, A. I., Freund, T. F., et al. (2018) · Nature Communications · doi:10.1038/s41467-018-05136-1 · Cited by 169

Trans-mitochondrial coordination of cristae at regulated membrane junctions

Picard, M., McManus, M. J., Csordás, G., Várnai, P., Dorn II, G. W., Williams, D., Hajnóczky, G., & Wallace, D. C. (2015) · Nature Communications · doi:10.1038/ncomms7259 · Cited by 166

Ion-abrasion scanning electron microscopy reveals surface-connected tubular conduits in HIV-infected macrophages

Bennett, A. E., Narayan, K., Shi, D., Hartnell, L. M., Gousset, K., He, H., Lowekamp, B. C., Yoo, T. S., Bliss, D., Freed, E. O., et al. (2009) · PLoS Pathogens · doi:10.1371/journal.ppat.1000591 · Cited by 163

The Rat Prefrontostriatal System Analyzed in 3D: Evidence for Multiple Interacting Functional Units

Mailly, P., Aliane, V., Groenewegen, H. J., Haber, S. N., & Deniau, J.-M. (2013) · The Journal of Neuroscience · doi:10.1523/jneurosci.5248-12.2013 · Cited by 159

A common molecular basis for membrane docking and functional priming of synaptic vesicles

Siksou, L., Varoqueaux, F., Pascual, O., Triller, A., Brose, N., & Marty, S. (2009) · European Journal of Neuroscience · doi:10.1111/j.1460-9568.2009.06811.x · Cited by 160

Ultrastructural relationship of the phagophore with surrounding organelles

Biazik, J., Ylä-Anttila, P., Vihinen, H., Jokitalo, E., & Eskelinen, E.-L. (2015) · Autophagy · doi:10.1080/15548627.2015.1017178 · Cited by 149

Principles of self-organization and load adaptation by the actin cytoskeleton during clathrin-mediated endocytosis

Akamatsu, M., Vasan, R., Serwas, D., Ferrin, M. A., Rangamani, P., & Drubin, D. G. (2020) · eLife · doi:10.7554/elife.49840 · Cited by 148

Inner lumen proteins stabilize doublet microtubules in cilia and flagella

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Structural interactions between collagen and proteoglycans are elucidated by three-dimensional electron tomography of bovine cornea

Lewis, P. N., Pinali, C., Young, R. D., Meek, K. M., Quantock, A. J., & Knupp, C. (2010) · Structure · doi:10.1016/j.str.2009.11.013 · Cited by 139

In situ architecture of the ER–mitochondria encounter structure

Wozny, M. R., Di Luca, A., Morado, D. R., Picco, A., Khaddaj, R., Campomanes, P., Ivanović, L., Hoffmann, P. C., Miller, E. A., Vanni, S., et al. (2023) · Nature · doi:10.1038/s41586-023-06050-3 · Cited by 134

Cryo Electron Tomography of Native HIV-1 Budding Sites

Carlson, L.-A., de Marco, A., Oberwinkler, H., Habermann, A., Briggs, J. A. G., Kräusslich, H.-G., & Grünewald, K. (2010) · PLoS Pathogens · doi:10.1371/journal.ppat.1001173 · Cited by 133

Imaging endosomes and autophagosomes in whole mammalian cells using correlative cryo-fluorescence and cryo-soft X-ray microscopy (cryo-CLXM)

Duke, E. M. H., Razi, M., Weston, A., Guttmann, P., Werner, S., Henzler, K., Schneider, G., Tooze, S. A., & Collinson, L. M. (2014) · Ultramicroscopy · doi:10.1016/j.ultramic.2013.10.006 · Cited by 128

Nuclear and cytoplasmic huntingtin inclusions exhibit distinct biochemical composition, interactome and ultrastructural properties

Riguet, N., Mahul-Mellier, A.-L., Maharjan, N., Burtscher, J., Croisier, M., Knott, G., Hastings, J., Patin, A., Reiterer, V., Farhan, H., et al. (2021) · Nature Communications · doi:10.1038/s41467-021-26684-z · Cited by 118

Kinesin-binding-triggered conformation switching of microtubules contributes to polarized transport

Shima, T., Morikawa, M., Kaneshiro, J., Kambara, T., Kamimura, S., Yagi, T., Iwamoto, H., Uemura, S., Shigematsu, H., Shirouzu, M., et al. (2018) · Journal of Cell Biology · doi:10.1083/jcb.201711178 · Cited by 125

Amyloid-β nanotubes are associated with prion protein-dependent synaptotoxicity

Nicoll, A. J., Panico, S., Freir, D. B., Wright, D., Terry, C., Risse, E., Herron, C. E., O’Malley, T., Wadsworth, J. D. F., Farrow, M. A., et al. (2013) · Nature Communications · doi:10.1038/ncomms3416 · Cited by 119

The molecular structure of IFT-A and IFT-B in anterograde intraflagellar transport trains

Lacey, S. E., Foster, H. E., & Pigino, G. (2023) · Nature Structural & Molecular Biology · doi:10.1038/s41594-022-00905-5 · Cited by 119

Protein Analysis of Purified Respiratory Syncytial Virus Particles Reveals an Important Role for Heat Shock Protein 90 in Virus Particle Assembly

Radhakrishnan, A., Yeo, D., Brown, G., Myaing, M. Z., Iyer, L. R., Fleck, R., Tan, B.-H., Aitken, J., Sanmun, D., Tang, K., et al. (2010) · Molecular & Cellular Proteomics · doi:10.1074/mcp.m110.001651 · Cited by 114

Structural Analysis of HIV-1 Maturation Using Cryo-Electron Tomography

de Marco, A., Müller, B., Glass, B., Riches, J. D., Kräusslich, H.-G., & Briggs, J. A. G. (2010) · PLoS Pathogens · doi:10.1371/journal.ppat.1001215 · Cited by 114

White matter integrity in mice requires continuous myelin synthesis at the inner tongue

Meschkat, M., Steyer, A. M., Weil, M.-T., Kusch, K., Jahn, O., Piepkorn, L., Agüi-Gonzalez, P., Phan, N. T. N., Ruhwedel, T., Sadowski, B., et al. (2022) · Nature Communications · doi:10.1038/s41467-022-28720-y · Cited by 112

Human pyramidal to interneuron synapses are mediated by multi-vesicular release and multiple docked vesicles

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Scalar nanostructure of the Candida albicans cell wall; a molecular, cellular and ultrastructural analysis and interpretation

Lenardon, M. D., Sood, P., Dorfmueller, H. C., Brown, A. J. P., & Gow, N. A. R. (2020) · The Cell Surface · doi:10.1016/j.tcsw.2020.100047 · Cited by 110

Three-dimensional ultrastructure of the septin filament network in Saccharomyces cerevisiae

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Peptidoglycan Remodeling and Conversion of an Inner Membrane into an Outer Membrane during Sporulation

Tocheva, E. I., Matson, E. G., Morris, D. M., Moussavi, F., Leadbetter, J. R., & Jensen, G. J. (2011) · Cell · doi:10.1016/j.cell.2011.07.029 · Cited by 103

Cell wall synthesis and remodelling dynamics determine division site architecture and cell shape in Escherichia coli

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Convergence of prefrontal and parietal anatomical projections in a connectional hub in the striatum

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Membrane-anchored HDCR nanowires drive hydrogen-powered CO2 fixation

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SuRVoS: Super-Region Volume Segmentation workbench

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