Conserved Seed Pairing, Often Flanked by Adenosines, Indicates that Thousands of Human Genes are MicroRNA Targets

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Items 101–181 of 181

1. MicroRNA-339-5p Down-regulates Protein Expression of β-Site Amyloid Precursor Protein-Cleaving Enzyme 1 (BACE1) in Human Primary Brain Cultures and Is Reduced in Brain Tissue Specimens of Alzheimer Disease Subjects
   Long, Justin M., Ray, Balmiki, Lahiri, Debomoy K. · 2014 · Journal of Biological Chemistry
2. Regulation of cell-type-specific transcriptomes by microRNA networks during human brain development
   Nowakowski, Tomasz J., Rani, Neha, Golkaram, Mahdi, Zhou, Hongjun R., Alvarado, Beatriz, Huch, Kylie, West, Jay A., Leyrat, Anne, Pollen, Alex A., Kriegstein, Arnold R. et al. · 2018 · Nature Neuroscience
3. HRas Signal Transduction Promotes Hepatitis C Virus Cell Entry by Triggering Assembly of the Host Tetraspanin Receptor Complex
   Zona, Laetitia, Lupberger, Joachim, Sidahmed-Adrar, Nazha, Thumann, Christine, Harris, Helen J., Barnes, Amy, Florentin, Jonathan, Tawar, Rajiv G., Xiao, Fei, Turek, Marine et al. · 2013 · Cell Host & Microbe
4. miR-106b impairs cholesterol efflux and increases Aβ levels by repressing ABCA1 expression
   Kim, Jaekwang, Yoon, Hyejin, Ramírez, Cristina M., Lee, Sang-Mi, Hoe, Hyang-Sook, Fernández-Hernando, Carlos, Kim, Jungsu · 2012 · Experimental Neurology
5. Epigenetic mechanisms in schizophrenia and other psychotic disorders: a systematic review of empirical human findings
   Smigielski, Lukasz, Jagannath, Vinita, Rössler, Wulf, Walitza, Susanne, Grünblatt, Edna · 2020 · Molecular Psychiatry
6. MicroRNA-31 Promotes Skin Wound Healing by Enhancing Keratinocyte Proliferation and Migration
   Li, Dongqing, Li, X.I., Wang, Aoxue, Meisgen, Florian, Pivarcsi, Andor, Sonkoly, Enikö, Ståhle, Mona, Landén, Ning Xu · 2015 · Journal of Investigative Dermatology
7. Reduced Expression of Brain-Enriched microRNAs in Glioblastomas Permits Targeted Regulation of a Cell Death Gene
   Skalsky, Rebecca L., Cullen, Bryan R. · 2011 · PLoS ONE
8. MicroRNAs and cardiovascular diseases
   Ono, Koh, Kuwabara, Yasuhide, Han, Jiahuai · 2011 · The FEBS Journal
9. Antisense oligonucleotides: treating neurodegeneration at the level of RNA
   DeVos, Sarah L., Miller, Timothy M. · 2013 · Neurotherapeutics
10. miR-27a and miR-27b regulate autophagic clearance of damaged mitochondria by targeting PTEN-induced putative kinase 1 (PINK1)
    Kim, Jaekwang, Fiesel, Fabienne C., Belmonte, Krystal C., Hudec, Roman, Wang, Wang-Xia, Kim, Chaeyoung, Nelson, Peter T., Springer, Wolfdieter, Kim, Jungsu · 2016 · Molecular Neurodegeneration
11. Differential expression of microRNAs between eutopic and ectopic endometrium in ovarian endometriosis
    Filigheddu, Nicoletta, Gregnanin, Ilaria, Porporato, Paolo E., Surico, Daniela, Perego, Beatrice, Galli, Licia, Patrignani, Claudia, Graziani, Andrea, Surico, Nicola · 2010 · Journal of Biomedicine and Biotechnology
12. Integrated expression profiles of mRNA and miRNA in polarized primary murine microglia
    Freilich, Robert W., Woodbury, Maya E., Ikezu, Tsuneya · 2013 · PLoS ONE
13. Identifying microRNA targets in different gene regions
    Xu, Wenlong, San Lucas, Anthony, Wang, Zixing, Liu, Yin · 2014 · BMC Bioinformatics
14. miR-10b-5p expression in Huntington’s disease brain relates to age of onset and the extent of striatal involvement
    Hoss, Andrew G, Labadorf, Adam, Latourelle, Jeanne C, Kartha, Vinay K, Hadzi, Tiffany C, Gusella, James F, MacDonald, Marcy E, Chen, Jiang-Fan, Akbarian, Schahram, Weng, Zhiping et al. · 2015 · BMC Medical Genomics
15. MicroRNA-183 family members regulate sensorineural fates in the inner ear
    Li, Haiqiong, Kloosterman, Wigard, Fekete, Donna M. · 2010 · The Journal of Neuroscience
16. miR-196a Downregulation Increases the Expression of Type I and III Collagens in Keloid Fibroblasts
    Kashiyama, Kazuya, Mitsutake, Norisato, Matsuse, Michiko, Ogi, Tomoo, Saenko, Vladimir A., Ujifuku, Kenta, Utani, Atsushi, Hirano, Akiyoshi, Yamashita, Shunichi · 2012 · Journal of Investigative Dermatology
17. Genome-wide analysis of transcriptional regulators in human HSPCs reveals a densely interconnected network of coding and noncoding genes
    Beck, Dominik, Thoms, Julie A. I., Perera, Dilmi, Schütte, Judith, Unnikrishnan, Ashwin, Knezevic, Kathy, Kinston, Sarah J., Wilson, Nicola K., O’Brien, Tracey A., Göttgens, Berthold et al. · 2013 · Blood
18. MicroRNA signature and regulatory functions in the endometrium during normal and disease states
    Pan, Qun, Chegini, Nasser · 2008 · Seminars in Reproductive Medicine
19. Induction of Specific MicroRNAs Inhibits Cutaneous Wound Healing
    Pastar, Irena, Khan, Aly Azeem, Stojadinovic, Olivera, Lebrun, Elizabeth A., Medina, Mayrin Correa, Brem, Harold, Kirsner, Robert S., Jimenez, Joaquin J., Leslie, Christina, Tomic-Canic, Marjana · 2012 · Journal of Biological Chemistry
20. APOBEC3A is an oral cancer prognostic biomarker in Taiwanese carriers of an APOBEC deletion polymorphism
    Chen, Ting-Wen, Lee, Chi-Ching, Liu, Hsuan, Wu, Chi-Sheng, Pickering, Curtis R., Huang, Po-Jung, Wang, Jing, Chang, Ian Yi-Feng, Yeh, Yuan-Ming, Chen, Chih-De et al. · 2017 · Nature Communications
21. MicroRNA-23a promotes myelination in the central nervous system
    Lin, Shu-Ting, Huang, Yong, Zhang, Luoying, Heng, Mary Y., Ptáček, Louis J., Fu, Ying-Hui · 2013 · Proceedings of the National Academy of Sciences
22. Transcript and protein expression decoupling reveals RNA binding proteins and miRNAs as potential modulators of human aging
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23. The role of epigenetics in renal ageing
    Shiels, Paul G., McGuinness, Dagmara, Eriksson, Maria, Kooman, Jeroen P., Stenvinkel, Peter · 2017 · Nature Reviews Nephrology
24. The sufficient minimal set of miRNA seed types
    Ellwanger, Daniel C., Büttner, Florian A., Mewes, Hans-Werner, Stümpflen, Volker · 2011 · Bioinformatics
25. Rbfox1 Regulates Synaptic Transmission through the Inhibitory Neuron-Specific vSNARE Vamp1
    Vuong, Celine K., Wei, Weizheng, Lee, Ji-Ann, Lin, Chia-Ho, Damianov, Andrey, de la Torre-Ubieta, Luis, Halabi, Reem, Otis, Klara Olofsdotter, Martin, Kelsey C., O’Dell, Thomas J. et al. · 2018 · Neuron
26. Everything you wanted to know about small RNA but were afraid to ask
    Boyd, Scott D · 2008 · Laboratory Investigation
27. MicroRNA-587 antagonizes 5-FU-induced apoptosis and confers drug resistance by regulating PPP2R1B expression in colorectal cancer
    Zhang, Y, Talmon, G, Wang, J · 2015 · Cell Death & Disease
28. The Challenges and Opportunities in the Development of MicroRNA Therapeutics: A Multidisciplinary Viewpoint
    Momin, Mohammad Yahya, Gaddam, Ravinder Reddy, Kravitz, Madeline, Gupta, Anisha, Vikram, Ajit · 2021 · Cells
29. Profile of Cerebrospinal microRNAs in Fibromyalgia
    Bjersing, Jan L., Lundborg, Christopher, Bokarewa, Maria I., Mannerkorpi, Kaisa · 2013 · PLoS ONE
30. CD47 expression regulated by the miR-133a tumor suppressor is a novel prognostic marker in esophageal squamous cell carcinoma
    SUZUKI, SHIGEMASA, YOKOBORI, TAKEHIKO, TANAKA, NARITAKA, SAKAI, MAKOTO, SANO, AKIHIKO, INOSE, TAKANORI, SOHDA, MAKOTO, NAKAJIMA, MASANOBU, MIYAZAKI, TATSUYA, KATO, HIROYUKI et al. · 2012 · Oncology Reports
31. miR-323a regulates ERBB4 and is involved in depression
    Fiori, Laura M., Kos, Aron, Lin, Rixing, Théroux, Jean-Francois, Lopez, Juan Pablo, Kühne, Claudia, Eggert, Carola, Holzapfel, Maria, Huettl, Rosa-Eva, Mechawar, Naguib et al. · 2021 · Molecular Psychiatry
32. A dual inhibition: microRNA-552 suppresses both transcription and translation of cytochrome P450 2E1
    Miao, Lingling, Yao, Hailan, Li, Chenggang, Pu, Mengfan, Yao, Xuan, Yang, Hui, Qi, Xinming, Ren, Jin, Wang, Yizheng · 2016 · Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms
33. Regulation of miR-146a by RelA/NFkB and p53 in STHdhQ111/HdhQ111 Cells, a Cell Model of Huntington's Disease
    Ghose, Jayeeta, Sinha, Mithun, Das, Eashita, Jana, Nihar R., Bhattacharyya, Nitai P. · 2011 · PLoS ONE
34. Genome-wide Long Non-coding RNA Analysis Identified Circulating LncRNAs as Novel Non-invasive Diagnostic Biomarkers for Gynecological Disease
    Wang, Wen-Tao, Sun, Yu-Meng, Huang, Wei, He, Bo, Zhao, Ya-Nan, Chen, Yue-Qin · 2016 · Scientific Reports
35. Mechanisms of transgenerational inheritance of addictive-like behaviors
    Vassoler, F.M., Sadri-Vakili, G. · 2014 · Neuroscience
36. Brain‐derived neurotrophic factor expression is repressed during myogenic differentiation by miR‐206
    Miura, Pedro, Amirouche, Adel, Clow, Charlene, Bélanger, Guy, Jasmin, Bernard J · 2012 · Journal of Neurochemistry
37. SASP regulation by noncoding RNA
    Panda, Amaresh C., Abdelmohsen, Kotb, Gorospe, Myriam · 2017 · Mechanisms of Ageing and Development
38. 3’UTR Shortening Potentiates MicroRNA-Based Repression of Pro-differentiation Genes in Proliferating Human Cells
    Hoffman, Yonit, Bublik, Debora Rosa, P. Ugalde, Alejandro, Elkon, Ran, Biniashvili, Tammy, Agami, Reuven, Oren, Moshe, Pilpel, Yitzhak · 2016 · PLOS Genetics
39. p53 activates the PANK1/ miRNA-107 gene leading to downregulation of CDK6 and p130 cell cycle proteins
    Böhlig, Levin, Friedrich, Maik, Engeland, Kurt · 2011 · Nucleic Acids Research
40. Progesterone resistance in endometriosis is modulated by the altered expression of microRNA-29c and FKBP4
    Joshi, Niraj R, Miyadahira, Eduardo H, Afshar, Yalda, Jeong, Jae-Wook, Young, Steven L, Lessey, Bruce A, Serafini, Paulo C, Fazleabas, Asgerally T · 2016 · The Journal of Clinical Endocrinology & Metabolism
41. Comparative assessment of differential network analysis methods
    Lichtblau, Yvonne, Zimmermann, Karin, Haldemann, Berit, Lenze, Dido, Hummel, Michael, Leser, Ulf · 2016 · Briefings in Bioinformatics
42. Novel primate miRNAs coevolved with ancient target genes in germinal zone-specific expression patterns
    Arcila, Mary L., Betizeau, Marion, Cambronne, Xiaolu A., Guzman, Elmer, Doerflinger, Nathalie, Bouhallier, Frantz, Zhou, Hongjun, Wu, Bian, Rani, Neha, Bassett, Danielle S. et al. · 2014 · Neuron
43. Hypoxia-induced miR-424 decreases tumor sensitivity to chemotherapy by inhibiting apoptosis
    Zhang, D, Shi, Z, Li, M, Mi, J · 2014 · Cell Death & Disease
44. BRD4 regulates cellular senescence in gastric cancer cells via E2F/miR-106b/p21 axis
    Dong, Xingchen, Hu, Xiangming, Chen, Jinjing, Hu, Dan, Chen, Lin-Feng · 2018 · Cell Death & Disease
45. Cell stress is related to re-localization of Argonaute 2 and to decreased RNA interference in human cells
    Detzer, Anke, Engel, Christina, Wünsche, Winfried, Sczakiel, Georg · 2011 · Nucleic Acids Research
46. Circular RNA biogenesis is decreased in postmortem cortical gray matter in schizophrenia and may alter the bioavailability of associated miRNA
    Mahmoudi, Ebrahim, Fitzsimmons, Chantel, Geaghan, Michael P., Shannon Weickert, Cynthia, Atkins, Joshua R., Wang, Xi, Cairns, Murray J. · 2019 · Neuropsychopharmacology
47. MicroRNA expression profile and functional analysis reveal that miR-206 is a critical novel gene for the expression of BDNF induced by ketamine.
    Yang, Xiaolin, Yang, Qinyan, Wang, Xiaobin, Luo, Chunqiong, Wan, Yunqiang, Li, Jiali, Liu, Kezhi, Zhou, Min, Zhang, Chunxiang · 2014 · NeuroMolecular Medicine
48. Expression of miR-15/107 Family MicroRNAs in Human Tissues and Cultured Rat Brain Cells
    Wang, Wang-Xia, Danaher, Robert J., Miller, Craig S., Berger, Joseph R., Nubia, Vega G., Wilfred, Bernard S., Neltner, Janna H., Norris, Christopher M., Nelson, Peter T. · 2014 · Genomics, Proteomics & Bioinformatics
49. Prenatal stress changes the glycoprotein GPM6A gene expression and induces epigenetic changes in rat offspring brain
    Monteleone, Melisa C, Adrover, Ezequiela, Pallarés, María Eugenia, Antonelli, Marta C, Frasch, Alberto C, Brocco, Marcela A · 2014 · Epigenetics
50. MicroRNA-9 and microRNA-326 regulate human dopamine D2 receptor expression, and the microRNA-mediated expression regulation is altered by a genetic variant
    Shi, Sandra, Leites, Catherine, He, Deli, Schwartz, Daniel, Moy, Winton, Shi, Jianxin, Duan, Jubao · 2014 · Journal of Biological Chemistry
51. Synaptosomes secrete and uptake functionally active micro<scp>RNA</scp>s via exocytosis and endocytosis pathways
    Xu, Jie, Chen, Qun, Zen, Ke, Zhang, Chenyu, Zhang, Qipeng · 2013 · Journal of Neurochemistry
52. Transcription of the NKG2D ligand MICA is suppressed by the IRE1/XBP1 pathway of the unfolded protein response through the regulation of E2F1
    Obiedat, Akram, Seidel, Einat, Mahameed, Mohamed, Bernani, Orit, Tsukerman, Pinchas, Voutetakis, Konstantinos, Chatziioannou, Aristotelis, Mcmahon, Mari, Avril, Tony, Chevet, Eric et al. · 2019 · The FASEB Journal
53. Differential and Converging Molecular Mechanisms of Antidepressants’ Action in the Hippocampal Dentate Gyrus
    Patrício, Patrícia, Mateus-Pinheiro, António, Irmler, Martin, Alves, Nuno D, Machado-Santos, Ana R, Morais, Mónica, Correia, Joana S, Korostynski, Michal, Piechota, Marcin, Stoffel, Rainer et al. · 2015 · Neuropsychopharmacology
54. MicroRNA Expression in the Glaucomatous Retina
    Jayaram, Hari, Cepurna, William O., Johnson, Elaine C., Morrison, John C. · 2015 · Investigative Opthalmology &amp; Visual Science
55. The future of genetics in psychology and psychiatry: microarrays, genome‐wide association, and non‐coding RNA
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56. An Lmx1b–miR135a2 regulatory circuit modulates Wnt1/Wnt signaling and determines the size of the midbrain dopaminergic progenitor pool
    Anderegg, Angela, Lin, Hsin-Pin, Chen, Jun-An, Caronia-Brown, Giuliana, Cherepanova, Natalya, Yun, Beth, Joksimovic, Milan, Rock, Jason, Harfe, Brian D., Johnson, Randy et al. · 2013 · PLoS Genetics
57. The lncRNA Toolkit: Databases and In Silico Tools for lncRNA Analysis
    Pinkney, Holly R., Wright, Brandon M., Diermeier, Sarah D. · 2020 · Non-Coding RNA
58. Unicellular origin of the animal microRNA machinery
    Bråte, Jon, Neumann, Ralf S., Fromm, Bastian, Haraldsen, Arthur A.B., Tarver, James E., Suga, Hiroshi, Donoghue, Philip C.J., Peterson, Kevin J., Ruiz-Trillo, Iñaki, Grini, Paul E. et al. · 2018 · Current Biology
59. Carbon black nanoparticle intratracheal installation results in large and sustained changes in the expression of miR‐135b in mouse lung
    Bourdon, Julie A., Saber, Anne T., Halappanavar, Sabina, Jackson, Petra A., Wu, Dongmei, Hougaard, Karin S., Jacobsen, Nicklas R., Williams, Andrew, Vogel, Ulla, Wallin, Håkan et al. · 2012 · Environmental and Molecular Mutagenesis
60. The Mitochondria-Associated ER Membranes Are Novel Subcellular Locations Enriched for Inflammatory-Responsive MicroRNAs
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61. Autism genetic database (AGD): a comprehensive database including autism susceptibility gene-CNVs integrated with known noncoding RNAs and fragile sites
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62. Integrative analysis of multi-omics data for identifying multi-markers for diagnosing pancreatic cancer
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63. Multi-omics integration strategies for animal epigenetic studies — A review
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64. Analysis of miRNA expression profiles in breast cancer using biclustering
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65. <i>miR‐34c‐5p</i> modulates X‐box–binding protein 1 (XBP1) expression during the adaptive phase of the unfolded protein response
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66. Differentially-Expressed miRNAs in Ectopic Stromal Cells Contribute to Endometriosis Development: The Plausible Role of miR-139-5p and miR-375
    Rekker, Kadri, Tasa, Tõnis, Saare, Merli, Samuel, Külli, Kadastik, Ülle, Karro, Helle, Götte, Martin, Salumets, Andres, Peters, Maire · 2018 · International Journal of Molecular Sciences
67. miRNAs as therapeutic tools and biomarkers for prostate cancer
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68. Analysis of hepatic transcript profile and plasma lipid profile in early lactating dairy cows fed grape seed and grape marc meal extract
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69. miR-9-5p is involved in the rescue of stress-dependent dendritic shortening of hippocampal pyramidal neurons induced by acute antidepressant treatment with ketamine
    Mingardi, Jessica, La Via, Luca, Tornese, Paolo, Carini, Giulia, Trontti, Kalevi, Seguini, Mara, Tardito, Daniela, Bono, Federica, Fiorentini, Chiara, Elia, Leonardo et al. · 2021 · Neurobiology of Stress
70. Reciprocal regulation of microRNA and mRNA profiles in neuronal development and synapse formation
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71. An Ancestral miR-1304 Allele Present in Neanderthals Regulates Genes Involved in Enamel Formation and Could Explain Dental Differences with Modern Humans
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72. MicroRNAs and Lipoprotein Metabolism
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73. Correlation analysis on the expression levels of microRNA‑23a and microRNA‑23b and the incidence and prognosis of ovarian cancer
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74. Hepatic transcript profiling in early-lactation dairy cows fed rumen-protected niacin during the transition from late pregnancy to lactation
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75. Cancer survival classification using integrated data sets and intermediate information
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76. MiR-30 family: a novel avenue for treating bone and joint diseases?
    Huang, Jinming, Li, Yi, Zhu, Siyi, Wang, Liqiong, Yang, Lin, He, Chengqi · 2023 · International Journal of Medical Sciences
77. Peroxisomal very long-chain fatty acid transport is targeted by herpesviruses and the antiviral host response
    Weinhofer, Isabelle, Buda, Agnieszka, Kunze, Markus, Palfi, Zsofia, Traunfellner, Matthäus, Hesse, Sarah, Villoria-Gonzalez, Andrea, Hofmann, Jörg, Hametner, Simon, Regelsberger, Günther et al. · 2022 · Communications Biology
78. The miR-23-27-24 clusters drive lipid-associated macrophage proliferation in obese adipose tissue
    Sprenkle, Neil T., Winn, Nathan C., Bunn, Kaitlyn E., Zhao, Yang, Park, Deborah J., Giese, Brenna G., Karijolich, John J., Ansel, K. Mark, Serezani, C. Henrique, Hasty, Alyssa H. et al. · 2023 · Cell Reports
79. MicroRNA-378b regulates α-1-type 1 collagen expression via sirtuin 6 interference
    Joo, Dahye, An, Sungkwan, Choi, Byung Gon, Kim, Karam, Choi, Young Min, Ahn, Kyu Joong, An, In-Sook, Cha, Hwa Jun · 2017 · Molecular Medicine Reports
80. Restraint Stress in Mice Alters Set of 25 miRNAs Which Regulate Stress- and Depression-Related mRNAs
    Solich, Joanna, Kuśmider, Maciej, Faron-Górecka, Agata, Pabian, Paulina, Dziedzicka-Wasylewska, Marta · 2020 · International Journal of Molecular Sciences
81. EPAS1 resistance to miRNA-based regulation contributes to prolonged expression of HIF-2 during hypoxia in human endothelial cells
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