Treatment strategies for cryptococcal infection: challenges, advances and future outlook
Open accessAbstract
Cryptococcus spp., in particular Cryptococcus neoformans and Cryptococcus gattii, have an enormous impact on human health worldwide. The global burden of cryptococcal meningitis is almost a quarter of a million cases and 181,000 deaths annually, with mortality rates of 100% if infections remain untreated. Despite these alarming statistics, treatment options for cryptococcosis remain limited, with only three major classes of drugs approved for clinical use. Exacerbating the public health burden is the fact that the only new class of antifungal drugs developed in decades, the echinocandins, displays negligible antifungal activity against Cryptococcus spp., and the efficacy of the remaining therapeutics is hampered by host toxicity and pathogen resistance. Here, we describe the current arsenal of antifungal agents and the treatment strategies employed to manage cryptococcal disease. We further elaborate on the recent advances in our understanding of the intrinsic and adaptive resistance mechanisms that are utilized by Cryptococcus spp. to evade therapeutic treatments. Finally, we review potential therapeutic strategies, including combination therapy, the targeting of virulence traits, impairing stress response pathways and modulating host immunity, to effectively treat infections caused by Cryptococcus spp. Overall, understanding of the mechanisms that regulate anti-cryptococcal drug resistance, coupled with advances in genomics technologies and high-throughput screening methodologies, will catalyse innovation and accelerate antifungal drug discovery. Cryptococcosis is a serious fungal infection for which treatment options are limited. In this Review, Cowen and colleagues discuss the current antifungal treatments available for cryptococcal infections, the challenges in developing new treatments, and ongoing efforts to identify novel therapies.
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Written from the paper’s full text.
TL;DR
This review summarizes the limited current arsenal against cryptococcal infection, the intrinsic and adaptive resistance mechanisms used by *Cryptococcus* spp., and emerging therapeutic strategies. It highlights combination therapy, virulence-factor and stress-response targeting, drug repurposing, and immunotherapy/vaccine approaches as promising but still mostly preclinical or early-clinical directions.
Key findings
- Cryptococcal meningitis causes an estimated 223,100 cases and 181,100 deaths annually, with 100% mortality if untreated; only three major antifungal classes are approved, and echinocandins have negligible activity against *Cryptococcus* spp.
- Resistance involves genomic plasticity, including aneuploidy (most commonly chromosome 1 disomy involving *ERG11* and *AFR1*), hypermutator strains with ~200-fold higher mutation rates, and transposon movement; hypermutator *C. gattii* strains showed a 15% higher rate of flucytosine resistance.
- Morphological changes contribute to resistance: thicker capsules and cell walls increase antifungal resistance, and titan cells are defined by >10 µm size, >4C ploidy, a thick cell wall, and a highly crosslinked capsule; ~20% of fungal cells in mouse lungs can become titan cells.
- The phase III amphotericin B plus flucytosine regimen followed by fluconazole reduced 10-week mortality to 24%, compared with ~70% mortality in many low- and middle-income African countries; repurposed sertraline and tamoxifen failed to improve outcomes in later trials.
Methods
- Narrative review synthesizing published literature on cryptococcal treatment, antifungal resistance mechanisms, drug discovery, and immunotherapy; no primary experimental data are reported.
- Evidence discussed includes clinical trials, mouse infection models, genomic and chemical-genetic screens, and high-throughput compound screens, such as >300,000 compounds screened for fungicidal activity and ~3,600 bioactive compounds tested for synergy.
- No systematic search strategy, inclusion criteria, or meta-analysis is described.
Limitations
- Stated in the paper: treatment is limited by intrinsic echinocandin resistance, azole resistance, amphotericin B toxicity, flucytosine resistance and monotherapy limitations, and poor access/cost in resource-limited settings; several promising agents remain preclinical or have failed clinical trials, and 18B7 showed poor cerebrospinal fluid penetration.
- Evident from the text: as a narrative review, it does not provide a systematic or quantitative synthesis, and its conclusions depend on the selected cited literature rather than a predefined review protocol.
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- Findingcitation
A subset of Cryptococcus isolates have been identified as hypermutator strains, which contain mutations in core genes in the DNA mismatch repair pathway, most notably MSH2.
“a subset of Cryptococcus isolates have been identified as hypermutator strains30,31, which contain mutations in core genes in the DNA mismatch repair pathway, most notably MSH2 (refs30,32,33)”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [30] Boyce, K. J. et al. Mismatch repair of DNA replication errors contributes to microevolution in the pathogenic fungus Cryptococcus neoformans. mBio 8, e00595-17 (2017). This report is one of the first of a hypermutator strain in clinical isolates, which has a fitness advantage owing to mutations in mismatch repair genes. source
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- cites [31] Boyce, K. J., Cao, C., Xue, C. & Idnurm, A. A spontaneous mutation in DNA polymerase POL3 during in vitro passaging causes a hypermutator phenotype in Cryptococcus species. DNA Repair 86, 102751 (2020). source
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- cites [32] Billmyre, R. B., Applen Clancey, S., Li, L. X., Doering, T. L. & Heitman, J. 5-Fluorocytosine resistance is associated with hypermutation and alterations in capsule biosynthesis in Cryptococcus. Nat. Commun. 11, 127 (2020). source
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- Findingcitation
A mutation in the proofreading domain of POL3 was shown to confer the hypermutator phenotype.
“a mutation in the proofreading domain of POL3 (encoding the catalytic subunit of DNA polymerase δ) was also shown to confer the hypermutator phenotype31.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [31] Boyce, K. J., Cao, C., Xue, C. & Idnurm, A. A spontaneous mutation in DNA polymerase POL3 during in vitro passaging causes a hypermutator phenotype in Cryptococcus species. DNA Repair 86, 102751 (2020). source
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- Findingcitation
Laboratory studies have shown that selection for resistance to environmental agrochemicals, primarily through upregulation of ERG11 and drug efflux pumps, can lead to cross-resistance to clinically deployed antifungals.
“Laboratory studies have shown that selection for resistance to environmental agrochemicals, primarily through the upregulation of the azole target gene ERG11 and drug efflux pumps, can lead to cross-resistance to clinically deployed antifungals19,20.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [19] Bastos, R. W. et al. From the environment to the host: how non-azole agrochemical exposure affects the antifungal susceptibility and virulence of Cryptococcus gattii. Sci. Total Environ. 681, 516–523 (2019). source
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- cites [20] Bastos, R. W. et al. Environmental triazole induces cross-resistance to clinical drugs and affects morphophysiology and virulence of Cryptococcus gattii and C. neoformans. Antimicrob. Agents Chemother. 62, e01179-17 (2018). source
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- Findingcitation
Disomy of chromosome 1, which contains ERG11 and the predominant efflux pump gene AFR1, is the most common aneuploidy conferring azole heteroresistance.
“most commonly involving disomy of chromosome 1, which contains ERG11 and the predominant efflux pump gene AFR1 (ref.17).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [17] Sionov, E., Lee, H., Chang, Y. C. & Kwon-Chung, K. J. Cryptococcus neoformans overcomes stress of azole drugs by formation of disomy in specific multiple chromosomes. PLoS Pathog. 6, e1000848 (2010). source
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- Findingcitation
Heteroresistance was first described in 1999, when researchers observed that a subset of Cryptococcus cells were able to grow at azole concentrations well above the inhibitory concentration in vitro.
“This phenomenon was first described in 1999, when researchers observed that a subset of Cryptococcus cells were able to grow at azole concentrations well above the inhibitory concentration in vitro21.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [21] Mondon, P. et al. Heteroresistance to fluconazole and voriconazole in Cryptococcus neoformans. Antimicrob. Agents Chemother. 43, 1856–1861 (1999). source
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- Findingcitation
Hypermutator phenotypes can also result from mutations in other genes, such as MSL1 and PMS1.
“However, hypermutator phenotypes can also result from mutations in other genes, such as MSL1 and PMS1 (ref.30).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [30] Boyce, K. J. et al. Mismatch repair of DNA replication errors contributes to microevolution in the pathogenic fungus Cryptococcus neoformans. mBio 8, e00595-17 (2017). This report is one of the first of a hypermutator strain in clinical isolates, which has a fitness advantage owing to mutations in mismatch repair genes. source
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- Findingcitation
Disomy of chromosome 4 is the second most common aneuploidy conferring azole heteroresistance, largely attributed to SEY1, GLO3 and GCS2.
“Disomy of chromosome 4 is the second most common aneuploidy conferring azole heteroresistance, which is largely attributed to three genes: SEY1, which encodes a GTPase, and GLO3 and GCS2, which encode ADP-ribosylation factor proteins25.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [25] Ngamskulrungroj, P. et al. Characterization of the chromosome 4 genes that affect fluconazole-induced disomy formation in Cryptococcus neoformans. PLoS ONE 7, e33022 (2012).
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- Findingcitation
Heteroresistance primarily occurs through the formation of aneuploid cells, both in vitro and in vivo.
“Heteroresistance primarily occurs through the formation of aneuploid cells, both in vitro and in vivo17,22,24 (Fig. 1)”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [17] Sionov, E., Lee, H., Chang, Y. C. & Kwon-Chung, K. J. Cryptococcus neoformans overcomes stress of azole drugs by formation of disomy in specific multiple chromosomes. PLoS Pathog. 6, e1000848 (2010). source
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- cites [22] Stone, N. R. et al. Dynamic ploidy changes drive fluconazole resistance in human cryptococcal meningitis. J. Clin. Invest. 129, 999–1014 (2019). This paper presents the first clinical samples to demonstrate fluconazole heteroresistance due to aneuploidy, achieved through increased efflux levels. source
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- cites [24] Sionov, E., Chang, Y. C. & Kwon-Chung, K. J. Azole heteroresistance in Cryptococcus neoformans: emergence of resistant clones with chromosomal disomy in the mouse brain during fluconazole treatment. Antimicrob. Agents Chemother. 57, 5127–5130 (2013). source
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- Findingcitation
A phase II trial demonstrated that a single high dose of LAmB is of equivalent efficacy to a 7-day course of DAmB.
“a phase II trial demonstrated that a single high dose of LAmB is of equivalent efficacy to a 7-day course of DAmB10”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [10] Jarvis, J. N. et al. Short-course high-dose liposomal amphotericin B for human immunodeficiency virus-associated cryptococcal meningitis: a phase 2 randomized controlled trial. Clin. Infect. Dis. 68, 393–401 (2019). source
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- Findingcitation
These transposable elements also mediated resistance to rapamycin, FK506 and flucytosine.
“Furthermore, these transposable elements also mediated resistance to rapamycin, FK506 and flucytosine38.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [38] Gusa, A. et al. Transposon mobilization in the human fungal pathogen Cryptococcus is mutagenic during infection and promotes drug resistance in vitro. Proc. Natl Acad. Sci. USA 117, 9973–9980 (2020). This paper is the first description of transposon-mediated antifungal resistance in Cryptococcus spp. source
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- Findingcitation
Transposon-mediated resistance in C. neoformans was mediated by inactivation of Ura3 and Ura5 by movement of the DNA transposon T1 and the retrotransposon TCN12.
“Resistance was mediated by inactivation of the genes encoding the targets of 5-fluoroorotic acid, Ura3 and Ura5, by the movement of the DNA transposon T1 and the retrotransposon TCN12 within the fungal genome38.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [38] Gusa, A. et al. Transposon mobilization in the human fungal pathogen Cryptococcus is mutagenic during infection and promotes drug resistance in vitro. Proc. Natl Acad. Sci. USA 117, 9973–9980 (2020). This paper is the first description of transposon-mediated antifungal resistance in Cryptococcus spp. source
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- Findingcitation
Hypermutator isolates derived from both the clinic and the laboratory lead to the rapid emergence of resistance to drugs such as rapamycin, FK506, flucytosine, fluconazole and even amphotericin B.
“hypermutator isolates derived from both the clinic and the laboratory lead to the rapid emergence of resistance to drugs such as rapamycin, FK506 (ref.33), flucytosine32, fluconazole and even amphotericin B30.”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [30] Boyce, K. J. et al. Mismatch repair of DNA replication errors contributes to microevolution in the pathogenic fungus Cryptococcus neoformans. mBio 8, e00595-17 (2017). This report is one of the first of a hypermutator strain in clinical isolates, which has a fitness advantage owing to mutations in mismatch repair genes. source
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- cites [32] Billmyre, R. B., Applen Clancey, S., Li, L. X., Doering, T. L. & Heitman, J. 5-Fluorocytosine resistance is associated with hypermutation and alterations in capsule biosynthesis in Cryptococcus. Nat. Commun. 11, 127 (2020). source
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- cites [33] Billmyre, R. B., Clancey, S. A. & Heitman, J. Natural mismatch repair mutations mediate phenotypic diversity and drug resistance in Cryptococcus deuterogattii. eLife 6, e28802 (2017). source
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- Findingcitation
The drug resistance attribute of titan cells is retained in their progeny.
“An important contribution of the titan cell to drug resistance is that this attribute is retained in its progeny26.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [26] Gerstein, A. C. et al. Polyploid titan cells produce haploid and aneuploid progeny to promote stress adaptation. mBio 6, e01340-15 (2015). source
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- Findingcitation
Hypermutator strains have a 15% higher rate of resistance to flucytosine in C. gattii when compared with isolates that do not possess a hypermutator mutation.
“hypermutator strains have a 15% higher rate of resistance to this prodrug (the active drug is fluorouracil) when compared with isolates that do not possess a hypermutator mutation.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [32] Billmyre, R. B., Applen Clancey, S., Li, L. X., Doering, T. L. & Heitman, J. 5-Fluorocytosine resistance is associated with hypermutation and alterations in capsule biosynthesis in Cryptococcus. Nat. Commun. 11, 127 (2020). source
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- Findingcitation
Caspofungin treatment of a cdc50Δ mutant resulted in heightened intracellular calcium and hyperactivation of calcineurin-dependent stress responses.
“caspofungin treatment of a cdc50Δ mutant resulted in heightened intracellular calcium and hyperactivation of calcineurin-dependent stress responses47.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [47] Cao, C., Wang, Y., Husain, S., Soteropoulos, P. & Xue, C. A mechanosensitive channel governs lipid flippase-mediated echinocandin resistance in Cryptococcus neoformans. mBio 10, e01952-19 (2019).
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- Findingcitation
Under fluconazole-induced stress conditions, titan daughter cells are more often aneuploid, specifically with disomy of chromosomes 1 or 4, which results in improved growth in the presence of fluconazole.
“under fluconazole-induced stress conditions they are more often aneuploid, specifically with a disomy of chromosomes 1 or 4, which results in improved growth in the presence of fluconazole26.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [26] Gerstein, A. C. et al. Polyploid titan cells produce haploid and aneuploid progeny to promote stress adaptation. mBio 6, e01340-15 (2015). source
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- Findingcitation
A 2020 report linked transposons to drug resistance in C. neoformans.
“a 2020 report linked transposons to drug resistance in C. neoformans38.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [38] Gusa, A. et al. Transposon mobilization in the human fungal pathogen Cryptococcus is mutagenic during infection and promotes drug resistance in vitro. Proc. Natl Acad. Sci. USA 117, 9973–9980 (2020). This paper is the first description of transposon-mediated antifungal resistance in Cryptococcus spp. source
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- Findingcitation
A forward genetic screen revealed that inactivation of the calcium channel protein Crm1 reduced intracellular calcium, normalized calcineurin signalling and reinstated caspofungin resistance in a cdc50Δ background.
“A forward genetic screen to identify suppressor mutations that restore caspofungin resistance in a cdc50Δ background revealed that inactivation of the calcium channel protein Crm1 reduced intracellular calcium, normalized calcineurin signalling and reinstated caspofungin resistance47.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [47] Cao, C., Wang, Y., Husain, S., Soteropoulos, P. & Xue, C. A mechanosensitive channel governs lipid flippase-mediated echinocandin resistance in Cryptococcus neoformans. mBio 10, e01952-19 (2019).
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- Findingcitation
The thicker cell walls of older C. neoformans cells have been implicated in their increased antifungal resistance.
“the thicker cell walls of older C. neoformans cells have been implicated in their increased antifungal resistance42.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [42] Bouklas, T. et al. Old Cryptococcus neoformans cells contribute to virulence in chronic cryptococcosis. mBio 4, e00455-13 (2013). source
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- Findingcitation
During cryptococcal infection of mouse lungs, ~20% of fungal cells transform from haploid yeast into polyploid titan cells.
“During cryptococcal infection of mouse lungs, ~20% of fungal cells transform from haploid yeast into polyploid titan cells29,147, making up a substantial subset of the population.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [29] Okagaki, L. H. et al. Cryptococcal cell morphology affects host cell interactions and pathogenicity. PLoS Pathog. 6, e1000953 (2010). source
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- cites [147] Zaragoza, O. et al. Fungal cell gigantism during mammalian infection. PLoS Pathog. 6, e1000945 (2010). source
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- Findingcitation
The enhanced flucytosine resistance in hypermutator strains was caused by loss-of-function mutations in Fcy2 and Fur1, and a mutation in Uxs1.
“This enhanced resistance was caused by loss-of-function mutations in the genes encoding the purine-cytosine permease Fcy2 and the uracil phosphoribosyltransferase Fur1, which import and process the prodrug, respectively, as well as a mutation in the gene encoding Uxs1, which produces UDP-xylose, a precursor in capsule biosynthesis32.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [32] Billmyre, R. B., Applen Clancey, S., Li, L. X., Doering, T. L. & Heitman, J. 5-Fluorocytosine resistance is associated with hypermutation and alterations in capsule biosynthesis in Cryptococcus. Nat. Commun. 11, 127 (2020). source
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- Findingcitation
Titan cell populations have an increased growth advantage compared with typical haploid cells on exposure to oxidative and nitrosative stress, which is not mediated through aneuploid formation.
“titan cell populations also have an increased growth advantage compared with typical haploid cells on exposure to oxidative and nitrosative stress, which is not mediated through aneuploid formation26”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [26] Gerstein, A. C. et al. Polyploid titan cells produce haploid and aneuploid progeny to promote stress adaptation. mBio 6, e01340-15 (2015). source
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- Premisecitation
The echinocandins display negligible antifungal activity against Cryptococcus spp.
“the only new class of antifungal drugs developed in decades, the echinocandins, displays negligible antifungal activity against Cryptococcus spp.”
- Also stated in: § Treatments for cryptococcal infections · plain
“Cryptococcus spp. are intrinsically resistant to echinocandins”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [2] Lee, Y., Puumala, E., Robbins, N. & Cowen, L. E. Antifungal drug resistance: molecular mechanisms in Candida albicans and beyond. Chem. Rev. https://doi.org/10.1021/acs.chemrev.0c00199 (2020). source
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- cites [8] Denning, D. W. Echinocandin antifungal drugs. Lancet 362, 1142–1151 (2003). source
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- Also stated in: § Treatments for cryptococcal infections · plain
- Premisenone given
The efficacy of the remaining cryptococcal therapeutics is hampered by host toxicity and pathogen resistance.
“the efficacy of the remaining therapeutics is hampered by host toxicity and pathogen resistance”
Quote in the paperSubstantial claim - Premisecitation
The majority of cryptococcal meningitis deaths are reported from resource-limited countries owing to a lack of access to drugs and the high cost of effective treatments.
“The majority of deaths are reported from resource-limited countries owing to a lack of access to drugs and the high cost of effective treatments, signifying the urgency in developing affordable therapeutics against these deadly fungal pathogens7.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [7] Loyse, A. et al. Leave no one behind: response to new evidence and guidelines for the management of cryptococcal meningitis in low-income and middle-income countries. Lancet Infect. Dis. 19, e143–e147 (2019). source
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- Premisenone given
Cryptococcus spp. display extraordinary genomic plasticity and physiological adaptability, which allows resilience to antifungal assault.
“Cryptococcus spp. display extraordinary genomic plasticity and physiological adaptability, which allows resilience to antifungal assault (Fig. 1).”
Quote in the paperSubstantial claim - Premisecitation
Current antifungal drug treatments for invasive fungal infections are limited to polyenes, azoles and echinocandins.
“current antifungal drug treatments for invasive fungal infections are limited to polyenes, azoles and echinocandins2”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [2] Lee, Y., Puumala, E., Robbins, N. & Cowen, L. E. Antifungal drug resistance: molecular mechanisms in Candida albicans and beyond. Chem. Rev. https://doi.org/10.1021/acs.chemrev.0c00199 (2020). source
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- Premisecitation
Widespread antifungal use has fuelled the rapid emergence of drug resistance to all three classes of antifungal agents.
“Unfortunately, widespread antifungal use has fuelled the rapid emergence of drug resistance to all three classes of antifungal agents3.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [3] Fisher, M. C., Hawkins, N. J., Sanglard, D. & Gurr, S. J. Worldwide emergence of resistance to antifungal drugs challenges human health and food security. Science 360, 739–742 (2018). This important review highlights the impact that drug-resistant fungal species have on human health. source
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- Premisecitation
Liposome bilayer-coated amphotericin B (LAmB) reduces toxicity while retaining antifungal activity, mitigating the dosage limitation of conventional amphotericin B deoxycholate (DAmB).
“Liposome bilayer-coated amphotericin B (LAmB) has been developed to reduce toxicity while retaining antifungal activity, mitigating the dosage limitation of conventional amphotericin B deoxycholate (DAmB)9.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [9] Stone, N. R., Bicanic, T., Salim, R. & Hope, W. Liposomal amphotericin B (AmBisome®): a review of the pharmacokinetics, pharmacodynamics, clinical experience and future directions. Drugs 76, 485–500 (2016). source
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- Interpretationcitation
Research suggests that either mis-segregation of chromosomes or compromised nuclear division leads to the formation of aneuploid cells under azole stress.
“research suggests that either mis-segregation of chromosomes or compromised nuclear division leads to the formation of aneuploid cells under azole stress27–29.”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [27] Altamirano, S. et al. Fluconazole-induced ploidy change in Cryptococcus neoformans results from the uncoupling of cell growth and nuclear division. mSphere 2, e00205–e00217 (2017). source
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- cites [28] Chang, Y. C., Khanal Lamichhane, A. & Kwon-Chung, K. J. Cryptococcus neoformans, unlike Candida albicans, forms aneuploid clones directly from uninucleated cells under fluconazole stress. mBio 9, e01290-18 (2018).
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- cites [29] Okagaki, L. H. et al. Cryptococcal cell morphology affects host cell interactions and pathogenicity. PLoS Pathog. 6, e1000953 (2010). source
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- Premisecitation
Changes in the Cryptococcus capsule and cell wall contribute to resistance and virulence.
“Changes in the Cryptococcus capsule and cell wall contribute to resistance and virulence.”
Quote in the paperSubstantial claim - Interpretationcitation
It was postulated that echinocandin resistance in Cryptococcus is mediated by calcineurin signalling via Crm1, which is overstimulated as a result of CDC50 deletion, thereby triggering cell death.
“Therefore, it was postulated that echinocandin resistance in Cryptococcus is mediated by calcineurin signalling (via Crm1), which is overstimulated as a result of CDC50 deletion, thereby triggering cell death47.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [47] Cao, C., Wang, Y., Husain, S., Soteropoulos, P. & Xue, C. A mechanosensitive channel governs lipid flippase-mediated echinocandin resistance in Cryptococcus neoformans. mBio 10, e01952-19 (2019).
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- Interpretationcitation
The titan cell plays a key part in stress adaptation and resistance to antifungal drugs.
“The titan cell also plays a key part in stress adaptation and resistance to antifungal drugs26,150.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [26] Gerstein, A. C. et al. Polyploid titan cells produce haploid and aneuploid progeny to promote stress adaptation. mBio 6, e01340-15 (2015). source
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- cites [150] Okagaki, L. H. et al. Cryptococcal titan cell formation is regulated by G-protein signaling in response to multiple stimuli. Eukaryot. Cell 10, 1306–1316 (2011). source
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- Premisecitation
The inherent resistance of Cryptococcus spp. to echinocandins is a key limitation in the treatment of cryptococcosis.
“The inherent resistance of Cryptococcus spp. to echinocandins is a key limitation in the treatment of cryptococcosis8.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [8] Denning, D. W. Echinocandin antifungal drugs. Lancet 362, 1142–1151 (2003). source
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- Interpretationcitation
Titan cells exhibit numerous alterations that likely contribute to drug resistance.
“the formation of Cryptococcus titan cells, which exhibit numerous alterations that likely contribute to drug resistance43 (Box 2).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [43] Zafar, H., Altamirano, S., Ballou, E. R. & Nielsen, K. A titanic drug resistance threat in Cryptococcus neoformans. Curr. Opin. Microbiol. 52, 158–164 (2019). This seminal review summarizes the current understanding of the mechanisms underlying antifungal resistance of the Cryptococcus titan cell. source
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- Premisecitation
The resistance of Cryptococcus to echinocandins is paradoxical because β-1,3-glucan synthase, the enzymatic target of echinocandins, is essential in Cryptococcus and has been demonstrated to be potently inhibited by echinocandins biochemically.
“This resistance is paradoxical, as β-1,3-glucan synthase, the enzymatic target of the echinocandins, is essential in Cryptococcus and has been demonstrated to be potently inhibited by echinocandins biochemically44,45.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [44] Thompson, J. R. et al. A glucan synthase FKS1 homolog in Cryptococcus neoformans is single copy and encodes an essential function. J. Bacteriol. 181, 444–453 (1999). source
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- cites [45] Maligie, M. A. & Selitrennikoff, C. P. Cryptococcus neoformans resistance to echinocandins: (1,3)β-glucan synthase activity is sensitive to echinocandins. Antimicrob. Agents Chemother. 49, 2851–2856 (2005). source
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- Interpretationcitation
These data highlight a pivotal role of stress responses in mediating echinocandin resistance, exemplified by the identification of 14 caspofungin-sensitive C. neoformans mutants that are defective in the activation of stress responses, including calcineurin-dependent responses.
“These data highlight a pivotal role of stress responses in mediating echinocandin resistance, which is exemplified by the identification of 14 caspofungin-sensitive C. neoformans mutants that are defective in the activation of stress responses, including calcineurin-dependent responses48.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [48] Pianalto, K. M., Billmyre, R. B., Telzrow, C. L. & Alspaugh, J. A. Roles for stress response and cell wall biosynthesis pathways in caspofungin tolerance in Cryptococcus neoformans. Genetics 213, 213–227 (2019). source
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- Premisecitation
The crystal structure of the two subunits of calcineurin in a complex with FK506 and FKBP12 from four prominent fungal pathogens, including C. neoformans, has been solved.
“Fortunately, the crystal structure of the two subunits of calcineurin in a complex with the inhibitor FK506 and the FK506-binding protein FKBP12 from four prominent fungal pathogens, including C. neoformans, has been solved.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [77] Juvvadi, P. R. et al. Harnessing calcineurin–FK506–FKBP12 crystal structures from invasive fungal pathogens to develop antifungal agents. Nat. Commun. 10, 4275 (2019). This paper presents an excellent example of successful structure-guided drug design to develop fungal-specific calcineurin inhibitors. source
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- Interpretationreasoning
The machinery responsible for capsule biosynthesis and structure, such as the xylosyltransferase Cxt1 and the lactonohydrolase Lhc1, represents ideal anti-virulence targets.
“Therefore, the machinery responsible for capsule biosynthesis and structure, such as the xylosyltransferase Cxt1 (ref.57) and the lactonohydrolase Lhc1 (ref.41), represent ideal anti-virulence targets.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites ref.57
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- cites ref.41
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- Rests on an assumption: Virulence factors are not required for the growth of the pathogen but are crucial for causing disease.
- Premisecitation
Deletion of cell wall-related genes has pleiotropic effects, including reduced virulence.
“Thus, many researchers have investigated the function of cell wall-related genes, finding that deletion of these genes has pleiotropic effects, including reduced virulence.”
Quote in the paperSubstantial claim - Premisecitation
Other fungal-selective calcineurin inhibitors have been obtained by screening FK506 analogues to identify compounds that synergize with fluconazole to clear fungal infections in mice.
“Other fungal-selective calcineurin inhibitors have been obtained by screening FK506 analogues to identify compounds that synergize with fluconazole to clear fungal infections in mice78.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [78] Lee, Y. et al. In vitro and in vivo asssessment of FK506 analogs as novel antifungal drug candidates. Antimicrob. Agents Chemother. 62, e01627-18 (2018).
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- Premisecitation
Lhc1 modulates immune responses, blocking phagocytosis of C. neoformans by macrophage-like cell lines in vitro.
“Furthermore, Lhc1 modulates immune responses, blocking phagocytosis of C. neoformans by macrophage-like cell lines in vitro41.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [41] Park, Y. D. et al. A role for LHC1 in higher order structure and complement binding of the Cryptococcus neoformans capsule. PLoS Pathog. 10, e1004037 (2014).
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- Premisecitation
Calcineurin is essential for diverse drug-resistance and virulence phenotypes in pathogenic fungi.
“For example, the protein phosphatase calcineurin is essential for diverse drug-resistance and virulence phenotypes in pathogenic fungi76.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [76] Juvvadi, P. R., Lamoth, F. & Steinbach, W. J. Calcineurin as a multifunctional regulator: unraveling novel functions in fungal stress responses, hyphal growth, drug resistance, and pathogenesis. Fungal Biol. Rev. 28, 56–69 (2014). source
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- Premisecitation
A genome-wide association study of C. neoformans isolates found sequence differences between clinical and environmental isolates in genes involved in virulence and stress responses, including CCK2.
“A genome-wide association study of C. neoformans isolates found sequence differences between clinical and environmental isolates in genes involved in virulence and stress responses, including CCK2 (encoding a casein kinase)74.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [74] Desjardins, C. A. et al. Population genomics and the evolution of virulence in the fungal pathogen Cryptococcus neoformans. Genome Res. 27, 1207–1219 (2017). source
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- Premisecitation
The structures identified a specific residue conserved in fungal FKBP12 but not human FKBP12 that is crucial for FK506-mediated inhibition of calcineurin.
“These structures identified a specific residue that is conserved in the fungal FKBP12 but not the human FKBP12 and is crucial for FK506-mediated inhibition of calcineurin77”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [77] Juvvadi, P. R. et al. Harnessing calcineurin–FK506–FKBP12 crystal structures from invasive fungal pathogens to develop antifungal agents. Nat. Commun. 10, 4275 (2019). This paper presents an excellent example of successful structure-guided drug design to develop fungal-specific calcineurin inhibitors. source
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- Premisecitation
Comparative analysis of isolates collected over the course of an infection revealed that later-stage isolates possessed enhanced thermotolerance, capsule production and stress adaptation compared with earlier-stage isolates.
“Additionally, comparative analysis of a series of isolates collected over the course of an infection revealed that later-stage isolates possessed enhanced thermotolerance, capsule production and stress adaptation compared with earlier-stage isolates75.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [75] Chen, Y. et al. Microevolution of serial clinical isolates of Cryptococcus neoformans var. grubii and C. gattii. mBio 8, e00166-17 (2017).
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- Interpretationreasoning
Small molecules have therapeutic potential to impair Cryptococcus spp. capsule formation.
“thus demonstrating the therapeutic potential of using small molecules to impair Cryptococcus spp. capsule formation.”
Quote in the paperSubstantial claim - Premisecitation
The macrolides clarithromycin and azithromycin, as well as thiazole derivatives, disrupt the integrity and reduce the thickness of the capsule, resulting in enhanced phagocytosis of Cryptococcus by murine macrophages.
“Finally, the macrolides clarithromycin and azithromycin, as well as thiazole derivatives, disrupt the integrity and reduce the thickness of the capsule, resulting in enhanced phagocytosis of Cryptococcus by murine macrophages59,60”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [59] Nakamura, S. et al. Macrolides inhibit capsule formation of highly virulent Cryptococcus gattii and promote innate immune susceptibility. Antimicrob. Agents Chemother. 63, e02364-18 (2019).
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- cites [60] de Sa, N. P. et al. Thiazole derivatives act on virulence factors of Cryptococcus spp. Med. Mycol. 57, 84–91 (2019). source
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- Premisecitation
Current calcineurin inhibitors such as FK506 are immunosuppressive through inhibition of host calcineurin.
“However, as current calcineurin inhibitors such as FK506 are immunosuppressive (through inhibition of host calcineurin), fungal-selective calcineurin inhibitors are needed76.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [76] Juvvadi, P. R., Lamoth, F. & Steinbach, W. J. Calcineurin as a multifunctional regulator: unraveling novel functions in fungal stress responses, hyphal growth, drug resistance, and pathogenesis. Fungal Biol. Rev. 28, 56–69 (2014). source
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- Premisecitation
PLB1 mutants display attenuated virulence in mice owing to impaired titan cell formation, proliferation and survival within macrophages.
“PLB1 mutants display attenuated virulence in mice owing to impaired titan cell formation, proliferation and survival within macrophages71.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [71] Evans, R. J. et al. Cryptococcal phospholipase B1 is required for intracellular proliferation and control of titan cell morphology during macrophage infection. Infect. Immun. 83, 1296–1304 (2015). source
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- Premisecitation
Laccase-deficient mutants display attenuated pulmonary dissemination in vivo.
“and laccase-deficient mutants display attenuated pulmonary dissemination in vivo67.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [67] Noverr, M. C., Williamson, P. R., Fajardo, R. S. & Huffnagle, G. B. CNLAC1 is required for extrapulmonary dissemination of Cryptococcus neoformans but not pulmonary persistence. Infect. Immun. 72, 1693–1699 (2004). source
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- Premisecitation
TOR is a highly conserved master regulator of various cellular processes, including ribosome biogenesis, metabolic pathways and stress responses.
“Additional studies have explored the potential of inhibiting TOR signalling for antifungal drug development, as TOR is a highly conserved master regulator of various cellular processes, including ribosome biogenesis, metabolic pathways and stress responses83.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [83] Bahn, Y. S. & Jung, K. W. Stress signaling pathways for the pathogenicity of Cryptococcus. Eukaryot. Cell 12, 1564–1577 (2013). source
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- Premisecitation
Extracellular enzymes such as lipases, proteases and DNases are secreted by Cryptococcus cells to damage host tissue, promote virulence and interfere with the immune response.
“During infection, extracellular enzymes (such as lipases, proteases and DNases) are secreted by Cryptococcus cells to damage host tissue, promote virulence and interfere with the immune response58.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [58] Almeida, F., Wolf, J. M. & Casadevall, A. Virulence-associated enzymes of Cryptococcus neoformans. Eukaryot. Cell 14, 1173–1185 (2015). source
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- Premisecitation
Flucytosine inhibits pigmentation in a DNA polymerase β-dependent manner.
“A screen of compounds that specifically inhibit melanization found a new role for the pyrimidine analogue flucytosine in inhibiting pigmentation in a DNA polymerase β-dependent manner68.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [68] Zimbres, A. C. G. et al. Pharmacological inhibition of pigmentation in Cryptococcus. FEMS Yeast Res. 19, foy119 (2019).
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- Premisecitation
Genes involved in β-1,6-glucan synthesis, melanin production, chitin synthesis and chitosan synthesis are cell wall-related genes whose deletion reduces virulence.
“This includes genes involved in the synthesis of β-1,6-glucan (such as KRE5, KRE6 and SKN1)61, the protective pigment melanin (such as the laccase gene LAC1)62, chitin in the cell wall (including the chitin synthase gene CHS3 and the regulator protein gene CSR2)63 and chitosan (exemplified by the chitin deacetylase genes CDA1, CDA2 and CDA3)64,65.”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [61] Gilbert, N. M. et al. KRE genes are required for β-1,6-glucan synthesis, maintenance of capsule architecture and cell wall protein anchoring in Cryptococcus neoformans. Mol. Microbiol. 76, 517–534 (2010). source
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- cites [62] Zhu, X., Gibbons, J., Garcia-Rivera, J., Casadevall, A. & Williamson, P. R. Laccase of Cryptococcus neoformans is a cell wall-associated virulence factor. Infect. Immun. 69, 5589–5596 (2001). source
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- cites [63] Banks, I. R. et al. A chitin synthase and its regulator protein are critical for chitosan production and growth of the fungal pathogen Cryptococcus neoformans. Eukaryot. Cell 4, 1902–1912 (2005). source
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- Premisecitation
Mefloquine derivatives displayed a marginal increase in in vitro toxicity against human cells compared with mefloquine.
“Unfortunately, these derivatives also displayed a marginal increase in their in vitro toxicity against human cells compared with mefloquine104.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [104] Montoya, M. C., Beattie, S., Alden, K. M. & Krysan, D. J. Derivatives of the antimalarial drug mefloquine are broad-spectrum antifungal molecules with activity against drug-resistant clinical isolates. Antimicrob. Agents Chemother. 64, e02331-19 (2020). source
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- Premisecitation
APX001, alone or in combination with fluconazole, significantly decreased the fungal burden in both the lungs and the brain in a mouse model of cryptococcal infection.
“APX001, alone or in combination with fluconazole, significantly decreased the fungal burden in both the lungs and the brain in a mouse model of cryptococcal infection98.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [98] Rittershaus, P. C. et al. Glucosylceramide synthase is an essential regulator of pathogenicity of Cryptococcus neoformans. J. Clin. Invest. 116, 1651–1659 (2006). source
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- Premisecitation
A phase II trial found no therapeutic benefit of tamoxifen (300 mg daily) as an adjunct to standard amphotericin B and fluconazole for cryptococcal meningitis compared with standard therapy alone.
“A phase II clinical trial to assess the efficacy and safety of tamoxifen (300 mg daily) as an adjunct therapy to the standard therapy of amphotericin B and fluconazole for the treatment of cryptococcal meningitis (NCT03112031) has completed109; however, this trial found no therapeutic benefit of this combination compared with the standard therapy alone110.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [109] Ngan, N. T. T. et al. A randomized open label trial of tamoxifen combined with amphotericin B and fluconazole for cryptococcal meningitis. Wellcome Open Res. 4, 8 (2019). source
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- cites [110] Day, J. Best options in cryptococcosis. 29th ECCMID https://www.escmid.org/escmid_publications/escmid_elibrary/material/?mid=70711 (2019).
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- Premisecitation
Sertraline treatment alone or in combination with amphotericin B and fluconazole did not improve patient outcomes in a phase III trial in individuals treated for cryptococcal meningitis.
“Unfortunately, despite promising results in phase I/II clinical trials, sertraline treatment alone or in combination with amphotericin B and fluconazole did not improve patient outcomes in a phase III trial with individuals being treated for cryptococcal meningits108.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [108] Rhein, J. et al. Efficacy of adjunctive sertraline for the treatment of HIV-associated cryptococcal meningitis: an open-label dose-ranging study. Lancet Infect. Dis. 16, 809–818 (2016). source
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- Premisecitation
Alternative high-throughput screening platforms that specifically identify fungicidal molecules have been developed.
“In addition to employing non-traditional compound libraries for the discovery of novel antifungals, alternative high-throughput screening platforms that specifically identify fungicidal molecules have been developed91,92.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [91] Hartland, K. et al. High-throughput screen in Cryptococcus neoformans identifies a novel molecular scaffold that inhibits cell wall integrity pathway signaling. ACS Infect. Dis. 2, 93–102 (2016). source
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- cites [92] Rabjohns, J. L. A. et al. A high-throughput screening assay for fungicidal compounds against Cryptococcus neoformans. J. Biomol. Screen. 19, 270–277 (2014). source
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- Interpretationcitation
Sphingolipid biosynthesis is an attractive target given the function of these lipids in mediating signal transduction, cell regulation and virulence in fungal pathogens.
“Finally, biosynthesis of sphingolipids is emerging as an attractive target given the function of these lipids in mediating signal transduction, cell regulation and virulence in fungal pathogens99.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [99] Singh, A. et al. Methylation of glycosylated sphingolipid modulates membrane lipid topography and pathogenicity of Cryptococcus neoformans. Cell Microbiol. 14, 500–516 (2012). source
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- Premisecitation
Evidence exists for divergence in regulation of TOR signalling in C. neoformans and other fungi.
“However, evidence exists for divergence in regulation of TOR signalling in C. neoformans and other fungi85, which would have important implications for the development of a broad-spectrum antifungal therapeutic.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [85] So, Y. S., Lee, D. G., Idnurm, A., Ianiri, G. & Bahn, Y. S. The TOR pathway pays pleiotropic roles in growth and stress responses of the fungal pathogen Cryptococcus neoformans. Genetics 212, 1241–1258 (2019). source
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- Premisecitation
VT-1598 is a rationally designed Erg11 inhibitor that has increased fungal selectivity compared with other approved Erg11 inhibitors, including fluconazole.
“The tetrazole VT-1598 is a rationally designed Erg11 inhibitor that has increased fungal selectivity compared with other approved Erg11 inhibitors, including fluconazole101”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [101] Garvey, E. P., Sharp, A. D., Warn, P. A., Yates, C. M. & Schotzinger, R. J. The novel fungal CYP51 inhibitor VT-1598 is efficacious alone and in combination with liposomal amphotericin B in a murine model of cryptococcal meningitis. J. Antimicrob. Chemother. 73, 2815–2822 (2018). source
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- Premisecitation
Mefloquine has limited activity against C. albicans and C. neoformans.
“For example, the antimalarial compound mefloquine has limited activity against C. albicans and C. neoformans104”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [104] Montoya, M. C., Beattie, S., Alden, K. M. & Krysan, D. J. Derivatives of the antimalarial drug mefloquine are broad-spectrum antifungal molecules with activity against drug-resistant clinical isolates. Antimicrob. Agents Chemother. 64, e02331-19 (2020). source
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- Premisecitation
The Gwt1 inhibitor APX001 has demonstrated in vitro and in vivo efficacy against Cryptococcus spp.
“The Gwt1 inhibitor APX001 has demonstrated in vitro and in vivo efficacy against Cryptococcus spp.97”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [97] Shaw, K. J. et al. In vitro and in vivo evaluation of APX001A/APX001 and other Gwt1 inhibitors against Cryptococcus. Antimicrob. Agents Chemother. 62, e00523-18 (2018).
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- Premisecitation
A screen with the Prestwick Chemical Library of 1,120 off-patent drugs and molecules identified 31 molecules with fungilytic activity.
“For example, a screen with the Prestwick Chemical Library of 1,120 off-patent drugs and molecules identified 31 molecules with fungilytic activity111.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [111] Butts, A. et al. A repurposing approach identifies off-patent drugs with fungicidal cryptococcal activity, a common structural chemotype, and pharmacological properties relevant to the treatment of cryptococcosis. Eukaryot. Cell 12, 278–287 (2013). source
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- Premisecitation
BTUs are direct inhibitors of the Sec4-class small GTPase Sav1, leading to impaired function of the late post-Golgi secretory pathway.
“Specifically, BTUs were implicated as direct inhibitors of the Sec4-class small GTPase Sav1, leading to impaired function of the late post-Golgi secretory pathway and highlighting a unique way to compromise cell wall integrity and inhibit fungal cell growth95.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [95] Beattie, S. R. et al. Benzothiourea derivatives target the secretory pathway of the human fungal pathogen Cryptococcus neoformans. ACS Infect. Dis. 6, 529–539 (2020). source
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- Premisecitation
The Malaria Box and the Pathogen Box have been screened for molecules with activity against fungal pathogens, including C. neoformans.
“For example, the Malaria Box and the Pathogen Box of Medicines for Malaria Venture, which are collections of diverse molecules that are active against malaria and neglected tropical diseases, have now been screened for molecules with activity against fungal pathogens, including C. neoformans88,89.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [88] Jung, E. H., Meyers, D. J., Bosch, J. & Casadevall, A. Novel antifungal compounds discovered in medicines for Malaria Venture’s Malaria Box. mSphere 3, e00537-17 (2018).
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- cites [89] Mayer, F. L. & Kronstad, J. W. Discovery of a novel antifungal agent in the Pathogen Box. mSphere 2, e00120-17 (2017). source
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- Rests on an assumption: Antifungal molecules need good central nervous system penetration and should be able to be administered orally to ensure widespread access within developing countries with limited resources.
- Premisecitation
Sertraline acts synergistically with fluconazole in a mouse model of systemic cryptococcosis, reducing the fungal burden.
“Originally developed as an antidepressant, sertraline acts synergistically with fluconazole in a mouse model of systemic cryptococcosis, reducing the fungal burden105.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [105] Zhai, B., Wu, C., Wang, L., Sachs, M. S. & Lin, X. The antidepressant sertraline provides a promising therapeutic option for neurotropic cryptococcal infections. Antimicrob. Agents Chemother. 56, 3758–3766 (2012). source
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- Premisecitation
N-substituted benzothioureas (BTUs) are a scaffold capable of inhibiting activation of the cell wall integrity pathway in Cryptococcus spp.
“Through this endeavour, N-substituted benzothioureas (BTUs) were highlighted as a scaffold that is capable of inhibiting activation of the cell wall integrity pathway in Cryptococcus spp.91”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [91] Hartland, K. et al. High-throughput screen in Cryptococcus neoformans identifies a novel molecular scaffold that inhibits cell wall integrity pathway signaling. ACS Infect. Dis. 2, 93–102 (2016). source
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- Premisecitation
BHBM and its derivative B0 are highly effective antifungal agents in multiple mouse models of cryptococcosis.
“A screen of synthetic small molecules that specifically target the synthesis of the fungal sphingolipid glucosylceramide (GluCer) identified two compounds — N′-(3-bromo-4-hydroxybenzylidene)-2-methylbenzohydrazide (BHBM) and its derivative 3-bromo-N′-(3-bromo-4-hydroxybenzylidene)benzohydrazide (B0) — as highly effective antifungal agents in multiple mouse models of cryptococcosis100”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [100] Mor, V. et al. Identification of a new class of antifungals targeting the synthesis of fungal sphingolipids. mBio 6, e00647 (2015). This work identifies a new class of antifungal agents that target sphingolipids in several fungal pathogens and that display fungal-selective activity and synergism with currently used therapies.
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- Premisecitation
Screening a diverse collection of natural product-producing actinomycete strains led to identification of ibomycin as an inhibitor of C. neoformans growth, owing to its ability to permeate the fungal cell wall and affect membrane function by disrupting endosomal trafficking.
“Furthermore, screening a diverse collection of natural product-producing actinomycete strains led to identification of the glycosylated macrolactone ibomycin as an inhibitor of C. neoformans growth, owing to its ability to permeate the fungal cell wall and affect membrane function by disrupting endosomal trafficking90”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [90] Robbins, N. et al. Discovery of ibomycin, a complex macrolactone that exerts antifungal activity by impeding endocytic trafficking and membrane function. Cell Chem. Biol. 23, 1383–1394 (2016). source
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- Premisecitation
A high-throughput approach, termed the overlap2 method, has been developed to predict synergistic and antagonistic drug pairs using at least one known synergistic drug pair and chemical-genetic data sets.
“A high-throughput approach has been developed to predict synergistic and antagonistic drug pairs using at least one known synergistic drug pair and chemical–genetic data sets118,119.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [118] Brown, J. C. S. et al. Unraveling the biology of a fungal meningitis pathogen using chemical genetics. Cell 159, 1168–1187 (2014). This work establishes a chemical–genetic platform providing an approach to explore antifungal activities of novel compounds and predict synergistic antifungal combinations that are effective against Cryptococcus spp. source
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- cites [119] Wambaugh, M. A. et al. Synergistic and antagonistic drug interactions in the treatment of systemic fungal infections. eLife 9, e54160 (2020). source
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- Premisecitation
The combination of dicyclomine HCl and fluconazole displayed enhanced efficacy in a mouse model of cryptococcal meningitis.
“Indeed, the combination of these drugs displayed enhanced efficacy in a mouse model of cryptococcal meningitis119.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [119] Wambaugh, M. A. et al. Synergistic and antagonistic drug interactions in the treatment of systemic fungal infections. eLife 9, e54160 (2020). source
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- Premisecitation
Inhibitors of Hsp90, calcineurin and other stress response regulators show promise in combination with azoles for inhibiting Cryptococcus spp. growth.
“This is illustrated by inhibitors of Hsp90, calcineurin and other stress response regulators, which show promise in combination with azoles for inhibiting Cryptococcus spp. growth76,79,80.”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [76] Juvvadi, P. R., Lamoth, F. & Steinbach, W. J. Calcineurin as a multifunctional regulator: unraveling novel functions in fungal stress responses, hyphal growth, drug resistance, and pathogenesis. Fungal Biol. Rev. 28, 56–69 (2014). source
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- cites [79] Chatterjee, S. & Tatu, U. Heat shock protein 90 localizes to the surface and augments virulence factors of Cryptococcus neoformans. PLoS Negl. Trop. Dis. 11, e0005836 (2017). source
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- cites [80] Cordeiro, R. A. et al. Inhibition of heat-shock protein 90 enhances the susceptibility to antifungals and reduces the virulence of Cryptococcus neoformans/Cryptococcus gattii species complex. Microbiology 162, 309–317 (2016). source
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- Premisecitation
18B7 transiently reduced serum antigen levels at high doses.
“Administration of 18B7 was safe and transiently reduced serum antigen levels at high doses but exhibited poor cerebrospinal fluid penetration132.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [132] Larsen, R. A. et al. Phase I evaluation of the safety and pharmacokinetics of murine-derived anticryptococcal antibody 18B7 in subjects with treated cryptococcal meningitis. Antimicrob. Agents Chemother. 49, 952–958 (2005). source
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- Premisecitation
A monoclonal antibody specific for the C. neoformans polysaccharide capsule was protective against cryptococcal infection in mice.
“In addition to cell-mediated immunity, pioneering work established that a monoclonal antibody specific for the C. neoformans polysaccharide capsule was protective against cryptococcal infection in mice126,127.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [126] Dromer, F., Charreire, J., Contrepois, A., Carbon, C. & Yeni, P. Protection of mice against experimental cryptococcosis by anti-Cryptococcus neoformans monoclonal antibody. Infect. Immun. 55, 749–752 (1987). source
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- cites [127] Dromer, F., Salamero, J., Contrepois, A., Carbon, C. & Yeni, P. Production, characterization, and antibody specificity of a mouse monoclonal antibody reactive with Cryptococcus neoformans capsular polysaccharide. Infect. Immun. 55, 742–748 (1987). This report is the first of a monoclonal antibody that provides protection against experimental cryptococcosis, challenging the long-standing dogma that antibodies are unimportant in anti-cryptococcal immunity. source
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- Premisecitation
This immune response is mediated by production of cytokines including IL-2, IL-12, TNF and IFNγ, which recruit phagocytes that help to clear the infection.
“This immune response is mediated by the production of cytokines, including interleukin-2 (IL-2), IL-12, tumour necrosis factor (TNF) and interferon-γ (IFNγ), which in turn recruit phagocytes that help to clear the infection120,122.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [120] Wozniak, K. L. et al. Insights into the mechanisms of protective immunity against Cryptococcus neoformans infection using a mouse model of pulmonary cryptococcosis. PLoS ONE 4, e6854 (2009). source
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- cites [122] Caballero Van Dyke, M. C. & Wormley, F. L. Jr. A call to arms: quest for a cryptococcal vaccine. Trends Microbiol. 26, 436–446 (2018). source
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- Premisecitation
18B7 behaves as a catalytic antibody capable of hydrolysis of the C. neoformans capsule.
“Furthermore, 18B7 behaves as a catalytic antibody that is capable of hydrolysis of the C. neoformans capsule131.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [131] Bowen, A., Wear, M. P., Cordero, R. J., Oscarson, S. & Casadevall, A. A monoclonal antibody to Cryptococcus neoformans glucuronoxylomannan manifests hydrolytic activity for both peptides and polysaccharides. J. Biol. Chem. 292, 417–434 (2017). source
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- Premisecitation
A strong IFNγ response is indicative of a good prognosis in patients with cryptococcosis.
“A strong IFNγ response is indicative of a good prognosis in patients with cryptococcosis123,124.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [123] Jarvis, J. N. et al. Determinants of mortality in a combined cohort of 501 patients with HIV-associated cryptococcal meningitis: implications for improving outcomes. Clin. Infect. Dis. 58, 736–745 (2014). source
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- cites [124] Jarvis, J. N. et al. Adjunctive interferon-γ immunotherapy for the treatment of HIV-associated cryptococcal meningitis: a randomized controlled trial. AIDS 26, 1105–1113 (2012). source
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- Premisecitation
18B7 exhibited poor cerebrospinal fluid penetration.
“Administration of 18B7 was safe and transiently reduced serum antigen levels at high doses but exhibited poor cerebrospinal fluid penetration132.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [132] Larsen, R. A. et al. Phase I evaluation of the safety and pharmacokinetics of murine-derived anticryptococcal antibody 18B7 in subjects with treated cryptococcal meningitis. Antimicrob. Agents Chemother. 49, 952–958 (2005). source
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- Premisecitation
Addition of adjuvant IFNγ to the standard of care enhanced fungal clearance from the cerebrospinal fluid with no reported increase in adverse effects in two phase II clinical trials.
“Two phase II clinical trials investigated the safety and efficacy of administering exogenous, recombinant IFNγ as a cryptococcal therapy and found that addition of adjuvant IFNγ to the standard of care enhanced fungal clearance from the cerebrospinal fluid with no reported increase in adverse effects124,125.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [124] Jarvis, J. N. et al. Adjunctive interferon-γ immunotherapy for the treatment of HIV-associated cryptococcal meningitis: a randomized controlled trial. AIDS 26, 1105–1113 (2012). source
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- cites [125] Pappas, P. G. et al. Recombinant interferon-γ1b as adjunctive therapy for AIDS-related acute cryptococcal meningitis. J. Infect. Dis. 189, 2185–2191 (2004). source
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- Premisecitation
18B7 modulates C. neoformans gene expression and metabolism, resulting in increased susceptibility to antifungal drugs.
“18B7 is capable of modulating C. neoformans gene expression and metabolism, resulting in increased susceptibility to antifungal drugs130.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [130] McClelland, E. E., Nicola, A. M., Prados-Rosales, R. & Casadevall, A. Ab binding alters gene expression in Cryptococcus neoformans and directly modulates fungal metabolism. J. Clin. Invest. 120, 1355–1361 (2010). source
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- Premisecitation
Subsequent studies to identify compounds that augment amphotericin B and fluconazole activity against Cryptococcus spp. identified numerous antipsychotic drugs, including sertraline, trifluoperazine and thioridazine.
“Subsequent studies to identify compounds that augment amphotericin B and fluconazole activity against Cryptococcus spp. also identified numerous antipsychotic drugs, including sertraline, trifluoperazine and thioridazine112,113.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [112] Spitzer, M. et al. Cross-species discovery of syncretic drug combinations that potentiate the antifungal fluconazole. Mol. Syst. Biol. 7, 499 (2011). source
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- cites [113] Rossi, S. A. et al. Identification of off-patent drugs that show synergism with amphotericin B or that present antifungal action against Cryptococcus neoformans and Candida spp. Antimicrob. Agents Chemother. 64, e01921-19 (2020). source
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- Premisecitation
Several β-lactam antibiotics were identified as antagonistic with fluconazole in C. neoformans.
“Several β-lactam antibiotics were identified as antagonistic with fluconazole in C. neoformans, an important consideration given that susceptible patient populations often have comorbidities119.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [119] Wambaugh, M. A. et al. Synergistic and antagonistic drug interactions in the treatment of systemic fungal infections. eLife 9, e54160 (2020). source
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- Premisecitation
Pathogen-specific analyses revealed that many compounds display species-specific chemical-genetic interactions.
“Chemical–genetic mapping of synergistic compound pairs has been explored in Saccharomyces cerevisiae, but pathogen-specific analyses have revealed that many compounds display species-specific chemical–genetic interactions118.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [118] Brown, J. C. S. et al. Unraveling the biology of a fungal meningitis pathogen using chemical genetics. Cell 159, 1168–1187 (2014). This work establishes a chemical–genetic platform providing an approach to explore antifungal activities of novel compounds and predict synergistic antifungal combinations that are effective against Cryptococcus spp. source
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- Premisecitation
Clofazimine is a broad-spectrum adjuvant therapy capable of acting synergistically with both caspofungin and fluconazole against C. neoformans, among other fungal species.
“A study assessing the combination of known antifungals with ~3,600 bioactive compounds identified clofazimine as a broad-spectrum adjuvant therapy that is capable of acting synergistically with both caspofungin and fluconazole against C. neoformans, among other fungal species115”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [115] Robbins, N. et al. An antifungal combination matrix identifies a rich pool of adjuvant molecules that enhance drug activity against diverse fungal pathogens. Cell Rep. 13, 1481–1492 (2015). source
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- Premisecitation
Analysis of the chemical structures of drugs with anti-cryptococcal activity revealed a general structure comprising a hydrophobic or lipophilic moiety linked to a cationic amine substituent.
“Analysis of the chemical structures of drugs with anti-cryptococcal activity revealed a general structure comprising a hydrophobic or lipophilic moiety linked to a cationic amine substituent111.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [111] Butts, A. et al. A repurposing approach identifies off-patent drugs with fungicidal cryptococcal activity, a common structural chemotype, and pharmacological properties relevant to the treatment of cryptococcosis. Eukaryot. Cell 12, 278–287 (2013). source
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- Premisecitation
Studies in animal models have emphasized the importance of CD4+ T cell-mediated immunity, particularly T helper 1 cells, in protection against cryptococcosis.
“Studies in animal models have emphasized the importance of CD4+ T cell-mediated immunity (particularly T helper 1 cells) in protection against cryptococcosis120,121.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [120] Wozniak, K. L. et al. Insights into the mechanisms of protective immunity against Cryptococcus neoformans infection using a mouse model of pulmonary cryptococcosis. PLoS ONE 4, e6854 (2009). source
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- cites [121] Hole, C. R. & Wormley, F. L. Jr Vaccine and immunotherapeutic approaches for the prevention of cryptococcosis: lessons learned from animal models. Front. Microbiol. 3, 291 (2012).
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- Premisecitation
Interactions between Cryptococcus spp. and host immune responses dictate disease progression.
“It has become increasingly evident that interactions between Cryptococcus spp. and host immune responses dictate disease progression4, demanding a greater understanding of pathogen–host immune interactions.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [4] Perfect, J. R. et al. Clinical practice guidelines for the management of cryptococcal disease: 2010 update by the Infectious Diseases Society of America. Clin. Infect. Dis. 50, 291–322 (2010). source
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- Premisecitation
18B7 is a mouse-derived monoclonal antibody directed against glucuronoxylomannan, the primary component of the C. neoformans polysaccharide capsule.
“A well-characterized example is 18B7, a mouse-derived monoclonal antibody directed against glucuronoxylomannan, the primary component of the C. neoformans polysaccharide capsule129”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [129] Casadevall, A. et al. Characterization of a murine monoclonal antibody to Cryptococcus neoformans polysaccharide that is a candidate for human therapeutic studies. Antimicrob. Agents Chemother. 42, 1437–1446 (1998). source
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- Premisecitation
In a phase I/II trial in patients with AIDS-related cryptococcal meningitis, administration of 18B7 was safe.
“Administration of 18B7 was safe and transiently reduced serum antigen levels at high doses but exhibited poor cerebrospinal fluid penetration132.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [132] Larsen, R. A. et al. Phase I evaluation of the safety and pharmacokinetics of murine-derived anticryptococcal antibody 18B7 in subjects with treated cryptococcal meningitis. Antimicrob. Agents Chemother. 49, 952–958 (2005). source
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- Premisecitation
The overlap2 method applied to a compound library enriched for FDA-approved compounds against C. neoformans predicted that the anticholinergic drug dicyclomine HCl with fluconazole would serve as a potent anti-cryptococcal combination therapy.
“For example, the overlap2 method was applied to a compound library enriched for FDA-approved compounds against C. neoformans116–119 and successfully predicted that the anticholinergic drug dicyclomine HCl with fluconazole would serve as a potent anti-cryptococcal combination therapy.”
Quote in the paperSubstantial claim0 of 4 sources checked- cites [116] Wambaugh, M. A. & Brown, J. C. S. High-throughput identification of synergistic drug combinations by the overlap2 method. J. Vis. Exp. 135, 57241 (2018).
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- cites [117] Wambaugh, M. A., Shakya, V. P. S., Lewis, A. J., Mulvey, M. A. & Brown, J. C. S. High-throughput identification and rational design of synergistic small-molecule pairs for combating and bypassing antibiotic resistance. PLoS Biol. 15, e2001644 (2017). source
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- cites [118] Brown, J. C. S. et al. Unraveling the biology of a fungal meningitis pathogen using chemical genetics. Cell 159, 1168–1187 (2014). This work establishes a chemical–genetic platform providing an approach to explore antifungal activities of novel compounds and predict synergistic antifungal combinations that are effective against Cryptococcus spp. source
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- cites [119] Wambaugh, M. A. et al. Synergistic and antagonistic drug interactions in the treatment of systemic fungal infections. eLife 9, e54160 (2020). source
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- Interpretationcitation
Glucan particles generated from acapsular mutant strains of C. neoformans and C. gattii show promise as a delivery system and adjuvant for cryptococcal vaccines.
“Glucan particles generated from acapsular mutant strains of C. neoformans and C. gattii show great promise as a delivery system and adjuvant for cryptococcal vaccines138.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [138] Specht, C. A. et al. Vaccination withrecombinant Cryptococcus proteins in glucan particles protects mice against cryptococcosis in a manner dependent upon mouse atrain and cryptococcal species. mBio 8, e01872-17 (2017). source
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- Premisecitation
Co-infections with C. neoformans and other pathogens represent a significant risk factor for the development of immune reconstitution inflammatory syndrome.
“Given that co-infections with C. neoformans and other pathogens represent a significant risk factor for the development of immune reconstitution inflammatory syndrome, this adverse reaction needs to be carefully monitored when advancing novel immunotherapies.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [139] Barber, D. L., Andrade, B. B., Sereti, I. & Sher, A. Immune reconstitution inflammatory syndrome: the trouble with immunity when you had none. Nat. Rev. Microbiol. 10, 150–156 (2012). source
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- Premisecitation
Immunocompetent mice immunized with H99γ and subsequently depleted of both CD4+ and CD8+ T cells were protected upon challenge with wild-type C. neoformans.
“Furthermore, immunocompetent mice immunized with H99γ that were subsequently depleted of both CD4+ T cells and CD8+ T cells were protected upon challenge with wild-type C. neoformans133.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [133] Wozniak, K. L., Young, M. L. & Wormley, F. L. Jr Protective immunity against experimental pulmonary cryptococcosis in T cell-depleted mice. Clin. Vaccine Immunol. 18, 717–723 (2011). source
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- Premisecitation
Immunization with a heat-killed C. neoformans mutant for the F-box protein Fbp1 (HK-fbp1) resulted in protection against Cryptococcus infection in mice depleted of CD4+ T cells.
“For example, immunization with a heat-killed C. neoformans mutant for the F-box protein Fbp1 (HK-fbp1) resulted in protection against Cryptococcus infection in mice depleted of CD4+ T cells137.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [137] Wang, Y., Wang, K., Masso-Silva, J. A., Rivera, A. & Xue, C. A heat-killed Cryptococcus mutant atrain induces host protection against multiple invasive mycoses in a murine vaccine model. mBio 10, e02145-19 (2019).
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- Premisecitation
Immunization with a C. neoformans strain genetically engineered to produce IFNγ (H99γ) induced protective immunity in mice depleted of CD4+ T cells.
“Interestingly, in a mouse model of cryptococcosis, immunization with a C. neoformans strain that was genetically engineered to produce IFNγ (H99γ) induced protective immunity in mice depleted of CD4+ T cells133,134.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [133] Wozniak, K. L., Young, M. L. & Wormley, F. L. Jr Protective immunity against experimental pulmonary cryptococcosis in T cell-depleted mice. Clin. Vaccine Immunol. 18, 717–723 (2011). source
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- cites [134] Wormley, F. L. Jr., Perfect, J. R., Steele, C. & Cox, G. M. Protection against cryptococcosis by using a murine γ interferon-producing Cryptococcus neoformans strain. Infect. Immun. 75, 1453–1462 (2007). source
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- May combine two claims. 47
- Classified as probably not a substantial claim. 5
- The quote only partly states this claim. 1
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FindingcitationAneuploidy has been reported for chromosomes 6, 10, 11 and 14, although the specific genetic elements responsible for the selective advantage remain unclear.
“Aneuploidy has been reported for other chromosomes, including chromosomes 6, 10, 11 and 14, although the specific genetic elements responsible for the selective advantage remain unclear17,22,25,26.”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [17] Sionov, E., Lee, H., Chang, Y. C. & Kwon-Chung, K. J. Cryptococcus neoformans overcomes stress of azole drugs by formation of disomy in specific multiple chromosomes. PLoS Pathog. 6, e1000848 (2010). source
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- cites [22] Stone, N. R. et al. Dynamic ploidy changes drive fluconazole resistance in human cryptococcal meningitis. J. Clin. Invest. 129, 999–1014 (2019). This paper presents the first clinical samples to demonstrate fluconazole heteroresistance due to aneuploidy, achieved through increased efflux levels. source
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- cites [25] Ngamskulrungroj, P. et al. Characterization of the chromosome 4 genes that affect fluconazole-induced disomy formation in Cryptococcus neoformans. PLoS ONE 7, e33022 (2012).
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FindingcitationEncochleated oral amphotericin B (CAmB) is effectively delivered to the central nervous system and displays antifungal efficacy in a mouse model.
“A new form of encochleated oral amphotericin B (CAmB), where amphotericin B is encapsulated in a lipid-containing crystal nanoparticle, is effectively delivered to the central nervous system and displays antifungal efficacy in a mouse model11.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [11] Lu, R. et al. Efficacy of oral encochleated amphotericin B in a mouse model of cryptococcal meningoencephalitis. mBio 10, e00724-19 (2019).
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FindingcitationA phase III trial reported 10-week mortality of 24% for the combination regimen, a considerable improvement compared with the current ~70% mortality rate in many low- and middle-income countries in Africa.
“The phase III trial reported 10-week mortality of 24%, which is a considerable improvement compared with the current ~70% mortality rate in many low- and middle-income countries in Africa6,14.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [6] Rajasingham, R. et al. Global burden of disease of HIV-associated cryptococcal meningitis: an updated analysis. Lancet Infect. Dis. 17, 873–881 (2017). source
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- cites [14] Molloy, S. F. et al. Antifungal combinations for treatment of cryptococcal meningitis in Africa. N. Engl. J. Med. 378, 1004–1017 (2018). This seminal study provides guidelines adopted by the WHO for combatting cryptococcal infections. source
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FindingcitationA clinical trial in HIV-positive patients with cryptococcal meningitis showed that combination of amphotericin B with flucytosine, followed by fluconazole, improved survival rates compared with amphotericin B alone and minimized toxic effects.
“a clinical trial with patients who are HIV-positive and suffering from cryptococcal meningitis showed that the combination of amphotericin B with the fluorinated pyrimidine analogue flucytosine, followed by the triazole fluconazole, improved survival rates compared with amphotericin B alone and minimized toxic effects13.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [13] Day, J. N. et al. Combination antifungal therapy for cryptococcal meningitis. N. Engl. J. Med. 368, 1291–1302 (2013). This important clinical trial shows that the combination of amphotericin B and flucytosine improves survival of patients with cryptococcal meningitis. source
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Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
FindingcitationAn estimated 223,100 cases of cryptococcal meningitis occur globally each year, leading to 181,100 deaths.
“An estimated 223,100 cases of cryptococcal meningitis occur globally each year, leading to 181,100 deaths6.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [6] Rajasingham, R. et al. Global burden of disease of HIV-associated cryptococcal meningitis: an updated analysis. Lancet Infect. Dis. 17, 873–881 (2017). source
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May combine two claims.
FindingcitationThese mutations result in an ~200-fold higher mutation rate than in standard laboratory strains and preferentially affect genes containing homopolymer runs.
“These mutations result in an ~200-fold higher mutation rate than in standard laboratory strains30 and preferentially affect genes containing homopolymer runs33.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [30] Boyce, K. J. et al. Mismatch repair of DNA replication errors contributes to microevolution in the pathogenic fungus Cryptococcus neoformans. mBio 8, e00595-17 (2017). This report is one of the first of a hypermutator strain in clinical isolates, which has a fitness advantage owing to mutations in mismatch repair genes. source
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- cites [33] Billmyre, R. B., Clancey, S. A. & Heitman, J. Natural mismatch repair mutations mediate phenotypic diversity and drug resistance in Cryptococcus deuterogattii. eLife 6, e28802 (2017). source
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FindingcitationThe increase in chitin induces a T helper 2-type allergic response and cytokine release, rather than a protective T helper 1-type response, which leads to increased mortality in infected mice.
“This increase in chitin induces a T helper 2-type allergic response and cytokine release, rather than a protective T helper 1-type response, which leads to increased mortality in infected mice152.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [152] Wiesner, D. L. et al. Chitin recognition via chitotriosidase promotes pathologic type-2 helper T cell responses to cryptococcal infection. PLoS Pathog. 11, e1004701 (2015). source
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FindingcitationC. neoformans cells with thicker capsules exhibit amphotericin B resistance and enhanced virulence.
“C. neoformans cells with thicker capsules exhibit amphotericin B resistance and enhanced virulence40,41”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [40] Cordoba, S., Afeltra, J. & Vitale, R. G. Evaluation of the in vitro activity of amphotericin B by time-kill curve methodology against large and small capsulate C. neoformans isolates. Diagn. Microbiol. Infect. Dis. 71, 260–262 (2011). source
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- cites [41] Park, Y. D. et al. A role for LHC1 in higher order structure and complement binding of the Cryptococcus neoformans capsule. PLoS Pathog. 10, e1004037 (2014).
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FindingcitationA genetic screen of more than 10,000 C. neoformans mutants identified CDC50 as integral to echinocandin resistance and demonstrated its involvement in maintaining lipid asymmetry of the phospholipid membrane.
“A genetic screen of more than 10,000 C. neoformans mutants provided insight into this inherent resistance46. This screen identified CDC50 (encoding the β-subunit of a lipid flippase enzyme) as integral to echinocandin resistance and further demonstrated its involvement in maintaining lipid asymmetry of the phospholipid membrane46.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [46] Huang, W. et al. Lipid flippase subunit Cdc50 mediates drug resistance and virulence in Cryptococcus neoformans. mBio 7, e00478-16 (2016). This paper provides foundational genetic insights into the intrinsic echinocandin resistance of Cryptococcus. source
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FindingcitationThe transition to titan cells can be triggered by muramyl dipeptide in serum and is regulated by USV101, STE3a and GPR5, which converge on the cAMP-PKA pathway.
“This transition can be triggered by the bacterial peptidoglycan subunit muramyl dipeptide in serum and is regulated by USV101 (ref.149) as well as STE3a and GPR5 (ref.150), which converge on the cAMP–PKA pathway149,150.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [149] Dambuza, I. M. et al. The Cryptococcus neoformans titan cell is an inducible and regulated morphotype underlying pathogenesis. PLoS Pathog. 14, e1006978 (2018). source
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- cites [150] Okagaki, L. H. et al. Cryptococcal titan cell formation is regulated by G-protein signaling in response to multiple stimuli. Eukaryot. Cell 10, 1306–1316 (2011). source
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FindingcitationOn titan cell formation, the polysaccharide capsule becomes condensed and highly crosslinked; the cell wall can increase in thickness from 50-100 nm to 2-3 μm; and cell wall composition is altered through an increase in chitin content and a decrease in glucan.
“On titan cell formation, the polysaccharide capsule surrounding Cryptococcus cells becomes condensed and highly crosslinked151; the cell wall can increase in thickness from 50–100 nm to 2–3 µm (ref.147), and the cell wall composition is altered through an increase in chitin content and a decrease in glucan152.”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [147] Zaragoza, O. et al. Fungal cell gigantism during mammalian infection. PLoS Pathog. 6, e1000945 (2010). source
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- cites [151] Mukaremera, L. et al. Titan cell production in Cryptococcus neoformans reshapes the cell wall and capsule composition during infection. Cell Surf. 1, 15–24 (2018). source
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- cites [152] Wiesner, D. L. et al. Chitin recognition via chitotriosidase promotes pathologic type-2 helper T cell responses to cryptococcal infection. PLoS Pathog. 11, e1004701 (2015). source
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May combine two claims.
FindingcitationCdc50 directly interacts with Crm1 and negatively regulates its expression.
“Cdc50 directly interacts with Crm1 and negatively regulates its expression47.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [47] Cao, C., Wang, Y., Husain, S., Soteropoulos, P. & Xue, C. A mechanosensitive channel governs lipid flippase-mediated echinocandin resistance in Cryptococcus neoformans. mBio 10, e01952-19 (2019).
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Probably not a substantial claim: may not pass S4 (based).
Premisenone givenTreatment options for cryptococcosis remain limited, with only three major classes of drugs approved for clinical use.
“Despite these alarming statistics, treatment options for cryptococcosis remain limited, with only three major classes of drugs approved for clinical use.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationThe traits of genomic plasticity and physiological adaptability can be inherited and are often transient, such that they are lost when the stress is removed.
“These traits can be inherited, and are often transient, such that they are lost when the stress is removed17,18.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [17] Sionov, E., Lee, H., Chang, Y. C. & Kwon-Chung, K. J. Cryptococcus neoformans overcomes stress of azole drugs by formation of disomy in specific multiple chromosomes. PLoS Pathog. 6, e1000848 (2010). source
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- cites [18] Sionov, E., Chang, Y. C., Garraffo, H. M. & Kwon-Chung, K. J. Heteroresistance to fluconazole in Cryptococcus neoformans is intrinsic and associated with virulence. Antimicrob. Agents Chemother. 53, 2804–2815 (2009). source
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InterpretationcitationScarcity of flucytosine and amphotericin B has resulted in widespread use of the much less effective fluconazole monotherapy, which explains the dramatically high mortality rate in low- and middle-income African countries.
“Scarcity of these two drugs has resulted in the widespread use of the much less effective fluconazole monotherapy, which explains the dramatically high mortality rate in these low- and middle-income African countries4,7.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [4] Perfect, J. R. et al. Clinical practice guidelines for the management of cryptococcal disease: 2010 update by the Infectious Diseases Society of America. Clin. Infect. Dis. 50, 291–322 (2010). source
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- cites [7] Loyse, A. et al. Leave no one behind: response to new evidence and guidelines for the management of cryptococcal meningitis in low-income and middle-income countries. Lancet Infect. Dis. 19, e143–e147 (2019). source
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Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationImmunocompromised individuals are most vulnerable to cryptococcal infection, but cryptococcal infections also occur in immunocompetent hosts.
“immunocompromised individuals are most vulnerable, but there are also reports of cryptococcal infections in immunocompetent hosts4,5”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [4] Perfect, J. R. et al. Clinical practice guidelines for the management of cryptococcal disease: 2010 update by the Infectious Diseases Society of America. Clin. Infect. Dis. 50, 291–322 (2010). source
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- cites [5] Kwon-Chung, K. J. et al. Cryptococcus neoformans and Cryptococcus gattii, the etiologic agents of cryptococcosis. Cold Spring Harb. Perspect. Med. 4, a019760 (2014). source
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PremisecitationCryptococcus spp. are intrinsically resistant to echinocandins and employ defences that enable resistance to azoles.
“Treatment options for invasive cryptococcal infection are limited, given that Cryptococcus spp. are intrinsically resistant to echinocandins and that they employ an arsenal of defences that enable resistance to azoles2,8.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [2] Lee, Y., Puumala, E., Robbins, N. & Cowen, L. E. Antifungal drug resistance: molecular mechanisms in Candida albicans and beyond. Chem. Rev. https://doi.org/10.1021/acs.chemrev.0c00199 (2020). source
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- cites [8] Denning, D. W. Echinocandin antifungal drugs. Lancet 362, 1142–1151 (2003). source
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PremisecitationIn low- and middle-income countries, flucytosine is not available owing to market failure and lack of in-country registration, and access to amphotericin B and its liposomal form is limited due to high cost and lack of safe intravenous administration.
“In low- and middle-income countries, flucytosine is not available owing to market failure and lack of in-country registration, whereas access to amphotericin B and its liposomal form is limited due to the high cost and lack of safe intravenous administration7.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [7] Loyse, A. et al. Leave no one behind: response to new evidence and guidelines for the management of cryptococcal meningitis in low-income and middle-income countries. Lancet Infect. Dis. 19, e143–e147 (2019). source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
Premisenone givenCryptococcus neoformans and Cryptococcus gattii are the major species responsible for life-threatening cryptococcal meningitis.
“C. neoformans and Cryptoccocus gattii are the major species responsible for life-threatening cryptococcal meningitis”
Quote in the paperNot a substantial claimMay combine two claims.
InterpretationcitationHeteroresistance has major clinical implications, as the proportion of resistant cells increases over the course of therapy, making this mechanism a major contributor to relapse during azole maintenance therapy.
“Heteroresistance has major clinical implications, as the proportion of resistant cells increases over the course of therapy, making this mechanism a major contributor to relapse during azole maintenance therapy22,23.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [22] Stone, N. R. et al. Dynamic ploidy changes drive fluconazole resistance in human cryptococcal meningitis. J. Clin. Invest. 129, 999–1014 (2019). This paper presents the first clinical samples to demonstrate fluconazole heteroresistance due to aneuploidy, achieved through increased efflux levels. source
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- cites [23] Rhodes, J. et al. A population genomics approach to assessing the genetic basis of within-host microevolution underlying recurrent cryptococcal meningitis infection. G3 7, 1165–1176 (2017). source
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PremisecitationAmphotericin B has been the primary treatment for cryptococcal infection for more than half a century, despite causing substantial toxicity and limited availability due to economic and logistical constraints.
“the polyene amphotericin B has been the primary treatment for cryptococcal infection for more than half a century, despite the fact that it causes substantial toxicity and that its availability is limited by economic and logistical constraints2,4”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [2] Lee, Y., Puumala, E., Robbins, N. & Cowen, L. E. Antifungal drug resistance: molecular mechanisms in Candida albicans and beyond. Chem. Rev. https://doi.org/10.1021/acs.chemrev.0c00199 (2020). source
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- cites [4] Perfect, J. R. et al. Clinical practice guidelines for the management of cryptococcal disease: 2010 update by the Infectious Diseases Society of America. Clin. Infect. Dis. 50, 291–322 (2010). source
Not checked in the free run.
May combine two claims.
PremisecitationThe Cryptococcus polysaccharide capsule modulates immune responses, enhances pathogenicity and confers protection against oxidative stress.
“The Cryptococcus polysaccharide capsule modulates immune responses, enhances pathogenicity and confers protection against oxidative stress55,56.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [55] Zaragoza, O. Basic principles of the virulence of Cryptococcus. Virulence 10, 490–501 (2019). source
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- cites [56] McFadden, D., Zaragoza, O. & Casadevall, A. The capsular dynamics of Cryptococcus neoformans. Trends Microbiol. 14, 497–505 (2006). source
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Probably not a substantial claim: may not pass S3 (load-bearing).
InterpretationcitationRapid genome alteration resulting in aneuploid cells has been proposed as an alternative mechanism of heteroresistance.
“this rapid genome alteration resulting in aneuploid cells has been proposed as an alternative mechanism of heteroresistance43.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [43] Zafar, H., Altamirano, S., Ballou, E. R. & Nielsen, K. A titanic drug resistance threat in Cryptococcus neoformans. Curr. Opin. Microbiol. 52, 158–164 (2019). This seminal review summarizes the current understanding of the mechanisms underlying antifungal resistance of the Cryptococcus titan cell. source
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InterpretationcitationTransposon-driven mutagenesis was enhanced in multiple strains at 37 °C compared with 30 °C, suggesting that the body temperature of a mammalian host may amplify this phenomenon.
“transposon-driven mutagenesis was enhanced in multiple strains at 37 °C compared with that at 30 °C, suggesting that the body temperature of a mammalian host may amplify this phenomenon38.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [38] Gusa, A. et al. Transposon mobilization in the human fungal pathogen Cryptococcus is mutagenic during infection and promotes drug resistance in vitro. Proc. Natl Acad. Sci. USA 117, 9973–9980 (2020). This paper is the first description of transposon-mediated antifungal resistance in Cryptococcus spp. source
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PremisecitationAPX879, an FK506 analogue with an acetohydrazine substitution of the C22 carbonyl, has 70-fold lower immunosuppressive effects than FK506 while retaining antifungal activity.
“enabling the design of APX879, an FK506 analogue with an acetohydrazine substitution of the C22 carbonyl, which has 70-fold lower immunosuppressive effects than FK506 while retaining antifungal activity77”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [77] Juvvadi, P. R. et al. Harnessing calcineurin–FK506–FKBP12 crystal structures from invasive fungal pathogens to develop antifungal agents. Nat. Commun. 10, 4275 (2019). This paper presents an excellent example of successful structure-guided drug design to develop fungal-specific calcineurin inhibitors. source
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PremisecitationMelanin is produced by laccases, which are upregulated in C. neoformans clinical and environmental isolates.
“Melanin is produced by laccases, which are upregulated in C. neoformans clinical and environmental isolates66”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [66] Lahiri, S. et al. In vitro expression of vital virulent genes of clinical and environmental isolates of Cryptococcus neoformans/gattii in endothelial cells of human blood–brain barrier. J. Mycol. Med. 29, 239–244 (2019). source
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PremisecitationThe fungal cell wall is important for cell integrity and for modulating the host immune response.
“The fungal cell wall is a dynamic structure that is important not only for cell integrity but also for modulating the host immune response39.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [39] Garcia-Rubio, R., de Oliveira, H. C., Rivera, J. & Trevijano-Contador, N. The fungal cell wall: Candida, Cryptococcus, and Aspergillus species. Front. Microbiol. 10, 2993 (2019). source
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PremisecitationDeletion of the gene encoding either Cxt1 or Lhc1 impairs capsule linkage and reduces the fungal burden in infections in mice.
“Deletion of the gene encoding either of these enzymes impairs capsule linkage and reduces the fungal burden in infections in mice41,57.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [41] Park, Y. D. et al. A role for LHC1 in higher order structure and complement binding of the Cryptococcus neoformans capsule. PLoS Pathog. 10, e1004037 (2014).
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- cites [57] Klutts, J. S. & Doering, T. L. Cryptococcal xylosyltransferase 1 (Cxt1p) from Cryptococcus neoformans plays a direct role in the synthesis of capsule polysaccharides. J. Biol. Chem. 283, 14327–14334 (2008). source
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PremisecitationPhospholipase B1 (PLB1) facilitates Cryptococcus adherence to and invasion of the host cell, contributes to fungal cell wall integrity and degrades host cell membranes, thereby providing nutrients that support fungal survival.
“For example, phospholipase B1 (encoded by PLB1) facilitates Cryptococcus adherence to and invasion of the host cell, contributes to fungal cell wall integrity and degrades host cell membranes, thereby providing nutrients that support fungal survival69,70.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [69] Wright, L. C. et al. Cryptococcal lipid metabolism: phospholipase B1 is implicated in transcellular metabolism of macrophage-derived lipids. Eukaryot. Cell 6, 37–47 (2007). source
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- cites [70] Siafakas, A. R. et al. Cell wall-linked cryptococcal phospholipase B1 is a source of secreted enzyme and a determinant of cell wall integrity. J. Biol. Chem. 282, 37508–37514 (2007). source
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PremisecitationThe C. neoformans homologue of mTOR kinase, Tor1, is essential for Cryptococcus stress response signalling, virulence and fluconazole tolerance.
“The C. neoformans homologue of mTOR kinase, Tor1, is essential for Cryptococcus stress response signalling, virulence84,85 and fluconazole tolerance (that is, the ability of a drug-susceptible organism to grow in the presence of an antifungal drug at concentrations above the minimum inhibitory concentration)86.”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [84] Lee, H., Khanal Lamichhane, A., Garraffo, H. M., Kwon-Chung, K. J. & Chang, Y. C. Involvement of PDK1, PKC and TOR signalling pathways in basal fluconazole tolerance in Cryptococcus neoformans. Mol. Microbiol. 84, 130–146 (2012). source
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- cites [85] So, Y. S., Lee, D. G., Idnurm, A., Ianiri, G. & Bahn, Y. S. The TOR pathway pays pleiotropic roles in growth and stress responses of the fungal pathogen Cryptococcus neoformans. Genetics 212, 1241–1258 (2019). source
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- cites [86] Berman, J. & Krysan, D. J. Drug resistance and tolerance in fungi. Nat. Rev. Microbiol. 18, 319–331 (2020). source
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May combine two claims.
PremisecitationAn inhibitor of Hsp90 with 25-fold greater selectivity for Candida albicans Hsp90 than human HSP90 and aminopyrazole-substituted resorcylate amides with more than 30-fold greater selectivity for C. neoformans Hsp90 than human HSP90 have been identified.
“An inhibitor of Hsp90 with 25-fold greater selectivity for Candida albicans Hsp90 than for human HSP90 (ref.81) and aminopyrazole-substituted resorcylate amides with more than 30-fold greater selectivity for C. neoformans Hsp90 than for human HSP90 (ref.82) have been identified”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites ref.81
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- cites ref.82
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PremisecitationThe secreted peptide Qsp1 is an important virulence determinant that acts as an autoregulatory signalling molecule and is transported into the fungal cell through Opt1 to initiate a diverse transcriptional response, including production of proteases and activation of cell wall integrity.
“Finally, the secreted peptide Qsp1 is an important virulence determinant that acts as an autoregulatory signalling molecule and is transported into the fungal cell through Opt1 to initiate a diverse transcriptional response, including the production of proteases and activation of cell wall integrity72,73.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [72] Lee, H., Chang, Y. C., Nardone, G. & Kwon-Chung, K. J. TUP1 disruption in Cryptococcus neoformans uncovers a peptide-mediated density-dependent growth phenomenon that mimics quorum sensing. Mol. Microbiol. 64, 591–601 (2007). source
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- cites [73] Homer, C. M. et al. Intracellular action of a secreted peptide required for fungal virulence. Cell Host Microbe 19, 849–864 (2016). source
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May combine two claims.
PremisecitationMelanin is a major virulence factor that protects fungal cells from oxidative damage, antifungal assault and high temperature, and also modulates host immune responses.
“In particular, melanin is a major virulence factor that protects fungal cells from oxidative damage, antifungal assault and high temperature, and also modulates host immune responses39.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [39] Garcia-Rubio, R., de Oliveira, H. C., Rivera, J. & Trevijano-Contador, N. The fungal cell wall: Candida, Cryptococcus, and Aspergillus species. Front. Microbiol. 10, 2993 (2019). source
Not checked in the free run.
May combine two claims.
PremisecitationHsp90 inhibition impairs C. neoformans virulence traits, such as capsule assembly, and increases susceptibility to antifungal agents.
“Hsp90 inhibition has been shown to impair C. neoformans virulence traits, such as capsule assembly, and increase susceptibility to antifungal agents79,80.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [79] Chatterjee, S. & Tatu, U. Heat shock protein 90 localizes to the surface and augments virulence factors of Cryptococcus neoformans. PLoS Negl. Trop. Dis. 11, e0005836 (2017). source
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- cites [80] Cordeiro, R. A. et al. Inhibition of heat-shock protein 90 enhances the susceptibility to antifungals and reduces the virulence of Cryptococcus neoformans/Cryptococcus gattii species complex. Microbiology 162, 309–317 (2016). source
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May combine two claims.
PremisecitationDeletion of CAP10, CAP60 and PXB1 blocks capsule production and leads to attenuated virulence.
“Deletion of CAP10, CAP60 and PXB1 not only blocks capsule production but also leads to attenuated virulence52,58.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [52] Liu, O. W. et al. Systematic genetic analysis of virulence in the human fungal pathogen Cryptococcus neoformans. Cell 135, 174–188 (2008). source
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- cites [58] Almeida, F., Wolf, J. M. & Casadevall, A. Virulence-associated enzymes of Cryptococcus neoformans. Eukaryot. Cell 14, 1173–1185 (2015). source
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May combine two claims.
PremisecitationMefloquine derivatives have improved in vitro antifungal activity and impede C. neoformans capsule formation and melanization.
“but mefloquine derivatives have been identified that have improved in vitro antifungal activity and that impede C. neoformans capsule formation and melanization104.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [104] Montoya, M. C., Beattie, S., Alden, K. M. & Krysan, D. J. Derivatives of the antimalarial drug mefloquine are broad-spectrum antifungal molecules with activity against drug-resistant clinical isolates. Antimicrob. Agents Chemother. 64, e02331-19 (2020). source
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PremisecitationMacrolides reduce capsule formation in C. gattii, impairing this key virulence trait and resulting in enhanced phagocytosis and inflammatory cytokine production by macrophages in culture.
“Another example is the macrolides, commonly used antibiotics that target protein synthesis, which reduce capsule formation in C. gattii, impairing this key virulence trait and resulting in enhanced phagocytosis and inflammatory cytokine production by macrophages in culture59.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [59] Nakamura, S. et al. Macrolides inhibit capsule formation of highly virulent Cryptococcus gattii and promote innate immune susceptibility. Antimicrob. Agents Chemother. 63, e02364-18 (2019).
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PremisecitationClinical trials with APX001 for the treatment of cryptococcosis are starting imminently, and phase II trials for invasive infections caused by Aspergillus spp. and Candida spp. are currently underway.
“Clinical trials with APX001 for the treatment of cryptococcosis are starting imminently, and phase II trials for the treatment of invasive infections caused by Aspergillus spp. and Candida spp. are currently underway (NCT02957929, NCT02956499 and NCT04240886)”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites NCT02957929
Not checked in the free run.
- cites NCT02956499
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- cites NCT04240886
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PremisecitationGwt1 is an important virulence factor and the enzyme responsible for catalysing an early step in glycosylphosphatidylinositol (GPI)-anchor biosynthesis.
“Gwt1, an important virulence factor and the enzyme responsible for catalysing an early step in glycosylphosphatidylinositol (GPI)-anchor biosynthesis96, has also emerged as a promising antifungal target.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [96] Zhao, Q. et al. GWT1 encoding an inositol acyltransferase homolog is required for laccase repression and stress resistance in the basidiomycete Cryptococcus neoformans. FEMS Yeast Res. 15, fov086 (2015). source
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PremisecitationTamoxifen displayed potent anti-cryptococcal activity in vitro and in a mouse model of disseminated cryptococcosis.
“Similarly, tamoxifen, an oestrogen receptor modulator that is used to treat and prevent breast cancer and osteoporosis, also displayed potent anti-cryptococcal activity in vitro106 and in a mouse model of disseminated cryptococcosis107.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [106] Dolan, K. et al. Antifungal activity of tamoxifen: in vitro and in vivo activities and mechanistic characterization. Antimicrob. Agents Chemother. 53, 3337–3346 (2009). source
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- cites [107] Butts, A. et al. Estrogen receptor antagonists are anti-cryptococcal agents that directly bind EF hand proteins and synergize with fluconazole in vivo. mBio 5, e00765-13 (2014). source
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PremisecitationOf the 31 molecules with fungilytic activity, the largest class of inhibitors identified were antipsychotic agents, with general antiseptic agents following close behind.
“Of these 31 molecules, the largest class of inhibitors identified were antipsychotic agents, with general antiseptic agents following close behind111.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [111] Butts, A. et al. A repurposing approach identifies off-patent drugs with fungicidal cryptococcal activity, a common structural chemotype, and pharmacological properties relevant to the treatment of cryptococcosis. Eukaryot. Cell 12, 278–287 (2013). source
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PremisecitationVT-1598 displays broad-spectrum activity against diverse fungi, including strong therapeutic potential in a mouse model of cryptococcal meningitis.
“Similar to other clinically approved azoles, VT-1598 displays broad-spectrum activity against diverse fungi, including a strong therapeutic potential in a mouse model of cryptococcal meningitis101.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [101] Garvey, E. P., Sharp, A. D., Warn, P. A., Yates, C. M. & Schotzinger, R. J. The novel fungal CYP51 inhibitor VT-1598 is efficacious alone and in combination with liposomal amphotericin B in a murine model of cryptococcal meningitis. J. Antimicrob. Chemother. 73, 2815–2822 (2018). source
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PremisecitationFenbendazole displays potent in vitro activity against C. neoformans and C. gattii, as well as in vivo activity in a mouse model of cryptococcosis.
“Fenbendazole displays potent in vitro activity against C. neoformans and C. gattii, as well as in vivo activity in a mouse model of cryptococcosis103.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [103] de Oliveira, H. C. et al. Fenbendazole controls in vitro growth, virulence potential, and animal infection in the Cryptococcus model. Antimicrob. Agents Chemother. 64, e00286-20 (2020). source
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PremisecitationA high-throughput screen of more than 300,000 compounds from the US NIH Molecular Libraries Program identified agents with fungicidal activity against C. neoformans, with secondary assays prioritizing compounds that interfered with fungal cell wall integrity.
“A high-throughput screen of >300,000 compounds from the US National Institutes of Health (NIH) Molecular Libraries Program was undertaken to identify agents with fungicidal activity against C. neoformans, where secondary assays prioritized compounds that interfered with fungal cell wall integrity91.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [91] Hartland, K. et al. High-throughput screen in Cryptococcus neoformans identifies a novel molecular scaffold that inhibits cell wall integrity pathway signaling. ACS Infect. Dis. 2, 93–102 (2016). source
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PremisecitationSystematic analysis of dark chemical matter revealed that these compounds are not biologically inert and identified a potent inhibitor of C. neoformans growth in vitro.
“Systematic analysis of these apparently inactive compounds revealed that they are not biologically inert, and even identified a potent inhibitor of C. neoformans growth in vitro87.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [87] Wassermann, A. M. et al. Dark chemical matter as a promising starting point for drug lead discovery. Nat. Chem. Biol. 11, 958–966 (2015). This paper reaffirms that dark chemical matter compounds can be attractive lead compounds and demonstrates the potential for anti-cryptococcal drug discovery. source
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- Rests on an assumption: Most compound libraries have been designed to maximize drug-like properties with respect to mammalian targets and physiology, whereas antifungal drugs require unique physicochemical properties.
May combine two claims.
PremisecitationThe efficacy of fenbendazole was attributed to its growth-inhibitory properties, its inhibition of Cryptococcus virulence determinants and its inhibition of fungal proliferation inside macrophages.
“The efficacy of fenbendazole was attributed to its growth-inhibitory properties, its inhibition of Cryptococcus virulence determinants and its inhibition of fungal proliferation inside macrophages103.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [103] de Oliveira, H. C. et al. Fenbendazole controls in vitro growth, virulence potential, and animal infection in the Cryptococcus model. Antimicrob. Agents Chemother. 64, e00286-20 (2020). source
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May combine two claims.
InterpretationcitationCombination therapy has the potential to confer enhanced efficacy and fungal selectivity while reducing vulnerability to the evolution of resistance.
“Combination therapy has the potential to confer enhanced efficacy and fungal selectivity while reducing vulnerability to the evolution of resistance2.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [2] Lee, Y., Puumala, E., Robbins, N. & Cowen, L. E. Antifungal drug resistance: molecular mechanisms in Candida albicans and beyond. Chem. Rev. https://doi.org/10.1021/acs.chemrev.0c00199 (2020). source
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PremisecitationThe amphipathic nature of this motif permits crossing of biological membranes, a property important for traversing the blood-brain barrier and accessing cryptococcal cells that reside within the lysosome or phagolysosome of host cells.
“The amphipathic nature of this motif permits the crossing of biological membranes, a property that is important for traversing the blood–brain barrier and accessing cryptococcal cells that reside within the lysosome or phagolysosome of host cells114.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [114] Banks, W. A. Characteristics of compounds that cross the blood–brain barrier. BMC Neurol. 9, S3 (2009). source
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PremisecitationHeat-killed mutant strains induce strong T helper 1 cell responses, resulting in full protection against C. neoformans challenge.
“Heat-killed mutant strains have also been reported to induce strong T helper 1 cell responses, resulting in full protection against C. neoformans challenge65,136.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [65] Upadhya, R. et al. Induction of protective immunity to cryptococcal infection in mice by a heat-killed, chitosan-deficient strain of Cryptococcus neoformans. mBio 7, e00547-16 (2016). source
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- cites [136] Zhai, B. et al. Development of protective inflammation and cell-mediated immunity against Cryptococcus neoformans after exposure to hyphal mutants. mBio 6, e01433-15 (2015). source
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PremisecitationMice vaccinated with glucan particles containing cryptococcal antigens mounted antigen-specific T cell responses and sustained protection against cryptococcosis.
“Specifically, mice vaccinated with glucan particles containing cryptococcal antigens mounted antigen-specific T cell responses and sustained protection against cryptococcosis138.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [138] Specht, C. A. et al. Vaccination withrecombinant Cryptococcus proteins in glucan particles protects mice against cryptococcosis in a manner dependent upon mouse atrain and cryptococcal species. mBio 8, e01872-17 (2017). source
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The quote only partly states this claim.
PremisecitationAn avirulent but live mutant strain of C. neoformans lacking sterylglucosidase (sglΔ) induced protective effects similar to H99γ.
“Similar protective effects were seen with an avirulent but live mutant strain of C. neoformans lacking sterylglucosidase (sglΔ)134,135.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [134] Wormley, F. L. Jr., Perfect, J. R., Steele, C. & Cox, G. M. Protection against cryptococcosis by using a murine γ interferon-producing Cryptococcus neoformans strain. Infect. Immun. 75, 1453–1462 (2007). source
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- cites [135] Rella, A. et al. Role of sterylglucosidase 1 (Sgl1) on the pathogenicity of Cryptococcus neoformans: potential applications for vaccine development. Front. Microbiol. 6, 836 (2015). source
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The paper relies on this without support.
Virulence factors are not required for the growth of the pathogen but are crucial for causing disease.
“Targeting virulence factors, which are not required for the growth of the pathogen but, instead, are crucial for causing disease, opens up a plethora of new targets for drug development.”
The paper relies on this without support.
The fungal cell wall is absent from mammalian cells.
“This structure is absent from mammalian cells, and therefore great efforts have been made to develop antifungal agents that target this unique structure directly or that impair its biosynthesis.”
The paper relies on this without support.
Most compound libraries have been designed to maximize drug-like properties with respect to mammalian targets and physiology, whereas antifungal drugs require unique physicochemical properties.
“The development of new antifungal molecules remains a considerable challenge, as most compound libraries have been designed to maximize their ‘drug-like’ properties with respect to mammalian targets and physiology, whereas antifungal drugs require unique physicochemical properties, owing in part to the need for these molecules to transverse the fungal cell wall.”
The paper relies on this without support.
Antifungal molecules need good central nervous system penetration and should be able to be administered orally to ensure widespread access within developing countries with limited resources.
“Furthermore, because of the unique neurological features of cryptococcal disease, antifungal molecules are needed that have good central nervous system penetration, and they should be able to be administered orally to ensure widespread access within developing countries with limited resources.”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
C. neoformans is intrinsically resistant to echinocandins, and treatment options remain limited to polyenes, azoles, and flucytosine.
“C. neoformans is intrinsically resistant to echinocandins, and therefore treatment options remain limited to polyenes, azoles, and the pyrimidine analog flucytosine that targets RNA and DNA synthesis (Denning 2003; Iyer et al. 2021).”
From Genetic analysis of Hsp90 function in <i>Cryptococcus neoformans</i> highlights key roles in stress tolerance and virulence (2022) · cites this paper as Iyer et al. 2021
C. neoformans can develop resistance to all current antifungals by employing genetic, genomic, and adaptive biological strategies.
“C. neoformans is also able to develop resistance to all other current antifungals by employing a plethora of genetic, genomic, and adaptive biological strategies (Iyer et al. 2021).”
From Genetic analysis of Hsp90 function in <i>Cryptococcus neoformans</i> highlights key roles in stress tolerance and virulence (2022) · cites this paper as Iyer et al. 2021
Essential genes required for survival serve as optimal targets for novel antifungal development.
“Essential genes that are required for survival serve as optimal targets for novel antifungal development (Iyer et al. 2021).”
From Genetic analysis of Hsp90 function in <i>Cryptococcus neoformans</i> highlights key roles in stress tolerance and virulence (2022) · cites this paper as Iyer et al. 2021
Only a small number of essential genes have been identified and characterized in C. neoformans due to technical challenges of genetic manipulation.
“only a small number of essential genes have been identified and characterized in C. neoformans due to the technical challenges of genetic manipulation in this organism (Ianiri and Idnurm 2015; Iyer et al. 2021).”
From Genetic analysis of Hsp90 function in <i>Cryptococcus neoformans</i> highlights key roles in stress tolerance and virulence (2022) · cites this paper as Iyer et al. 2021
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
Each contradiction between two passages listed here was confirmed by an independent check.
18B7's development stage conflicts with its reported clinical trial
MinorTable 1 lists monoclonal antibody 18B7 at the basic-research stage, but the text says it was evaluated in a phase I/II trial.
“| Monoclonal antibody 18B7 | Binds to the capsular component glucuronoxylomannan | Efficacy displayed in basic research |”
“With promising anti-cryptococcal effects in rodent models, 18B7 was evaluated in a phase I/II trial in patients with AIDS-related cryptococcal meningitis132.”
Serotype A is assigned to two different varieties
MinorThe paper first assigns serotype A to C. neoformans var. grubii, then assigns serotype A isolates to var. neoformans.
“C. neoformans var. neoformans (serotype D) and C. neoformans var. grubii (serotype A)”
“serotype A isolates comprising var. neoformans (VN) lineages VNI and VNII”
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Self-citation
- Authors
- Iyer, K. R., Revie, N. M., Fu, C., Robbins, N., & Cowen, L. E.
- Affiliations
- University of Toronto (CA)
- Corresponding author
- Cowen, Leah E.
- Venue
- Nature Reviews Microbiology
- Published
- 2021-02-08
- Volume
- 19
- Issue
- 7
- Pages
- 454-466
- ISSN
- 1740-1526 (ISSN-L)
- 1740-1534
- PMC
- PMC7868659
- OpenAlex
- W3127236674
- Semantic Scholar
- b3debc518effc79a3f7043a7e5e11118b45e854d
- Cited by
- 363
- References
- 161
- Citations by year
- 2026: 50 · 2025: 84 · 2024: 82 · 2023: 55 · 2022: 55 · 2021: 35 · 2020: 1
- FWCI
- 8.75
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Nature Reviews Microbiology (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Canadian Institute for Advanced Research
- National Institutes of Health (NIAID R21)
- Canadian Institutes of Health Research (FDN154288)
- National Institute of Allergy and Infectious Diseases (R01AI127375, R21AI141080, R01AI120958)
- Topics
- Health Sciences › Medicine › Epidemiology › Fungal Infections and Studies
- Health Sciences › Medicine › Infectious Diseases › Antifungal resistance and susceptibility
- Life Sciences › Immunology and Microbiology › Microbiology › Bacterial Infections and Vaccines
- Keywords
- cryptococcosis, cryptococcal meningitis, Cryptococcus neoformans, Cryptococcus gattii, antifungal resistance, echinocandins, combination therapy, stress response pathways, antifungal drug discovery, host-pathogen interaction
- MeSH terms
- Antifungal Agents, Cell Wall, Cryptococcosis, Cryptococcus, Drug Resistance, Fungal, Virulence Factors, Echinocandins, Fungal Capsules, Fungal Polysaccharides
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