Dynamic succession of microbiota during ensiling of whole plant corn following inoculation with Lactobacillus buchneri and Lactobacillus hilgardii alone or in combination.
Open accessAbstract
Lactic acid bacteria (LAB) used as silage additives have been shown to improve several fermentation parameters, including aerobic stability. Inoculation with a combination of Lactobacillus buchneri NCIMB40788 and Lactobacillus hilgardii CNCM-I-4785, contributes to an increase in aerobic stability, compared to each strain inoculated independently. To understand the mode of action of the combination on the LAB community, a fermentation-kinetic study was performed on corn. Four treatments, Control, Lb. buchneri, Lb. hilgardii, and a combination of the two strains, were fermented 1, 2, 4, 8, 16, 32, and 64 days. Corn silage inoculated by both strains had a lactate:acetate ratio of 0.59 after 64 days and a higher concentration of lactate than Lb. buchneri. Analysis of the microbiota by 16S and ITS amplicon metasequencing demonstrated that inoculation led to lower bacterial diversity after 1 day, from 129.4 down to 40.7 observed operational taxonomic units (OTUs). Leuconostocaceae represented the dominant population by day 1, with 48.1%. Lactobacillaceae dominated the succession by day 4, with 21.9%. After 32 days, inoculation by both strains had the lowest bacterial alpha diversity level, with 29.0 observed OTUs, compared to 61.3 for the Control. These results confirm the increased fermentation efficiency when the two Lactobacillus strains are co-inoculated, which also led to a specific yeast OTUs diversity profile, with Hannaella as the main OTU.
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TL;DR
In a 64-day lab ensiling study of whole-plant corn, co-inoculation with Lactobacillus buchneri and Lactobacillus hilgardii altered bacterial and fungal succession and fermentation profiles relative to single strains or control. The combination produced a distinct yeast community dominated by Hannaella and the lowest bacterial alpha diversity, with higher lactate than Lb. buchneri alone.
Key findings
- Inoculation changed bacterial succession into three phases: Leuconostocaceae dominated by day 1 (48.1%), Lactobacillaceae dominated by day 4 (21.9%), and heterofermentative Lactobacillus succeeded from day 32. Inoculation lowered bacterial diversity after 1 day from 129.4 to 40.7 observed OTUs; after 32 days, the LB–LH combination had the lowest alpha diversity at 29.0 observed OTUs versus 61.3 for the Control.
- The LB–LH silage had a lactate:acetate ratio of 0.59 after 64 days and a higher lactate concentration than LB alone (23.8 ± 0.8 vs. 15.2 ± 0.8 g·kg−1 DM). Acetic acid at day 64 was higher in inoculated silages (LB–LH 40.4 ± 4.6, LB 40.4 ± 4.1, LH 36.0 ± 3.1 g·kg−1 DM) than Control (17.5 ± 1.6 g·kg−1 DM); Control reached a LA/(AA + EtOH) ratio of 2.67 at day 32 versus 1.05–1.58 in inoculated samples.
- Fungal succession had two main phases. At day 64, LB–LH had a distinct yeast profile with Hannaella as the main OTU (41.1 ± 2.1% relative abundance, p = 0.002 versus other treatments), while Candida dominated Control (50.2 ± 7.5%) and Dipodascus was present in LB and LH (28.3 ± 2.9% and 21.4 ± 1.0%) but nearly absent from LB–LH and Control.
- Fungal species richness at day 64 was greater in LB and LH than Control (94.3 ± 9.3 and 92.3 ± 5.7 vs. 70.0 ± 10.1 observed species; p = 0.022), with LB–LH intermediate at 86.6 ± 6.7.
Methods
- Whole-plant corn (Zea mays L. cv. P1498HR) was harvested on 2 October 2015 at 352.0 g DM·kg−1, chopped to 12.7 mm, and assigned to four treatments: Control (water), Lactobacillus buchneri NCIMB 40788 (4 × 10^5 CFU·g−1), Lactobacillus hilgardii CNCM-I-4785 (4 × 10^5 CFU·g−1), or both strains combined (2 × 10^5 CFU·g−1 each). A total of 160 vacuum-bag mini-silos were prepared, 40 per treatment, with five repetitions per treatment × time, and opened after 0, 1, 2, 4, 8, 16, 32, and 64 days at ~21 °C in the dark.
- Fermentation profiles measured pH, volatile fatty acids, lactic acid, and ethanol. DNA was extracted from repetitions 1–3 and subjected to 16S V4 and ITS1 amplicon sequencing on an Illumina MiSeq; bioinformatics included OTU clustering, taxonomy assignment, alpha diversity, weighted UniFrac and Bray–Curtis distances, PERMANOVA, edgeR differential abundance, and mixed-effect models for fermentation parameters.
Limitations
- Stated in the paper: aerobic stability was not measured; contrast analysis of low-abundance OTUs should be interpreted cautiously; the absence of Dipodascus in LB–LH and the propionic acid trends were hard to explain; fungal community mechanisms need further investigation; one 16S sample and one ITS sample were excluded because they yielded insufficient reads.
- Evident from the text: results come from one corn cultivar and harvest year in lab-scale vacuum-bag mini-silos under controlled conditions, so extrapolation to farm-scale silage, other forages, or animal performance is not established.
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- Findingown data
Corn silage inoculated with both Lb. buchneri and Lb. hilgardii had a higher concentration of lactate than silage inoculated with Lb. buchneri alone.
“and a higher concentration of lactate than Lb. buchneri.”
Quote in the paperNot a substantial claim - Findingcitation
Relative abundance of OTUs related to Leuconostocaceae was lower during days 4-16 compared to values at 1 and 2 days.
“Relative abundance of OTUs related to Leuconostocaceae was lower during this phase of fermentation compared to the observed values at 1 and 2 days of incubation”
Quote in the paperNot a substantial claim - Findingown data
Sequences affiliated to the Lactobacillales order represented only 3.2 ± 0.9% of the total population in fresh samples.
“Sequences affiliated to the Lactobacillales order represented only 3.2 ± 0.9% of the total population in the fresh samples.”
Quote in the paperNot a substantial claim - Findingown data
Inoculation led to lower bacterial diversity after 1 day, from 129.4 down to 40.7 observed OTUs.
“inoculation led to lower bacterial diversity after 1 day, from 129.4 down to 40.7 observed operational taxonomic units (OTUs).”
Quote in the paperSubstantial claim - Findingown data
LH and LB-LH treated silages had smaller proportions of Leuconostocaceae (2.8 ± 0.3% and 2.3 ± 0.2%, respectively) compared to Control (4.0 ± 0.3%) and LB (4.1 ± 0.2%) (p < 0.001 between treatments).
“LH and LB–LH treated silages had smaller proportions of this family, with 2.8 ± 0.3% and 2.3 ± 0.2%, respectively (p < 0.001 between treatments), compared to 4.0 ± 0.3% in the Control and 4.1 ± 0.2% in LB.”
Quote in the paperNot a substantial claim
- Findingown data
Leuconostocaceae represented between 60% and 100% of the fresh forage sample composition.
“with the Leuconostocaceae family representing between 60% and 100% of the fresh forage sample composition.”
Quote in the paperNot a substantial claim - Findingown data
After two days of fermentation, the diversity profiles resembled those found after 1 day.
“After two days of fermentation, the diversity profiles resembled those found after 1 day (Figure 1A).”
Quote in the paperNot a substantial claim - Findingown data
Corn silage inoculated with both Lb. buchneri and Lb. hilgardii had a lactate:acetate ratio of 0.59 after 64 days.
“Corn silage inoculated by both strains had a lactate:acetate ratio of 0.59 after 64 days”
Quote in the paperNot a substantial claim - Findingown data
Enterobacteriaceae were more abundant in LB treated samples (day 16: 33.0 ± 3.1%) than in LH treated samples (23.3 ± 2.8%).
“Enterobacteriaceae were more abundant in LB treated samples (day 16: 33.0 ± 3.1%) than in LH treated samples (23.3 ± 2.8%).”
Quote in the paperNot a substantial claim - Findingown data
After 16 days, the smallest proportion of Lactobacillus related OTUs was found in Control silages (8.3 ± 1.2%) versus 19.4 ± 1.8% (LH) to 25.3 ± 4.4% (LB-LH) in inoculated silages (p < 0.001).
“After 16 days of fermentation, the smallest proportion of Lactobacillus related OTUs was found in the Control silages (8.3 ± 1.2% in the Control versus 19.4 ± 1.8% (LH) to 25.3 ± 4.4% (LB–LH) in inoculated silages (p < 0.001)).”
Quote in the paperSubstantial claim - Findingown data
Samples of the four treatments harbored identical relative abundance of the different taxonomic orders, with slight variations in Flavobacteriales in some samples (14.6 to 20.8%).
“Samples of the four treatments harbored identical relative abundance of these different taxonomic orders, with slight variations in Flavobacteriales in some samples (14.6 to 20.8%).”
Quote in the paperNot a substantial claim - Findingown data
The PCA y-axis separated the samples according to the duration of fermentation, which explained 19.3% of the changes in diversity between the samples.
“The y-axis separated the samples according to the duration of fermentation, which explained 19.3% of the changes in diversity between the samples.”
Quote in the paperNot a substantial claim - Findingown data
Within the Proteobacteria phylum, the Enterobacteriaceae family was mainly composed of OTUs from the genera Citrobacter, Brenneria, Enterobacter, Erwinia, and Serratia.
“Within the Proteobacteria phylum, the Enterobacteriaceae family was mainly composed of OTUs from the genera Citrobacter, Brenneria, Enterobacter, Erwinia, and Serratia.”
Quote in the paperNot a substantial claim - Findingown data
Samples incubated for 4, 8, and 16 days presented a different bacterial profile from those observed at 1 and 2 days.
“Samples incubated for 4, 8, and 16 days presented a different bacterial profile from those observed at 1 and 2 days.”
Quote in the paperSubstantial claim - Findingown data
After 32 days, inoculation by both strains had the lowest bacterial alpha diversity level, with 29.0 observed OTUs, compared to 61.3 for the Control.
“After 32 days, inoculation by both strains had the lowest bacterial alpha diversity level, with 29.0 observed OTUs, compared to 61.3 for the Control.”
Quote in the paperNot a substantial claim - Findingown data
The number of OTUs affiliated to Citrobacter, Brenneria, and Erwinia was about ten times smaller in the treated samples (p < 0.001 for all three OTUs between treatments).
“The number of OTUs affiliated to these three genera was about ten times smaller in the treated samples (p < 0.001 for all three OTUs between treatments).”
Quote in the paperNot a substantial claim - Findingown data
Citrobacter (7.1 ± 0.6%), Brenneria (4.0 ± 0.5%), and Erwinia (2.2 ± 0.5%) accounted for another 13% of the population in the Control samples.
“Citrobacter (7.1 ± 0.6%), Brenneria (4.0 ± 0.5%), and Erwinia (2.2 ± 0.5%) accounted for another 13% of the population in the Control samples (Figure 1).”
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Flavobacterium and Chryseobacterium dominated fresh forage samples with means of 10.2 ± 1.4% and 7.0 ± 0.6% of total OTUs, respectively.
“The genera Flavobacterium and Chryseobacterium, belonging to the Flavobacteriales order, dominated the fresh forage samples with means of 10.2 ± 1.4% and 7.0 ± 0.6% of total OTUs, respectively.”
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Fresh corn samples immediately after inoculation were mainly composed of Proteobacteria (56.4 ± 1.5%) and Bacteriodetes (37.4 ± 1.7%).
“were mainly composed of genera belonging to Proteobacteria (56.4 ± 1.5%) orders Pseudomonadales, Xanthomonadales, and Enterobacteriales, and Bacteriodetes (37.4 ± 1.7%) orders Sphingobacteriales and Flavobacteriales.”
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Starting from day 8, the bacterial community successions were largely dominated by OTUs assigned to the Lactobacillaceae family and Lactobacillus genus.
“starting from day 8, the bacterial community successions were largely dominated by OTUs assigned to the Lactobacillaceae family (in red in Figure 1A) and Lactobacillus genus (in blue in Figure 1A).”
Quote in the paperNot a substantial claim - Findingown data
The Phylum Bacteriodetes represented only 1.3 ± 0.2% of the reads after 2 days.
“The Phylum Bacteriodetes represented only 1.3 ± 0.2% (p = 0.384) of the reads after 2 days.”
Quote in the paperNot a substantial claim - Findingown data
In the third phase, the relative abundance of Lactobacillales increased markedly in the three treated silages (up to 92.3 ± 1.6%, 94.1 ± 0.2%, and 94.4 ± 0.7% in LB, LH, and LB-LH, respectively, by day 64).
“In the third phase, the relative abundance of Lactobacillales increased markedly in the three treated silages (up to 92.3 ± 1.6%, 94.1 ± 0.2%, and 94.4 ± 0.7% in LB, LH, and LB–LH, respectively, by day 64).”
Quote in the paperSubstantial claim - Findingown data
Within 1 to 2 days of incubation, a major shift in microbial community profiles was observed, whatever the treatment.
“Within 1 to 2 days of incubation, a major shift in microbial community profiles was observed (Figure 1A), whatever the treatment.”
Quote in the paperNot a substantial claim - Findingown data
Leuconostocaceae represented the dominant population by day 1, with 48.1%.
“Leuconostocaceae represented the dominant population by day 1, with 48.1%.”
Quote in the paperNot a substantial claim - Findingown data
At days 4, 8, and 16, a major increase in the relative abundance of Lactobacillaceae members was observed, with proportions ranging from 16.4 ± 0.8% (day 4, Control) to 56.1 ± 2.2% (day 16, LH).
“At days 4, 8, and 16, a major increase in the relative abundance of Lactobacillaceae members was observed, with proportions ranging from 16.4 ± 0.8% (day 4, Control) to 56.1 ± 2.2% (day 16, LH).”
Quote in the paperSubstantial claim - Findingown data
OTUs affiliated to the Pediococcus genus were retrieved in days 4 to 16 whatever the treatment.
“OTUs affiliated to the Pediococcus genus were retrieved in this fermentation phase whatever the treatment (days 4 to 16).”
Quote in the paperNot a substantial claim - Findingown data
The Shannon diversity index was highest for the fresh maize samples, with a mean of 5.26 ± 0.27.
“The Shannon diversity index was highest for the fresh maize samples, with a mean of 5.26 ± 0.27.”
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After two days, the relative abundance of Lactobacillaceae increased from 2.6 ± 0.4% (Control) to 8.9 ± 1.4% (LB-LH) (p < 0.001).
“The main difference was the higher relative abundance of Lactobacillaceae, which increased from 2.6 ± 0.4% (Control) to 8.9 ± 1.4% (LB–LH) (p < 0.001)”
Quote in the paperSubstantial claim - Findingown data
Lactobacillaceae dominated the succession by day 4, with 21.9%.
“Lactobacillaceae dominated the succession by day 4, with 21.9%.”
Quote in the paperNot a substantial claim - Findingown data
Control samples clearly differed from the inoculated samples at 32 and 64 days of fermentation.
“The Control samples (Figure 1B) clearly differed from the inoculated samples at 32 and 64 days of fermentation”
Quote in the paperSubstantial claim - Findingown data
In the fresh samples, the majority of OTUs were affiliated to Epicoccum, Cladosporium, Giberella, Bulleromyces, Neosetophoma, and Sarocladium genera.
“In the fresh samples, the majority of OTUs were affiliated to Epicoccum, Cladosporium, Giberella, Bulleromyces, Neosetophoma, and Sarocladium genera.”
Quote in the paperNot a substantial claim - Findingown data
BLASTn analysis of the Dipodascus-affiliated OTU led to closer identity with the genus Geotrichum.
“Further analysis of the sequence of that OTU using a BLASTn search of GenBank (release 222.0) led to closer identity with the genus Geotrichum.”
Quote in the paperNot a substantial claim - Findingown data
After 64 days of fermentation, Control samples displayed higher population diversity than LB, LH, or LB-LH.
“After 64 days of fermentation, Control samples displayed higher population diversity than LB, LH, or LB–LH (Figure 3 and Figure S3).”
Quote in the paperNot a substantial claim - Findingown data
PCoA analysis from the Bray-Curtis dissimilarity index confirmed the trends observed in the heatmap.
“PCoA analysis performed from the Bray–Curtis dissimilarity index (Figure 4B) confirmed the trends observed in the heatmap (Figure 5 and Figure S2).”
Quote in the paperNot a substantial claim - Findingown data
For LB-LH, the three OTUs identified by contrast analysis were LH-LD-LF (putatively Lb. hilgardii), Lb. buchneri, and Lb. helveticus.
“For LB–LH, the three OTUs identified by the contrast analysis were LH-LD-LF (putatively Lb. hilgardii), Lb. buchneri (280 bp, % identify 100.00), and Lb. helveticus (251 bp, % identify 96.02).”
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Inoculated LB and LH samples had 9.3 ± 3.1% and 12.9 ± 2.5% Candida OTUs, respectively (p < 0.001).
“The inoculated LB samples had 9.3 ± 3.1% and 12.9 ± 2.5% for LH (p < 0.001) of Candida OTUs.”
Quote in the paperSubstantial claim - Findingown data
Inoculation with the obligate heterofermentative strains led to significant differences from the Control at day 64.
“Inoculation with the obligate heterofermentative strains led to significant differences from the Control at day 64.”
Quote in the paperSubstantial claim - Findingown data
The main yeast genera were Candida, Dipodascus, Hannaella, Hanseniaspora, Kazachstania, and Metschnikowia.
“The main yeast genera were Candida, Dipodascus, Hannaella, Hanseniaspora, Kazachstania, and Metschnikowia (alphabetical order).”
Quote in the paperNot a substantial claim - Findingown data
The two OTUs linked to LH were LH-LD-LF and Lb. helveticus.
“The two OTUs linked to LH were LH-LD-LF and Lb. helveticus.”
Quote in the paperNot a substantial claim - Findingown data
Sarocladium were present throughout the fermentation period at abundance ranging from 1.0 ± 0.1% (Control, day 64) to 15.7 ± 2.5% (LB, day 2).
“The Sarocladium were present throughout the fermentation period at abundance ranging from 1.0 ± 0.1% (Control, day 64) to 15.7 ± 2.5% (LB, day 2).”
Quote in the paperNot a substantial claim - Findingown data
Throughout the second fungal succession phase, the relative abundance of Candida and Hannaella increased up to 45% of total OTUs in LB and LB-LH treated silages after 32 days.
“Throughout this second phase, the relative abundance of the yeasts Candida and Hannaella increased up to 45% of the total OTUs in LB (22.5 ± 10.7% Candida, 21.6 ± 4.7% Hannaella) and LB–LH (17.5 ± 7.6% Candida, 28.4 ± 20.2% Hannaella) treated silages after 32 days.”
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When comparing Control and LB microbiota, several OTUs affiliated as Lactobacillus were more abundant in LB, including Lb. buchneri, Lb. ingluviei, Lb. pentosiphilus, Lb. harbinensis, and Lb. brevis.
“When we compared Control and LB microbiota (Figure 3), several OTUs affiliated as Lactobacillus were more abundant in LB, including Lb. buchneri, but also Lb. ingluviei, Lb. pentosiphilus, Lb. harbinensis, and Lb. brevis.”
Quote in the paperNot a substantial claim - Findingown data
Two OTUs affiliated to the genus Stenotrophomonas were specific to LB.
“Two OTUs affiliated to the genus Stenotrophomonas were specific to LB.”
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An OTU affiliated as Dipodascus was present in LB and LH in nearly 28.3 ± 2.9% and 21.4 ± 1.0% of total sequences, respectively.
“An OTU affiliated as Dipodascus was present in LB and in LH in nearly 28.3 ± 2.9% and 21.4 ± 1.0%, respectively, of total sequences.”
Quote in the paperNot a substantial claim - Findingown data
The fungal succession pattern was less distinct than that of bacteria.
“Although major modifications of the fungal community were observed during fermentation, the fungal succession pattern was less distinct than that of bacteria (Figure 4A,B).”
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The OTU (253 bp, % identity 100.00) with the highest logFC value (−8.69) was assigned to Bacillus pumilus or Bacillus safensis.
“The OTU (253 bp, % identity 100.00) with the highest logFC value (−8.69) was assigned to Bacillus pumilus or Bacillus safensis.”
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The Candida-related OTU dominated the Control treatment after 64 days of ensiling, with 50.2 ± 7.5% relative abundance.
“The OTU related to Candida clearly dominated the Control treatment after 64 days of ensiling, with 50.2 ± 7.5% of the relative abundance.”
Quote in the paperSubstantial claim - Findingown data
The highest scoring hits against the sequence of this OTU (303 bp, % identity <99.26) were affiliated to either Lb. hilgardii, Lb. diolivorans, or Lb. farraginis (LH-LD-LF).
“The highest scoring hits against the sequence of this OTU (303 bp, % identity <99.26) were affiliated to either Lb. hilgardii, Lb. diolivorans, or Lb. farraginis (LH-LD-LF) following a BLAST search.”
Quote in the paperNot a substantial claim - Findingown data
After 64 days of fermentation, differences between treatments were related to the presence of certain yeast genera.
“After 64 days of fermentation, specific patterns were visible between treatments. The differences were related to the presence of certain yeast genera.”
Quote in the paperNot a substantial claim - Findingown data
When comparing LB and LB-LH, some OTUs were more abundant in LB, including OTUs related to Lb. ingluviei, Lb. kimchicus, Lb. harbinensis, and Lb. brevis.
“When we compared LB and LB–LH, some of the previously discussed OTUs were more abundant in LB, including OTU related to Lb. ingluviei (252 bp, % identify 98.41), Lb. kimchicus (272 bp, % identify 99.62), Lb. harbinensis (251 bp, % identify 99.60), and Lb. brevis (293 pb, % identity 99.63).”
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Inoculation with LH either alone or combined with LB led to a reduced set of differentially abundant OTUs versus Control (three in LB-LH samples and two in LH samples).
“Inoculation with LH either alone or combined with LB led to a reduced set of differentially abundant OTUs versus Control (three in LB–LH samples and two in LH samples).”
Quote in the paperNot a substantial claim - Findingown data
The main difference between treatments was clearly lactic acid and acetic acid concentrations.
“The main difference between treatments was clearly lactic acid and acetic acid concentrations (Table 1, Figure 7B,C).”
Quote in the paperNot a substantial claim - Findingnone given
Following inoculation, 1,2-propanediol concentration increased irrespective of the strain.
“Conversely, following inoculation, the concentration of 1,2-propanediol increased irrespective of the strain.”
Quote in the paperNot a substantial claim - Findingown data
Leuconostocaceae still represented around 4% of the population in Control and LB treated silage at the end of the second bacterial population succession, after 16 days of fermentation.
“Although Leuconostocaceae species have been reported to be more sensitive to low pH [7], they still represented around 4% of the population in the Control and LB treated silage at the end of the second bacterial population succession, after 16 days of fermentation.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [7] Buxton, D.R., Muck, R.E., and Harrison, J.H. (2003). Microbiology of ensiling. Silage science and technology, American Society of Agronomy. source
Not checked in the free run.
- Findingown data
At day 64, the Kazachstania OTU ratio increased to a mean of 9.8 ± 1.1% (p = 0.222 between treatments).
“At day 64, the Kazachstania OTU ratio increased to a mean of 9.8 ± 1.1% (p = 0.222 between treatments).”
Quote in the paperNot a substantial claim - Findingown data
After 64 days, LB-LH treated silages harbored a distinctive yeast community, with Hannaella as the main OTU.
“after 64 days of fermentation, the LB–LH treated silages harbored a distinctive yeast community, with Hanaella as the main OTU.”
Quote in the paperSubstantial claim - Findingown data
Lactic acid concentration was similar between inoculated samples and the Control up to 16 days of incubation.
“Lactic acid concentration was similar between inoculated samples and the Control up to 16 days of incubation.”
Quote in the paperNot a substantial claim - Findingown data
Significant differences in fermentation profiles were associated with each inoculant.
“Significant differences in fermentation profiles were associated with each inoculant, and changes in fungal communities will need further investigation to understand the mechanisms of action of the bacterial inoculants, especially the combination LB–LH.”
Quote in the paperSubstantial claim - Findingown data
In LB, lactic acid dropped to 15.2 ± 0.8 g/kg DM by day 64.
“In LB, it dropped to 15.2 ± 0.8 g lactic acid·kg−1 DM by day 64 (Figure 6B).”
Quote in the paperSubstantial claim - Findingown data
Propionic acid concentration in LB-LH was only about half that obtained in LB alone after 64 days.
“The concentration of propionic acid in LB–LH was only about half that obtained in LB alone after 64 days of fermentation.”
Quote in the paperNot a substantial claim - Findingown data
In Control silages, concentrations of 1,2-propanediol, 1-propanol, and propionic acid remained below detection levels throughout the 64-day trial.
“In the Control silages, concentrations of these three compounds remained below detection levels throughout the 64-day period of the trial (Figure 7).”
Quote in the paperNot a substantial claim - Findingown data
After 64 days, lactic acid concentration in LH treated samples was 35.0 ± 1.2 g/kg DM, close to the Control.
“After 64 days of incubation, the lactic acid concentration in the LH treated samples was 35.0 ± 1.2 g·kg−1 DM, close to the concentration measured in the Control.”
Quote in the paperSubstantial claim - Findingown data
After 64 days, bacterial alpha diversity was 61.5 ± 6.6 species in Control and decreased to 28.3 ± 2.95 in LB-LH samples (p < 0.001).
“We noticed that after 64 days of fermentation, bacterial alpha diversity was 61.5 ± 6.6 species in the Control and decreased to 28.3 ± 2.95 in LB–LH samples (p < 0.001) (Figure S3).”
Quote in the paperSubstantial claim - Findingown data
At the last opening, lactate concentration in LB-LH treated silages was 23.8 ± 0.8 g/kg DM, between the values measured when LB or LH were inoculated independently.
“At the last opening, the concentration of lactate in the LB–LH treated silages, 23.8 ± 0.8 g·kg−1 DM, was between the values measured when LB or LH were inoculated independently.”
Quote in the paperNot a substantial claim - Interpretationown data
Co-inoculation of the two Lactobacillus strains increased fermentation efficiency.
“These results confirm the increased fermentation efficiency when the two Lactobacillus strains are co-inoculated”
Quote in the paperSubstantial claim - Interpretationown data
The comparison of the relative abundance of Lactobacillales could explain part of the observed difference between LB and Control.
“The comparison of the relative abundance of Lactobacillales could explain part of the observed difference”
Quote in the paperNot a substantial claim - Interpretationown data
The succession of the bacterial population slowed down after 16 days of fermentation.
“indicating that the succession of the bacterial population slowed down after 16 days of fermentation.”
Quote in the paperSubstantial claim - Interpretationcitation
Differences in key yeast genera between published reports and this study are likely partly due to different methods of identification.
“The differences in key genera between published reports, and also from our study, are likely partly due to the different methods of identification used, as pointed out by Dunière et al. [33] in the case of fungal populations.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [33] Dunière, L., Xu, S., Long, J., Elekwachi, C., Wang, Y., Turkington, K., Forster, R., and McAllister, T.A. (2017). Bacterial and fungal core microbiomes associated with small grain silages during ensiling and aerobic spoilage. BMC Microbiology., 17. source
Not checked in the free run.
- Premisecitation
Analyzing the ratio of lactic acid to acetic acid and ethanol concentrations gives a more precise picture of fermentation profiles between homofermentative and heterofermentative LAB populations.
“Analyzing the ratio of lactic acid to acetic acid and ethanol concentrations (LA/(AA + EtOH)) (Figure 7A) gave a more precise picture of the fermentation profiles between the homofermentative and heterofermentative lactic acid bacteria populations [64].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [64] Kandler, 1983, Carbohydrate metabolism in lactic acid bacteria, Antonie van Leeuwenhoek source
Not checked in the free run.
- Interpretationown data
In Control samples, the LA/(AA + EtOH) ratio started to decrease by day 64, indicating a putative succession toward heterofermentative processes.
“In Control samples, the ratio started to decrease by day 64, indicating a putative succession of the microbiota toward heterofermentative processes.”
Quote in the paperNot a substantial claim - Interpretationcitation
These species could have contributed to the conversion of lactate to acetate in LB.
“These species could have contributed to the conversion of lactate to acetate in LB [61].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [61] Krooneman, 2001, Anaerobic conversion of lactic acid to acetic acid and 1,2-propanediol by Lactobacillus buchneri, Appl. Environ. Microbiol. source
Not checked in the free run.
- Premisecitation
In a trial on whole plant corn ensiled at 363 g/kg dry matter, acetic acid concentrations at 64 days correspond to the level reported at 250 days of incubation by Ferrero et al. [57].
“When comparing the same treatments with a trial on whole plant corn ensiled at 363 g·kg−1 dry matter, the concentrations of acetic acid at 64 days correspond to the level reported by 250 days of incubation in Ferrero et al. [57].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [57] Ferrero, 2019, Effects of conservation period and Lactobacillus hilgardii inoculum on the fermentation profile and aerobic stability of whole corn and sorghum silages, J. Sci. Food Agric. source
Not checked in the free run.
- Interpretationown data
Differences in lactate and acetate concentrations between treated silages could influence both bacterial and fungal communities.
“Differences in lactate and acetate concentrations between treated silages could influence both bacterial and fungal communities, and after 64 days of fermentation, the LB–LH treated silages harbored a distinctive yeast community, with Hanaella as the main OTU.”
Quote in the paperSubstantial claim - Interpretationown data
The differences between LB-LH and Control are similar in both studies.
“The differences between LB–LH and the Control in both studies is similar.”
Quote in the paperNot a substantial claim - Interpretationown data
The LB-LH combination brings specific changes that are distinct from the sum of the individual impacts of LB and LH on the microbial communities.
“The LB–LH combination brings specific changes that are distinct to the sum of their individual impact on the microbial communities.”
Quote in the paperSubstantial claim - Premisecitation
The LB-LH combination has been shown to improve aerobic stability in another study using the same forage.
“Although aerobic stability was not measured in our study, the LB–LH combination has been shown to improve aerobic stability in another study using the same forage [57]”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [57] Ferrero, 2019, Effects of conservation period and Lactobacillus hilgardii inoculum on the fermentation profile and aerobic stability of whole corn and sorghum silages, J. Sci. Food Agric. source
Not checked in the free run.
- Interpretationown data
At the genus level, the difference in Saccharomycetales abundance was associated with a decrease in Candida-related OTUs in the inoculated samples.
“At the genus level, this difference was associated with a decrease in Candida related OTUs in the inoculated samples.”
Quote in the paperNot a substantial claim - Premisecitation
At low pH, increased acetic acid could create a stressful environment for most microorganisms because its higher pKa (4.76) compared to silage pH allows nearly all acetate to be undissociated.
“At low pH, an increase in acetic acid could create a stressful environment for most microorganisms, as the higher pKa of acetic acid (4.76) compared to the pH of the silage allows nearly all acetate to be in its undissociated form [67].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [67] Russell, 1997, The effects of fermentation acids on bacterial growth, Adv. Microb. Physiol. source
Not checked in the free run.
- Interpretationown data
Changes in pH and organic acids followed the rapid succession of Eubacteria observed within the first 2 days of fermentation.
“Changes in pH and in organic acids followed the rapid succession of Eubacteria observed within the first 2 days of fermentation (Figure 6A).”
Quote in the paperNot a substantial claim - Interpretationreasoning
The lower 1,2-propanediol concentration with LB was possibly due to transformation into propionic acid, whose concentration concomitantly increased.
“The lower concentration of 1,2-propanediol with LB was possibly due to transformation into propionic acid, whose concentration concomitantly increased (Figure 7D).”
Quote in the paperNot a substantial claim - Interpretationown data
The initial pH drop could result from the activity of Leuconostoc, Lactococcus, and Enterobacter, since they collectively represented the dominant OTUs during this period.
“could result from the activity of Leuconostoc, Lactococcus, and Enterobacter, since they collectively represented the dominant OTUs during this period.”
Quote in the paperNot a substantial claim - Interpretationreasoning
The strong decrease in observed species in silages inoculated with combined LB and LH could be related to accumulation of organic acids, particularly lactic and acetic acid, whose concentrations increased in those samples.
“The strong decrease in the number of observed species in silages inoculated with combined LB and LH could be related to the accumulation of organic acids, in particular of lactic and acetic acid whose concentrations increased in those samples.”
Quote in the paperSubstantial claim
- May combine two claims. 81
- The quote only partly states this claim. 2
- Classified as probably not a substantial claim. 46
May combine two claims.
Findingown dataThe PCA x-axis accounted for 67.6% of the observed differences and showed the shift in population between the three main periods, days 1 and 2, days 4 to 16, and days 32 to 64.
“The x-axis accounted for 67.6% of the observed differences and showed the shift in population between the three main periods, days 1 and 2, days 4 to 16, and days 32 to 64.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataLactococcus represented a higher proportion in LB samples on day 4 (14.4 ± 1.3%, p < 0.001) and still a substantial proportion at day 8 (6.1 ± 1.9%, p = 0.009).
“Lactococcus represented a higher proportion of the population in LB samples on day 4 (14.4 ± 1.3%, p < 0.001), and still represented a substantial proportion of the diversity in LB samples at day 8 (6.1 ± 1.9%, p = 0.009).”
Quote in the paperNot a substantial claimThe quote only partly states this claim.
Findingown dataIn Control silages, Lactobacillales related OTUs represented only 74.8 ± 2.4% by day 64 (p < 0.001 between treatments).
“The increase was not observed in the Control silages, in which Lactobacillales related OTUs represented only 74.8 ± 2.4% (p < 0.001 between treatments).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataCo-inoculation led to a specific yeast OTUs diversity profile, with Hannaella as the main OTU.
“which also led to a specific yeast OTUs diversity profile, with Hannaella as the main OTU.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataDuring fermentation, bacterial succession could be grouped into three phases: first few days with Leuconostocaceae dominant; day 4 to 16 with Lactobacillaceae; from day 32 with heterofermentative Lactobacillus OTUs.
“During the fermentation period, bacterial succession could be grouped in three phases (Figure 1). The first phase covered the first few days of fermentation with Leuconostocaceae as the dominant OTU. The second phase, from day 4 to 16, was defined by OTUs related to Lactobacillaceae. The third phase, from day 32, was characterized by the succession of heterofermentative Lactobacillus OTUs.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataWithin Firmicutes, the families Leuconostocaceae and Streptococcaceae accounted for respectively 44-52% and 7-11% of the total population of the different silages.
“Within Firmicutes, the families Leuconostocaceae and Streptococcaceae accounted for respectively 44–52% and 7–11% of the total population of the different silages.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataAt days 4, 8, and 16, Lactobacillus still represented a small fraction of the community, but unassigned OTUs affiliated to Lactobacillales or Lactobacillaceae were more abundant.
“Lactobacillus still represented a small fraction of the community, but unassigned OTUs affiliated to Lactobacillales or Lactobacillaceae were more abundant.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataIn Control samples, Lactococcus slowly disappeared during days 4-16, and by day 8 represented only a minor fraction of the community.
“In the Control samples, Lactococcus slowly disappeared during this period, and by day 8, they represented only a minor fraction of the community.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataIn that period, Firmicutes became dominant with 56-66% of the sequences, followed by Proteobacteria (31-44%, with Enterobacteriaceae 30-41%).
“In that period, Firmicutes became dominant with 56–66% of the sequences, followed by Proteobacteria (31–44%, with Enterobacteriaceae with 30–41% of the sequences).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataLeuconostoc was still present in the Control at the last opening, with 8.6 ± 1.2% relative abundance, along with unassigned Leuconostocaceae (12.9 ± 1.6% versus a mean of 1.0% in the treated samples, p < 0.001).
“Leuconostoc was still present in the Control at the last opening, with 8.6 ± 1.2% of the relative abundance, along with unassigned Leuconostocaceae (12.9 ± 1.6% versus a mean of 1.0% in the treated samples, p < 0.001).”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Findingown dataAdditional microbial community profiles from fresh corn samples taken one month prior to ensiling were consistent with the results for fresh forage.
“Additional microbial community profiles from fresh corn samples taken one month prior to ensiling were consistent with our results for fresh forage (see Figure S1).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataAt day 16, the proportion of Citrobacter was 9.9% to 14.8% (p = 0.077 between treatments), often higher than earlier in the ensiling process.
“the proportion of Citrobacter was often higher (day 16: 9.9% to 14.8%, p = 0.077 between treatments) than earlier in the ensiling process.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataPERMANOVA analysis showed that treatments, opening periods, and the interaction treatments:openings were significant at p < 0.001 for the 16S amplicons.
“Results from a PERMANOVA analysis show that the treatments, opening periods, and the interaction treatments:openings were significant, at p < 0.001, for the 16S amplicons.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Findingnone givenStreptococcaceae OTUs were related to the genus Lactococcus.
“Streptococcaceae OTUs were related to the genus Lactococcus.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataBacterial richness dropped after ensiling, then increased during the transition from Leuconostocaceae to Lactobacillaceae, and then dropped again toward the transition to heterofermentative LAB strains.
“we observed that bacterial richness dropped after ensiling, then increased during the transition from Leuconostocaceae to the Lactobacillaceae, and then dropped again toward the transition to the heterofermentative LAB strains (Figure S3).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataAfter two days, Lactobacillus abundance was 5.2 ± 1.1% in LH and 7.5 ± 1.3% in LB-LH (p < 0.001 between the four treatments).
“with abundance of 5.2 ± 1.1% and 7.5 ± 1.3%, respectively (p < 0.001 between the four treatments).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataAt day 16, OTUs linked to the genus Brenneria were found in all inoculated silage samples, with LB and LB-LH having the highest proportion (7.3 ± 1.2% to 9.0 ± 1.2%), and LH and Control the lowest (~5%) (p = 0.012).
“at day 16, OTUs linked to the genus Brenneria (Enterobacteriaceae) were found in all inoculated silage samples, with LB and LB–LH having the highest proportion (7.3 ± 1.2% to 9.0 ± 1.2%, respectively), and LH and the Control having the lowest (~5%) (p = 0.012).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataEpicoccum completely disappeared in the first day of ensiling, while Neosetophoma and Peyronellaea became the dominant genera after 1 and 2 days, respectively.
“The genus Epicoccum completely disappeared in the first day of ensiling, while Neosetophoma (1 day: ranging from 15.9 to 23.7%; 2 days: ranging from 15.1 to 17.8%) and Peyronellaea (1 day: 3.4 to 10.5%; 2 days: 12.7 to 22.1%) became the dominant genera after 1 and 2 days, respectively.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataPERMANOVA showed that treatments, opening periods, and the interaction treatments:openings were significant (p < 0.001) for the ITS amplicons.
“Results from a PERMANOVA analysis show that the treatments, opening periods, and the interaction treatments:openings were significant (p < 0.001) for the ITS amplicons.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe LH-LD-LF related OTU was also observed in LB-LH or LH at day 32, and at a lower intensity at day 64.
“The LH-LD-LF related OTU was also observed in LB–LH or LH at day 32, and at a lower intensity at day 64.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataTwo main phases were observed in fungal succession, and an increase in the yeast population, with final high abundance of Candida, Dipodascus, or Hannaella, were the main changes.
“Two main phases were observed, and an increase in the yeast population, with the final high abundance of Candida, Dipodascus, or Hannaella, were the main changes in this succession.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThe OTU related to Lb. brevis was generally absent from the LB-LH and LH treatments, while the OTU related to Lb. helveticus was absent from LB but present in LH.
“The OTU related to Lb. brevis (293 bp, % identify 99.63) was generally absent from the LB–LH and LH treatments, while OTU related to Lb. helveticus was absent from LB but present in LH.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataDiscriminant analysis showed that microbial succession followed similar trends in LB-LH and LH, but was more distinct between LB and Control.
“The results of the analysis showed that microbial succession followed similar trends in LB–LH and LH, but was more distinct between LB and Control.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThe Dipodascus-associated OTU was almost absent from LB-LH and Control at day 64 (0.10 ± 0.01% and 0.08 ± 0.01% relative abundance), while at day 2 it was present in all four treatments (10.0 ± 2.2% to 13.8 ± 2.8%).
“Interestingly, the OTU associated with Dipodascus was almost absent from LB–LH and Control samples at day 64 (0.10 ± 0.01% and 0.08 ± 0.01% of the relative abundance), while at day 2, it was present in all four treatments (10.0 ± 2.2% to 13.8 ± 2.8%).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataSeveral OTUs related to Lactobacillales were more abundant in the Control samples, as well as OTUs related to Burkholderiales and Pseudomonadales.
“Several OTUs related to Lactobacillales were more abundant in the Control samples, as well as OTUs related to Burkholderiales and Pseudomonadales.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataKazachstania was the dominant yeast genus after four and eight days of fermentation, but subsequently decreased in abundance in all but the Control samples.
“Kazachstania was the dominant yeast genus after four (7.0 to 16.6%) and eight (9.4 to 20.7%) days of fermentation, but subsequently decreased in abundance in all but the Control samples.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Findingnone givenIt was not possible to link the absence of Dipodascus to the enrichment of another fungal OTU.
“It was not possible to link the absence of Dipodascus to the enrichment of another fungal OTU.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThree OTUs related to LH-LD-LF were observed in the Control vs LB comparison, one of which may be related to Lb. diolivorans.
“Three OTUs related to LH-LD-LF were also observed, one of which may be related to Lb. diolivorans.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThe second fungal succession phase extended from day 4 to day 32 and corresponded to an increase in yeast-related OTUs.
“The second fungal succession phase extended from day 4 to day 32 and corresponded to an increase in yeast related OTUs.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThe PCoA x-axis explained 40.4% of the difference and separated samples by fermentation time into three groups: fresh, day 1-2, and days 4-64.
“The x-axis explained 40.4% of the difference and allowed for a separation of the samples in relation with fermentation time into three groups, the first containing fresh samples, the second containing day 1 and day 2 groups, and the third containing all later ensiling time points (days 4 to 64).”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Findingown dataTaxonomic identification of one key OTU pointed to several species.
“Taxonomic identification of one key OTU pointed to several species.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataAlthough Control silages reached a pH comparable to treated samples, they had a lower acetic acid concentration at 64 days.
“Although the Control silages reached a pH comparable to that of the treated samples, they had a lower concentration of acetic acid at 64 days of fermentation.”
Quote in the paperSubstantial claimMay combine two claims.
FindingcitationThe significant drop in lactic acid was not observed in LH samples, even though Lb. hilgardii is an obligate heterofermentative LAB.
“The significant drop in lactic acid was not observed in LH samples, even though Lb. hilgardii is an obligate heterofermentative LAB [60].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [60] Holzapfel, W.H., and Wood, B.J.B. (2014). The genus Lactobacillus. Lactic acid bacteria: Biodiversity and taxonomy, John Wiley & Sons. source
Not checked in the free run.
May combine two claims.
Findingown dataAfter 16 days, lactic acid remained at slightly more than 40 g/kg DM in Control samples but dropped in treated silages.
“Subsequently, while the concentration remained at slightly more than 40 g lactic acid·kg−1 DM in the Control samples, it dropped in the treated silages.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataFollowing linear modeling of pH interactions between time and treatments, p values were all over 0.5, so the four pH curves showed a similar profile.
“Following linear modeling of the pH interactions between time and treatments, the p values were all over 0.5, so the four pH curves showed a similar profile (Table 1).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataAcetic acid differences were already observed after day 2 and were significant at day 8 (p < 0.001, SEM = 0.77), with 10.9 ± 1.3 g/kg DM for Control and 13.3, 13.8, and 19.8 g/kg DM for LB-LH, LB, and LH, respectively.
“Differences were already observed after the second day of fermentation, and significant differences were observed at day 8 (p < 0.001, SEM = 0.77, with 10.9 ± 1.3 g·kg−1 DM for Control and 13.3, 13.8, and 19.8 g·kg−1 DM acetic for LB–LH, LB, and LH, respectively).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataAfter 64 days, observed fungal species in LB and LH were greater than in the Control (p = 0.022), with 70.0 ± 10.1, 94.3 ± 9.3, 92.3 ± 5.7, and 86.6 ± 6.7 observed species in Control, LB, LH, and LB-LH, respectively.
“After 64 days of fermentation, the observed fungal species in LB and LH were greater than in the Control (p = 0.022), with 70.0 ± 10.1, 94.3 ± 9.3, 92.3 ± 5.7, and 86.6 ± 6.7 observed species in the Control, LB, LH, and LB–LH treated silages).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThe LB-LH treatment produced an intermediate or delayed response.
“The LB–LH treatment produced an intermediate or delayed response.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataLactate accumulation was strongly similar between LB-LH and LB in several of the seven openings, mainly differing at day 64 (p < 0.001 between treatments).
“This slight difference characterized the strong similarity in lactate accumulation between LB–LH and LB in several of the seven openings, which mainly differed at day 64 (Figure 6, p < 0.001 between treatments).”
Quote in the paperNot a substantial claimMay combine two claims.
FindingcitationAcetic acid concentration differed between the three treatments and Control (p < 0.001) during incubation, but was within expected values for corn silage.
“The concentration of acetic acid differed between the three treatments and the Control samples (p < 0.001) (Table 1, Figure 6C) during the incubation period, but was within the expected values for corn silage [62].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [62] Kung, 2018, Silage Review: Interpretation of Chemical, Microbial, and Organoleptic Components of Silages, J. Dairy Sci. source
Not checked in the free run.
May combine two claims.
Findingown dataIn Control, rapid lactic acid accumulation increased the LA/(AA + EtOH) ratio up to 2.67 after 32 days, significantly different (p < 0.001) from inoculated samples (1.05 to 1.58), but in line with published results for homofermentative populations.
“In the Control samples, as mentioned earlier, rapid accumulation of lactic acid was observed, triggering an increase in the LA/(AA + EtOH) ratio, up to 2.67 after 32 days, which differed significantly (p < 0.001) from the ratios calculated for the inoculated samples, between 1.05 to 1.58, but were in line with published results [65] for homofermentative populations at that period [66] (Table 1).”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [65] Filya, 2010, The effects of lactic acid bacteria on the fermentation, aerobic stability and nutritive value of maize silage, Grass Forage Sci. source
Not checked in the free run.
- cites [66] Schmidt, 2010, The effect of Lactobacillus buchneri with or without a homolactic bacterium on the fermentation and aerobic stability of corn silages made at different locations, J. Dairy Sci. source
Not checked in the free run.
May combine two claims.
Findingown dataTremellales were more abundant in LB-LH treated silage than in other silages, with Hannaella as the dominant genus in this family, at 41.1 ± 2.1% of total abundance (p = 0.002 versus other treatments).
“Tremellales were also more abundant in LB–LH treated silage than in the other silages (OTUs of Hannaella were the dominant genus in this family), with 41.1 ± 2.1% of the total abundance (p = 0.002 versus other treatments).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataAs pH reached its lowest value, a mean of 3.77 ± 0.01 (p < 0.001 between treatments) after 8 days, earlier colonizing species were replaced by Lactobacillaceae.
“As the pH reached its lowest value, i.e., a mean of 3.77 ± 0.01 (p < 0.001 between treatments) after 8 days of fermentation, the earlier colonizing species were replaced by Lactobacillaceae.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThe initial pH drop reached a mean of 5.01 ± 0.05 (p = 0.008) after 1 day and 4.24 ± 0.01 (p = 0.070 between treatments) after 2 days.
“The initial drop in pH, down to a mean of 5.01 ± 0.05 (p = 0.008) and 4.24 ± 0.01 (p = 0.070 between treatments) after 1 and 2 days, respectively”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataKazachstania sequences were abundant after 4 and 8 days of fermentation, with the highest relative abundance of 20.7 ± 3.4% in the Control at day 8.
“Sequences affiliated with the yeast genus Kazachstania were abundant in the fungal community after 4 and 8 days of fermentation, with highest relative abundance of 20.7 ± 3.4% for the Control at day 8.”
Quote in the paperNot a substantial claimMay combine two claims.
FindingreasoningAlpha diversity in Control increased from a low of 47.7 ± 3.5 observed species at day 16, while in inoculation treatments it decreased after that period.
“Our results confirm this hypothesis, since alpha diversity in the Control samples increased from a low of 47.7 ± 3.5 observed species at day 16, while, in the inoculation treatments, it decreased after that period.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe Kazachstania population subsequently decreased in all treatments until by day 32 it represented 8.2 ± 2.4% in the Control and 3.2 ± 1.8% in LB-LH (p = 0.038).
“This population subsequently decreased in all treatments until, by day 32, it represented only a low ratio of the total population, 8.2 ± 2.4% in the Control and 3.2 ± 1.8% of the OTUs in LB–LH (p = 0.038).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataAfter 64 days, 1,2-propanediol continued to increase in LH and LB-LH treated silages, whereas it started to decrease in LB, leading to a significant difference between treatments (p < 0.001).
“After 64 days of fermentation, the concentration of 1,2-propanediol continued to increase in LH and LB–LH treated silages, whereas it started to decrease in LB, leading to a significant (p < 0.001) difference between treatments at this time.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe LA/(AA + EtOH) ratio for LB-LH was similar to LB at all time points, although lactic and acetic acid concentrations were always higher in LB-LH at the later opening.
“Interestingly, the LA/AA + EtOH ratio for LB–LH was similar to LB at all time points, although the concentrations of both lactic and acetic acid were always higher in LB–LH at the later opening.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataControl was dominated by Saccharomycetales (68.4 ± 1.7%), LB-LH had the lowest abundance of that order (22.0 ± 5.1%), and LB and LH had 49.8 ± 1.5% and 47.4 ± 3.0%, respectively (p < 0.001 between treatments).
“While the Control was dominated by Saccharomycetales (68.4 ± 1.7% relative abundance), LB–LH treated silage had the lowest abundance of OTUs related to that order (22.0 ± 5.1%), and 49.8 ± 1.5% and 47.4 ± 3.0% of relative diversity were observed in LB and LH treated silage samples, respectively (p < 0.001 between treatments).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataAfter 64 days, acetic acid in LB was 40.4 ± 4.1 g/kg DM, similar to LB-LH and LH at 40.4 ± 4.6 and 36.0 ± 3.1 g/kg DM, respectively (p < 0.001, SEM = 2.28).
“After 64 days of incubation, the concentration of acetic acid in LB was 40.4 ± 4.1 g·kg−1 DM, similar to that in the LB–LH and LH treatments, with 40.4 ± 4.6 and 36.0 ± 3.1 g·kg−1 DM, respectively (p < 0.001, SEM = 2.28).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataProduction of 1-propanol and propionate was mostly influenced by Lb. buchneri, while Lb. hilgardii treatments had only a minor influence on this metabolism.
“The production of 1-propanol (Figure 7C) and propionate (Figure 7D) were mostly influenced by the presence of Lb. buchneri, and treatments with Lb. hilgardii had only a minor influence on this metabolism.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataControl samples had a higher abundance of unidentified Lactobacillaceae and Lactobacillales, which were not necessarily replaced by OTUs affiliated to Lactobacillus.
“According to the diversity data, Control samples had a higher abundance of unidentified Lactobacillaceae and Lactobacillales (Figure 1), which were not necessarily replaced by OTUs affiliated to Lactobacillus.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataIn separate LB and LH inoculated silages, Dipodascus occupied this niche, and Candida dominated Control samples.
“In the separate LB and LH inoculated silages, Diplodascus occupied this niche, and Candida dominated the Control samples.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
FindingcitationAcetic acid in Control after 64 days was 17.5 ± 1.6 g/kg DM, in the range of published reports.
“The concentration of acetic acid in the Control samples after 64 days of fermentation was 17.5 ± 1.6 g·kg−1 DM, i.e., in the range of published reports [5].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [5] Oliveira, 2017, Meta-analysis of effects of inoculation with homofermentative and facultative heterofermentative lactic acid bacteria on silage fermentation, aerobic stability, and the performance of dairy cows, J Dairy Sci. source
Not checked in the free run.
May combine two claims.
Findingown dataAmplicon metasequencing over fermentation revealed three distinct community profiles from 16S amplicons and two from ITS amplicons.
“Using amplicon metasequencing analysis of the microbial communities over the course of fermentation revealed three distinct community profiles from the 16S amplicons, and two from the ITS amplicons.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataLB treated silage harbored a higher diversity of LAB, mainly obligate heterofermentative species, including Lb. brevis- and Lb. ingluviei-related OTUs.
“As shown by the contrast analysis, LB treated silage harbored a higher diversity of LAB, mainly obligate heterofermentative species, including Lb. brevis- and Lb. ingluviei-related OTUs.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThe mixed-effect model indicated a significant difference in the lactic acid curve in LB compared to Control, while the difference between LB-LH and Control was not significant.
“The results of the mixed-effect model (time × treatment) indicated a significant difference in the lactic acid curve in LB compared to the Control, while the difference between LB–LH and the Control was not significant (Table 1).”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Premisecitation1,2-propanediol is synthesized by certain species, e.g., Lb. buchneri, and improves aerobic stability.
“Other molecules, including 1,2-propanediol are synthesized by certain species, the obligate heterofermentative Lactobacillus buchneri for example, and they improve aerobic stability [9].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [9] Muck, 2018, Silage Review: Recent advances and future uses of silage additives, J. Dairy Sci. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Study design and conductown dataOne sample from the 16S dataset (LB-LH, day 16) and one sample from the ITS dataset (control day 64) failed to give enough reads and were excluded from analyses.
“One sample from the 16S dataset (LB–LH, day 16 experimental condition) and one sample from the ITS dataset (control day 64 experimental condition) failed to give enough reads for downstream analyses and were therefore excluded from our analyses.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationBrusetti et al. observed a population shift from Pediococcus and Weissella on the first days of fermentation to Enterobacter as the dominant species after 30 days in corn silage.
“After 1, 2, 6, 13, 20, and 30 days of fermentation, they observed a population shift from Pediococcus and Weissella on the first days of fermentation to Enterobacter as the dominant species after 30 days.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [8] Brusetti, 2006, Usefulness of length heterogeneity-PCR for monitoring lactic acid bacteria succession during maize ensiling, FEMS Microbiol. Ecol. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationIn corn, LAB succession was mainly dominated by Lb. plantarum, followed with Ped. pentosaceus.
“In corn, LAB succession was mainly dominated by Lb. plantarum, followed with Ped. pentosaceus [6].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [6] Lin, 1992, Epiphytic lactic acid bacteria succession during the pre-ensiling and ensiling periods of alfalfa and corn, J. Appl. Bacteriol. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationEikmeyer et al. observed that without LAB inoculation, Lactobacillus, Lactococcus, and Weissella dominated grass silage; inoculation with Lb. buchneri increased the Lactobacillus genus after 58 days.
“Without LAB inoculation, three genera, Lactobacillus, Lactococcus, and Weissella, dominated the silage. Inoculation with Lb. buchneri increased the size of the Lactobacillus genus in the treated samples after 58 days of storage.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [10] Eikmeyer, 2013, Metagenome analyses reveal the influence of the inoculant Lactobacillus buchneri CD034 on the microbial community involved in grass ensiling, J. Biotechnol. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationInoculation of silage increases N and protein availability.
“N and protein availability [2]”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [2] Basso, 2014, Effects of feeding corn silage inoculated with microbial additives on the ruminal fermentation, microbial protein yield, and growth performance of lambs, J Anim Sci. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationLin et al. characterized more than 3400 bacterial isolates in alfalfa and corn crops and corresponding silage; 306 were classified as homofermentative LAB.
“Lin et al. [6] characterized more than 3400 bacterial isolates in a study using alfalfa and corn crops and the corresponding silage. Of those colonies, 306 were classified as homofermentative lactic acid bacteria (LAB).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [6] Lin, 1992, Epiphytic lactic acid bacteria succession during the pre-ensiling and ensiling periods of alfalfa and corn, J. Appl. Bacteriol. source
Not checked in the free run.
Classified as probably not a substantial claim. May combine two claims. The quote only partly states this claim.
Study design and conductnone givenDifferentially abundant OTUs were assessed with edgeR using its GLM approach, with logFC ≥ 1.5 and FDR < 0.05 considered differentially abundant.
“OTUs having a logFC (log fold-change) ratio equal or higher than 1.5 and FDR (false discovery rate) <0.05 were considered as differentially abundant.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationInoculation of silage reduces methane emissions.
“reducing methane emissions [3]”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [3] Ellis, 2016, Effects of lactic acid bacteria silage inoculation on methane emission and productivity of Holstein Friesian dairy cattle, J Dairy Sci. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationSome Lb. hilgardii strains increase fermentation and aerobic stability of sugar cane and improve feed intake and milk yield of dairy cows.
“Some strains were not only effective in increasing the fermentation and aerobic stability of sugar cane, but also in improving the feed intake and milk yield of dairy cows [13,14].”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [13] Santos, 2017, Effect of the inoculation of sugarcane silage with Lactobacillus hilgardii and Lactobacillus buchneri on feeding behavior and milk yield of dairy cows, J. Anim Sci. source
Not checked in the free run.
- cites [14] Reis, 2018, Wild Lactobacillus hilgardii (CCMA 0170) strain modifies the fermentation profile and aerobic stability of corn silage, J. Appl. Anim. Res. source
Not checked in the free run.
May combine two claims.
Interpretationown dataInoculation with LAB suggests the establishment of inoculated strains in the silage, or the promotion of other Lactobacillus species due to inoculation.
“suggests the establishment of inoculated strains in the silage, or the promotion of other Lactobacillus species due to inoculation.”
Quote in the paperSubstantial claimClassified as probably not a substantial claim.
PremisecitationLactic acid bacteria used as silage additives improve several fermentation parameters, including aerobic stability.
“Lactic acid bacteria (LAB) used as silage additives have been shown to improve several fermentation parameters, including aerobic stability.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [5] Oliveira, 2017, Meta-analysis of effects of inoculation with homofermentative and facultative heterofermentative lactic acid bacteria on silage fermentation, aerobic stability, and the performance of dairy cows, J Dairy Sci. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationA recent meta-analysis confirmed benefits of homofermentative and facultative heterofermentative LAB inoculants and proposed limitations and benefits.
“A recent meta-analysis of the impacts of homofermentative and facultative heterofermentative lactic acid bacteria (LAB) inoculants [5] confirmed these results and proposed some limitations and benefits to be gained by inoculation.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [5] Oliveira, 2017, Meta-analysis of effects of inoculation with homofermentative and facultative heterofermentative lactic acid bacteria on silage fermentation, aerobic stability, and the performance of dairy cows, J Dairy Sci. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationInoculation of silage increases adsorption of certain mycotoxins.
“and adsorption of certain mycotoxins [4]”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [4] Ma, 2017, The capacity of silage inoculant bacteria to bind aflatoxin B1 in vitro and in artificially contaminated corn silage, J Dairy Sci. source
Not checked in the free run.
Classified as probably not a substantial claim.
Study design and conductnone givenMini-silos were incubated using a completely randomized design (4 inoculation treatments × 8 opening periods).
“The mini-silos were incubated using a completely randomized design (4 inoculation treatments × 8 opening periods).”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationInoculation of silage increases animal performance.
“including increasing animal performance [1]”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [1] Weinberg, 1996, New trends and opportunities in the development and use of inoculants for silage, FEMS Microbiol Rev. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationStrains belonging to Streptococcus, Lactococcus, and Leuconostoc were identified in silage.
“Strains belonging to the genus Streptococcus, Lactococcus, and Leuconostoc were also identified in silage [7].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [7] Buxton, D.R., Muck, R.E., and Harrison, J.H. (2003). Microbiology of ensiling. Silage science and technology, American Society of Agronomy. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Interpretationown dataOne of the OTUs reduced by LH treatment was affiliated as either LH-LD-LF and is hypothesized to be Lb. hilgardii with this treatment.
“One of these OTUs was affiliated as either LH-LD-LF and we hypothesize that it was Lb. hilgardii with this treatment.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationStenotrophomonas are encountered in the plant rhizosphere and endosphere and are common soil microorganisms.
“Stenotrophomonas are encountered in the plant rhizosphere and endosphere and Stenotrophomonas is a common soil microorganism [44].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [44] Hauben, 1999, Genomic diversity of the genus Stenotrophomonas, Int J. Syst. Bacteriol. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Interpretationown dataThe absence of the Dipodascus OTU in LB-LH after 64 days is hard to explain because OTUs of this genus are present when LB or LH are used separately.
“The absence of Dipodascus OTU in the LB–LH treatment after 64 days of fermentation is hard to explain, since OTUs of this genus are present when LB or LH are used separately.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationSantos et al. [48] reported that Candida, Saccharomyces, Pichia, and Kazachstania were the dominant yeast genera in corn and high moisture corn silages.
“Santos et al. [48] studied the diversity of yeast populations in corn and high moisture corn silages. They reported that isolates obtained on malt agar plates showed that Candida, Saccharomyces, Pichia, and Kazachstania were the dominant genera.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [48] Santos, 2017, Identification of the major yeasts isolated from high moisture corn and corn silages in the United States using genetic and biochemical methods, J. Dairy Sci. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationDirect inoculation of wilted rice straw with a Lb. helveticus strain had no effect on the ensiling process, and the strain only survived for five days post-inoculation.
“direct inoculation of wilted rice straw with a Lb. helveticus strain had no effect on the ensiling process, and the strain only survived for five days post-inoculation [42].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [42] Giraffa, 2010, Importance of lactobacilli in food and feed biotechnology, Res. Microbiol. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationEpicoccum is a ubiquitous saprophytic mould often associated with plant senescence and the early phases of composting.
“Epicoccum is a ubiquitous saprophytic mould often associated with plant senescence and the early phases of composting [45].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [45] Zhou, 1991, Colonization of bean flowers by Epicoccum purpurascens, Phytopathology. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationMansfield and Kuldau [50] reported that Geotrichum candidum was the dominant yeast in corn silage from Pennsylvania over a two-year period.
“Mansfield and Kuldau [50] reported that Geotrichum candidum was the dominant yeast in corn silage from Pennsylvania over a two-year period.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [50] Mansfield, 2007, Microbiological and molecular determination of mycobiota in fresh and ensiled maize silage, Mycologia source
Not checked in the free run.
May combine two claims.
Interpretationown dataThe observed variation between samples was related to inoculation treatment and time of incubation.
“The observed variation between samples was related to the inoculation treatment as well as the time of incubation.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationDipodascus and Geotrichum belong to the family Dipodascaceae, taxonomic revisions are underway, and Geotrichum may be the anamorphic state of Dipodascus and Galactomyces.
“Both genera belong to the family Dipodascaceae and taxonomic revisions are underway [51], as Geotrichum may be the anamorphic state of species of the genera Dipodascus and Galactomyces [52].”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [51] Alper, 2011, Ribosomal DNA polymorphisms in the yeast Geotrichum candidum, Fungal Biology. source
Not checked in the free run.
- cites [52] Sulo, 2009, Geotrichum bryndzae sp. nov., a novel asexual arthroconidial yeast species related to the genus Galactomyces, Int. J. Syst. Evol. Microbiol. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationB. pumilus is often observed during aerobic deterioration.
“B. pumilus is often observed during aerobic deterioration [40].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [40] Li, 2011, Bacterial and fungal communities of wilted Italian ryegrass silage with and without Lactobacillus rhamnosus or Lactobacillus buchneri, Lett. Appl. Microbiol. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationNeosetophoma is an Ascomycete belonging to the Phoma group which may have saprophytic functions.
“Neosetophoma is an Ascomycete belonging to the Phoma group which may have saprophytic functions [46].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [46] Woudenberg, 2010, Systematic reappraisal of species in Phoma section Paraphoma, Pyrenochaeta and Pleurophoma, Mycologia source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationMost Sarocladium species are important plant pathogens.
“Most Sarocladium species are important plant pathogens [47].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [47] Giraldo, 2015, Phylogeny of Sarocladium (Hypocreales), Persoonia. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationA similar study [49] identified Issatchenkia, Geotrichum, and Pichia as the dominant genera in corn silage.
“A similar study was performed on corn silage [49], which identified Issatchenkia, Geotrichum, and Pichia as the dominant genera.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [49] Middelhoven, 1988, Development of the yeast flora of whole-crop maize during ensiling and during subsequent aerobiosis, J. Sci. Food Agric. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationKeshri et al. observed similar phases of colonization and bacterial richness evolution in corn silage.
“Keshri et al. [39] observed similar phases of colonization and of bacterial richness evolution.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [39] Keshri, 2018, Microbiome dynamics during ensiling of corn with and without Lactobacillus plantarum inoculant, Appl. Microbiol. Biotechnol. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationSantos et al. [13] observed significant discrepancies in populations between samples due to geographic or environmental differences.
“Santos et al. [13] observed significant discrepancies in populations between samples due to geographic or environmental differences.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [13] Santos, 2017, Effect of the inoculation of sugarcane silage with Lactobacillus hilgardii and Lactobacillus buchneri on feeding behavior and milk yield of dairy cows, J. Anim Sci. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationA study of LAB diversity in tomato pomace silage reported that 4% of the isolates belonged to Lb. helveticus.
“a study of lactic acid bacteria diversity in tomato pomace silage reported that 4% of the isolates belonged to Lb. helveticus [41]”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [41] Wu, 2014, Naturally occuring lactic acid bacteria isolated from tomato pomace silage, Asian Australas. J. of Anim. Sci. source
Not checked in the free run.
May combine two claims.
InterpretationreasoningInoculation favors a faster succession to a potentially more stable silage, with fewer active species.
“This observation means that inoculation favors a faster succession to a potentially more stable silage, with fewer active species.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
InterpretationcitationOur results after 1 day of incubation are in line with the diversity reported at time 0 by Gharechahi et al. and to data after 1 and 2 days from Keshri et al.
“Our results after 1 day of incubation are in line with the diversity reported at time 0 by Gharechahi et al. [35] and to data after 1 and 2 days from Keshri et al. [39].”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [35] Gharechahi, 2017, The dynamics of the bacterial communities developed in maize silage, Microb. Biotechnol. source
Not checked in the free run.
- cites [39] Keshri, 2018, Microbiome dynamics during ensiling of corn with and without Lactobacillus plantarum inoculant, Appl. Microbiol. Biotechnol. source
Not checked in the free run.
May combine two claims.
Interpretationown dataOur results for fresh forage do not corroborate those of Gharechahi et al. in maize silage, but are more in line with the diversity observed in fresh small grains or oats, as well as with data published by McGarvey et al. on alfalfa.
“Our results for fresh forage do not corroborate those of Gharechahi et al. in maize silage [35], but are more in line with the diversity observed in fresh small grains [33] or oats [15], as well as with data published by McGarvey et al. [36] on alfalfa.”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [35] Gharechahi, 2017, The dynamics of the bacterial communities developed in maize silage, Microb. Biotechnol. source
Not checked in the free run.
- cites [33] Dunière, L., Xu, S., Long, J., Elekwachi, C., Wang, Y., Turkington, K., Forster, R., and McAllister, T.A. (2017). Bacterial and fungal core microbiomes associated with small grain silages during ensiling and aerobic spoilage. BMC Microbiology., 17. source
Not checked in the free run.
- cites [15] Romero, 2017, Laboratory silo type and inoculation effects on nutritional composition, fermentation, and bacterial and fungal communities of oat silage, J. Dairy Sci. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationIn a recent metasequencing study, Lb. brevis was identified during the early ensiling phase (10-30 days) in the un-inoculated control and Lb. brevis or Lb. parafarraginis treated forage.
“In a recent metasequencing study in which corn stover was inoculated with different Lactobacillus strains, Lb. brevis was identified during the early ensiling phase, i.e., between 10 and 30 days of fermentation, in the un-inoculated control and Lb. brevis or Lb. parafarraginis treated as forage only [43].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [43] Xu, 2017, Effects of inoculants Lactobacillus brevis and Lactobacillus parafarraginis on the fermentation characteristics and microbial communities of corn stover silage, Sci. Rep. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationKeshri et al. compared a non-inoculated control to silage inoculated with a L. plantarum strain, but had the same interactions between Leuconostocaceae and Lactobacillaceae in relation with time of fermentation.
“They compared a non-inoculated control to silage, inoculated with a L. plantarum strain, but had the same interactions between Leuconostocaceae and Lactobacillaceae in relation with time of fermentation.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [39] Keshri, 2018, Microbiome dynamics during ensiling of corn with and without Lactobacillus plantarum inoculant, Appl. Microbiol. Biotechnol. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationPropionic acid synthesis follows a specific pathway putatively involving Lactobacillus diolivorans or Lactobacillus reuteri.
“The synthesis of propionic acid follows a specific pathway, putatively involving other members of the lactic acid bacterial population, i.e., Lactobacillus diolivorans [68] or Lactobacillus reuteri [69].”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [68] Krooneman, 2002, Lactobacillus diolivorans sp. nov., a 1,2-propanediol-degrading bacterium isolated from aerobically stable maize silage, Int J. Syst. Evol. Microbiol. source
Not checked in the free run.
- cites [69] Amin, 2013, 1,2 propanediol utilization by Lactobacillus reuteri DSM 20016, role in bioconversion of glycerol to 1,3 propanediol, 3-hydroxypropionaldehyde and 3-hydroxypropionic acid, J. Gen. Engin. Biotechnol. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationA complex of 22 enzymes is linked to degradation of 1,2-propanediol to non-equimolar levels of 1-propanol or propionic acid, with propionaldehyde as an intermediate.
“A complex of 22 enzymes has been shown to be linked to the degradation of 1,2-propanediol to non-equimolar levels of 1-propanol (reduced) or propionic acid (oxidized), with propionaldehyde as an intermediate in the reaction [70,71].”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [70] Sriramulu, 2008, Lactobacillus reuteri DSM 20016 produces cobalamin-dependent diol dehydratase in metabososomes and metabolizes 1,2-propanediol by disproportionation, J. Bacteriol. source
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- cites [71] Cheng, 2011, Genetic analysis of the protein shell of the microcompartments involved in coenzyme B12-dependent 1,2-propanediol degradation by Salmonella, J. Bacteriol. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationA change in LAB populations was previously reported and explained by the lower resistance to acid of the primary colonizing species.
“A change in LAB populations was previously reported and explained by the lower resistance to acid of the primary colonizing species [59].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [59] Serror, 2002, Stress responses in lactic acid bacteria, Antonie van Leeuwenhoek source
Not checked in the free run.
May combine two claims.
InterpretationreasoningThe pH would be too low to cause high bacterial and fungal mortality, but as acetic acid concentration progressively increased in Control, it could induce later changes in the microbial population.
“This pH would be too low to cause high bacterial and fungal mortality, but as its concentration progressively increased during the course of fermentation in the Control, acetic acid could induce later changes in the microbial population.”
Quote in the paperSubstantial claimClassified as probably not a substantial claim.
PremisecitationLb. buchneri 40788 improves aerobic stability by reducing yeast counts.
“several authors demonstrated that Lb. buchneri 40788 improves aerobic stability by reducing yeast counts [58].”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [58] Kung, 2003, The effect of treating alfalfa with Lactobacillus buchneri 40788 on silage fermentation, aerobic stability, and nutritive value for lactating dairy cows, J. Dairy Sci. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationMicrobiome analysis of sweet sorghum revealed Hannaella early in fermentation and linked it to high total sugar content.
“Microbiome analysis of sweet sorghum revealed Hannaella early in the fermentation process and was linked to high total sugar content [56].”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [56] Gallagher, 2018, Dynamic bacterial and fungal microbiomes during sweet sorghum ensiling impact bioethanol production, Biores. Technol. source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationHu et al. [63] observed higher acetate concentrations with co-inoculation of Lb. plantarum and Lb. buchneri than with Lb. buchneri alone, but the concentration depended on dry matter content and no statistical interactions were observed.
“In a study of co-inoculation with Lb. plantarum and Lb. buchneri, Hu et al. [63] observed higher concentrations of acetate using both strains compared to Lb. buchneri alone, but the concentration depended on the dry matter content, and overall, no statistical interactions were observed.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [63] Hu, 2009, The effect of Lactobacillus buchneri 40788 or Lactobacillus plantarum MTD-1 on the fermentation and aerobic stability of corn silages ensiled at two dry matter contents, J. Dairy Sci. source
Not checked in the free run.
May combine two claims.
Interpretationown dataLB-LH had the lowest bacterial alpha diversity, which influenced both bacterial and fungal communities to improve forage preservation and potentially animal performance.
“LB–LH also had the lowest alpha diversity level of bacteria, which influenced both bacterial and fungal communities to improve forage preservation and potentially animal performance.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataThe presence of the Dipodascus OTU was associated with the highest fungal diversity (LB and LH), while Candida OTUs were associated with lower fungal alpha diversity (Control).
“The presence of the Dipodascus OTU was associated with the highest fungal diversity (LB and LH), while Candida OTUs were associated with lower fungal alpha diversity (Control).”
Quote in the paperNot a substantial claimMay combine two claims.
InterpretationcitationAcetic acid could enter microbial cells, dissociate, decrease intracellular pH, cause energy expenditure to maintain physiological pH, and eventually kill cells unable to adapt.
“Acetic acid could then easily enter microbial cells, dissociate, and decrease the intracellular pH associated with notable energy expenditure to maintain physiological pH values, eventually killing cells unable to adapt.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [67] Russell, 1997, The effects of fermentation acids on bacterial growth, Adv. Microb. Physiol. source
Not checked in the free run.
Classified as probably not a substantial claim. May combine two claims.
Study design and conductown dataBecause logCPM values for most OTUs analyzed were high, the differences reported between treatments are considered meaningful.
“As logCPM values for most OTUs analyzed here were high, we consider that the differences reported between treatments are meaningful.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataAlthough LH led to higher lactic acid accumulation, early changes in fermentation pattern confirm a slight difference in microbial community structure compared to LB and LB-LH.
“Although LH led to a higher accumulation of lactic acid, changes in the fermentation pattern that occurred early in the process confirm the slight difference in the microbial community structure compared to LB and the LB–LH.”
Quote in the paperNot a substantial claim
The paper relies on this without support.
Inoculation with a combination of Lb. buchneri NCIMB40788 and Lb. hilgardii CNCM-I-4785 increases aerobic stability compared to each strain inoculated independently.
“Inoculation with a combination of Lactobacillus buchneri NCIMB40788 and Lactobacillus hilgardii CNCM-I-4785, contributes to an increase in aerobic stability, compared to each strain inoculated independently.”
The paper relies on this without support.
Few microbial diversity studies have tried to understand successional patterns following inoculation with multiple strains.
“but few microbial diversity studies have tried to understand the successional patterns following inoculation with multiple strains.”
The paper relies on this without support.
The succession of populations of lactic acid bacteria at the different phases of ensiling is a dynamic process that varies throughout the fermentation period.
“The succession of populations of lactic acid bacteria at the different phases of ensiling is a dynamic process that varies throughout the fermentation period”
The paper relies on this without support.
Inoculation of forage with LAB at ensiling generally improves the overall quality of silage by fermenting soluble sugars to lactic acid along the homofermentative pathway, or to acetic acid and ethanol using heterofermentative pathways.
“Inoculation of the forage with LAB at ensiling generally improves the overall quality of silage following their capacity to ferment soluble sugars to lactic acid along the homofermentative pathway, or to acetic acid and ethanol using heterofermentative pathways.”
The paper relies on this without support.
Commercial microbial silage additive formulations often combine different strains of LAB with contrasting functions.
“Commercial microbial silage additive formulations often combined different strains of LAB with contrasting functions”
The paper relies on this without support.
Several species of the genus Peyronellaea are plant pathogens.
“Several species of the genus Peyronellaea are plant pathogens.”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
L. hilgardii is closely related to L. buchneri, and both possess the ability to degrade lactic acid to acetic acid and to 1,2-propanediol in anaerobic conditions.
“Phylogenetic evaluation and fermentation profiling of L. hilgardii have revealed that it is closely related to L. buchneri, as both possess the ability to degrade lactic acid to acetic acid and to 1,2-propanediol in anaerobic conditions (Heinl et al., 2012; Drouin et al., 2019).”
From Lentilactobacillus hilgardii Inoculum, Dry Matter Contents at Harvest and Length of Conservation Affect Fermentation Characteristics and Aerobic Stability of Corn Silage (2021) · cites this paper as Drouin et al., 2019
The Introduction (page not specified) identifies L. buchneri as a producer of 1,2-propanediol. Fermentation Profiling (page not specified) reports increased 1,2-propanediol and acetic acid in silage inoculated with either species, but says lactic acid did not fall significantly with L. hilgardii. The paper therefore does not establish that both species degrade lactic acid into those products under anaerobic conditions, and the passages found do not state that the species are closely related. (LLM, conf=0.87)
Experimental — accuracy not yet measured
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
Each contradiction between two passages listed here was confirmed by an independent check.
Acetic acid is described as higher in LB-LH than LB, but both have the same reported value
MinorThe text says acetic acid was always higher in LB-LH than in LB at later openings, but reports 40.4 g·kg−1 DM for both treatments at day 64.
“the concentrations of both lactic and acetic acid were always higher in LB–LH at the later opening.”
“After 64 days of incubation, the concentration of acetic acid in LB was 40.4 ± 4.1 g·kg−1 DM, similar to that in the LB–LH and LH treatments, with 40.4 ± 4.6 and 36.0 ± 3.1 g·kg−1 DM, respectively”
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References 68 · Cited by 71
Research works printed but not linked: 2
- Crawley, M.J. (2013). The R book, John Wiley & Sons. [2nd ed.].
- Mansfield, M.A. (2005). Fungi and mycotoxins in fresh and ensiled maize and the affects of agronomic practices weather conditions and silage characteristics on toxin contamination. [Ph.D. Thesis, Pensylvania State University].
- Authors
- Drouin, P., Tremblay, J., & Chaucheyras-Durand, F.
- Affiliations
- Lallemand Specialities Inc., Milwaukkee, WI 53218, USA
- National Research Council Canada (CA)
- Lallemand SAS, 19 rue des Briquetiers, 31702 Blagnac CEDEX, France
- Corresponding author
- Drouin, Pascal
- Venue
- Microorganisms
- Publisher
- MDPI AG
- Published
- 2019-11-21
- Volume
- 7
- Issue
- 12
- Pages
- 595
- ISSN
- 2076-2607 (ISSN-L)
- PMC
- PMC6955939
- OpenAlex
- W2990610922
- Semantic Scholar
- a376c67c807382473991a8752b94ba6c60bbbaee
- Cited by
- 71
- References
- 68
- Citations by year
- 2026: 6 · 2025: 11 · 2024: 6 · 2023: 8 · 2022: 11 · 2021: 19 · 2020: 9 · 2018: 1
- FWCI
- 13.70
- Type
- journal article
- Language
- en
- Open access
- gold
- dx.doi.org
- Licence
- Locations
- Microorganisms (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- HAL (submittedVersion, cc-by)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Topics
- Life Sciences › Agricultural and Biological Sciences › Agronomy and Crop Science › Ruminant Nutrition and Digestive Physiology
- Life Sciences › Agricultural and Biological Sciences › Food Science › Probiotics and Fermented Foods
- Life Sciences › Agricultural and Biological Sciences › Animal Science and Zoology › Animal Nutrition and Physiology
- Keywords
- corn silage, silage inoculation, Lactobacillus buchneri, Lactobacillus hilgardii, lactic acid bacteria, co-inoculation, silage microbiota, microbial succession, aerobic stability, bacterial diversity, Leuconostocaceae, Lactobacillaceae, yeast diversity, fermentation kinetics
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