The DOI matches its Crossref record; 27 of the 27 references it cites were found in a registry or an index.
Autophagy failure in Alzheimer's disease—locating the primary defect
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Swelling of endosomal compartments enriched in amyloid precursor protein (APP) peptides, lysosomal deficits, and abnormal accumulation of autophagic vacuoles have been observed in human AD brains and corresponding mouse models.
“Swelling of endosomal compartments enriched in amyloid precursor protein (APP) peptides (Takahashi et al. 2002), lysosomal deficits, and abnormal accumulation of autophagic vacuoles have been observed in human AD brains and corresponding mouse models (Cataldo et al. 1997), (Nixon and Yang 2011), (Nixon et al. 2005).”
From TMEM55B downregulation promotes neurodegeneration in Alzheimer’s disease models (2026) · cites this paper as Nixon and Yang 2011
Dysfunctional autophagosomes and lysosomes are early pathological features in Alzheimer's disease (AD), preceding the classical deposition of amyloid-β plaques and Tau-containing neurofibrillary tangles.
“Dysfunctional autophagosomes and lysosomes are recognized as early pathological features in Alzheimer's disease (AD), preceding the classical deposition of amyloid-β plaques and Tau-containing neurofibrillary tangles (Nixon and Yang 2011).”
From TMEM55B downregulation promotes neurodegeneration in Alzheimer’s disease models (2026) · cites this paper as Nixon and Yang 2011
AD brains show enlarged APP-positive endosomes, lysosomal deficits, and autophagic vacuole accumulation.
“AD brains show enlarged APP-positive endosomes (Takahashi et al. 2002), lysosomal deficits, and autophagic vacuole accumulation (Cataldo et al. 1997), (Nixon and Yang 2011), (Nixon et al. 2005).”
From TMEM55B downregulation promotes neurodegeneration in Alzheimer’s disease models (2026) · cites this paper as Nixon and Yang 2011
Autophagosomal-lysosomal dysfunction is an early feature of Alzheimer's disease (AD), preceding amyloid-β and Tau pathology.
“Autophagosomal-lysosomal dysfunction is an early feature of Alzheimer's disease (AD), preceding amyloid-β and Tau pathology (Nixon and Yang 2011).”
From TMEM55B downregulation promotes neurodegeneration in Alzheimer’s disease models (2026) · cites this paper as Nixon and Yang 2011
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Autophagy in the Pathogenesis of Disease
Levine, B., & Kroemer, G. (2008) · Cell · doi:10.1016/j.cell.2007.12.018 · Cited by 7,069
Autophagy fights disease through cellular self-digestion
Mizushima, N., Levine, B., Cuervo, A. M., & Klionsky, D. J. (2008) · Nature · doi:10.1038/nature06639 · Cited by 6,452
Cloning of a gene bearing missense mutations in early-onset familial Alzheimer's disease
Sherrington, R., Rogaev, E. I., Liang, Y., Rogaeva, E. A., Levesque, G., Ikeda, M., Chi, H., Lin, C., Li, G., Holman, K., et al. (1995) · Nature · doi:10.1038/375754a0 · Cited by 4,051
Suppression of basal autophagy in neural cells causes neurodegenerative disease in mice
Hara, T., Nakamura, K., Matsui, M., Yamamoto, A., Nakahara, Y., Suzuki-Migishima, R., Yokoyama, M., Mishima, K., Saito, I., Okano, H., et al. (2006) · Nature · doi:10.1038/nature04724 · Cited by 3,882
Regulation mechanisms and signaling pathways of autophagy
He, C., & Klionsky, D. J. (2009) · Annual Review of Genetics · doi:10.1146/annurev-genet-102808-114910 · Cited by 3,609
Termination of autophagy and reformation of lysosomes regulated by mTOR
Yu, L., McPhee, C. K., Zheng, L., Mardones, G. A., Rong, Y., Peng, J., Mi, N., Zhao, Y., Liu, Z., Wan, F., et al. (2010) · Nature · doi:10.1038/nature09076 · Cited by 1,544
Chishti, M. A., Yang, D.-S., Janus, C., Phinney, A. L., Horne, P., Pearson, J., Strome, R., Zuker, N., Loukides, J., French, J., et al. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m100710200 · Cited by 955
Self-citationPlasma membrane contributes to the formation of pre-autophagosomal structures
Ravikumar, B., Moreau, K., Jahreiss, L., Puri, C., & Rubinsztein, D. C. (2010) · Nature Cell Biology · doi:10.1038/ncb2078 · Cited by 902
Shen, J., & Kelleher, R. J. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0608332104 · Cited by 485
Cataldo, A. M., Barnett, J. L., Berman, S. A., Li, J., Quarless, S., Bursztajn, S., Lippa, C., & Nixon, R. A. (1995) · Neuron · doi:10.1016/0896-6273(95)90324-0 · Cited by 379
Self-citationChui, D.-H., Tanahashi, H., Ozawa, K., Ikeda, S., Checler, F., Ueda, O., Suzuki, H., Araki, W., Inoue, H., Shirotani, K., et al. (1999) · Nature Medicine · doi:10.1038/8438 · Cited by 364
Neurodegenerative lysosomal disorders: A continuum from development to late age
Nixon, R. A., Yang, D.-S., & Lee, J.-H. (2008) · Autophagy · doi:10.4161/auto.6259 · Cited by 362
Self-citationNeuronal loss and brain atrophy in mice lacking cathepsins B and L
Felbor, U., Kessler, B., Mothes, W., Goebel, H. H., Ploegh, H. L., Bronson, R. T., & Olsen, B. R. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.112632299 · Cited by 334
Koike, M., Shibata, M., Waguri, S., Yoshimura, K., Tanida, I., Kominami, E., Gotow, T., Peters, C., von Figura, K., Mizushima, N., et al. (2005) · The American Journal of Pathology · doi:10.1016/s0002-9440(10)61253-9 · Cited by 330
Li, X., Alafuzoff, I., Soininen, H., Winblad, B., & Pei, J. (2005) · The FEBS Journal · doi:10.1111/j.1742-4658.2005.04833.x · Cited by 324
Lysosomes in iron metabolism, ageing and apoptosis
Kurz, T., Terman, A., Gustafsson, B., & Brunk, U. T. (2008) · Histochemistry and Cell Biology · doi:10.1007/s00418-008-0394-y · Cited by 302
Prelysosomal convergence of autophagic and endocytic pathways
Gordon, P. B., & Seglen, P. O. (1988) · Biochemical and Biophysical Research Communications · doi:10.1016/0006-291x(88)90556-6 · Cited by 281 · cited 2×
“The outer membrane of the autophagosome then fuses with a lysosome or a late endosome to form either an autolysosome or an amphisome, respectively, thereby initiating the digestion of sequestered material by a range of acidic hydrolases (Eskelinen, 2005; Fader and Colombo, 2009; Gordon and Seglen, 1988; Liou et al., 1…”
BackgroundChaperone-mediated autophagy: selectivity pays off
Cuervo, A. M. (2010) · Trends in Endocrinology & Metabolism · doi:10.1016/j.tem.2009.10.003 · Cited by 260 · cited 4×
“Strong autophagy induction in associationwith neurodegeneration and autophagic cell death is so far uncommon compared to neurological responses associated with autophagy deficiency (Nixon, 2006; Wong and Cuervo, 2010).”
BackgroundInfluentialCataldo, A. M., Petanceska, S., Peterhoff, C. M., Terio, N. B., Epstein, C. J., Villar, A., Carlson, E. J., Staufenbiel, M., & Nixon, R. A. (2003) · The Journal of Neuroscience · doi:10.1523/jneurosci.23-17-06788.2003 · Cited by 241
Self-citationSun, B., Zhou, Y., Halabisky, B., Lo, I., Cho, S.-H., Mueller-Steiner, S., Devidze, N., Wang, X., Grubb, A., & Gan, L. (2008) · Neuron · doi:10.1016/j.neuron.2008.10.001 · Cited by 231
Autophagic Stress in Neuronal Injury and Disease
Chu, C. T. (2006) · Journal of Neuropathology & Experimental Neurology · doi:10.1097/01.jnen.0000229233.75253.be · Cited by 211 · cited 2×
“2) (Chu, 2006; Wong and Cuervo, 2010).”
BackgroundStarving Neurons Show Sex Difference in Autophagy
Du, L., Hickey, R. W., Bayir, H., Watkins, S. C., Tyurin, V. A., Guo, F., Kochanek, P. M., Jenkins, L. W., Ren, J., Gibson, G., et al. (2009) · Journal of Biological Chemistry · doi:10.1074/jbc.m804396200 · Cited by 204
Ji, Z.-S., Miranda, R. D., Newhouse, Y. M., Weisgraber, K. H., Huang, Y., & Mahley, R. W. (2002) · Journal of Biological Chemistry · doi:10.1074/jbc.m112109200 · Cited by 177
Fine structural localization of acid phosphatase in senile plaques in Alzheimer's presenile dementia
Suzuki, K., & Terry, R. D. (1967) · Acta Neuropathologica · doi:10.1007/bf00688828 · Cited by 169
Oskar Fischer and the study of dementia
Goedert, M. (2008) · Brain · doi:10.1093/brain/awn256 · Cited by 144
Reactivity of Apolipoprotein E4 and Amyloid β Peptide
Ji, Z.-S., Müllendorff, K., Cheng, I. H., Miranda, R. D., Huang, Y., & Mahley, R. W. (2006) · Journal of Biological Chemistry · doi:10.1074/jbc.m506646200 · Cited by 127
Belinson, H., Lev, D., Masliah, E., & Michaelson, D. M. (2008) · The Journal of Neuroscience · doi:10.1523/jneurosci.5633-07.2008 · Cited by 101
Flagged first, then by citations
Research works printed but not linked: 91
- Alirezaei, 2008, Disruption of neuronal autophagy by infected microglia results in neurodegeneration, PLoS ONE, 3, e2906, 10.1371/journal.pone.0002906 · DOI
- Anglade, 1997, Apoptosis and autophagy in nigral neurons of patients with Parkinson's disease, Histol. Histopathol., 12, 25
- Axe, 2008, Autophagosome formation from membrane compartments enriched in phosphatidylinositol 3-phosphate and dynamically connected to the endoplasmic reticulum, J. Cell Biol., 182, 685, 10.1083/jcb.200803137 · DOI · Paper page
- Bednarski, 1997, Suppression of cathepsins B and L causes a proliferation of lysosomes and the formation of meganeurites in hippocampus, J. Neurosci., 17, 4006, 10.1523/JNEUROSCI.17-11-04006.1997 · DOI
- Benzing, 1993, Alzheimer's disease-like dystrophic neurites characteristically associated with senile plaques are not found within other neurodegenerative diseases unless amyloid beta-protein deposition is present, Brain Res., 606, 10, 10.1016/0006-8993(93)91563-8 · DOI
- Bhaskar, 2009, The PI3K-Akt-mTOR pathway regulates Aβ oligomer induced neuronal cell cycle events, Mol. Neurodegener., 4, 14, 10.1186/1750-1326-4-14 · DOI · Paper page
- Boland, 2008, Autophagy induction and autophagosome clearance in neurons: relationship to autophagic pathology in Alzheimer's disease, J. Neurosci., 28, 6926, 10.1523/JNEUROSCI.0800-08.2008 · DOI · Paper page
- Caccamo, 2010, Molecular interplay between mammalian target of rapamycin (mTOR), amyloid-beta, and Tau: effects on cognitive impairments, J. Biol. Chem., 285, 13107, 10.1074/jbc.M110.100420 · DOI · Paper page
- Cataldo, 1996, Properties of the endosomal-lysosomal system in the human central nervous system: disturbances mark most neurons in populations at risk to degenerate in Alzheimer's disease, J. Neurosci., 16, 186, 10.1523/JNEUROSCI.16-01-00186.1996 · DOI
- Cataldo, 2000, Endocytic pathway abnormalities precede amyloid beta deposition in sporadic Alzheimer's disease and Down syndrome: differential effects of APOE genotype and presenilin mutations, Am. J. Pathol., 157, 277, 10.1016/S0002-9440(10)64538-5 · DOI · Paper page
- Cataldo, 2004, Presenilin mutations in familial Alzheimer disease and transgenic mouse models accelerate neuronal lysosomal pathology, J. Neuropathol. Exp. Neurol., 63, 821, 10.1093/jnen/63.8.821 · DOI
- Cataldo, 2008, Down syndrome fibroblast model of Alzheimer-related endosome pathology. Accelerated endocytosis promotes late endocytic defects, Am. J. Pathol., 173, 370, 10.2353/ajpath.2008.071053 · DOI
- Chevrier, 2010, Autophagosome maturation is impaired in Fabry disease, Autophagy, 6, 10.4161/auto.6.5.11943 · DOI
- Cossec, 2010, Clathrin-dependent APP endocytosis and Abeta secretion are highly sensitive to the level of plasma membrane cholesterol, Biochim. Biophys. Acta, 1801, 846, 10.1016/j.bbalip.2010.05.010 · DOI
- Cota, 2006, Hypothalamic mTOR signaling regulates food intake, Science, 312, 927, 10.1126/science.1124147 · DOI · Paper page
- Crews, 2010, Selective molecular alterations in the autophagy pathway in patients with Lewy body disease and in models of alpha-synucleinopathy, PLoS ONE, 5, e9313, 10.1371/journal.pone.0009313 · DOI
- Cuervo, 2004, Autophagy: many paths to the same end, Mol. Cell. Biochem., 263, 55, 10.1023/B:MCBI.0000041848.57020.57 · DOI
- Dennemarker, 2010, Impaired turnover of autophagolysosomes in cathepsin L deficiency, Biol. Chem., 397, 913
- Diaz-Troya, 2008, The role of TOR in autophagy regulation from yeast to plants and mammals, Autophagy, 4, 851, 10.4161/auto.6555 · DOI
- Eckhardt, 2010, Pathology and current treatment of neurodegenerative sphingolipidoses, Neuromolecular Med., 12, 362, 10.1007/s12017-010-8133-7 · DOI
- Eskelinen, 2005, Maturation of autophagic vacuoles in mammalian cells, Autophagy, 1, 1, 10.4161/auto.1.1.1270 · DOI · Paper page
- Esselens, 2004, Presenilin 1 mediates the turnover of telencephalin in hippocampal neurons via an autophagic degradative pathway, J. Cell Biol., 166, 1041, 10.1083/jcb.200406060 · DOI
- Fader, 2009, Autophagy and multivesicular bodies: two closely related partners, Cell Death Differ., 16, 70, 10.1038/cdd.2008.168 · DOI
- Fukuda, 2006, Dysfunction of endocytic and autophagic pathways in a lysosomal storage disease, Ann. Neurol., 59, 700, 10.1002/ana.20807 · DOI
- Funderburk, 2010, The Beclin 1-VPS34 complex—at the crossroads of autophagy and beyond, Trends Cell Biol., 20, 355, 10.1016/j.tcb.2010.03.002 · DOI
- Garcia-Marin, 2007, Cajal's contributions to the study of Alzheimer's disease, J. Alzheimers Dis., 12, 161, 10.3233/JAD-2007-12206 · DOI
- Geng, 2010, Post-golgi sec proteins are required for autophagy in Saccharomyces cerevisiae, Mol. Biol. Cell, 21, 2257, 10.1091/mbc.E09-11-0969 · DOI
- Ginsberg, 2000, Expression profile of transcripts in Alzheimer's disease tangle-bearing CA1 neurons, Ann. Neurol., 48, 77, 10.1002/1531-8249(200007)48:1<77::AID-ANA12>3.0.CO;2-A · DOI
- Ginsberg, 2010, Microarray analysis of hippocampal CA1 neurons implicates early endosomal dysfunction during Alzheimer's disease progression, Biol. Psychiatry, 68, 885, 10.1016/j.biopsych.2010.05.030 · DOI · Paper page
- Glabe, 2001, Intracellular mechanisms of amyloid accumulation and pathogenesis in Alzheimer's disease, J. Mol. Neurosci., 17, 137, 10.1385/JMN:17:2:137 · DOI · Paper page
- Grbovic, 2003, Rab5-stimulated up-regulation of the endocytic pathway increases intracellular beta-cleaved amyloid precursor protein carboxyl-terminal fragment levels and Abeta production, J. Biol. Chem., 278, 31261, 10.1074/jbc.M304122200 · DOI
- Griffin, 1988, Axonal transport in neurological disease, Ann. Neurol., 23, 3, 10.1002/ana.410230103 · DOI
- Guo, 1997, Alzheimer's presenilin mutation sensitizes neural cells to apoptosis induced by trophic factor withdrawal and amyloid beta-peptide: involvement of calcium and oxyradicals, J. Neurosci., 17, 4212, 10.1523/JNEUROSCI.17-11-04212.1997 · DOI
- Hailey, 2010, Mitochondria supply membranes for autophagosome biogenesis during starvation, Cell, 141, 656, 10.1016/j.cell.2010.04.009 · DOI
- Hay, 2004, Upstream and downstream of mTOR, Genes Dev., 18, 1926, 10.1101/gad.1212704 · DOI · Paper page
- Hayashi-Nishino, 2009, A subdomain of the endoplasmic reticulum forms a cradle for autophagosome formation, Nat. Cell Biol., 11, 1433, 10.1038/ncb1991 · DOI
- He, 2010, The beclin 1 interactome, Curr. Opin. Cell Biol., 22, 140, 10.1016/j.ceb.2010.01.001 · DOI
- Itakura, 2010, Characterization of autophagosome formation site by a hierarchical analysis of mammalian Atg proteins, Autophagy, 6, 764, 10.4161/auto.6.6.12709 · DOI · Paper page
- Ivy, 1984, Inhibitors of lysosomal enzymes: accumulation of lipofuscin-like dense bodies in the brain, Science, 226, 985, 10.1126/science.6505679 · DOI
- Ivy, 1989, Lipofuscin-like substances accumulate rapidly in brain, retina and internal organs with cysteine protease inhibition, Adv. Exp. Med. Biol., 266, 31
- Jeyakumar, 2005, Storage solutions: treating lysosomal disorders of the brain, Nat. Rev. Neurosci., 6, 713, 10.1038/nrn1725 · DOI
- Jiang, 2010, Alzheimer's-related endosome dysfunction in Down syndrome is Abeta-independent but requires APP and is reversed by BACE-1 inhibition, Proc. Natl Acad. Sci. USA, 107, 1630, 10.1073/pnas.0908953107 · DOI
- Klionsky, 2010, A comprehensive glossary of autophagy-related molecules and processes, Autophagy, 6, 438, 10.4161/auto.6.4.12244 · DOI
- Koike, 2000, Cathepsin D deficiency induces lysosomal storage with ceroid lipofuscin in mouse CNS neurons, J. Neurosci., 20, 6898, 10.1523/JNEUROSCI.20-18-06898.2000 · DOI
- Komatsu, 2006, Loss of autophagy in the central nervous system causes neurodegeneration in mice, Nature, 441, 880, 10.1038/nature04723 · DOI · Paper page
- Lee, 2010, Presenilin 1 (PS1) is required for v-ATPase targeting and autolysosome acidification: PS1 mutations in Alzheimer's disease disrupt lysosomal proteolysis and autophagy, Cell, 141, 1146, 10.1016/j.cell.2010.05.008 · DOI · Paper page
- Liberski, 1995, Neuroaxonal dystrophy in experimental Creutzfeldt–Jakob disease: electron microscopical and immunohistochemical demonstration of neurofilament accumulations within affected neurites, J. Comp. Pathol., 112, 243, 10.1016/S0021-9975(05)80078-7 · DOI
- Ling, 2009, Abeta42-induced neurodegeneration via an age-dependent autophagic-lysosomal injury in Drosophila, PLoS ONE, 4, e4201, 10.1371/journal.pone.0004201 · DOI
- Liou, 1997, The autophagic and endocytic pathways converge at the nascent autophagic vacuoles, J. Cell Biol., 136, 61, 10.1083/jcb.136.1.61 · DOI
- Lipinski, 2010, Genome-wide analysis reveals mechanisms modulating autophagy in normal brain aging and in Alzheimer's disease, Proc. Natl Acad. Sci. USA, 107, 14164, 10.1073/pnas.1009485107 · DOI · Paper page
- Mahley, 2006, Apolipoprotein (apo) E4 and Alzheimer's disease: unique conformational and biophysical properties of apoE4 can modulate neuropathology, Acta Neurol. Scand. Suppl., 185, 8, 10.1111/j.1600-0404.2006.00679.x · DOI
- Masliah, 1993, Re-evaluation of the structural organization of the neuritic plaques in Alzheimer's disease, J. Neuropathol. Exp. Neurol., 52, 619, 10.1097/00005072-199311000-00009 · DOI · Paper page
- Mizushima, 2004, In vivo analysis of autophagy in response to nutrient starvation using transgenic mice expressing a fluorescent autophagosome marker, Mol. Biol. Cell, 15, 1101, 10.1091/mbc.E03-09-0704 · DOI · Paper page
- Mueller-Steiner, 2006, Antiamyloidogenic and neuroprotective functions of cathepsin B: implications for Alzheimer's disease, Neuron, 51, 703, 10.1016/j.neuron.2006.07.027 · DOI
- Mufson, 2002, Gene expression profiles of cholinergic nucleus basalis neurons in Alzheimer's disease, Neurochem. Res., 27, 1035, 10.1023/A:1020952704398 · DOI
- Nixon, 2004, Niemann–Pick type C disease and Alzheimer's disease: the APP-endosome connection fattens up, Am. J. Pathol., 164, 757, 10.1016/S0002-9440(10)63163-X · DOI
- Nixon, 2006, Autophagy in neurodegenerative disease: friend, foe or turncoat?, Trends Neurosci., 29, 528, 10.1016/j.tins.2006.07.003 · DOI
- Nixon, 2007, Autophagy, amyloidogenesis and Alzheimer disease, J. Cell Sci., 120, 4081, 10.1242/jcs.019265 · DOI · Paper page
- Nixon, 2006, Lysosomal system pathways: genes to neurodegeneration in Alzheimer's disease, J. Alzheimers Dis., 9, 277, 10.3233/JAD-2006-9S331 · DOI
- Nixon, 2005, Extensive involvement of autophagy in Alzheimer disease: an immuno-electron microscopy study, J. Neuropathol. Exp. Neurol., 64, 113, 10.1093/jnen/64.2.113 · DOI · Paper page
- Noda, 2009, The late stages of autophagy: how does the end begin?, Cell Death Differ., 16, 984, 10.1038/cdd.2009.54 · DOI
- Ohmi, 2009, Sanfilippo syndrome type B, a lysosomal storage disease, is also a tauopathy, Proc. Natl Acad. Sci. USA, 106, 8332, 10.1073/pnas.0903223106 · DOI
- Perry, 2002, Is oxidative damage the fundamental pathogenic mechanism of Alzheimer's and other neurodegenerative diseases?, Free Radic. Biol. Med., 33, 1475, 10.1016/S0891-5849(02)01113-9 · DOI
- Pickford, 2008, The autophagy-related protein beclin 1 shows reduced expression in early Alzheimer disease and regulates amyloid beta accumulation in mice, J. Clin. Invest., 118, 2190
- Rose, 2010, Rilmenidine attenuates toxicity of polyglutamine expansions in a mouse model of Huntington's disease, Hum. Mol. Genet., 19, 2144, 10.1093/hmg/ddq093 · DOI
- Rubinsztein, 2010, Rapamycin induces autophagic flux in neurons, Proc. Natl Acad. Sci., 107, E181, 10.1073/pnas.1014633107 · DOI
- Rudnicki, 2008, A comparison of Huntington disease and Huntington disease-like 2 neuropathology, J. Neuropathol. Exp. Neurol., 67, 366, 10.1097/NEN.0b013e31816b4aee · DOI
- Ryazantsev, 2007, Lysosomal accumulation of SCMAS (subunit c of mitochondrial ATP synthase) in neurons of the mouse model of mucopolysaccharidosis III B, Mol. Genet. Metab., 90, 393, 10.1016/j.ymgme.2006.11.006 · DOI
- Schmidt, 1985, Ultrastructural appearance of intentionally frustrated axonal regeneration in rat sciatic nerve, J. Neuropathol. Exp. Neurol., 44, 130, 10.1097/00005072-198503000-00002 · DOI
- Schmidt, 1994, An extensive network of PHF tau-rich dystrophic neurites permeates neocortex and nearly all neuritic and diffuse amyloid plaques in Alzheimer disease, FEBS Lett., 344, 69, 10.1016/0014-5793(94)00259-2 · DOI
- Settembre, 2008, Proteoglycan desulfation determines the efficiency of chondrocyte autophagy and the extent of FGF signaling during endochondral ossification, Genes Dev., 22, 2645, 10.1101/gad.1711308 · DOI
- Takeuchi, 2001, Transient accumulation of Gallyas–Braak-positive and phosphorylated tau-immunopositive substances in neuronal lipofuscin granules in the amygdala, hippocampus and entorhinal cortex of rats during long-term chloroquine intoxication, Acta Neuropathol., 102, 191, 10.1007/s004010100360 · DOI
- Terman, 2006, Oxidative stress, accumulation of biological ‘garbage’, and aging, Antioxid. Redox Signal., 8, 197, 10.1089/ars.2006.8.197 · DOI
- Terry, 1964, The ultrastructure of the cerebral cortex in Alzheimer's disease, Trans. Am. Neurol. Assoc., 89, 12
- Tian, 2010, C. elegans screen identifies autophagy genes specific to multicellular organisms, Cell, 141, 1042, 10.1016/j.cell.2010.04.034 · DOI · Paper page
- Tsvetkov, 2009, Protein turnover differences between neurons and other cells, Autophagy, 5
- Tsvetkov, 2010, A small-molecule scaffold induces autophagy in primary neurons and protects against toxicity in a Huntington disease model, Proc. Natl Acad. Sci. USA, 107, 16982, 10.1073/pnas.1004498107 · DOI · Paper page
- Walkley, 1998, Cellular pathology of lysosomal storage disorders, Brain Pathol., 8, 175, 10.1111/j.1750-3639.1998.tb00144.x · DOI
- Walkley, 2009, Pathogenic cascades in lysosomal disease—why so complex?, J. Inherit. Metab. Dis., 32, 181, 10.1007/s10545-008-1040-5 · DOI
- Wilson, 2004, Degradative organelles containing mislocalized α- and β-synuclein proliferate in presenilin-1 null neurons, J. Cell Biol., 165, 335, 10.1083/jcb.200403061 · DOI
- Wirtschafter, 1977, Intraocular axonal swelling produced by partial, immediately retrobulbar ligature of optic nerve, Investig. Ophthalmol. Vis. Sci., 16, 537
- Wong, 2010, Autophagy gone awry in neurodegenerative diseases, Nat. Neurosci., 13, 805, 10.1038/nn.2575 · DOI · Paper page
- Xie, 2007, Autophagosome formation: core machinery and adaptations, Nat. Cell Biol., 9, 1102, 10.1038/ncb1007-1102 · DOI
- Yang, 1998, Loss of endosomal/lysosomal membrane impermeability is an early event in amyloid Abeta1-42 pathogenesis, J. Neurosci. Res., 52, 691, 10.1002/(SICI)1097-4547(19980615)52:6<691::AID-JNR8>3.0.CO;2-3 · DOI
- Yang, 2008, Neuronal apoptosis and autophagy cross talk in aging PS/APP mice, a model of Alzheimer's disease, Am. J. Pathol., 173, 665, 10.2353/ajpath.2008.071176 · DOI
- Yang, 2011, Reversal of autophagy dysfunction in the TgCRND8 mouse model of Alzheimer's disease ameliorates amyloid pathologies and memory deficits, Brain, 134, 258, 10.1093/brain/awq341 · DOI · Paper page
- Yoshimori, 1991, Bafilomycin A1, a specific inhibitor of vacuolar-type H(+)-ATPase, inhibits acidification and protein degradation in lysosomes of cultured cells, J. Biol. Chem., 266, 17707, 10.1016/S0021-9258(19)47429-2 · DOI
- Yu, 2005, Macroautophagy—a novel β-amyloid peptide-generating pathway activated in Alzheimer's disease, J. Cell Biol., 171, 87, 10.1083/jcb.200505082 · DOI · Paper page
- Yue, 2002, A novel protein complex linking the delta 2 glutamate receptor and autophagy: implications for neurodegeneration in lurcher mice, Neuron, 35, 921, 10.1016/S0896-6273(02)00861-9 · DOI · Paper page
- Zhou, 1998, Frontotemporal dementia: neuropil spheroids and presynaptic terminal degeneration, Ann. Neurol., 44, 99, 10.1002/ana.410440116 · DOI
- Zhu, 2007, Alzheimer disease, the two-hit hypothesis: an update, Biochim. Biophys. Acta, 1772, 494, 10.1016/j.bbadis.2006.10.014 · DOI
Cited by
Sorted by citations
Knopman, D. S., Amieva, H., Petersen, R. C., Chételat, G., Holtzman, D. M., Hyman, B. T., Nixon, R. A., & Jones, D. T. (2021) · Nature Reviews Disease Primers · doi:10.1038/s41572-021-00269-y · Cited by 2,606
Self-citationAlzheimer Mechanisms and Therapeutic Strategies
Huang, Y., & Mucke, L. (2012) · Cell · doi:10.1016/j.cell.2012.02.040 · Cited by 1,758
Degradation of misfolded proteins in neurodegenerative diseases: Therapeutic targets and strategies
Ciechanover, A., & Kwon, Y. T. (2015) · Experimental & Molecular Medicine · doi:10.1038/emm.2014.117 · Cited by 898
The lysosome: from waste bag to potential therapeutic target
Appelqvist, H., Wäster, P., Kågedal, K., & Öllinger, K. (2013) · Journal of Molecular Cell Biology · doi:10.1093/jmcb/mjt022 · Cited by 772
The case for rejecting the amyloid cascade hypothesis
Herrup, K. (2015) · Nature Neuroscience · doi:10.1038/nn.4017 · Cited by 768
Lee, J.-H., Yang, D.-S., Goulbourne, C. N., Im, E., Stavrides, P., Pensalfini, A., Chan, H., Bouchet-Marquis, C., Bleiwas, C., Berg, M. J., et al. (2022) · Nature Neuroscience · doi:10.1038/s41593-022-01084-8 · Cited by 638
Self-citationColacurcio, D. J., & Nixon, R. A. (2016) · Ageing Research Reviews · doi:10.1016/j.arr.2016.05.004 · Cited by 548
Self-citationDeciphering the mechanism underlying late-onset Alzheimer disease
Krstic, D., & Knuesel, I. (2013) · Nature Reviews Neurology · doi:10.1038/nrneurol.2012.236 · Cited by 457
Synapses and Alzheimer's Disease
Sheng, M., Sabatini, B. L., & Sudhof, T. C. (2012) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a005777 · Cited by 436
Neuronal Cell Death Mechanisms in Major Neurodegenerative Diseases
Chi, H., Chang, H.-Y., & Sang, T.-K. (2018) · International Journal of Molecular Sciences · doi:10.3390/ijms19103082 · Cited by 412
Lee, J.-H., McBrayer, M. K., Wolfe, D. M., Haslett, L. J., Kumar, A., Sato, Y., Lie, P. P. Y., Mohan, P., Coffey, E. E., Kompella, U., et al. (2015) · Cell Reports · doi:10.1016/j.celrep.2015.07.050 · Cited by 358
Self-citationBordi, M., Berg, M. J., Mohan, P. S., Peterhoff, C. M., Alldred, M. J., Che, S., Ginsberg, S. D., & Nixon, R. A. (2016) · Autophagy · doi:10.1080/15548627.2016.1239003 · Cited by 353
Self-citationChaperone-mediated autophagy prevents collapse of the neuronal metastable proteome
Bourdenx, M., Martín-Segura, A., Scrivo, A., Rodriguez-Navarro, J. A., Kaushik, S., Tasset, I., Diaz, A., Storm, N. J., Xin, Q., Juste, Y. R., et al. (2021) · Cell · doi:10.1016/j.cell.2021.03.048 · Cited by 337
Amyloid-Beta Protein Clearance and Degradation (ABCD) Pathways and their Role in Alzheimer’s Disease
Baranello, R., Bharani, K., Padmaraju, V., Chopra, N., Lahiri, D., Greig, N., Pappolla, M., & Sambamurti, K. (2015) · Current Alzheimer Research · doi:10.2174/1567205012666141218140953 · Cited by 331
Mitochondria and Calcium in Alzheimer’s Disease: From Cell Signaling to Neuronal Cell Death
Calvo-Rodriguez, M., & Bacskai, B. J. (2021) · Trends in Neurosciences · doi:10.1016/j.tins.2020.10.004 · Cited by 254
Shin, J. Y., Park, H. J., Kim, H. N., Oh, S. H., Bae, J.-S., Ha, H.-J., & Lee, P. H. (2014) · Autophagy · doi:10.4161/auto.26508 · Cited by 243
Sanchez-Varo, R., Trujillo-Estrada, L., Sanchez-Mejias, E., Torres, M., Baglietto-Vargas, D., Moreno-Gonzalez, I., De Castro, V., Jimenez, S., Ruano, D., Vizuete, M., et al. (2012) · Acta Neuropathologica · doi:10.1007/s00401-011-0896-x · Cited by 222
Endo-lysosomal dysregulations and late-onset Alzheimer’s disease: impact of genetic risk factors
Van Acker, Z. P., Bretou, M., & Annaert, W. (2019) · Molecular Neurodegeneration · doi:10.1186/s13024-019-0323-7 · Cited by 222
Lauritzen, I., Pardossi-Piquard, R., Bourgeois, A., Pagnotta, S., Biferi, M.-G., Barkats, M., Lacor, P., Klein, W., Bauer, C., & Checler, F. (2016) · Acta Neuropathologica · doi:10.1007/s00401-016-1577-6 · Cited by 219
Tau Protein Interaction Partners and Their Roles in Alzheimer’s Disease and Other Tauopathies
Sinsky, J., Pichlerova, K., & Hanes, J. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms22179207 · Cited by 220
Lysosomal cell death mechanisms in aging
Gómez-Sintes, R., Ledesma, M. D., & Boya, P. (2016) · Ageing Research Reviews · doi:10.1016/j.arr.2016.02.009 · Cited by 216
Autophagy in Alzheimer’s disease
Zare-shahabadi, A., Masliah, E., Johnson, G. V. W., & Rezaei, N. (2015) · Reviews in the Neurosciences · doi:10.1515/revneuro-2014-0076 · Cited by 204
Lauritzen, I., Pardossi-Piquard, R., Bauer, C., Brigham, E., Abraham, J.-D., Ranaldi, S., Fraser, P., St-George-Hyslop, P., Le Thuc, O., Espin, V., et al. (2012) · The Journal of Neuroscience · doi:10.1523/jneurosci.2775-12.2012 · Cited by 201
“Moreover, defective lysosomal proteolysis can be accompanied by a failure of autophagic degradation (Nixon et al., 2000; Nixon, 2006; Nixon and Yang, 2011) and autophagic vacuoles can themselves be sites for APP proteolysis since these structures are enriched in both - and -secretase activities (Yu…”
BackgroundThe Ubiquitin-Proteasome System and the Autophagic-Lysosomal System in Alzheimer Disease
Ihara, Y., Morishima-Kawashima, M., & Nixon, R. (2012) · Cold Spring Harbor Perspectives in Medicine · doi:10.1101/cshperspect.a006361 · Cited by 190
Self-citationSilva, M. C., Nandi, G. A., Tentarelli, S., Gurrell, I. K., Jamier, T., Lucente, D., Dickerson, B. C., Brown, D. G., Brandon, N. J., & Haggarty, S. J. (2020) · Nature Communications · doi:10.1038/s41467-020-16984-1 · Cited by 157
The Role of Cathepsin D in the Pathogenesis of Human Neurodegenerative Disorders
Vidoni, C., Follo, C., Savino, M., Melone, M. A. B., & Isidoro, C. (2016) · Medicinal Research Reviews · doi:10.1002/med.21394 · Cited by 164
Alzheimer’s Disease Pathogenesis: Role of Autophagy and Mitophagy Focusing in Microglia
Eshraghi, M., Adlimoghaddam, A., Mahmoodzadeh, A., Sharifzad, F., Yasavoli-Sharahi, H., Lorzadeh, S., Albensi, B. C., & Ghavami, S. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms22073330 · Cited by 158
Carvalho, C., Santos, M. S., Oliveira, C. R., & Moreira, P. I. (2015) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/j.bbadis.2015.05.001 · Cited by 145
Ultrastructural evidence of microglial heterogeneity in Alzheimer’s disease amyloid pathology
El Hajj, H., Savage, J. C., Bisht, K., Parent, M., Vallières, L., Rivest, S., & Tremblay, M.-È. (2019) · Journal of Neuroinflammation · doi:10.1186/s12974-019-1473-9 · Cited by 119
Qiu, L., Ng, G., Tan, E. K., Liao, P., Kandiah, N., & Zeng, L. (2016) · Scientific Reports · doi:10.1038/srep23964 · Cited by 115
Yang, D.-S., Stavrides, P., Saito, M., Kumar, A., Rodriguez-Navarro, J. A., Pawlik, M., Huo, C., Walkley, S. U., Saito, M., Cuervo, A. M., et al. (2014) · Brain · doi:10.1093/brain/awu278 · Cited by 114
Self-citationAmyloid‐β impairs the phagocytosis of dystrophic synapses by astrocytes in Alzheimer's disease
Sanchez‐Mico, M. V., Jimenez, S., Gomez‐Arboledas, A., Muñoz‐Castro, C., Romero‐Molina, C., Navarro, V., Sanchez‐Mejias, E., Nuñez‐Diaz, C., Sanchez‐Varo, R., Galea, E., et al. (2021) · Glia · doi:10.1002/glia.23943 · Cited by 93
Di Domenico, F., Tramutola, A., Foppoli, C., Head, E., Perluigi, M., & Butterfield, D. A. (2018) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2017.08.009 · Cited by 89
NRBF2 is involved in the autophagic degradation process of APP-CTFs in Alzheimer disease models
Yang, C., Cai, C.-Z., Song, J.-X., Tan, J.-Q., Durairajan, S. S. K., Iyaswamy, A., Wu, M.-Y., Chen, L.-L., Yue, Z., Li, M., et al. (2017) · Autophagy · doi:10.1080/15548627.2017.1379633 · Cited by 83
Im, E., Jiang, Y., Stavrides, P. H., Darji, S., Erdjument-Bromage, H., Neubert, T. A., Choi, J. Y., Wegiel, J., Lee, J.-H., & Nixon, R. A. (2023) · Science Advances · doi:10.1126/sciadv.adg1925 · Cited by 80
Self-citationLiu, D., Zhang, Y., Gharavi, R., Park, H. R., Lee, J., Siddiqui, S., Telljohann, R., Nassar, M. R., Cutler, R. G., Becker, K. G., et al. (2015) · Journal of Neurochemistry · doi:10.1111/jnc.13176 · Cited by 68
“Previous studies have provided evidence that impaired autophagy occurs in neurons in Alzheimer’s and Parkinson’s diseases (Nixon and Yang 2011; Manzoni and Lewis 2013), and that the mTOR inhibitor rapamycin can up-regulate autophagy and protect neurons against dysfunction and degeneration in…”
BackgroundChong, C.-M., Ke, M., Tan, Y., Huang, Z., Zhang, K., Ai, N., Ge, W., Qin, D., Lu, J.-H., & Su, H. (2018) · Cell Death & Disease · doi:10.1038/s41419-018-0945-7 · Cited by 66
The Implications of Autophagy in Alzheimer’s Disease
Hamano, T., Hayashi, K., Shirafuji, N., & Nakamoto, Y. (2018) · Current Alzheimer Research · doi:10.2174/1567205015666181004143432 · Cited by 57
Tong, B. C.-K., Wu, A. J., Huang, A. S., Dong, R., Malampati, S., Iyaswamy, A., Krishnamoorthi, S., Sreenivasmurthy, S. G., Zhu, Z., Su, C., et al. (2022) · Autophagy · doi:10.1080/15548627.2021.1945220 · Cited by 49
Tramutola, A., Di Domenico, F., Barone, E., Arena, A., Giorgi, A., di Francesco, L., Schininà, M. E., Coccia, R., Head, E., Butterfield, D. A., et al. (2017) · Antioxidants & Redox Signaling · doi:10.1089/ars.2016.6686 · Cited by 49
Sullivan, S. E., Liao, M., Smith, R. V., White, C., Lagomarsino, V. N., Xu, J., Taga, M., Bennett, D. A., De Jager, P. L., & Young-Pearse, T. L. (2019) · Human Molecular Genetics · doi:10.1093/hmg/ddy376 · Cited by 44
Suelves, N., Saleki, S., Ibrahim, T., Palomares, D., Moonen, S., Koper, M. J., Vrancx, C., Vadukul, D. M., Papadopoulos, N., Viceconte, N., et al. (2023) · Acta Neuropathologica Communications · doi:10.1186/s40478-023-01578-x · Cited by 43
H. Swerdlow, R. (2011) · Current Pharmaceutical Design · doi:10.2174/138161211798072535 · Cited by 35
Mechanisms of Neuron Loss in Alzheimer’s Disease
Mukhin, V. N., Pavlov, K. I., & Klimenko, V. M. (2017) · Neuroscience and Behavioral Physiology · doi:10.1007/s11055-017-0427-x · Cited by 27
Rapamycin prevents the mutant huntingtin-suppressed GLT-1 expression in cultured astrocytes
Chen, L.-L., Wu, J.-C., Wang, L.-H., Wang, J., Qin, Z.-H., Difiglia, M., & Lin, F. (2012) · Acta Pharmacologica Sinica · doi:10.1038/aps.2011.162 · Cited by 26
Scrutinizing the Therapeutic Potential of PROTACs in the Management of Alzheimer’s Disease
Bhatia, S., Singh, M., Singh, T., & Singh, V. (2023) · Neurochemical Research · doi:10.1007/s11064-022-03722-w · Cited by 22
MicroRNA Profiling in Aging Brain of PSEN1/PSEN2 Double Knockout Mice
Ham, S., Kim, T. K., Lee, S., Tang, Y.-P., & Im, H.-I. (2018) · Molecular Neurobiology · doi:10.1007/s12035-017-0753-6 · Cited by 12
TMEM55B downregulation promotes neurodegeneration in Alzheimer’s disease models
Roy, B., Contu, V. R., Jeziorek, M., Friedman, W. J., & Wong, C.-O. (2026) · doi:10.64898/2026.10.21.760809
Metadata
- Authors
- Nixon, R. A., & Yang, D.-S.
- Venue
- Neurobiology of Disease
- Publisher
- Elsevier BV
- Published
- 2011-07
- Volume
- 43
- Issue
- 1
- Pages
- 38-45
- ISSN
- 0969-9961
- PMC
- PMC3096679
- Cited by
- 595
- References
- 27
- Language
- en
- Funders
- National Institute on Aging and the Alzheimer's Association
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review