The DOI matches its Crossref record; 281 of the 292 references it cites were found in a registry or an index; none of the 287 sources its claims cite is checked for support yet.
Targeting Metabolism for Cancer Therapy
Open accessAbstract
Metabolic reprogramming contributes to tumor development and introduces metabolic liabilities that can be exploited to treat cancer. Chemotherapies targeting metabolism have been effective cancer treatments for decades, and the success of these therapies demonstrates that a therapeutic window exists to target malignant metabolism. New insights into the differential metabolic dependencies of tumors have provided novel therapeutic strategies to exploit altered metabolism, some of which are being evaluated in preclinical models or clinical trials. Here, we review our current understanding of cancer metabolism and discuss how this might guide treatments targeting the metabolic requirements of tumor cells.
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In the paper
“New insights into the differential metabolic dependencies of tumors have provided novel therapeutic strategies to exploit altered metabolism, some of which are being evaluated in pre-clinical models or clinical trials.”
§ Targeting Metabolism for Cancer Therapy > Abstract
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“Furthermore, the proliferation rates of normal cells are often greater than those of cancer cells (Vander Heiden and DeBerardinis, 2017), and prominent side effects of antimetabolite chemotherapy are caused by the destruction of normal rapidly proliferating cells.”
§ Targeting Metabolism for Cancer Therapy > Introduction
What the sources say
- Not checked yetcites Vander Heiden and DeBerardinis, 2017
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In the paper
“Nevertheless, the fact that antimetabolite chemotherapies are clinically effective suggests that a metabolic therapeutic window exists beyond proliferation rate and response to DNA damage.”
§ Targeting Metabolism for Cancer Therapy > Introduction
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In the paper
“The clinical success of antimetabolites for treating cancer is attributed to the increased metabolic demand of neoplastic cells for nucleotide biosynthesis and DNA replication.”
§ Targeting Metabolism for Cancer Therapy > Introduction
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In the paper
“Indeed, activation of pyruvate kinase can inhibit cancer cell proliferation and tumor growth in some settings (Anastasiou et al., 2012; Kung et al., 2012; Walsh et al., 2010), but because pyruvate kinase expression is dispensable for the growth of some tumors (Cortes-Cros et al., 2013; Israelsen et al., 2013), whether pyruvate kinase activation will lead to durable responses remains an area of”
§ Targeting Metabolism for Cancer Therapy > Altered glucose metabolism
What the sources say
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In the paper
“In 1947, Sidney Farber, one of the pioneers of modern chemotherapy, discovered that aminopterin could cause disease remission in children with acute lymphoblastic leukemia (Dayton et al., 2016; Farber and Diamond, 1948).”
§ Targeting Metabolism for Cancer Therapy > Introduction
What the sources say
- Not checked yetcites Dayton et al., 2016 source
- Not checked yetcites Farber and Diamond, 1948
Strength:plain· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“As a result, D-2HG accumulation in cancer cells expressing mutant IDH results in hypermethylation of histones and CpG islands in DNA (Figueroa et al., 2010; Lu et al., 2012; Turcan et al., 2012).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Oncogenic isocitrate dehydrogenase mutations
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesA conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Regardless of the underlying mechanism, alterations in basal enzymatic activity of a given reaction present potential vulnerabilities that might be targeted for cancer therapy.”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesThe paper states this without a source or data behind it here, so there is nothing to check it against. The quote shows it is in the paper.
In the paper
“The expression of metabolic genes is frequently altered in cancer. Some changes in metabolic enzyme expression result from gene amplification or deletion, while others are downstream of growth signaling pathways or are the consequences of epigenetic changes. The activity of metabolic enzymes can also be affected by mutations in the genes encoding these enzymes.”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression
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In the paper
“This phenomenon is now referred to as aerobic glycolysis, or the Warburg effect, and represents a striking metabolic difference between cancer and most normal tissues.”
§ Targeting Metabolism for Cancer Therapy > Altered glucose metabolism
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesA conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Doses of 2-DG that inhibit glycolysis enough to limit cancer growth may not be tolerated due to similar effects in normal tissues that also rely on glucose metabolism.”
§ Targeting Metabolism for Cancer Therapy > Altered glucose metabolism
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesA conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Targeting general proliferative metabolism may not offer an adequate therapeutic window since many non-malignant cells, including those in bone marrow, intestinal crypts, and hair follicles, are rapidly proliferating.”
§ Targeting Metabolism for Cancer Therapy > Introduction
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In the paper
“Recurrent somatic point mutations in the genes coding for isocitrate dehydrogenase 1 and 2 (IDH1, IDH2) are found in a wide variety of cancers, including glioblastoma multiforme (GBM) (Yan et al., 2009) and acute myeloid leukemia (AML) (Dang et al., 2016; Mardis et al., 2009).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Oncogenic isocitrate dehydrogenase mutations
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesA conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Inducing DNA damage with the use of genotoxic chemotherapies can sensitize cells to inhibitors of nucleotide biosynthesis (Brown et al., 2017; Peters et al., 2000), suggesting that oncogenic mutations that reduce the DNA damage response is one explanation for why a therapeutic window exists for antimetabolite compounds.”
§ Targeting Metabolism for Cancer Therapy > Introduction
Strength:hedged· not yet calibratedCausal:conditional· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Inducing DNA damage with the use of genotoxic chemotherapies can sensitize cells to inhibitors of nucleotide biosynthesis (Brown et al., 2017; Peters et al., 2000), suggesting that oncogenic mutations that reduce the DNA damage response is one explanation for why a therapeutic window exists for antimetabolite compounds.”
§ Targeting Metabolism for Cancer Therapy > Introduction
What the sources say
Strength:plain· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesIn the paper
“Numerous preclinical studies have demonstrated anti-proliferative effects of 2-DG (Zhang et al., 2014a).”
§ Targeting Metabolism for Cancer Therapy > Altered glucose metabolism
What the sources say
- Not checked yetcites Zhang et al., 2014a
Strength:boosted· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Despite challenges associated with targeting glucose metabolism directly, glucose uptake by cancer cells has been successfully exploited in patients through the use of the fluoro-deoxyglucose positron-emission-tomography (FDG-PET) imaging to stage cancers and assess response to therapy (d’Amico, 2015; Farwell et al., 2014; Zhu et al., 2011).”
§ Targeting Metabolism for Cancer Therapy > Altered glucose metabolism
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Paradoxically, decreased pyruvate kinase activity is associated with increased aerobic glycolysis, suggesting the activation of pyruvate kinase activity might be a way to target cancer (Christofk et al., 2008).”
§ Targeting Metabolism for Cancer Therapy > Altered glucose metabolism
What the sources say
- Not checked yetcites Christofk et al., 2008 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesA conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“The relative lack of 2-DG clinical efficacy at tolerable doses has been echoed by most other attempts to directly target aerobic glycolysis.”
§ Targeting Metabolism for Cancer Therapy > Altered glucose metabolism
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“but because pyruvate kinase expression is dispensable for the growth of some tumors (Cortes-Cros et al., 2013; Israelsen et al., 2013), whether pyruvate kinase activation will lead to durable responses remains an area of active study”
§ Targeting Metabolism for Cancer Therapy > Altered glucose metabolism
What the sources say
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesA conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Cancers expressing mutant IDH represent a unique case in which a metabolic enzyme can act as an oncogene and contribute to tumor development.”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Oncogenic isocitrate dehydrogenase mutations
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In the paper
“Mammals have two glutaminase genes, GLS and GLS2, and targeting the enzymes encoded by these genes with chemical inhibitors has been found to decrease cancer cell proliferation in both in vitro and in vivo models (Gross et al., 2014; Jacque et al., 2015; Le et al., 2012; Xiang et al., 2015; Yuneva et al., 2012).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Upregulated glutaminolysis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Emerging work suggests that increased serine synthesis may be particularly important for maintaining redox homeostasis during metastasis (Piskounova et al., 2015).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Increased dependence on serine
What the sources say
- Not checked yetcites Piskounova et al., 2015 source
Strength:hedged· not yet calibratedCausal:conditional· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Serine is present in plasma and can be taken up by cells via amino acid transporters, yet PHGDH expression and increased serine biosynthesis have been shown to be important for supporting cancer cell proliferation and survival in both in vitro and in vivo settings (Locasale et al., 2011; Possemato et al., 2011).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Increased dependence on serine
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Glutamine metabolism is upregulated by various oncogenic signaling pathways (Altman et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Upregulated glutaminolysis
What the sources say
- Not checked yetcites Altman et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“There is also data that GLS2 activity can be tumor suppressive (Hu et al., 2010), underscoring the importance of defining the patient population likely to benefit from glutaminase inhibition.”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Upregulated glutaminolysis
What the sources say
- Not checked yetcites Hu et al., 2010
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Glutamine carbon has been found to contribute to aspartate, glutamate and tricarboxylic acid (TCA) cycle metabolites via glutaminolysis (Figure 5) (Altman et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Upregulated glutaminolysis
What the sources say
- Not checked yetcites Altman et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Certain tumors are dependent on uptake of environmental serine (Jain et al., 2012; Maddocks et al., 2013; Maddocks et al., 2017), and limiting plasma serine availability can be beneficial for patients with these cancers.”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Increased dependence on serine
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Functional PHGDH loss is toxic to tumor cells with PHGDH amplification or high serine biosynthetic flux (Locasale et al., 2011; Mattaini et al., 2015; Possemato et al., 2011; Zhang et al., 2017), and small-molecule inhibitors targeting PHGDH have been shown to inhibit serine synthesis and tumor proliferation in vitro and in xenograft cancer models (Mullarky et al., 2016; Pacold et al., 2016; Wang”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Increased dependence on serine
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Importantly, inhibiting glutamine entry into the TCA cycle can blunt tumor progression in a MYC-driven cancer model of liver cancer (Xiang et al., 2015; Yuneva et al., 2012) and a MYC-inducible Burkitt lymphoma model (Le et al., 2012; Xiang et al., 2015).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Upregulated glutaminolysis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“With respect to proliferating cells such as cancer, serine is the primary carbon donor to the tetrahydrofolate (THF) cycle, which is required for both purine and pyrimidine nucleotide biosynthesis (Figure 6)(Snell et al., 1987).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Increased dependence on serine
What the sources say
- Not checked yetcites Snell et al., 1987 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“and therapies that deplete exogenous arginine (Table 1) may be effective in treating malignancies where FH is lost (Phillips et al., 2013).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > FH and SDH loss in heritable cancer syndromes
What the sources say
- Not checked yetcites Phillips et al., 2013 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesThe paper states this without a source or data behind it here, so there is nothing to check it against. The quote shows it is in the paper.
In the paper
“Loss of metabolic enzyme expression can also occur as a passenger event. For example, genomic deletions leading to loss of tumor suppressor genes can also lead to loss of adjacent non-essential metabolic genes.”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Metabolic collateral lethality
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In the paper
“Furthermore, ENO1 loss results in extreme sensitivity to the pan-enolase inhibitor phosphonoacetohydroxamate (PHAH) and SF2312 (Leonard et al., 2016; Muller et al., 2012).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Metabolic collateral lethality
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Recombinant pegylated arginine deiminase (ADI-PEG20) has been tested in clinical trials to treat melanoma and hepatocellular carcinoma with some therapeutic benefit (Ascierto et al., 2005; Izzo et al., 2004; Ott et al., 2013; Szlosarek et al., 2013; Yang et al., 2010).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Loss of argininosuccinate synthase 1 expression
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“To cope with TCA cycle truncation and still produce aspartate, SDH defective cells upregulate PC protein expression in culture and in tumors to synthesize aspartate from glucose (Cardaci et al., 2015; Lussey-Lepoutre et al., 2015).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > FH and SDH loss in heritable cancer syndromes
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Combining serine restriction with other drugs may also potentiate antitumor responses (Gravel et al., 2014; Maddocks et al., 2013; Maddocks et al., 2017).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Increased dependence on serine
What the sources say
Strength:hedged· not yet calibratedCausal:conditional· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“MTAP loss results in reduced PRMT5 activity and renders MTAP-null cancer cell more sensitive to PRMT5 depletion than isogenic counterparts that express MTAP (Kryukov et al., 2016; Marjon et al., 2016; Mavrakis et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Metabolic collateral lethality
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“However, the use of arginine-catabolizing enzymes may not be an effective therapeutic strategy for all ASS1-deficient cancers, as some ADI-treated tumors have been found to re-express ASS1 (Feun et al., 2012; Long et al., 2013; Shen et al., 2003).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Loss of argininosuccinate synthase 1 expression
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Consequently, FH deletion renders mouse and human cells more sensitive to genetic and pharmacological inhibition of heme oxygenase 1 (Hmox1), an enzyme involved in heme degradation.”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > FH and SDH loss in heritable cancer syndromes
What the sources say
- Not checked yetcites Frezza et al., 2011 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Additionally, ablation of methionine adenosyltransferase II alpha (MAT2A), the enzyme that produces the canonical and high-affinity PRMT5 substrate, S-adenosylmethionine (SAM), also reduces PRMT5-dependent methylation and proliferation in MTAP-deleted cancer cells (Marjon et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Metabolic collateral lethality
What the sources say
- Not checked yetcites Marjon et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Genetic or epigenetic silencing of ASS1 expression provides an advantage to tumor cells by allowing them to preserve cellular aspartate (Rabinovich et al., 2015), a poorly transported nutrient that can be a critical output of the TCA cycle to support de novo nucleotide synthesis and cell proliferation (Birsoy et al., 2015; Sullivan et al., 2015).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Loss of argininosuccinate synthase 1 expression
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Co-administration of MTA with toxic adenosine analogues has been shown to be selectively lethal to MTAP deficient cancer cells, since MTAP-expressing normal tissues are able to convert MTA to adenine to competitively inhibit the effects of the analogues (Lubin and Lubin, 2009).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Metabolic collateral lethality
What the sources say
- Not checked yetcites Lubin and Lubin, 2009
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Like D-2HG, fumarate and succinate accumulation can inhibit some αKG-dependent dioxygenases, resulting in hypermethylation of DNA and histones in tumors exhibiting loss of FH or SDH (Hoekstra et al., 2015; Letouze et al., 2013; Xiao et al., 2012).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > FH and SDH loss in heritable cancer syndromes
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Because cells often exhibit redundancy in essential pathways, this phenomenon can introduce a therapeutic opportunity to target cancer cells that has been termed collateral lethality (Muller et al., 2015).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Metabolic collateral lethality
What the sources say
- Not checked yetcites Muller et al., 2015 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“For example, some melanoma, lymphoma, glioma, and prostate cancers reduce or lose the expression of the urea cycle enzyme argininosuccinate synthase 1 (ASS1) (Delage et al., 2010).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Loss of argininosuccinate synthase 1 expression
What the sources say
- Not checked yetcites Delage et al., 2010 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Familial cancer syndromes caused by fumarate hydratase (FH) or succinate dehydrogenase (SDH) deletion suggest that these TCA enzymes can behave as classical tumor suppressors.”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > FH and SDH loss in heritable cancer syndromes
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“but was found to be clinically ineffective in patients with advanced MTAP-deficient tumors in a Phase II trial (Kindler et al., 2009).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Metabolic collateral lethality
What the sources say
- Not checked yetcites Kindler et al., 2009 source
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Deletion of the tumor suppressor CDKN2A results in concomitant deletion of the methionine salvage pathway enzyme methylthioadenosine phosphorylase (MTAP) in many cancers, including 53% of glioblastomas and 26% of pancreatic cancers (Mavrakis et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Metabolic collateral lethality
What the sources say
- Not checked yetcites Mavrakis et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesThe paper states this without a source or data behind it here, so there is nothing to check it against. The quote shows it is in the paper.
In the paper
“Pharmacokinetic analyses confirming successful purine biosynthesis inhibition by doses of L-alanosine used in the study were not reported, so further exploration of why this approach failed may yield insight into how best to exploit MTAP deficiency.”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Metabolic collateral lethality
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“However, mitochondrial ATP production appears dispensable for many proliferating cells (Birsoy et al., 2015; Sullivan et al., 2015; Titov et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Differential requirements for NAD+/NADH homeostasis
What the sources say
Load-bearingStrength:hedged· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesA conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Several lines of evidence suggest that targeting de novo fatty acid synthesis might be effective in the treatment of some cancers.”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting de novo lipid synthesis
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“With the exception of liver, adipose tissue, and lactating breast, adult tissues do not synthesize fatty acids de novo under normal physiological conditions (Menendez and Lupu, 2006), so inhibition of de novo fatty acid synthesis might have an adequate therapeutic window.”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting de novo lipid synthesis
What the sources say
- Not checked yetcites Menendez and Lupu, 2006
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Respiration is also needed for tumor initiation, as tumor cells with impaired oxidative phosphorylation due to depletion of mitochondrial DNA (mtDNA) exhibit increased tumor latency upon subcutaneous transplantation.”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Differential requirements for NAD+/NADH homeostasis
What the sources say
- Not checked yetcites Tan et al., 2015a
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Genetic knockdown of ACC induces apoptosis in cancer cell lines (Brusselmans et al., 2005; Chajes et al., 2006), and an allosteric inhibitor of ACC, ND-646, has shown antitumor efficacy in autochthonous mouse lung tumor models (Svensson et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting de novo lipid synthesis
What the sources say
- Not checked yetcites Svensson et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Small-molecules targeting NAMPT can be effective anti-tumor agents in vitro and in xenograft cancer models (Nahimana et al., 2009; Tan et al., 2015b; Watson et al., 2009).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Differential requirements for NAD+/NADH homeostasis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Instead, respiration serves an alternative anabolic role for proliferating cells by regenerating the oxidized form of nicotinamide adenine dinucleotide (NAD+) from the reduced form (NADH) (Birsoy et al., 2015; Sullivan et al., 2015; Titov et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Differential requirements for NAD+/NADH homeostasis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“ACLY activity is elevated in cancers (Migita et al., 2008), and targeting ACLY genetically or chemically prevents xenograft tumor formation and proliferation (Adam et al., 2013; Bauer et al., 2005; Hatzivassiliou et al., 2005; Migita et al., 2008).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting de novo lipid synthesis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“ACLY activity is elevated in cancers (Migita et al., 2008), and targeting ACLY genetically or chemically prevents xenograft tumor formation and proliferation (Adam et al., 2013; Bauer et al., 2005; Hatzivassiliou et al., 2005; Migita et al., 2008).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting de novo lipid synthesis
What the sources say
- Not checked yetcites Migita et al., 2008 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“However, subsequent work determined that despite engaging in aerobic glycolysis, cancer cells consume oxygen at levels comparable to normal tissue (Weinhouse, 1956; Zu and Guppy, 2004).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Differential requirements for NAD+/NADH homeostasis
What the sources say
- Not checked yetcites Weinhouse, 1956 source
- Not checked yetcites Zu and Guppy, 2004
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“In clinical trials, use of these inhibitors as single agents has not caused tumor remission (von Heideman et al., 2010), but additional studies may uncover how best to safely use these drugs for patient benefit.”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Differential requirements for NAD+/NADH homeostasis
What the sources say
- Not checked yetcites von Heideman et al., 2010 source
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Although the precise mechanism of metformin action remains controversial (Luengo et al., 2014), recent work has shown that the anti-tumorigenic effect of metformin can at least be partially accounted for by direct mitochondrial complex I inhibition in tumors (Gui et al., 2016; Wheaton et al., 2014).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Differential requirements for NAD+/NADH homeostasis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Since then, numerous studies have identified de novo fatty acid biosynthesis as a key metabolic requirement for some cancers, and it has been dubbed by some as a distinct metabolic “hallmark of the transformed phenotype” (Kuhajda et al., 1994; Menendez and Lupu, 2006; Rohrig and Schulze, 2016).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting de novo lipid synthesis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“With the exception of liver, adipose tissue, and lactating breast, adult tissues do not synthesize fatty acids de novo under normal physiological conditions (Menendez and Lupu, 2006), so inhibition of de novo fatty acid synthesis might have an adequate therapeutic window.”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting de novo lipid synthesis
What the sources say
- Not checked yetcites Menendez and Lupu, 2006
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Cancer cells are also able to generate acetyl-CoA from cytosolic acetate (Comerford et al., 2014; Gao et al., 2016; Kamphorst et al., 2014; Mashimo et al., 2014).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting de novo lipid synthesis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesA conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“However, PRMT5 inhibitors in current clinical trials may not be effective in MTAP null cancers, in part because the high levels of MTA in these cells compete for binding of the inhibitors to the enzyme.”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Metabolic collateral lethality
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Genetic knockdown of ACC induces apoptosis in cancer cell lines (Brusselmans et al., 2005; Chajes et al., 2006), and an allosteric inhibitor of ACC, ND-646, has shown antitumor efficacy in autochthonous mouse lung tumor models (Svensson et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting de novo lipid synthesis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Metformin has also been found to cooperate with neo-adjuvant chemotherapy to result in complete tumor regression in some breast cancer patients (Jiralerspong et al., 2009).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Differential requirements for NAD+/NADH homeostasis
What the sources say
- Not checked yetcites Jiralerspong et al., 2009 source
Strength:plain· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“For example, eliminating environmental serine, limiting aspartate synthesis via mitochondrial inhibition, and ablating the mitochondrial folate pathway impairs purine biosynthesis (Ducker et al., 2016; Labuschagne et al., 2014; Sullivan et al., 2015).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting nucleotide acquisition and synthesis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Though nucleotide salvage pathways can support tumor cell proliferation in certain contexts (Tabata et al., 2017), concentrations of circulating nucleotides are likely too low for many tumors to satisfy their nucleotides demand via salvage alone (Traut, 1994).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting nucleotide acquisition and synthesis
What the sources say
- Not checked yetcites Traut, 1994 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“KRAS/LKB1-null lung cancer cells are more reliant on the urea cycle enzyme carbamoyl phosphate synthetase-1 (CPS1) for pyrimidine biosynthesis, although this dependency is independent of mTOR signaling (Kim et al., 2017).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting nucleotide acquisition and synthesis
What the sources say
- Not checked yetcites Kim et al., 2017 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Inhibitors of mutant IDH1 or IDH2 have been shown to induce differentiation in AML cells harboring mutant IDH (Okoye-Okafor et al., 2015; Wang et al., 2013).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Inducing differentiation in myeloid cells
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesA conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Together, these observations suggest that tissue-of-origin can influence metabolic requirements and vulnerabilities.”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Differential utilization of amino acids
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Acute lymphoblastic leukemia (ALL) and related lymphomas, however, are auxotrophic for asparagine (Neuman and McCoy, 1956).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Asparagine auxotrophy in acute lymphoblastic leukemia
What the sources say
- Not checked yetcites Neuman and McCoy, 1956
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesA conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“The absence of a genetic driver for asparagine auxotrophy, combined with the fact that L-asparaginase has little known clinical utility outside of the context of ALL, suggests that this metabolic vulnerability may be lineage dependent.”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Asparagine auxotrophy in acute lymphoblastic leukemia
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Activation of mTOR can increase ribose synthesis via the oxidative pentose phosphate pathway (Duvel et al., 2010) and enhance flux through the pyrimidine and purine synthesis pathways (Ben-Sahra et al., 2013; Ben-Sahra et al., 2016; Robitaille et al., 2013), suggesting that targeting nucleotide metabolism in tumor contexts with mTOR hyperactivation may be more effective.”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting nucleotide acquisition and synthesis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesA conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Thus, administering 5hmdC and 5fdC may selectively target tumors overexpressing CDA.”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting nucleotide acquisition and synthesis
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“In fact, genome-wide analysis has shown that there is no consistent gene expression pattern that dictates sensitivity to L-asparaginase (Fine et al., 2005).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Asparagine auxotrophy in acute lymphoblastic leukemia
What the sources say
- Not checked yetcites Fine et al., 2005 source
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Recently, it has been determined that mouse lung and pancreatic tumors exhibit differences in amino acid metabolism, even when harboring the same genetic lesion.”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Differential utilization of amino acids
What the sources say
- Not checked yetcites Mayers et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Recently, a myeloid cell screen involving HoxA9-enforced differentiation arrest found that inhibition of dihydroorotate dehydrogenase (DHODH), an enzyme in the pyrimidine biosynthesis pathway (Figure 1b), can induce differentiation (Sykes et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Inducing differentiation in myeloid cells
What the sources say
- Not checked yetcites Sykes et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“In fact, tumors retain many features that correspond to their parental normal tissue (Gaude and Frezza, 2016; Hu et al., 2013).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities
What the sources say
- Not checked yetcites Gaude and Frezza, 2016
- Not checked yetcites Hu et al., 2013
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Though the mechanism of asparagine auxotrophy in ALL cells was assumed to be genetically defined, studies have shown that clinical response to L-asparaginase treatment is independent of asparagine synthase (ASNS) expression, the enzyme that converts aspartate to asparagine (Figure 7) (Appel et al., 2006; Stams et al., 2003).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Asparagine auxotrophy in acute lymphoblastic leukemia
What the sources say
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Though nucleotide salvage pathways can support tumor cell proliferation in certain contexts (Tabata et al., 2017), concentrations of circulating nucleotides are likely too low for many tumors to satisfy their nucleotides demand via salvage alone (Traut, 1994).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting nucleotide acquisition and synthesis
What the sources say
- Not checked yetcites Tabata et al., 2017 source
Strength:plain· not yet calibratedCausal:conditional· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Cancer cells generally have increased levels of reactive metabolites (DeBerardinis and Chandel, 2016; Sullivan et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Increased requirement for detoxification of reactive metabolites
What the sources say
- Not checked yetcites DeBerardinis and Chandel, 2016
- Not checked yetcites Sullivan et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Tumors of other lineages are also dependent on BCAA transaminases, including some glioblastomas and blast crisis chronic myeloid leukemia (Hattori et al., 2017; Tonjes et al., 2013).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Differential utilization of amino acids
What the sources say
Strength:plain· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Inhibitors of this transporter have been found to deplete intracellular glutathione in cancer cells, resulting in iron-dependent accumulation of ROS and a form of cell death termed ferroptosis (Dixon et al., 2012; Dixon et al., 2014; Yang et al., 2014).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Increased requirement for detoxification of reactive metabolites
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Therapeutic interventions that decrease intracellular glutathione levels, such as administration of the oxidized form of vitamin C, dehydroascorbate (DHA), can result in cancer cell death and impaired tumor progression (Yun et al., 2015)”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Increased requirement for detoxification of reactive metabolites
What the sources say
- Not checked yetcites Yun et al., 2015 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“While elevation of reactive metabolites can support oncogenesis in some contexts (Arnold et al., 2001; Irani et al., 1997; Suh et al., 1999; Weinberg et al., 2010), at high levels reactive metabolites become toxic and kill cells due to the resulting damage to the proteome and genome (Karisch et al., 2011; Rabbani and Thornalley, 2014).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Increased requirement for detoxification of reactive metabolites
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“PTEN-deficient cells, which have active mTOR signaling, are more sensitive to inhibition of DHODH by brequinar and leflunomide (Mathur et al., 2017).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting nucleotide acquisition and synthesis
What the sources say
- Not checked yetcites Mathur et al., 2017 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“While elevation of reactive metabolites can support oncogenesis in some contexts (Arnold et al., 2001; Irani et al., 1997; Suh et al., 1999; Weinberg et al., 2010), at high levels reactive metabolites become toxic and kill cells due to the resulting damage to the proteome and genome (Karisch et al., 2011; Rabbani and Thornalley, 2014).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Increased requirement for detoxification of reactive metabolites
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“It has been reported that lactate produced by cancer-associated fibroblasts can enter the TCA cycle of cancer cells (Bonuccelli et al., 2014; Witkiewicz et al., 2012), and lactate produced in hypoxic regions of a tumor can fuel respiration in well-oxygenated tumor cells (Kennedy et al., 2013; Sonveaux et al., 2008).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Non-tumor cells can influence tumor cell metabolism
What the sources say
Strength:plain· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“It has been reported that lactate produced by cancer-associated fibroblasts can enter the TCA cycle of cancer cells (Bonuccelli et al., 2014; Witkiewicz et al., 2012), and lactate produced in hypoxic regions of a tumor can fuel respiration in well-oxygenated tumor cells (Kennedy et al., 2013; Sonveaux et al., 2008).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Non-tumor cells can influence tumor cell metabolism
What the sources say
- Not checked yetcites Kennedy et al., 2013 source
- Not checked yetcites Sonveaux et al., 2008
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIn the paper
“Importantly, cell lines derived from resistant lung tumors become sensitive to glutaminase inhibition in vitro, highlighting that environment can be a contributor to glutaminase sensitivity (Davidson et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Metabolic dependencies can be modulated by environment
What the sources say
- Not checked yetcites Davidson et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesA conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“There is growing evidence that metabolic dependencies in cancer are influenced by tissue environment, cancer lineage, as well as genetic events.”
§ Targeting Metabolism for Cancer Therapy > What Dictates Metabolic Dependencies?
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesNone of the sources cited for this claim have been checked yet.
In the paper
“Even among cancers where mutant IDH is an oncogenic driver, sensitivity to mutant IDH inhibitors appears to differ between leukemia and solid tumor models (Tateishi et al., 2015; Turcan et al., 2013).”
§ Targeting Metabolism for Cancer Therapy > What Dictates Metabolic Dependencies?
What the sources say
Strength:hedged· not yet calibratedCausal:correlational· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passes
- It may state two separate claims as one. 87
- Probably not a substantial claim. 3
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Chemotherapies targeting metabolism have been effective cancer treatments for decades, and the success of these therapies demonstrates that a therapeutic window exists to target malignant metabolism.”
§ Targeting Metabolism for Cancer Therapy > Abstract
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes? Based: unclearIt may state two separate claims as one.
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Metabolic reprogramming contributes to tumor development and introduces metabolic liabilities that can be exploited to treat cancer.”
§ Targeting Metabolism for Cancer Therapy > Abstract
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“More than thirty years preceding Farber’s work on antifolates, Otto Warburg reported that cancer cells consume tremendous amounts of glucose and metabolize the majority of the glucose into lactate, even in the presence of oxygen (Warburg, 1924).”
§ Targeting Metabolism for Cancer Therapy > Altered glucose metabolism
What the sources say
- Not checked yetcites Warburg, 1924 source
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Notably, many noncancerous tissues, including the brain, are FDG-PET avid (Berti et al., 2014; Cohade, 2010), illustrating that high glucose uptake is not a unique feature of tumors and offering a potential explanation for the relative lack of success in directly targeting glucose metabolism for cancer treatment.”
§ Targeting Metabolism for Cancer Therapy > Altered glucose metabolism
What the sources say
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“Aminopterin is the precursor of the currently used drugs methotrexate and pemetrexed, both of which are folate analogues that inhibit one-carbon transfer reactions required for de novo nucleotide synthesis (Figure 1, Figure 2a)(Walling, 2006).”
§ Targeting Metabolism for Cancer Therapy > Introduction
What the sources say
- Not checked yetcites Walling, 2006 source
Strength:plain· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✗ Load-bearing: fails✓ Based: passesProbably not a substantial claim. The paper’s conclusions may not depend on it. It may state two separate claims as one.
In the paper
“Notable examples include the purine analogues 6-mercaptopurine (6-MP) and 6-thioguanine (6-TG), which inhibit 5-phosphoribosyl-1-pyrophosphatase (PRPP) amidotransferase, the first enzyme in de novo purine biosynthesis (Figure 1a, Figure 2b). 6-MP and 6-TG have been successful in treating many cancers including childhood leukemia (Elion, 1989).”
§ Targeting Metabolism for Cancer Therapy > Introduction
What the sources say
- Not checked yetcites Elion, 1989 source
Strength:plain· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“The pyrimidine analogue 5-fluorouracil (5-FU) is a synthetic analogue of uracil that inhibits thymidylate synthase, limiting the availability of thymidine nucleotides for DNA synthesis (Figure 1b, Figure 2c). 5-FU and the related 5-FU-prodrug capecitabine remain widely used chemotherapies today and are an important treatment for gastrointestinal cancers (Heidelberger et al., 1957; Wagner et al., 2”
§ Targeting Metabolism for Cancer Therapy > Introduction
What the sources say
Strength:plain· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“A specific inhibitor of mutant IDH2, AG-221 (enasidenib) confers survival benefit in a mouse model of IDH2-mutant AML (Quivoron et al., 2014; Yen et al., 2017) and became the first compound targeting mutant IDH to enter clinical trials in 2014. Early results in IDH2-mutant AML patients have suggested enasidenib can provide clinical benefit (DiNardo et al., 2015; Stein et al., 2014), and this drug”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Oncogenic isocitrate dehydrogenase mutations
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Wild-type IDH1 and IDH2 catalyze the reversible oxidative decarboxylation of isocitrate to alpha-ketoglutarate (αKG) and CO2 (Figure 4a). Cancer associated mutations in IDH1 and IDH2 eliminate this function and confer a neomorphic activity to the enzyme, generating D-2-hydroxyglutarate (D-2HG) via the reduction of αKG (Figure 4b)(Dang et al., 2009; Ward et al., 2010).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Oncogenic isocitrate dehydrogenase mutations
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Despite success in some preclinical models and patients with AML, mutant IDH inhibitors may not be effective in all IDH-mutant cancers. For example, these drugs are unable to reverse epigenetic changes or inhibit tumor proliferation in many models of IDH mutant glioma, despite a robust ability to lower 2-HG in cells and tumors (Tateishi et al., 2015; Turcan et al., 2013).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Oncogenic isocitrate dehydrogenase mutations
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“2-DG is phosphorylated by hexokinase to produce 2-deoxyglucose-6-phosphate, which cannot be further metabolized by cells. It therefore accumulates intracellularly and competitively inhibits hexokinase to slow glucose uptake (Figure 3).”
§ Targeting Metabolism for Cancer Therapy > Altered glucose metabolism
What the sources say
- Not checked yetcites Wick et al., 1957 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“One of the first compounds reported was AGI-5198, which targets mutant IDH1. AGI-5198 reduces intratumoral D-2HG levels, induces expression of genes involved in glial cell differentiation, and suppresses growth of IDH1-mutant human glioma cells in a xenograft model (Rohle et al., 2013).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Oncogenic isocitrate dehydrogenase mutations
What the sources say
- Not checked yetcites Rohle et al., 2013 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“Although early clinical testing yielded responses in some patients, the use of this drug was limited by toxicity associated with hypoglycemia symptoms (Landau et al., 1958).”
§ Targeting Metabolism for Cancer Therapy > Altered glucose metabolism
What the sources say
- Not checked yetcites Landau et al., 1958
Strength:plain· not yet calibratedCausal:correlational· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“IDH1 mutations are early events in the development of glial cancer (Watanabe et al., 2009), raising the possibility that IDH mutations are important for tumor initiation, but accumulation of additional oncogenic mutations renders GBM tumors less dependent on constitutive expression of mutant IDH for tumor proliferation and progression (Johnson et al., 2014; Wakimoto et al., 2014).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Oncogenic isocitrate dehydrogenase mutations
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Recent clinical trials have revisited use of 2-DG at lower doses, but these doses are insufficient to inhibit disease progression (Raez et al., 2013; Stein et al., 2010).”
§ Targeting Metabolism for Cancer Therapy > Altered glucose metabolism
What the sources say
Strength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesIt may state two separate claims as one.
The paper states this without a source or data behind it here, so there is nothing to check it against. The quote shows it is in the paper.
In the paper
“However, antimetabolite drugs are only effective against a subset of cancer types. Many resistant cancers have the same mutational spectrum as sensitive cancers, and defining genetic predictors of chemotherapy response for most malignancies has been difficult.”
§ Targeting Metabolism for Cancer Therapy > Introduction
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Proliferating cells have different metabolic requirements from non-proliferating cells (Hsu and Sabatini, 2008; Lunt and Vander Heiden, 2011; Pavlova and Thompson, 2016). While non-proliferating cells have primarily catabolic demands, proliferating cells must balance the divergent catabolic and anabolic requirements of sustaining cellular homeostasis while duplicating cell mass, and thus engage in”
§ Targeting Metabolism for Cancer Therapy > Introduction
What the sources say
- Not checked yetcites Hsu and Sabatini, 2008
- Not checked yetcites Lunt and Vander Heiden, 2011 source
- Not checked yetcites Pavlova and Thompson, 2016
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
The paper states this without a source or data behind it here, so there is nothing to check it against. The quote shows it is in the paper.
In the paper
“Furthermore, the proliferation rates of normal cells are often greater than those of cancer cells (Vander Heiden and DeBerardinis, 2017), and prominent side effects of antimetabolite chemotherapy are caused by the destruction of normal rapidly proliferating cells. Myeloid suppression or gastrointestinal toxicity are often dose-limiting toxicities for these drugs.”
§ Targeting Metabolism for Cancer Therapy > Introduction
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Though it is found at low levels in normal cells, D-2HG can accumulate to millimolar levels in cancer cells expressing mutant IDH. At these high concentrations, D-2HG can inhibit αKG-dependent dioxygenases, including enzymes involved in histone and DNA demethylation (Chowdhury et al., 2011; Janke et al., 2017; Koivunen et al., 2012; Xu et al., 2011).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Oncogenic isocitrate dehydrogenase mutations
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“Other antimetabolite nucleoside analogues, such as gemcitabine and cytarabine, are incorporated into DNA, resulting in inhibition of DNA polymerases, and are commonly used to treat select cancers (Parker, 2009).”
§ Targeting Metabolism for Cancer Therapy > Introduction
What the sources say
- Not checked yetcites Parker, 2009 source
Strength:plain· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✗ Load-bearing: fails✓ Based: passesProbably not a substantial claim. The paper’s conclusions may not depend on it. It may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Increased PHGDH gene expression leads to greater production of serine from glucose and is associated with specific subsets of breast cancer, lung adenocarcinoma, and melanoma (Locasale et al., 2011; Possemato et al., 2011; Zhang et al., 2017).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Increased dependence on serine
What the sources say
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The paper states this without a source or data behind it here, so there is nothing to check it against. The quote shows it is in the paper.
In the paper
“One potent glutaminase inhibitor, CB-839, is currently being evaluated in cancer trials in patients (Table 1), although the exact disease context where glutaminase inhibition will be most effective remains an area of active investigation.”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Upregulated glutaminolysis
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In the paper
“and small-molecule inhibitors targeting PHGDH have been shown to inhibit serine synthesis and tumor proliferation in vitro and in xenograft cancer models (Mullarky et al., 2016; Pacold et al., 2016; Wang et al., 2017).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Increased dependence on serine
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
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In the paper
“Providing cells with αKG, oxaloacetate, or pyruvate is sufficient to rescue cancer cell proliferation in conditions of glutamine starvation, confirming that glutamine supports proliferation by replenishing depleted TCA cycle intermediates, a process termed anaplerosis (Altman et al., 2016; Weinberg et al., 2010; Yuneva et al., 2007).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Upregulated glutaminolysis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
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In the paper
“Glutamine is an important nitrogen donor for amino acids and nucleotides (Hosios et al., 2016), but glutamine uptake can exceed the nitrogen requirement of some cancer cells (DeBerardinis et al., 2007).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Upregulated glutaminolysis
What the sources say
Strength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesIt may state two separate claims as one.
In the paper
“However, PHGDH activity may not be a requirement for proliferation for all PHGDH-amplified cancers, as expression has been shown to be dispensable in a breast cancer xenograft model (Chen et al., 2013).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Increased dependence on serine
What the sources say
- Not checked yetcites Chen et al., 2013 source
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In the paper
“Serine can also contribute to NADPH production via the folate cycle, which serves to maintain redox homeostasis and support anabolic reactions (Fan et al., 2014; Lewis et al., 2014; Ye et al., 2014).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Increased dependence on serine
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Glutamine is a non-essential amino acid, and yet cancer cells proliferating in vitro consume glutamine far in excess of any other amino acid and are often dependent on extracellular glutamine for survival (DeBerardinis and Cheng, 2010; Eagle, 1955; Jain et al., 2012).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Upregulated glutaminolysis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“In certain contexts, MYC-transformed cancers become glutamine dependent and undergo apoptosis in the absence of glutamine (Yuneva et al., 2007).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Upregulated glutaminolysis
What the sources say
- Not checked yetcites Yuneva et al., 2007 source
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In the paper
“For example, tumors harboring an IDH mutation have increased sensitivity to hypomethylating agents (Turcan et al., 2013), electron transport chain inhibitors (Grassian et al., 2014), depletion of the coenzyme NAD+ (Tateishi et al., 2015) and chemoradiotherapy (Cairncross et al., 2014).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Oncogenic isocitrate dehydrogenase mutations
What the sources say
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In the paper
“MYC has been found to increase mRNA and protein levels of glutamine transporters as well as expression of the enzyme glutaminase, which catalyzes the first step in glutaminolysis (Gao et al., 2009; Wise et al., 2008; Yuneva et al., 2012).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Upregulated glutaminolysis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“However, some evidence suggests that inhibiting mutant IDH could confer resistance to some therapies, as inhibitors targeting mutant IDH1 can antagonize the effects of radiation therapy in glioma (Molenaar et al., 2015).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Oncogenic isocitrate dehydrogenase mutations
What the sources say
- Not checked yetcites Molenaar et al., 2015 source
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In the paper
“Clinical trials using glutamine analogues to treat cancers were initiated decades ago, but these trials were abandoned due to lack of efficacy and/or severe patient toxicity (Livingston et al., 1970; O’Dwyer et al., 1984). The absence of a therapeutic window for these studies can likely be attributed to fact that these drugs were relatively non-specific and a panoply of glutamine utilizing enzymes”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Upregulated glutaminolysis
What the sources say
- Not checked yetcites Livingston et al., 1970 source
- Not checked yetcites O’Dwyer et al., 1984
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In the paper
“More recently, it was found that increased expression of the serine synthesis enzyme phosphoglycerate dehydrogenase (PHGDH) in some cancers can result from copy number gain of a region on chromosome 1p (Beroukhim et al., 2010; Locasale et al., 2011; Possemato et al., 2011) or a consequence of oncogenic signaling, including NRF2 and ATF4 signaling (DeNicola et al., 2015), or hypoxia responses (Sam”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Increased dependence on serine
What the sources say
Strength:plain· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“However, inhibitors of PHGDH might have a limited therapeutic index, as de novo serine synthesis has an important physiological role in the central nervous system (Furuya, 2008) and PHGDH-deficient mice exhibit severe brain morphogenesis defects (Yoshida et al., 2004).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Increased dependence on serine
What the sources say
- Not checked yetcites Furuya, 2008
- Not checked yetcites Yoshida et al., 2004 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Increased activity of de novo serine synthesis enzymes in cancer has been observed for more than 30 years (Snell, 1984; Snell et al., 1988).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Increased dependence on serine
What the sources say
Strength:plain· not yet calibratedCausal:correlational· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✗ Load-bearing: fails✓ Based: passesProbably not a substantial claim. The paper’s conclusions may not depend on it.
None of the sources cited for this claim have been checked yet.
In the paper
“Additionally, succinate and fumarate inhibit the prolyl hydroxylase domain-containing (PHD) enzymes that regulate stability of hypoxia-inducible factors (HIFs), such that FH and SDH deficient cancers activate the hypoxic gene expression program even under normoxic conditions (Hewitson et al., 2007; Pollard et al., 2005; Selak et al., 2005).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > FH and SDH loss in heritable cancer syndromes
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“Removing serine from culture media limits incorporation of one-carbon units into nucleotides and impairs proliferation (Labuschagne et al., 2014).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Increased dependence on serine
What the sources say
- Not checked yetcites Labuschagne et al., 2014 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
The paper states this without a source or data behind it here, so there is nothing to check it against. The quote shows it is in the paper.
In the paper
“Loss of SDH also results in TCA cycle dysfunction, leading to the accumulation of succinate and depletion of aspartate, fumarate, citrate, and malate.”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > FH and SDH loss in heritable cancer syndromes
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In the paper
“L-alanosine inhibits conversion of inosine monophosphate (IMP) to AMP, and shows selective toxicity towards MTAP-null cancer cells (Batova et al., 1999; Efferth et al., 2003; Harasawa et al., 2002), but was found to be clinically ineffective in patients with advanced MTAP-deficient tumors in a Phase II trial (Kindler et al., 2009).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Metabolic collateral lethality
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Loss of MTAP expression can result in another vulnerability for cancer cells because the MTA that accumulates following MTAP loss can act as a potent inhibitor of the enzyme arginine methyltransferase 5 (PRMT5).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Metabolic collateral lethality
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Similarly, the gene encoding enolase 1 (ENO1) is on the tumor-suppressor locus 1p36, and undergoes homozygous deletion in 1–5% of GBM cancers. Knockdown of enolase 2 (ENO2) in ENO1-null GBM cells resulted in significant inhibition of proliferation and intracranial tumorigenesis, whereas ENO1 expressing cancer cells were insensitive to ENO2 ablation.”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Metabolic collateral lethality
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“Pancreatic ductal adenocarcinoma (PDAC) cells exhibiting homozygous deletion of the tumor suppressor SMAD4 often lose malic enzyme 2 (ME2) expression due to the chromosomal proximity of the two genes. Targeting the malic enzyme 3 (ME3) isoform was found to impair tumor proliferation of PDAC xenografts lacking ME2 expression, but had no effect on tumors with intact ME2 (Dey et al., 2017).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Metabolic collateral lethality
What the sources say
- Not checked yetcites Dey et al., 2017 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
The paper states this without a source or data behind it here, so there is nothing to check it against. The quote shows it is in the paper.
In the paper
“In this context, aspartate cannot be synthesized from glutamine or other sources of αKG, and aspartate production is dependent on pyruvate carboxylase (PC) activity.”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > FH and SDH loss in heritable cancer syndromes
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“A potential liability of ASS1 deficient cancers is that, like FH null cancers, they are unable to synthesize arginine de novo. As functional arginine auxotrophs, these cells are reliant on exogenous arginine for proliferation and survival and may be sensitive to therapies that lower arginine availability (Table 1).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Loss of argininosuccinate synthase 1 expression
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Both epigenetic changes and aberrant HIF activation can contribute to tumor initiation and progression in these cancers.”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > FH and SDH loss in heritable cancer syndromes
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“PC ablation impairs SDH-deficient cell proliferation and tumor formation, and thus targeting PC might be exploited to treat these types of cancers.”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > FH and SDH loss in heritable cancer syndromes
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“The high levels of fumarate resulting from FH deficiency drives argininosuccinate lyase (ASL) and argininosuccinate synthase (ASS1) in a direction that consumes arginine (Figure 7). Depletion of intracellular arginine causes these cells to become arginine auxotrophs (Adam et al., 2013; Zheng et al., 2013), and therapies that deplete exogenous arginine (Table 1) may be effective in treating malign”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > FH and SDH loss in heritable cancer syndromes
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Additionally, serine deprivation by dietary restriction is sufficient to slow growth of both xenograft (Gravel et al., 2014; Maddocks et al., 2013) and autochthonous cancer models, although efficacy of serine deprivation appears to be influenced by both the oncogenic driver mutation and tissue context (Maddocks et al., 2017).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Increased dependence on serine
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
The paper states this without a source or data behind it here, so there is nothing to check it against. The quote shows it is in the paper.
In the paper
“Loss of FH activity or SDH activity results in disruption of the TCA cycle and accumulation of fumarate or succinate, respectively.”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > FH and SDH loss in heritable cancer syndromes
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“MTAP deficient cells are more reliant on de novo purine synthesis to generate AMP, since they are unable to cleave MTA to salvage adenine, and thus MTAP loss makes cells more susceptible to inhibitors of purine biosynthesis as well as to methionine depletion (Hori et al., 1996).”
§ Targeting Metabolism for Cancer Therapy > Altered Metabolic Enzyme Expression > Metabolic collateral lethality
What the sources say
- Not checked yetcites Hori et al., 1996
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“In fact, cells derived from these tumors acquire host mtDNA to regain the ability to do respiration, providing compelling evidence that respiration is required and selected for in tumorigenesis (Tan et al., 2015a).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Differential requirements for NAD+/NADH homeostasis
What the sources say
- Not checked yetcites Tan et al., 2015a
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“For example, NAMPT inhibitors may be more effective in contexts of MYC-amplified glioblastoma (Tateishi et al., 2016) or when used in combination with other drugs known to deplete NAD+ pools (Bajrami et al., 2012; Chan et al., 2014).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Differential requirements for NAD+/NADH homeostasis
What the sources say
Strength:hedged· not yet calibratedCausal:conditional· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesIt may state two separate claims as one.
In the paper
“However, acetate is not always abundant in blood and is not the predominate source of acetyl-CoA used for fatty acid synthesis in some cells (Hosios and Vander Heiden, 2014).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting de novo lipid synthesis
What the sources say
- Not checked yetcites Hosios and Vander Heiden, 2014
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“It was first discovered in the 1950s that tumors are able to synthesize lipids, and a subsequent study determined that the large majority of lipids in tumors cells are synthesized de novo, rather being consumed from exogenous sources (Medes et al., 1953; Ookhtens et al., 1984).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting de novo lipid synthesis
What the sources say
- Not checked yetcites Medes et al., 1953
- Not checked yetcites Ookhtens et al., 1984
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Moreover, inhibitors of cellular respiration block proliferation, suggesting that most cancer cells require respiration in order to proliferate (Harris, 1980; Howell and Sager, 1979; Kroll et al., 1983; Loffer and Schneider, 1982; Zhang et al., 2014b).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Differential requirements for NAD+/NADH homeostasis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Some cancers are nevertheless dependent on expression of acetyl-CoA synthetase 2 (ACSS2), the cytosolic enzyme that allows cells to synthesize acetyl-CoA from acetate, making this represents a potential therapeutic target (Comerford et al., 2014; Schug et al., 2015).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting de novo lipid synthesis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Consistent with this notion, other complex I inhibitors have shown efficacy as anti-tumor agents (Appleyard et al., 2012; Schockel et al., 2015) and may show selective toxicity against oncogene-ablation resistant cells (Viale et al., 2014) and cancer stem cells (Sancho et al., 2015).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Differential requirements for NAD+/NADH homeostasis
What the sources say
Strength:hedged· not yet calibratedCausal:conditional· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“However, metformin, one of the commonly prescribed drugs for treating type II diabetes, is safe despite acting as a mitochondrial complex I inhibitor that impairs respiration (Bridges et al., 2014; El-Mir et al., 2000; Owen et al., 2000; Wheaton et al., 2014).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Differential requirements for NAD+/NADH homeostasis
What the sources say
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Furthermore, retrospective clinical studies have found that metformin use is associated with improved cancer outcomes, reductions in cancer incidence, and decreased cancer mortality (Evans et al., 2005; Franciosi et al., 2013; Gandini et al., 2014; Lee et al., 2012; Noto et al., 2012).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Differential requirements for NAD+/NADH homeostasis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“Proliferating cells often require a high NAD+/NADH ratio to support anabolic reactions, and in some contexts the NAD+/NADH ratio directly correlates with proliferation rate (Gui et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Differential requirements for NAD+/NADH homeostasis
What the sources say
- Not checked yetcites Gui et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“Targeting FASN has been found to reduce palmitoylation of tubulin and disrupt microtubule organization, inhibiting tumor cell growth (Heuer et al., 2017).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting de novo lipid synthesis
What the sources say
- Not checked yetcites Heuer et al., 2017 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
The paper states this without a source or data behind it here, so there is nothing to check it against. The quote shows it is in the paper.
In the paper
“Higher NAD+/NADH ratios appear important for proliferation while lower ratios favor mitochondrial ATP production.”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Differential requirements for NAD+/NADH homeostasis
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“The compound TVB-2640 is the first compound targeting FASN to enter clinical trials (Table 1), and when combined with paclitaxel, can cause partial responses or prolonged stable disease (Brenner et al., 2017).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting de novo lipid synthesis
What the sources say
- Not checked yetcites Brenner et al., 2017 source
Strength:plain· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesIt may state two separate claims as one.
In the paper
“Lung tumors support their nitrogen requirement by catabolizing free branched chain amino acids (BCAA), whereas pancreatic tumors expressing the same driver mutation do not.”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Differential utilization of amino acids
What the sources say
- Not checked yetcites Mayers et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Analysis of gene expression across different cancer types has determined that metabolic enzyme expression is heterogeneous across tumors, and there is no universal metabolic transformation common to all cancers.”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities
What the sources say
- Not checked yetcites Gaude and Frezza, 2016
- Not checked yetcites Hu et al., 2013
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“Targeting DHODH depletes uridine and downstream metabolites, and providing uridine is sufficient to maintain myeloid arrest, even in the presence of compounds targeting DHODH.”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Inducing differentiation in myeloid cells
What the sources say
- Not checked yetcites Sykes et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“The transcription factor HoxA9 is overexpressed in 70% of AML cases, and overexpression of this transcription factor alone is sufficient to immortalize murine bone marrow derived myeloid cells (Ayton and Cleary, 2003; Golub et al., 1999; Kroon et al., 1998).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Inducing differentiation in myeloid cells
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Activation of mTOR can increase ribose synthesis via the oxidative pentose phosphate pathway (Duvel et al., 2010) and enhance flux through the pyrimidine and purine synthesis pathways (Ben-Sahra et al., 2013; Ben-Sahra et al., 2016; Robitaille et al., 2013), suggesting that targeting nucleotide metabolism in tumor contexts with mTOR hyperactivation may be more effective.”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting nucleotide acquisition and synthesis
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“For example, the transcription factor Nrf2, which mediates an antioxidant response program to detoxify ROS, is downstream of several oncogenic drivers, and loss of Nrf2 in this context can impair tumor proliferation (Chio et al., 2016; DeNicola et al., 2011).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Increased requirement for detoxification of reactive metabolites
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Several screens for small-molecules that selectively kill transformed cells have identified compounds that reduce glutathione levels (Dolma et al., 2003; Raj et al., 2011; Trachootham et al., 2006), and genetic or pharmacological inhibition of glutathione synthesis results in ROS accumulation and impedes cancer initiation and cell proliferation (Harris et al., 2015; Lien et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Increased requirement for detoxification of reactive metabolites
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“Many cancer cells are auxotrophic for this amino acid, and lowering whole body cysteine levels with bacterial cysteineases is a potential cancer treatment being evaluated in clinical trials (Graczyk-Jarzynka et al., 2017).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Increased requirement for detoxification of reactive metabolites
What the sources say
- Not checked yetcites Graczyk-Jarzynka et al., 2017 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“Targeting BCAA transaminases inhibits lung tumor formation better than pancreatic tumor formation, suggesting that dependence on branched chain amino acid catabolism is determined by cell lineage rather than tumor site (Mayers et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Differential utilization of amino acids
What the sources say
- Not checked yetcites Mayers et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“Conversely, inhibiting oncogenic signaling using PI3K inhibitors, has been found to deplete DNA nucleotides, decrease DNA synthesis, and cause DNA damage (Juvekar et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Targeting nucleotide acquisition and synthesis
What the sources say
- Not checked yetcites Juvekar et al., 2016 source
Strength:plain· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesIt may state two separate claims as one.
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Disruption of this and other detoxification pathways is predicted to have a more deleterious effect on cancer cells than normal cells, and thus serves as a potential targetable metabolic liability.”
§ Targeting Metabolism for Cancer Therapy > Emerging Metabolic Targets > Increased requirement for detoxification of reactive metabolites
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“L-asparaginase has been found to be effective in the treatment of ALL and is included in standard chemotherapy regimens for this disease (Table 1)(Egler et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Asparagine auxotrophy in acute lymphoblastic leukemia
What the sources say
- Not checked yetcites Egler et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“However, these analyses suggest that metabolic vulnerabilities may not be universal across all cancers and highlight the possibility that some metabolic dependencies of cancer may be modulated by environment or defined by tumor lineage.”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
The paper states this without a source or data behind it here, so there is nothing to check it against. The quote shows it is in the paper.
In the paper
“The protein targets of methotrexate and 5-FU are present in almost all cancers, but the efficacy of these drugs varies dramatically across malignancies.”
§ Targeting Metabolism for Cancer Therapy > What Dictates Metabolic Dependencies?
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes? Based: unclearIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“For example, while targeting ACC to limit fatty synthesis can suppress lung tumor progression in some models (Svensson et al., 2016), loss of ACC activity can accelerate tumor growth in other cancer models (Jeon et al., 2012).”
§ Targeting Metabolism for Cancer Therapy > What Dictates Metabolic Dependencies?
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“Altering culture media conditions is sufficient to change cancer cell sensitivity to metformin, highlighting the importance of environment in modulating metabolic dependencies.”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Metabolic dependencies can be modulated by environment
What the sources say
- Not checked yetcites Gui et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“Treatment with brequinar sodium (BRQ), an inhibitor of DHODH that is approved to treat autoimmune disease, is able to overcome myeloid differentiation blockade and reduces leukemic cell burden in patient-derived xenografts and syngeneic mouse AML models of diverse genetic subtypes.”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Inducing differentiation in myeloid cells
What the sources say
- Not checked yetcites Sykes et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Cancer tissue-of-origin has served as a successful way to select patients for chemotherapies targeting metabolism for decades, and environment can also influence the efficacy of drugs targeting DHODH, mitochondrial complex I, and glutaminase (Davidson et al., 2016; Gui et al., 2016; Marin-Valencia et al., 2012; Sellers et al., 2015; Sykes et al., 2016; Tardito et al., 2015).”
§ Targeting Metabolism for Cancer Therapy > What Dictates Metabolic Dependencies?
What the sources say
Strength:plain· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesIt may state two separate claims as one.
In the paper
“Intraoperative isotopically-labeled glucose infusions performed on non-small cell lung cancer patients revealed higher contribution of glucose carbon to TCA intermediates than glycolytic intermediates in tumors, leading the authors to conclude that lactate could serve as an anaplerotic substrate in this context as well (Hensley et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Non-tumor cells can influence tumor cell metabolism
What the sources say
- Not checked yetcites Hensley et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Similarly, many PHGDH-amplified tumors and cell lines are sensitive to genetic or pharmacological inhibition of the enzyme (Locasale et al., 2011; Mullarky et al., 2016; Pacold et al., 2016; Possemato et al., 2011; Wang et al., 2017; Zhang et al., 2017), but for some tumor models PHGDH expression can be dispensable for growth (Chen et al., 2013).”
§ Targeting Metabolism for Cancer Therapy > What Dictates Metabolic Dependencies?
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“Glutamine tracing studies have demonstrated that in some tumor tissues, glutamine contributes minimally to TCA cycle intermediates, and those cancers can be resistant to glutaminase inhibition (Davidson et al., 2016; Hensley et al., 2016; Marin-Valencia et al., 2012; Sellers et al., 2015; Tardito et al., 2015).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Metabolic dependencies can be modulated by environment
What the sources say
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“Lactate utilization by tumors is dependent on monocarboxylate transporters (MCTs) (Figure 3), which are highly expressed in a variety of tumors (Pinheiro et al., 2012).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Non-tumor cells can influence tumor cell metabolism
What the sources say
- Not checked yetcites Pinheiro et al., 2012 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
In the paper
“Pancreatic ductal adenocarcinoma cells can consume alanine produced by pancreatic stellate cells in vitro, and the secreted alanine appears to help promote tumor cell proliferation and survival under nutrient-limited conditions (Sousa et al., 2016).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Non-tumor cells can influence tumor cell metabolism
What the sources say
- Not checked yetcites Sousa et al., 2016 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
None of the sources cited for this claim have been checked yet.
In the paper
“BRQ was previously evaluated to treat advanced solid tumors but was not shown to be effective in clinical trials (Arteaga et al., 1989; Noe et al., 1990; Peters et al., 1990).”
§ Targeting Metabolism for Cancer Therapy > Lineage and Environment Specific Vulnerabilities > Inducing differentiation in myeloid cells
What the sources say
- Not checked yetcites Arteaga et al., 1989
- Not checked yetcites Noe et al., 1990
- Not checked yetcites Peters et al., 1990 source
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“pro-fibrotic macrophages commonly coordinate scar formation via a range of interactions with fibroblasts, the major cellular source of pathological extracellular matrix deposition during fibrosis18,27,74–78.”
From Fibrosis: from mechanisms to medicines (2020) · cites this paper as [75]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
Warburg-to-Farber interval is 23 years, not over 30
MinorThe introduction dates Farber's discovery to 1947 and Warburg's report to 1924. The interval is 23 years, not more than thirty.
Reported 30 · recomputed 23
“More than thirty years preceding Farber’s work on antifolates, Otto Warburg reported that cancer cells consume tremendous amounts of glucose and metabolize the majority of the glucose into lactate, even in the presence of oxygen (Warburg, 1924).”
Citations
Cites
2 retracted
Selective killing of cancer cells by a small molecule targeting the stress response to ROS
Raj, L., Ide, T., Gurkar, A. U., Foley, M. A., Schenone, M., Li, X., Tolliday, N. J., Golub, T. R., Carr, S. A., Shamji, A. F., et al. (2011) · Nature · doi:10.1038/nature10167 · Cited by 1,040
RetractedSamanta, D., Park, Y., Andrabi, S. A., Shelton, L. M., Gilkes, D. M., & Semenza, G. L. (2016) · Cancer Research · doi:10.1158/0008-5472.can-16-0530 · Cited by 242
RetractedFerroptosis: An Iron-Dependent Form of Nonapoptotic Cell Death
Dixon, S. J., Lemberg, K. M., Lamprecht, M. R., Skouta, R., Zaitsev, E. M., Gleason, C. E., Patel, D. N., Bauer, A. J., Cantley, A. M., Yang, W. S., et al. (2012) · Cell · doi:10.1016/j.cell.2012.03.042 · Cited by 18,691
Warburg, O. (1956) · Science · doi:10.1126/science.123.3191.309 · Cited by 13,425
Golub, T. R., Slonim, D. K., Tamayo, P., Huard, C., Gaasenbeek, M., Mesirov, J. P., Coller, H., Loh, M. L., Downing, J. R., Caligiuri, M. A., et al. (1999) · Science · doi:10.1126/science.286.5439.531 · Cited by 11,516
Regulation of Ferroptotic Cancer Cell Death by GPX4
Yang, W. S., SriRamaratnam, R., Welsch, M. E., Shimada, K., Skouta, R., Viswanathan, V. S., Cheah, J. H., Clemons, P. A., Shamji, A. F., Clish, C. B., et al. (2014) · Cell · doi:10.1016/j.cell.2013.12.010 · Cited by 7,713
The emerging hallmarks of cancer metabolism
Pavlova, N. N., & Thompson, C. B. (2016) · Cell Metabolism · doi:10.1016/j.cmet.2015.12.006 · Cited by 5,926 · cited 1×
“Proliferating cells have different metabolic requirements from non-proliferating cells (Hsu and Sabatini, 2008; Lunt and Vander Heiden, 2011; Pavlova and Thompson, 2016).”
BackgroundIDH1 and IDH2 Mutations in Gliomas
Yan, H., Parsons, D. W., Jin, G., McLendon, R., Rasheed, B. A., Yuan, W., Kos, I., Batinic-Haberle, I., Jones, S., Riggins, G. J., et al. (2009) · New England Journal of Medicine · doi:10.1056/nejmoa0808710 · Cited by 5,847
Cancer-associated IDH1 mutations produce 2-hydroxyglutarate
Dang, L., White, D. W., Gross, S., Bennett, B. D., Bittinger, M. A., Driggers, E. M., Fantin, V. R., Jang, H. G., Jin, S., Keenan, M. C., et al. (2009) · Nature · doi:10.1038/nature08617 · Cited by 4,154
The landscape of somatic copy-number alteration across human cancers
Beroukhim, R., Mermel, C. H., Porter, D., Wei, G., Raychaudhuri, S., Donovan, J., Barretina, J., Boehm, J. S., Dobson, J., Urashima, M., et al. (2010) · Nature · doi:10.1038/nature08822 · Cited by 4,017
Flagged first, then by citations
11 of the 292 references couldn’t be matched to a known paper.
Cited by
Sorted by citations
Fibrosis: from mechanisms to medicines
Henderson, N. C., Rieder, F., & Wynn, T. A. (2020) · Nature · doi:10.1038/s41586-020-2938-9 · Cited by 1,868
Metabolic regulation of cell growth and proliferation
Zhu, J., & Thompson, C. B. (2019) · Nature Reviews Molecular Cell Biology · doi:10.1038/s41580-019-0123-5 · Cited by 1,154
mTOR signalling and cellular metabolism are mutual determinants in cancer
Mossmann, D., Park, S., & Hall, M. N. (2018) · Nature reviews. Cancer · doi:10.1038/s41568-018-0074-8 · Cited by 1,088
Lipid metabolism reprogramming and its potential targets in cancer
Cheng, C., Geng, F., Cheng, X., & Guo, D. (2018) · 癌症:英文版 · doi:10.1186/s40880-018-0301-4 · Cited by 880
Cuproptosis: mechanisms and links with cancers
Xie, J., Yang, Y., Gao, Y., & He, J. (2023) · Molecular Cancer · doi:10.1186/s12943-023-01732-y · Cited by 843
Metadata
- Authors
- Luengo, A., Gui, D. Y., & Vander Heiden, M. G.
- Affiliations
- Koch Institute for Integrative Cancer Research At MIT (US)
- Venue
- Cell Chemical Biology
- Publisher
- Elsevier BV
- Published
- 2017-09
- Volume
- 24
- Issue
- 9
- Pages
- 1161-1180
- ISSN
- 2451-9448 (ISSN-L)
- 2451-9456
- PMC
- PMC5744685
- OpenAlex
- W2758067903
- Cited by
- 971
- References
- 292
- Citations by year
- 2026: 46 · 2025: 81 · 2024: 111 · 2023: 130 · 2022: 194 · 2021: 161 · 2020: 141 · 2019: 80 · 2018: 24 · 2017: 2
- FWCI
- 6.94
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Cell chemical biology (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- Funders
- Lustgarten Foundation
- SU2C
- Ludwig Center
- NCI
- HHMI
- Ludwig Center for Molecular Oncology
- NSF (GRFP DGE-1122374)
- NIH (T32 GM007753)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › Cancer, Hypoxia, and Metabolism
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Metabolism, Diabetes, and Cancer
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › Cancer, Lipids, and Metabolism
- Keywords
- cancer metabolism, metabolic reprogramming, metabolic cancer therapy, metabolic liability
- MeSH terms
- Antimetabolites, Argininosuccinate Synthase, Fatty Acids, Glutamine, Glycolysis, Humans, Isocitrate Dehydrogenase, NAD, Neoplasms, Carbohydrate Metabolism, Metabolic Engineering
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
A language model drew the claims from the paper on 2026-10-06, under version 3 of the claim definition (model deepseek-v4.1-flash, prompt extract-v3).
A second model labelled each claim on 2026-10-06 (model jev-1.13-20260917, definition revision gold-guideline-v0.2).
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
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